BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007396
(605 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/605 (70%), Positives = 517/605 (85%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
M RTSVLHQ+ +L E+PP+ PEL+ +L E+EC+++LK C N+EEFK+ HA +LK G F
Sbjct: 1 MIRTSVLHQTHVLVSREDPPQSPELSFKLGEKECVSLLKKCSNMEEFKQSHARILKLGLF 60
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
+ FCASNLVATCALS WGSMDYACSIFRQ+DE G+F FNT++RG VK++ EEAL Y
Sbjct: 61 GDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMMRGHVKDMNTEEALITYK 120
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
EM ERGV+PDNFT+P L KACA+L A++EGMQ+H H+ K+G E D+FVQNSLI+MYGKC
Sbjct: 121 EMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKCG 180
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
++ A+F+QM+++SVASWSA+I AHAS G+WS+CL+L G+M+NE WR EESILVSVL
Sbjct: 181 EIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDMSNEGYWRAEESILVSVL 240
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SACTHLGALDLG+ HG L+RN+S LNVIVETSLI+MY+KCG L KG+CLF+ MA K +L
Sbjct: 241 SACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKL 300
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+YSVMISGLAMHG G+E L IF+EML +GLEPDD+VYVGVL+ACSHAGLV EGL CF+RM
Sbjct: 301 SYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRM 360
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
KLE+ I PT+QHYGC+VDLMGRAG + EALELI+SMP++ NDV+WRSLLSASKVH+NL+
Sbjct: 361 KLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQA 420
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GEIAAK LF+++S SDYV+LSNMYA+AQRW DVAK RT M SKGL+Q PGFSLVEV R
Sbjct: 421 GEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKR 480
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
K+++FVSQD HP +++YEM++QMEWQLKFEGYSPD +QVL DVDE+EK++RL GHSQK
Sbjct: 481 KMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYSPDTTQVLCDVDEEEKKQRLSGHSQK 540
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIA+ALIH SQGSPIRI RNLRMCNDCHTYTKLIS+I++REI VRDR RFH FKDG CS
Sbjct: 541 LAIAYALIHTSQGSPIRIVRNLRMCNDCHTYTKLISIIFDREITVRDRHRFHHFKDGACS 600
Query: 601 CRDYW 605
CRDYW
Sbjct: 601 CRDYW 605
>gi|356496056|ref|XP_003516886.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/605 (70%), Positives = 510/605 (84%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
M+ TSVL QS LL+ P PP+ ELN + EQ L++LK CK++EEFK+VHAH+LK G F
Sbjct: 1 MSGTSVLCQSHLLSLPNSPPQSSELNAKFNEQGWLSLLKRCKSMEEFKQVHAHILKLGLF 60
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
++ FC SNLVA+CALS WGSM+YACSIF QI+EPG+F++NT+IRG V ++ EEAL LY
Sbjct: 61 YDSFCGSNLVASCALSRWGSMEYACSIFSQIEEPGSFEYNTMIRGNVNSMDLEEALLLYV 120
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
EM ERG+EPDNFT+P + KAC+ L ALKEG+QIH HVFK G E D+FVQN LI+MYGKC
Sbjct: 121 EMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCG 180
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+E A +F+QMD+KSVASWS+II AHAS +W ECL L G+M+ E R EESILVS L
Sbjct: 181 AIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSAL 240
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SACTHLG+ +LG+C HG L+RNIS LNV+V+TSLIDMYVKCG LEKGLC+F+ MA K +
Sbjct: 241 SACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRY 300
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+Y+VMI+GLA+HG+G+EA+ +FS+ML EGL PDDVVYVGVLSACSHAGLVNEGL CF+RM
Sbjct: 301 SYTVMIAGLAIHGRGREAVRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVNEGLQCFNRM 360
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ E+ I PT+QHYGC+VDLMGRAGML EA +LI+SMPI+ NDVVWRSLLSA KVHHNLEI
Sbjct: 361 QFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEI 420
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GEIAA+N+F++N H+P DY++L+NMYARA++W +VA+IRTEMA K L Q+PGFSLVE R
Sbjct: 421 GEIAAENIFRLNKHNPGDYLVLANMYARAKKWANVARIRTEMAEKHLVQTPGFSLVEANR 480
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
VYKFVSQD+S P + IY+MI QMEWQLKFEGY+PD+SQVL DVDEDEKR+RLK HSQK
Sbjct: 481 NVYKFVSQDKSQPICETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQK 540
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAFALI S+GSPIRI+RNLRMCNDCHTYTK ISVIYEREI VRDR RFH FKDGTCS
Sbjct: 541 LAIAFALIQTSEGSPIRISRNLRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCS 600
Query: 601 CRDYW 605
C+DYW
Sbjct: 601 CKDYW 605
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/562 (75%), Positives = 490/562 (87%), Gaps = 3/562 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+EEFK+VHA VLKW N FCASNLVATCALS WGSMDYACSIFRQID+PG F+FNT+I
Sbjct: 1 MEEFKQVHAQVLKWE---NSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMI 57
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
RG+V + E ALFLY EM ERGVE DNFT+PALFKACA L++++EGMQIHG++FK G E
Sbjct: 58 RGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGLE 117
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFVQNSLINMYGKC K+E + ++F+ MD++ VASWSAIIAAHAS G+WSECL +FGEM
Sbjct: 118 GDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFGEM 177
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ E RPEESILVSVLSACTHLGALDLG+CTH +L+RNI +NVIV+TSLIDMYVKCGC
Sbjct: 178 SREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGC 237
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+EKGL LF+ M K QL+YSVMI+GLAMHG+G EAL +FS+ML EGL+PDDVVY+GVLSA
Sbjct: 238 IEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSA 297
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C+HAGLV+EGL CF+RMKLE+ I PT+QHYGC+V LMGRAGML +ALE I+SMPI+ N+V
Sbjct: 298 CNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEV 357
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
VWR LLSA K HHNLEIGEIAAK+L ++NS +P DYV+LSNMYARA+RW DVAKIRTEMA
Sbjct: 358 VWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMA 417
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
KG Q+PGFSLV+V RK+YKFVSQD SHP +YEMIHQMEWQLKFEGYSPD SQVL
Sbjct: 418 RKGFTQTPGFSLVQVERKIYKFVSQDMSHPQCKGMYEMIHQMEWQLKFEGYSPDTSQVLF 477
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
DVDE+EKR+RLK HSQKLA+AFALIH SQG+PIRIARNLRMCNDCHTYTKLISVIY+REI
Sbjct: 478 DVDEEEKRQRLKAHSQKLAMAFALIHTSQGAPIRIARNLRMCNDCHTYTKLISVIYQREI 537
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
VRDR RFH FKDGTCSCRDYW
Sbjct: 538 TVRDRNRFHHFKDGTCSCRDYW 559
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 7/221 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ K C +++EE ++H ++ K G + F ++L+ G ++ +CS+F +D
Sbjct: 90 ALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINM--YGKCGKIELSCSVFEHMD 147
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGM 151
++ +I + E L ++ EM G P+ ++ AC L AL G
Sbjct: 148 RRDVASWSAIIAAHASLGMWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGR 207
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
H + + E ++ VQ SLI+MY KC +E ++F++M +K+ S+S +I A +G
Sbjct: 208 CTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHG 267
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
E L++F +M E +P++ + + VLSAC H G +D G
Sbjct: 268 RGMEALQVFSDMLEEG-LKPDDVVYLGVLSACNHAGLVDEG 307
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/605 (69%), Positives = 504/605 (83%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
M+ TSVL QS LL+ P P + ELN + EQ L++LK CK++EEFKKVHAH+LK G F
Sbjct: 1 MSGTSVLCQSHLLSLPNSPLQSSELNAKFNEQGWLSLLKRCKSMEEFKKVHAHILKLGLF 60
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
++ FC SNLVA+CALS WGSM+YACSIFRQI+EPG+F++NT+IRG V ++ EEAL LY
Sbjct: 61 YDSFCGSNLVASCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMDLEEALLLYV 120
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
EM ERG+EPDNFT+P + KAC+ L ALKEG+QIH HVF G E D+FVQN LI+MYGKC
Sbjct: 121 EMLERGIEPDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCG 180
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+E A +F+QMD+KSVASWS+II AHAS +W ECL L G+M+ E R EESILVS L
Sbjct: 181 AIEHAGVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSREGRHRAEESILVSAL 240
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SACTHLG+ +LG+C HG L+RNIS LNV+V+TSLIDMYVKCG LEKGLC+F+ MA K +
Sbjct: 241 SACTHLGSPNLGRCIHGILLRNISELNVVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRY 300
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+Y+VMI+GLA+HG+G+EAL +FS+ML EGL PDDVVYVGVLSACSHAGLV EG CF+RM
Sbjct: 301 SYTVMIAGLAIHGRGREALRVFSDMLEEGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRM 360
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ E+ I PT+QHYGC+VDLMGRAGML EA +LI+SMPI+ NDVVWRSLLSA KVHHNLEI
Sbjct: 361 QFEHMIKPTIQHYGCMVDLMGRAGMLKEAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEI 420
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GEIAA N+F++N H+P DY++L+NMYARAQ+W +VA+IRTEM K L Q+PGFSLVE R
Sbjct: 421 GEIAADNIFKLNKHNPGDYLVLANMYARAQKWANVARIRTEMVEKNLVQTPGFSLVEANR 480
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
VYKFVSQD+S P + IY+MI QMEWQLKFEGY+PD+SQVL DVDEDEKR+RLK HSQK
Sbjct: 481 NVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQK 540
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAFALI S+GSP+RI+RNLRMCNDCHTYTK ISVIYEREI VRD RFH FKDGTCS
Sbjct: 541 LAIAFALIQTSEGSPVRISRNLRMCNDCHTYTKFISVIYEREITVRDSNRFHHFKDGTCS 600
Query: 601 CRDYW 605
C+DYW
Sbjct: 601 CKDYW 605
>gi|356529748|ref|XP_003533450.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 604
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/605 (70%), Positives = 506/605 (83%), Gaps = 1/605 (0%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
M+ TSVL QS L+ P PP+ ELN + Q L++LK CK++EEFK+VHAH+LK G F
Sbjct: 1 MSWTSVLCQSHFLSLPNNPPQSSELNAKFNVQG-LSLLKRCKSMEEFKQVHAHILKLGLF 59
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
++ FC SNLVATCALS WGSM+YACSIFRQI+EPG+F++NT+IRG V + EEAL LY
Sbjct: 60 YDSFCGSNLVATCALSRWGSMEYACSIFRQIEEPGSFEYNTMIRGNVNSMNLEEALLLYV 119
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
EM ERG+EPDNFT+P + KAC+ L ALKEG+QIH HVFK G E D+FVQN LINMYGKC
Sbjct: 120 EMLERGIEPDNFTYPFVLKACSLLGALKEGVQIHAHVFKAGLEGDVFVQNGLINMYGKCG 179
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+E AS +F+QMD+KSVASWS+II AHAS +W ECL L G+M+ E R EESILVS L
Sbjct: 180 AIEHASVVFEQMDEKSVASWSSIIGAHASVEMWHECLMLLGDMSGEGRHRAEESILVSAL 239
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SACTHLG+ + G+C HG L+RNIS LNV V+TSLIDMYVK G LEKGLC+F+ MA K +
Sbjct: 240 SACTHLGSPNFGRCIHGILLRNISELNVAVKTSLIDMYVKSGSLEKGLCVFQNMAQKNRY 299
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+Y+V+I+GLA+HG+G+EALS+FS+ML EGL PDDVVYVGVLSACSHAGLVNEGL CF+R+
Sbjct: 300 SYTVIITGLAIHGRGREALSVFSDMLEEGLAPDDVVYVGVLSACSHAGLVNEGLQCFNRL 359
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ E++I PT+QHYGC+VDLMGRAGML A +LI+SMPI+ NDVVWRSLLSA KVHHNLEI
Sbjct: 360 QFEHKIKPTIQHYGCMVDLMGRAGMLKGAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEI 419
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GEIAA+N+F++N H+P DY++L+NMYARA++W DVA+IRTEMA K L Q+PGFSLVE R
Sbjct: 420 GEIAAENIFKLNQHNPGDYLVLANMYARAKKWADVARIRTEMAEKHLVQTPGFSLVEANR 479
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
VYKFVSQD+S P + IY+MI QMEWQLKFEGY+PD+SQVL DVDEDEKR+RLK HSQK
Sbjct: 480 NVYKFVSQDKSQPQCETIYDMIQQMEWQLKFEGYTPDMSQVLLDVDEDEKRQRLKHHSQK 539
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAFALI S+GS IRI+RN+RMCNDCHTYTK ISVIYEREI VRDR RFH FKDGTCS
Sbjct: 540 LAIAFALIQTSEGSRIRISRNIRMCNDCHTYTKFISVIYEREITVRDRNRFHHFKDGTCS 599
Query: 601 CRDYW 605
C+DYW
Sbjct: 600 CKDYW 604
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/606 (69%), Positives = 507/606 (83%), Gaps = 1/606 (0%)
Query: 1 MTRTSVL-HQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF 59
M TSVL + LL + P ELNL+ KEQE L ++K CK+LEEFK+VH +LK+G
Sbjct: 1 MMGTSVLNYNHHLLPSKDLPQSSSELNLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGL 60
Query: 60 FWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
F + FC+S+++ATCALS W SMDYACSIF+Q+DEP FDFNT+IRG+V + FE A++LY
Sbjct: 61 FLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTMIRGYVNNMNFENAIYLY 120
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
N+M +R VEPDNFT+P + KACA+L ++EGMQIHGHVFK+G E D++VQNSLINMYGKC
Sbjct: 121 NDMLQREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKC 180
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+E + AIF++M+QKSVASWSAIIAAHAS +W ECL LF +M+ E CWR EESILV+V
Sbjct: 181 RDIEMSCAIFRRMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNV 240
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
LSACTHLGA LG+C HGSL++NI+ LNV V TSL+DMYVKCG L+KGLCLF+ M K Q
Sbjct: 241 LSACTHLGAFHLGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQ 300
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
L+YSV+ISGL +HG G++AL IFSEM+ EGLEPDDV YV VLSACSH+GLV+EGL FD+
Sbjct: 301 LSYSVIISGLGLHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDK 360
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
MK EYRI PT+QHYGC+VDL GRAG+L EA +L+QSMPI+ NDV+WRSLLSA KVH NL+
Sbjct: 361 MKFEYRIEPTMQHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLK 420
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+GEIAA+NLF+++SH+PSDY++LSNMYARAQ+W + AKIRT+M ++GL Q+PG+SLVEV
Sbjct: 421 LGEIAAENLFRLSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVK 480
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
KVYKFVSQD+S+ NIY+MIHQMEWQL+FEGY PD SQV+ DVDE+EK ERLKGHSQ
Sbjct: 481 SKVYKFVSQDKSYCKSGNIYKMIHQMEWQLRFEGYMPDTSQVMLDVDEEEKGERLKGHSQ 540
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLAIAFALIH SQGS IRI RNLRMCNDCH+YTKL+S+IYEREI VRDR RFH FKDG C
Sbjct: 541 KLAIAFALIHTSQGSAIRIIRNLRMCNDCHSYTKLVSMIYEREITVRDRNRFHHFKDGNC 600
Query: 600 SCRDYW 605
SCRDYW
Sbjct: 601 SCRDYW 606
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 875 bits (2260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/562 (71%), Positives = 485/562 (86%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+EEFK+ HA +LK G F + FCASNLVATCALS WGSMDYACSIFRQ+DEPG+F+FNT++
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
RG VK++ EEAL Y EM ERGV+PDNFT+P L KACA+L A++EGMQ+H H+ K+G E
Sbjct: 61 RGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGLE 120
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+FVQNSLI+MYGKC ++ A+F+QM+++SVASWSA+I AHAS G+WS+CL+L G+M
Sbjct: 121 NDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLGDM 180
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+NE WR EESILVSVLSACTHLGALDLG+ HG L+RN+S LNVIVETSLI+MY+KCG
Sbjct: 181 SNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFLLRNVSGLNVIVETSLIEMYLKCGX 240
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L KG+CLF+ MA K +L+YSVMISGLAMHG G+E L IF+EML +GLEPDD+VYVGVL+A
Sbjct: 241 LYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEPDDIVYVGVLNA 300
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSHAGLV EGL CF+RMKLE+ I PT+QHYGC+VDLMGRAG + EALELI+SMP++ NDV
Sbjct: 301 CSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALELIKSMPMEPNDV 360
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+WRSLLSASKVH+NL+ GEIAAK LF+++S SDYV+LSNMYA+AQRW DVA+ RT M
Sbjct: 361 LWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRWEDVARTRTNMF 420
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
SKGL+Q PGFSLVEV RK+++FVSQD HP +++YEM++QMEWQLKFEGY PD +QVL
Sbjct: 421 SKGLSQRPGFSLVEVKRKMHRFVSQDAGHPQSESVYEMLYQMEWQLKFEGYXPDTTQVLC 480
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
DVDE+EK++RL GHSQKLAIA+ALIH SQGSP+RI RNLRMCNDCHTYTKLIS+I++REI
Sbjct: 481 DVDEEEKKQRLSGHSQKLAIAYALIHTSQGSPVRIVRNLRMCNDCHTYTKLISIIFDREI 540
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
VRDR RFH FKDG CSCRDYW
Sbjct: 541 TVRDRHRFHHFKDGACSCRDYW 562
>gi|357484833|ref|XP_003612704.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514039|gb|AES95662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 572
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/563 (69%), Positives = 474/563 (84%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
++EEFK+VHAHVLK G F++ FC SNLVATCAL+ WGSMDYACSIF QIDEP +FD+NT+
Sbjct: 10 HMEEFKQVHAHVLKCGIFFDTFCMSNLVATCALTKWGSMDYACSIFTQIDEPSSFDYNTM 69
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
IRG V +++ EEAL LY +M ERGVEPD FT+P + KAC+ L + EG+Q+HGHVFK+G
Sbjct: 70 IRGNVNDMKLEEALLLYVDMIERGVEPDKFTYPFVLKACSLLGVVDEGIQVHGHVFKMGL 129
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
E D+ VQNSLINMYGKC +++ A +F MD+KSVASWSAII AHA +W+ECL L G+
Sbjct: 130 EGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGK 189
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M++E R EES LV+VLSACTHLG+ DLGKC HG L+RNIS LNV+V+TSLIDMYVK G
Sbjct: 190 MSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSG 249
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
CLEKGL +F+ M++K + +Y+VMISGLA+HG+GKEAL +FSEM+ EGL PDDVVYVGV S
Sbjct: 250 CLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFS 309
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSHAGLV EGL CF M+ E++I PTVQHYGC+VDL+GR GML EA ELI+SM I+ ND
Sbjct: 310 ACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPND 369
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
V+WRSLLSA KVHHNLEIG+IAA+NLF +N ++ DY++L+NMYA+AQ+W DVAKIRT++
Sbjct: 370 VIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKL 429
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
A + L Q+PGFSL+E RKVYKFVSQD+S P W+ IYEMIHQMEWQLKFEGY PD SQVL
Sbjct: 430 AERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVL 489
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DVD++EK+ERLK HSQKLAIAF LIH S+GSP+RI RNLRMC+DCHTYTK IS+IYERE
Sbjct: 490 LDVDDEEKKERLKFHSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYERE 549
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
I VRDR RFH FK+G+CSC+DYW
Sbjct: 550 ITVRDRLRFHHFKNGSCSCKDYW 572
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/608 (60%), Positives = 473/608 (77%), Gaps = 4/608 (0%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF 59
M +T + QSLL ++ ++ PE+N KEQECL +LK C N++EFK+VHA +K
Sbjct: 1 MIKTPTILQSLLASR-DDFTHNPEVNNCGGKEQECLYLLKRCNNIDEFKQVHARFIKLSL 59
Query: 60 FWNPFCASNLV-ATCALSHW-GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
F + +++ V A CA S W SM+YA SIFR ID+P FDF T+IRG+V E+ FE AL
Sbjct: 60 FCSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFKTMIRGYVNEMSFEVALC 119
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
YNEM ERG+EPDNFT+P L KAC +L+A++EG QIHGHVFK+G E D+FVQNSLINMYG
Sbjct: 120 FYNEMMERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKLGLEADVFVQNSLINMYG 179
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+C ++E +S +F++++ KS ASWS++ +A G+WSECL LF EM E + EES +V
Sbjct: 180 RCGEMELSSTVFEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMV 239
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S LSAC + GAL+LG HG L+RNIS LN+IV+TSL+DMYVKCGC++ L +F+ M +
Sbjct: 240 SALSACANTGALNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKR 299
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
LTYS MISG A+HG+G+ AL +FSEM++EGLEPD VVYV +L+ACSH+GLV EG F
Sbjct: 300 NNLTYSAMISGFALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVF 359
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M E ++ PT +HYGC+VDL+GRAG+L EALE IQS+PI+QNDVVWRS LS +VH N
Sbjct: 360 GEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQN 419
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E+G+IAA+ L ++ SH+P DY+L+SNMY++A W DVA+ RTE+A KGL Q+PGFS V+
Sbjct: 420 IELGQIAAQELLKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVK 479
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V K ++FVSQDRSHP IY+M+HQMEWQLKFEGYSPD++Q+L +VDE+EK+ERLKGH
Sbjct: 480 VKGKTHRFVSQDRSHPQCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGH 539
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
SQK+AIAFAL++ GS I+IARNLRMC+DCHTYTK IS+IYEREI+VRDR RFH FK G
Sbjct: 540 SQKVAIAFALLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGG 599
Query: 598 TCSCRDYW 605
TCSC+DYW
Sbjct: 600 TCSCKDYW 607
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/608 (59%), Positives = 477/608 (78%), Gaps = 5/608 (0%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF 59
M + +L QSLL ++ ++ PE+N KEQECL +LK C N++EFK+VHA +K
Sbjct: 1 MIKAPIL-QSLLASR-DDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSL 58
Query: 60 FWNPFCASNLV-ATCALSHW-GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
F++ +++ V A CA S W SM+YA SIFR ID+P FDFNT+IRG+V + FEEAL
Sbjct: 59 FYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALC 118
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
YNEM +RG EPDNFT+P L KAC +L++++EG QIHG VFK+G E D+FVQNSLINMYG
Sbjct: 119 FYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYG 178
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+C ++E +SA+F++++ K+ ASWS++++A A G+WSECL LF M +E + EES +V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S L AC + GAL+LG HG L+RNIS LN+IV+TSL+DMYVKCGCL+K L +F+ M +
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
LTYS MISGLA+HG+G+ AL +FS+M++EGLEPD VVYV VL+ACSH+GLV EG F
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M E ++ PT +HYGC+VDL+GRAG+L EALE IQS+PI++NDV+WR+ LS +V N
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQN 418
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E+G+IAA+ L +++SH+P DY+L+SN+Y++ Q W DVA+ RTE+A KGL Q+PGFS+VE
Sbjct: 419 IELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVE 478
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
+ K ++FVSQDRSHP IY+M+HQMEWQLKFEGYSPD++Q+L +VDE+EK+ERLKGH
Sbjct: 479 LKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGH 538
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
SQK+AIAF L++ GS I+IARNLRMC+DCHTYTK IS+IYEREI+VRDR RFH FK G
Sbjct: 539 SQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGG 598
Query: 598 TCSCRDYW 605
TCSC+DYW
Sbjct: 599 TCSCKDYW 606
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 301/529 (56%), Positives = 407/529 (76%), Gaps = 5/529 (0%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF 59
M + +L QSLL ++ ++ PE+N KEQECL +LK C N++EFK+VHA +K
Sbjct: 1 MIKAPIL-QSLLASR-DDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSL 58
Query: 60 FWNPFCASNLV-ATCALSHW-GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
F++ +++ V A CA S W SM+YA SIFR ID+P FDFNT+IRG+V + FEEAL
Sbjct: 59 FYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALC 118
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
YNEM +RG EPDNFT+P L KAC +L++++EG QIHG VFK+G E D+FVQNSLINMYG
Sbjct: 119 FYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYG 178
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+C ++E +SA+F++++ K+ ASWS++++A A G+WSECL LF M +E + EES +V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S L AC + GAL+LG HG L+RNIS LN+IV+TSL+DMYVKCGCL+K L +F+ M +
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
LTYS MISGLA+HG+G+ AL +FS+M++EGLEPD VVYV VL+ACSH+GLV EG F
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M E ++ PT +HYGC+VDL+GRAG+L EALE IQS+PI++NDV+WR+ LS +V N
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQN 418
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E+G+IAA+ L +++SH+P DY+L+SN+Y++ Q W DVA+ RTE+A KGL Q+PGFS+VE
Sbjct: 419 IELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVE 478
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ K ++FVSQDRSHP IY+M+HQMEWQLKFEGYSPD++Q+L +VD
Sbjct: 479 LKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVD 527
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 298/574 (51%), Positives = 398/574 (69%), Gaps = 10/574 (1%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCA-SNLVATCALSHW-GSMDYACSIFRQIDEPGAFD 98
C +L+E +K HA +K G +P A L A + W GSM YA SIF +D+P AFD
Sbjct: 41 CASLDEARKAHARHVKLGLDRSPRHARPLLAACALAADWPGSMAYAASIFAALDDPEAFD 100
Query: 99 FNTLIRGFVKEV-----EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NTL+RG+V + AL L+ +M + GVEPD++TFP +FKACA+L AL+EG Q+
Sbjct: 101 YNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQL 160
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIAAHASNG 211
GH+ K+GF+ D QNSLI+ YGKC + + A F+QM D+++ ASWSA++AA+ G
Sbjct: 161 QGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAG 220
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
W+EC++ FG M WRP+ES +VS LSAC HLGA D+G+ H +L+RN + LN +
Sbjct: 221 RWAECVESFGAMVRAG-WRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMS 279
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
TSL+DMY KCGC+E +F M DK TYS M+SGLA+HG G++AL +F M+REG
Sbjct: 280 TSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHR 339
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD VYVGVL+ACS AGL+ EGL CFDRM+LE+++ P QHYGC+VDLM RAG L +A
Sbjct: 340 PDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARA 399
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI +MP D WRSLL+A ++H NLE+ E A + L ++ + + DY++LS+M+ARA
Sbjct: 400 LIGNMPTGPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARAHN 459
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
A RTE +GL Q+PG+S VEV ++FVSQDRSHP D+IYEM+HQMEWQL+F
Sbjct: 460 RDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRF 519
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY+PD S++ D E+EKR + HSQKLA+AF L+ +G+P+R+ NLRM +CH Y
Sbjct: 520 EGYTPDTSELALDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAY 579
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ LIS I+ REI+VRDR RFHRFK G CSC +YW
Sbjct: 580 SALISEIFGREIVVRDRNRFHRFKRGACSCGNYW 613
>gi|125583346|gb|EAZ24277.1| hypothetical protein OsJ_08028 [Oryza sativa Japonica Group]
Length = 613
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/574 (52%), Positives = 397/574 (69%), Gaps = 10/574 (1%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCA-SNLVATCALSHW-GSMDYACSIFRQIDEPGAFD 98
C NL+E +K HA +K G +P A L A + W GSM YA SIF +D+P AFD
Sbjct: 41 CANLDEARKAHARHVKLGLDRSPRHARPLLAACALAADWPGSMAYAASIFAALDDPEAFD 100
Query: 99 FNTLIRGFVKEVEFEEA-----LFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NTL+RG+V L L+ +M + GVEPD++TFP +FKACA+L AL+EG Q+
Sbjct: 101 YNTLMRGYVAAAGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEGRQL 160
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIAAHASNG 211
GH+ K+GF+ D QNSLI+ YGKC + + A F+QM D+++ ASWSA++AA+ G
Sbjct: 161 QGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYTRAG 220
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
W+EC++ FG M WRP+ES +VS LSAC HLGA D+G+ H +L+RN + LN +
Sbjct: 221 RWAECVESFGAMVRAG-WRPDESSMVSALSACAHLGAHDVGRSIHCALLRNTARLNTFMS 279
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
TSL+DMY KCGC+E +F M DK TYS M+SGLA+HG G++AL +F M+REG
Sbjct: 280 TSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHR 339
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD VYVGVL+ACS AGL+ EGL CFDRM+LE+++ P QHYGC+VDLM RAG L +A
Sbjct: 340 PDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARA 399
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI SMP D WRSLL+A ++H NLE+ E A + L ++ + + DY++LS+M+ARA
Sbjct: 400 LIGSMPTGPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHARAHN 459
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
A RTE +GL Q+PG+S VEV ++FVSQDRSHP D+IYEM+HQMEWQL+F
Sbjct: 460 RDAAAARRTEAVDRGLAQAPGYSAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRF 519
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY+PD S++ D E+EKR + HSQKLA+AF L+ +G+P+R+ NLRM +CH Y
Sbjct: 520 EGYTPDTSELALDAGEEEKRRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAY 579
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ LIS I+ REI+VRDR RFHRFK G CSCR+YW
Sbjct: 580 SALISEIFGREIVVRDRNRFHRFKRGACSCRNYW 613
>gi|357137130|ref|XP_003570154.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Brachypodium distachyon]
Length = 622
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 307/592 (51%), Positives = 406/592 (68%), Gaps = 13/592 (2%)
Query: 26 NLRLKEQ---ECLTILKT--CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-G 79
+RL+EQ C K + L+E +K HA +K G +P A L+A CAL W G
Sbjct: 32 QIRLREQAPWPCRPSTKPVPARGLDEVRKAHARHVKLGLDRSPRHARPLLAACALGSWPG 91
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
M+YA +IF +DEP AFD+NTL+RG V + AL LY M E+GVEPD +TFP + K
Sbjct: 92 GMEYAAAIFAALDEPEAFDYNTLMRGHVAHDDPAAALRLYAAMLEQGVEPDRYTFPFVLK 151
Query: 140 ACAKLQALKEGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK--- 195
ACA+L A +G Q+HGHV K+GF + D V NSLI+ YG+C + E A F+QM+ +
Sbjct: 152 ACARLAASGQGRQLHGHVAKLGFSQHDEHVGNSLISFYGRCGEPELARRAFEQMEAEEST 211
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ ASWSA++AA+ GLW++CL FG M RPEES +VS LSAC HLGA D+G+
Sbjct: 212 TAASWSALLAAYTRAGLWADCLDSFGAMARAG-GRPEESSMVSALSACAHLGAYDVGRSI 270
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H +L+RN ALN +ETSL+DMY KCGC++K +F M K + TYS M+SGLA+HG G
Sbjct: 271 HCALLRNTVALNTFMETSLVDMYAKCGCIDKASAVFDAMDGKNEWTYSAMVSGLALHGDG 330
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+AL +F M REG +PD+ VYVG+L+ACS +GL+ EGL CFDRM+LE+++ P QHYGC
Sbjct: 331 LKALQVFDAMAREGHKPDEAVYVGILNACSRSGLLEEGLRCFDRMRLEHKVAPNAQHYGC 390
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDLM RAG L +A LI SMP D WRSLL+A ++H N+E+ E A + L I + +
Sbjct: 391 MVDLMARAGRLDDARALIGSMPTGPTDAAWRSLLNACRIHGNVELAERALQGLSGIGAVN 450
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
DYV+L++M+AR + W A +RTE A++GL Q+PGFS VEV + ++F SQDRSHP
Sbjct: 451 AGDYVILADMHARTKNWDAAAALRTEAANRGLAQAPGFSAVEVHGRAHRFASQDRSHPRT 510
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQV--LRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
IYEM+HQMEWQL+FEGY PD S+V RD E+EKR + HSQKLA+AF L+ +G
Sbjct: 511 AEIYEMLHQMEWQLRFEGYEPDTSEVALTRDAGEEEKRRAVAAHSQKLAMAFGLLSTPEG 570
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+P+R+ NLRM +CH Y+ LIS I+ RE++VRDR RFHRF+ G CSCR+YW
Sbjct: 571 TPVRVVTNLRMSKECHAYSALISEIFGREVVVRDRNRFHRFRRGACSCRNYW 622
>gi|242062828|ref|XP_002452703.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
gi|241932534|gb|EES05679.1| hypothetical protein SORBIDRAFT_04g031000 [Sorghum bicolor]
Length = 622
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/573 (50%), Positives = 395/573 (68%), Gaps = 8/573 (1%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQIDEPGAFD 98
+ ++L+E +K HA +K G P A L+A CALS W G M+ A SIF + EP AFD
Sbjct: 51 SVRSLDEVRKAHARHIKLGVDRCPRHARPLLAACALSGWPGGMELAASIFESLVEPEAFD 110
Query: 99 FNTLIRGFVK----EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+NTL+RG V + E AL LY +M E GV PD++TFP + KACA+L +L++G Q+
Sbjct: 111 YNTLMRGHVGGGRGDREPAAALRLYVDMLEAGVGPDSYTFPFVLKACAQLASLQQGRQLQ 170
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGL 212
H+ K+G + D VQNSLI+ YGKC + A F +++ +++ ASWSA++AA+ GL
Sbjct: 171 AHIEKLGLQHDEHVQNSLISFYGKCGEPAMARLAFDRVEDEERTTASWSALLAAYTKAGL 230
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
W ECL+ FG M + WRP+ES +VS +SAC HLGA D+G+ H +L+RN + LN I++T
Sbjct: 231 WGECLESFGAMVLDG-WRPDESSMVSAISACAHLGAFDVGRSIHCALLRNTARLNTIMQT 289
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+DMY KCG +EK +F M DK YS M+SGLA+HG G++AL +F M+REG P
Sbjct: 290 SLVDMYAKCGSIEKAAAVFDAMDDKNAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAP 349
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D YVGVL+ACS AGL+ +GL CFDRM+LE++ P QHYGC+VDLM RAG L +A L
Sbjct: 350 DAAAYVGVLNACSRAGLLEDGLRCFDRMRLEHKFAPNAQHYGCMVDLMARAGRLDDARAL 409
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I SMP D WRSLL+A ++H +L++ E A + L + + + DYV++++M+ARA+ W
Sbjct: 410 IGSMPTGPTDTAWRSLLNACRIHGDLDLAESALEELRSLGAANAGDYVIVADMHARAKNW 469
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
A RTE GL QSPGFS VEV ++++FVSQD SHP +IYEM+HQMEWQL+F+
Sbjct: 470 AAAAAFRTEAVDWGLAQSPGFSAVEVRGELHRFVSQDMSHPRTRDIYEMLHQMEWQLRFD 529
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD S+V DV E+EKR + HSQKLA+AF L+ +G+P+R+ NLRM +CH Y+
Sbjct: 530 GYRPDTSEVALDVGEEEKRHVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYS 589
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I+ REI++RDR R HRF+ G C+CRDYW
Sbjct: 590 ALISEIFGREIVIRDRNRLHRFRRGACTCRDYW 622
>gi|326525961|dbj|BAJ93157.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 615
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/580 (50%), Positives = 401/580 (69%), Gaps = 9/580 (1%)
Query: 34 CLTI-LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQI 91
C T+ + + L+E +K H +K G +P L+A CAL W GSM+YA +IF +
Sbjct: 37 CATVSARPVRGLDEVRKAHVANIKLGLDRSPPHLRPLLAACALGEWPGSMEYAAAIFATL 96
Query: 92 DEPGAFDFNTLIRG-FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
DEP AFD+NTL+RG V + AL LY +M V PD +TFP + KACA+L A ++G
Sbjct: 97 DEPEAFDYNTLMRGHVVGGRDPAAALRLYVDMLHNDVVPDGYTFPFVLKACAQLLAFRQG 156
Query: 151 MQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAH 207
Q+ GH K+GF E D QNSLI+ YGKC + E A F+QM+ +++ ASWSA++AA+
Sbjct: 157 RQLQGHAMKLGFLEHDEHAQNSLISFYGKCGEPELARRAFEQMEAGERTAASWSALLAAY 216
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
G W++CL+ FG M + WRP+ES +VS LSAC HLGA D+G+ HG+L+RN LN
Sbjct: 217 TKAGRWADCLESFGAMVRDG-WRPDESSMVSALSACAHLGAYDVGRSVHGALLRNTVTLN 275
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ETSL+DMY KCGC+EK +F M K + TYS M+SGLA+HG G++AL +F M+
Sbjct: 276 TFMETSLVDMYAKCGCIEKATAVFDGMDGKKNEWTYSAMVSGLALHGDGRKALKVFDAMI 335
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
EG +PD+ VYVGVL+ACS +GL+ EGL CFDRM+LE ++ P QHYGC+VDLM RAG +
Sbjct: 336 SEGHKPDEAVYVGVLNACSRSGLLEEGLRCFDRMRLERKVAPNAQHYGCMVDLMARAGRM 395
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH-HPSDYVLLSNM 445
EA ELI SMP D WRSLL+A ++H ++E+ + A + L ++ + DY++L++M
Sbjct: 396 DEARELIGSMPTGPTDTAWRSLLNACRIHGDIELADRALQELARLGGAVNAGDYIILADM 455
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
+A+A+ W + +RTE +GL Q+PGFS VEV K+++F SQDRSHP +IYEM+HQM
Sbjct: 456 HAKAKNWEEAVALRTEAVHRGLAQAPGFSAVEVHGKMHRFTSQDRSHPRTADIYEMLHQM 515
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
EWQL+FEGY PD S+V + D++EKR + HSQKLA+AF L+ +G+P+R+ NLRM
Sbjct: 516 EWQLRFEGYKPDTSEVALEADDEEKRRAVAAHSQKLAMAFGLLSTPEGTPVRVVTNLRMS 575
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+CH Y+ LIS I+ RE++VRDR RFHRF+ G CSC +YW
Sbjct: 576 KECHAYSALISEIFGREVVVRDRNRFHRFRRGGCSCGNYW 615
>gi|413938369|gb|AFW72920.1| hypothetical protein ZEAMMB73_491813 [Zea mays]
Length = 625
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 285/570 (50%), Positives = 387/570 (67%), Gaps = 8/570 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQIDEPGAFDFNT 101
+L+E +KVHA +K G P A L+A CA+S W G M+ A SIF + EP AFD+NT
Sbjct: 57 SLDEVRKVHARHIKLGLDRCPRYARPLLAACAVSGWPGGMELAASIFESLVEPEAFDYNT 116
Query: 102 LIRGFVK----EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
L+RG V + + AL LY + E GV PD++TFP + KACA+L AL+EG Q+ H+
Sbjct: 117 LMRGHVSGGGGDRDPAAALRLYIDGLEAGVSPDSYTFPFVLKACAQLAALQEGRQLQAHI 176
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSE 215
K+GF+ D VQNSLI+ YGKC A F +++ +++ SWSA++AA+ GLW E
Sbjct: 177 VKLGFQHDEHVQNSLISFYGKCGAPAMARLAFDRVEAEERTTVSWSALLAAYTKAGLWGE 236
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
CL FG M + WRP+ES +VS LSAC HLG+ D G+ H +L+RN + LN I+ TSL+
Sbjct: 237 CLASFGSMMLDG-WRPDESSMVSALSACAHLGSFDAGRSVHCALLRNTARLNTIMLTSLL 295
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KCG +EK F M DK YS M+SGLA+HG G++AL +F M+REG PD
Sbjct: 296 DMYAKCGSIEKAAAAFDAMDDKSAWAYSAMLSGLALHGDGRKALQVFDAMVREGHAPDAA 355
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
YVGVL+ACS AGL+ +GL CFDRM+LE+++ P HYGC+VDLM RAG L +A LI +
Sbjct: 356 AYVGVLNACSRAGLLEDGLRCFDRMRLEHKVAPNALHYGCMVDLMARAGRLDDARALIGT 415
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
MP D WRSLL+A ++H +L++ A + L ++ + + DYV++++M+ARA+ W
Sbjct: 416 MPTGPTDTAWRSLLNACRIHGDLDLAWHALQELRRLGAANAGDYVIVADMHARAKNWTAA 475
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
A +RTE GL QS GFS VEV ++++FVSQD +HP +IYEM+HQMEWQL+F+GY
Sbjct: 476 AALRTEAVDSGLAQSLGFSAVEVRGELHRFVSQDMAHPRTRDIYEMLHQMEWQLRFDGYK 535
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
PD S+V D E+EK + HSQKLA+AF L+ +G+P+R+ NLRM +CH Y+ LI
Sbjct: 536 PDTSEVALDAGEEEKGRVVAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALI 595
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S I+ R+I++RDR R HRF+ GTCSCRDYW
Sbjct: 596 SEIFGRDIVIRDRNRLHRFRCGTCSCRDYW 625
>gi|413923546|gb|AFW63478.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 489
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 258/490 (52%), Positives = 349/490 (71%), Gaps = 3/490 (0%)
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
+Y +M E GV PD++TFP KACA+L AL+EG Q+ H+ K+GF+ D VQNSLI+ YG
Sbjct: 1 MYVDMLEAGVRPDSYTFPFALKACAQLAALQEGRQLQAHIVKLGFQHDEHVQNSLISFYG 60
Query: 178 KCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
KC + A F +++ +++ ASWSA++AA+ GLW ECL+ FG M + WRP+ES
Sbjct: 61 KCVEPAMARLAFDRVEAEERTAASWSALLAAYTKAGLWGECLESFGAMVLDG-WRPDESS 119
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
VS LSAC HLGA D+G+ H +L+RN + LN I++TSL+DMY KCG +EK +F M
Sbjct: 120 TVSALSACAHLGAFDVGRSLHCALLRNTARLNTIMQTSLVDMYAKCGSIEKAAAVFDAMD 179
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
DK TYS M+SGLA+HG G++AL +F M+RE PD YVGVL+ACS AGL+ +GL
Sbjct: 180 DKNAWTYSAMLSGLALHGDGRKALQVFDAMVRERHAPDAATYVGVLNACSRAGLLEDGLR 239
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
CFDRM+LE+ + P Q+YGC+VDLM RAG L +A LI SM D WRSLL+A ++H
Sbjct: 240 CFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTDTAWRSLLNACRIH 299
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
+L++ E A + L ++ + + DYV++++M+ARA+ W A++RTE GL QSPG S
Sbjct: 300 GDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEAVDWGLAQSPGVSA 359
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
VEV ++++FVSQDRSHP +IYEM+HQMEWQL+F+GY PD S+V DV E+EKR +
Sbjct: 360 VEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVALDVGEEEKRRVVA 419
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HSQKLA+AF L+ ++G+P+RI NLRM +CH Y+ LIS I+ REI++RDR R HRF+
Sbjct: 420 AHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGREIVIRDRNRLHRFR 479
Query: 596 DGTCSCRDYW 605
G CSCRDYW
Sbjct: 480 RGVCSCRDYW 489
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Query: 38 LKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LK C L +E +++ AH++K GF + ++L++ +M + +E
Sbjct: 21 LKACAQLAALQEGRQLQAHIVKLGFQHDEHVQNSLISFYGKCVEPAMARLAFDRVEAEER 80
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A ++ L+ + K + E L + M G PD + + ACA L A G +H
Sbjct: 81 TAASWSALLAAYTKAGLWGECLESFGAMVLDGWRPDESSTVSALSACAHLGAFDVGRSLH 140
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ + + +Q SL++MY KC +E A+A+F MD K+ ++SA+++ A +G
Sbjct: 141 CALLRNTARLNTIMQTSLVDMYAKCGSIEKAAAVFDAMDDKNAWTYSAMLSGLALHGDGR 200
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG-KCTHGSLIRNISALNVIVETS 273
+ L++F M E+ P+ + V VL+AC+ G L+ G +C + + A N
Sbjct: 201 KALQVFDAMVRER-HAPDAATYVGVLNACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYGC 259
Query: 274 LIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
++D+ + G L+ L M + +++ +HG A E+ R G
Sbjct: 260 MVDLMARAGRLDDARALIGSMSTGPTDTAWRSLLNACRIHGDLDLAERALQELRRLG 316
>gi|413923547|gb|AFW63479.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 490
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/491 (52%), Positives = 349/491 (71%), Gaps = 4/491 (0%)
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEG-MQIHGHVFKVGFECDLFVQNSLINMY 176
+Y +M E GV PD++TFP KACA+L AL+EG Q+ H+ K+GF+ D VQNSLI+ Y
Sbjct: 1 MYVDMLEAGVRPDSYTFPFALKACAQLAALQEGRQQLQAHIVKLGFQHDEHVQNSLISFY 60
Query: 177 GKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
GKC + A F +++ +++ ASWSA++AA+ GLW ECL+ FG M + WRP+ES
Sbjct: 61 GKCVEPAMARLAFDRVEAEERTAASWSALLAAYTKAGLWGECLESFGAMVLDG-WRPDES 119
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
VS LSAC HLGA D+G+ H +L+RN + LN I++TSL+DMY KCG +EK +F M
Sbjct: 120 STVSALSACAHLGAFDVGRSLHCALLRNTARLNTIMQTSLVDMYAKCGSIEKAAAVFDAM 179
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
DK TYS M+SGLA+HG G++AL +F M+RE PD YVGVL+ACS AGL+ +GL
Sbjct: 180 DDKNAWTYSAMLSGLALHGDGRKALQVFDAMVRERHAPDAATYVGVLNACSRAGLLEDGL 239
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
CFDRM+LE+ + P Q+YGC+VDLM RAG L +A LI SM D WRSLL+A ++
Sbjct: 240 RCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDARALIGSMSTGPTDTAWRSLLNACRI 299
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H +L++ E A + L ++ + + DYV++++M+ARA+ W A++RTE GL QSPG S
Sbjct: 300 HGDLDLAERALQELRRLGAANAGDYVIVADMHARAKDWAAAAQLRTEAVDWGLAQSPGVS 359
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
VEV ++++FVSQDRSHP +IYEM+HQMEWQL+F+GY PD S+V DV E+EKR +
Sbjct: 360 AVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLRFDGYKPDTSEVALDVGEEEKRRVV 419
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HSQKLA+AF L+ ++G+P+RI NLRM +CH Y+ LIS I+ REI++RDR R HRF
Sbjct: 420 AAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHAYSALISEIFGREIVIRDRNRLHRF 479
Query: 595 KDGTCSCRDYW 605
+ G CSCRDYW
Sbjct: 480 RRGVCSCRDYW 490
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 7/298 (2%)
Query: 38 LKTCKNL----EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
LK C L E +++ AH++K GF + ++L++ +M + +E
Sbjct: 21 LKACAQLAALQEGRQQLQAHIVKLGFQHDEHVQNSLISFYGKCVEPAMARLAFDRVEAEE 80
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
A ++ L+ + K + E L + M G PD + + ACA L A G +
Sbjct: 81 RTAASWSALLAAYTKAGLWGECLESFGAMVLDGWRPDESSTVSALSACAHLGAFDVGRSL 140
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H + + + +Q SL++MY KC +E A+A+F MD K+ ++SA+++ A +G
Sbjct: 141 HCALLRNTARLNTIMQTSLVDMYAKCGSIEKAAAVFDAMDDKNAWTYSAMLSGLALHGDG 200
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG-KCTHGSLIRNISALNVIVET 272
+ L++F M E+ P+ + V VL+AC+ G L+ G +C + + A N
Sbjct: 201 RKALQVFDAMVRER-HAPDAATYVGVLNACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYG 259
Query: 273 SLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
++D+ + G L+ L M + +++ +HG A E+ R G
Sbjct: 260 CMVDLMARAGRLDDARALIGSMSTGPTDTAWRSLLNACRIHGDLDLAERALQELRRLG 317
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 259/576 (44%), Positives = 377/576 (65%), Gaps = 4/576 (0%)
Query: 32 QECLTILKTCKNLE-EFKKVHAHVLKWGF-FWNPFCASNLVATCALSHWGSMDYACSIFR 89
++C+ +L +C + + +F+++HA ++ G NP L+ T LS M YA IF
Sbjct: 40 KKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTL-LSFCSPMSYAHQIFS 98
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
QI P F +NT+IRG+ + AL LY +M +EPD T+P L KA AKL ++E
Sbjct: 99 QIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVRE 158
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G ++H + GFE +FVQN+L++MY C E A +F+ M ++++ +W+++I +A
Sbjct: 159 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 218
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG +E L LF EM + P+ +VS+LSAC LGAL LG+ H +++ N+
Sbjct: 219 NGRPNEALTLFREMG-LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLH 277
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+D+Y KCG + + +F M +K ++++ +I GLA++G GKEAL +F E+ R+G
Sbjct: 278 AGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKG 337
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L P ++ +VGVL ACSH G+V+EG F RMK EY IVP ++HYGC+VDL+GRAG++ +A
Sbjct: 338 LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQA 397
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E IQ+MP+Q N VVWR+LL A +H +L +GE+A L Q+ H DYVLLSN+YA
Sbjct: 398 HEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASE 457
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
QRW DV K+R M +G+ ++PG SLVE+ ++++FV DRSHP + IY + ++ L
Sbjct: 458 QRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLL 517
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K EGY P IS VL D++E+EK L HS+K+AIAF LI+ + G PIR+ +NLR+C DCH
Sbjct: 518 KLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCH 577
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS +++REI+VRDR RFH FKDG CSC+DYW
Sbjct: 578 LAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/613 (41%), Positives = 372/613 (60%), Gaps = 35/613 (5%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS--MDY 83
LRLK + + L+TC +L K +HA++++ + F AS L+A C G+ +DY
Sbjct: 13 TLRLKNPKLFS-LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDY 71
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A IF QI P F FN +IRG ++A Y + +G+ PDN TFP L K+C K
Sbjct: 72 ASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTK 131
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG-------------------------- 177
L + G Q HGH+ K GFE D++VQNSL++MY
Sbjct: 132 LHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSM 191
Query: 178 -----KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
KC VE A +F QM +K++ +WS +I+ +A N + + ++LF + ++ R
Sbjct: 192 IRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGV-RAN 250
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
E+++VSV+S+C HLGAL+LG+ H +++N LN+I+ T+L+DMY +CG ++K + +F
Sbjct: 251 ETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFE 310
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+ ++ L+++ +I+GLAMHG + +L F+ M+ GL P D+ + VLSACSH GLV
Sbjct: 311 DLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVER 370
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G F+ MK ++R+ P ++HYGC+VDL+GRAG L EA + MP++ N VW +LL A
Sbjct: 371 GFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGAC 430
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
++H N EIGE K L Q+ H YVLLSN+YA A+ W V ++R M +KGL + PG
Sbjct: 431 RIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPG 490
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
SL+E+ +V+KF D SHP D I M ++ +++ GY + + L D+DE+EK
Sbjct: 491 HSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKES 550
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L HS+KLAIAF ++ G+PIRI +NLR+C DCHT TKLIS ++ RE+IVRDR RFH
Sbjct: 551 ALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFH 610
Query: 593 RFKDGTCSCRDYW 605
F+ G CSC DYW
Sbjct: 611 HFRQGLCSCMDYW 623
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/586 (41%), Positives = 381/586 (65%), Gaps = 8/586 (1%)
Query: 25 LNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
+N R EQ CL IL+ C L + ++H H++K GF NP + T A S+ ++ YA
Sbjct: 1 MNHRAVEQPCLDILQACNTLPKLAQLHTHIIKLGFQNNPLVLTKF--TSASSNLDAIPYA 58
Query: 85 CSIFRQIDEPGAFD---FNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKA 140
S+ +++ +D F+T+IR + + + + A+F YN M G+ P+ + FP + KA
Sbjct: 59 MSLVFSVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKA 118
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVAS 199
CA L+ L G +HG + K GF+ D+FVQN++++MY C +EFA +F +M + +
Sbjct: 119 CAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVT 178
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+A+I +A G + + LF +M P++ +VSVLSACT LGAL+LGK +
Sbjct: 179 WTAMIGGYARLGQSAGAVGLFRKMQIAGVC-PDDVTMVSVLSACTDLGALELGKWIESYI 237
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+ V + +L+DM+ KCG ++K L LFR M+ + ++++ +I GLAMHG+G EA+
Sbjct: 238 EKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAV 297
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
S+F EM G+ P+D+ ++G+LSACSH+GLV G F M ++ IVP ++HYGC+VDL
Sbjct: 298 SLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDL 357
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+ RAG++ EALE ++ MPI+ N ++WR+L+SA +VH L++GE +K L + H S+Y
Sbjct: 358 LSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNY 417
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSN+Y + W +KIR M KG+ + PG +++E+ ++++F+ DRSH ++ I
Sbjct: 418 VLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEII 477
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+M+++M ++K GY+P ++V D+DE++K + L HS+KLAIAFAL++ GSPIRI
Sbjct: 478 KMVNEMGREMKRAGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRIT 537
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ +K IS IY REI++RDR RFH F+DG CSC D+W
Sbjct: 538 KNLRVCGDCHSASKFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/587 (43%), Positives = 369/587 (62%), Gaps = 11/587 (1%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
N R EQ CL +L+ C L + ++H H+LK G NP + + +L H + DYA
Sbjct: 24 NPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIH--ATDYAA 81
Query: 86 SIFRQIDEP----GAFDFNTLIRGFVKEVEFEE-ALFLYNEMFERGVEPDNFTFPALFKA 140
S + AF FNTLIR + + ++ AL LY M + P+ FT+P + KA
Sbjct: 82 SFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKA 141
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVAS 199
CA L+ L G +HG V K GF+CD+ VQN++++MY C + A +F +M + +
Sbjct: 142 CAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVT 201
Query: 200 WSAIIAAHASNGLWSECLKLFGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
WSA+I +A G +E + LF EM E C P+E +VS+LSACT LGAL+LGK
Sbjct: 202 WSAMIGGYARVGRSTEAVALFREMQMAEVC--PDEITMVSMLSACTDLGALELGKWIEAY 259
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ R+ V V +LIDM+ KCG + K L LFR M +K ++++ +I G+AMHG+G+EA
Sbjct: 260 IERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEA 319
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+F EM G+ PDDV ++G+LSACSH+GLV G F M +Y++VP ++HYGC+VD
Sbjct: 320 TCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVD 379
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
+ R G++ EALE +++MPI+ N V+ R+L+SA + H ++GE K L + H S+
Sbjct: 380 MYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESN 439
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA+ W KIR M KG+ + PG +++E+ ++Y+FV+ D+SH I
Sbjct: 440 YVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEI 499
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YEM+ +M ++K GY P S+VL D++E++K + L HS+KLAIAF L+ G+PIRI
Sbjct: 500 YEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRI 559
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH+ +K IS IY+REII+RDR RFH FK G CSC D+W
Sbjct: 560 VKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
>gi|255555919|ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
gi|223541982|gb|EEF43528.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
Length = 1203
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 227/338 (67%), Positives = 284/338 (84%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
M T+VLHQ +L PE+P + PE++LR+KEQECL++LK C+N+EEF++ HA +LKWGFF
Sbjct: 862 MIGTTVLHQIHILLPPEDPSESPEVSLRVKEQECLSLLKRCQNMEEFRQAHAQILKWGFF 921
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
NPFCASNLVATCALSHWGSMDYACSIFRQID+PG+F++NT+I+G+V + + E AL LY
Sbjct: 922 SNPFCASNLVATCALSHWGSMDYACSIFRQIDQPGSFEYNTMIKGYVSDFKMENALLLYY 981
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
EM E+ V+ DNFT+PAL KACA L+A+ E MQIHGH+FK+GFE DL+VQNSLINMYGKC
Sbjct: 982 EMLEKEVQSDNFTYPALIKACAWLRAIDESMQIHGHIFKLGFEEDLYVQNSLINMYGKCG 1041
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
K+E + +FKQ++ K +ASWS+IIAAH+S GLWSEC++ F EM ++ +RPEES+LVSVL
Sbjct: 1042 KIELSCDVFKQIEHKDIASWSSIIAAHSSLGLWSECVQFFEEMIQDRSYRPEESLLVSVL 1101
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SAC+HLGALDLG+C HG L+RN S LNV V+TSLIDMY+ CGC+EKG CLF+ M+ K
Sbjct: 1102 SACSHLGALDLGRCLHGVLLRNFSELNVTVQTSLIDMYINCGCIEKGFCLFQRMSKKNHF 1161
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+YSVMISGLAMHG+ EAL +FSEML EGL+PDDVVYV
Sbjct: 1162 SYSVMISGLAMHGRSMEALEVFSEMLDEGLQPDDVVYV 1199
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 9/283 (3%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE--KVEFASAIFKQMD 193
+L K C Q ++E Q H + K GF + F ++L+ +++A +IF+Q+D
Sbjct: 897 SLLKRC---QNMEEFRQAHAQILKWGFFSNPFCASNLVATCALSHWGSMDYACSIFRQID 953
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
Q ++ +I + S+ L L+ EM EK + + +++ AC L A+D
Sbjct: 954 QPGSFEYNTMIKGYVSDFKMENALLLYYEML-EKEVQSDNFTYPALIKACAWLRAIDESM 1012
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG + + ++ V+ SLI+MY KCG +E +F+ + K ++S +I+ + G
Sbjct: 1013 QIHGHIFKLGFEEDLYVQNSLINMYGKCGKIELSCDVFKQIEHKDIASWSSIIAAHSSLG 1072
Query: 314 QGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
E + F EM+++ P++ + V VLSACSH G ++ G C + L V
Sbjct: 1073 LWSECVQFFEEMIQDRSYRPEESLLVSVLSACSHLGALDLG-RCLHGVLLRNFSELNVTV 1131
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++D+ G + + L Q M ++N + ++S +H
Sbjct: 1132 QTSLIDMYINCGCIEKGFCLFQRMS-KKNHFSYSVMISGLAMH 1173
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +FR + Y+ MI G + + AL ++ EML + ++ D+ Y ++
Sbjct: 940 GSMDYACSIFRQIDQPGSFEYNTMIKGYVSDFKMENALLLYYEMLEKEVQSDNFTYPALI 999
Query: 342 SACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
AC+ ++E + + KL + VQ+ ++++ G+ G + + ++ + I+
Sbjct: 1000 KACAWLRAIDESMQIHGHIFKLGFEEDLYVQN--SLINMYGKCGKIELSCDVFKQ--IEH 1055
Query: 401 NDVV-WRSLLSASKVHHNLEIGEIAAK---NLFQINSHHPSDYVLLSNMYA 447
D+ W S+++A H +L + + + Q S+ P + +L+S + A
Sbjct: 1056 KDIASWSSIIAA---HSSLGLWSECVQFFEEMIQDRSYRPEESLLVSVLSA 1103
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 248/594 (41%), Positives = 374/594 (62%), Gaps = 15/594 (2%)
Query: 14 TQPEEPPKGPELNLRLKEQECLTILKTCKNLE-EFKKVHAHVLKWGF-FWNPFCASNLVA 71
T PE P +C+++L+ C + + + K++HA ++ G NP +L+
Sbjct: 11 TTPENP-----------LTKCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIF 59
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
T +S M YA ++F I P F +NT+IRG+ + A Y +M VEPD
Sbjct: 60 TI-VSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDT 118
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
T+P L KA +K ++EG IH + GFE +FVQNSL+++Y C E A +F+
Sbjct: 119 HTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFEL 178
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
M ++ + +W+++I A NG +E L LF EM+ E P+ +VS+LSA LGAL+L
Sbjct: 179 MKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGV-EPDGFTVVSLLSASAELGALEL 237
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G+ H L++ + N V SL+D+Y KCG + + +F M+++ ++++ +I GLA+
Sbjct: 238 GRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAV 297
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
+G G+EAL +F EM +GL P ++ +VGVL ACSH G+++EG F RMK E I+P ++
Sbjct: 298 NGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIE 357
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
HYGC+VDL+ RAG++ +A E IQ+MP+Q N V+WR+LL A +H +L +GEIA +L +
Sbjct: 358 HYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNL 417
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
H DYVLLSN+YA +RW DV IR M G+ ++PG+SLVE+ +VY+F DRS
Sbjct: 418 EPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRS 477
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
HP ++Y ++ ++ LK EGY P + VL D++E+EK + L HS+K+AIAF L++
Sbjct: 478 HPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTP 537
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+PIR+ +NLR+C DCH KLI+ IY+REI++RDR RFH F+ G+CSC+DYW
Sbjct: 538 PGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/615 (38%), Positives = 371/615 (60%), Gaps = 38/615 (6%)
Query: 26 NLRLKEQEC----LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
NL L++ E L+ L++C L K +HAH+++ ++ F AS L++ + +
Sbjct: 6 NLVLRKLELKNPKLSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNL--L 63
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
DYA +F QI P F +N+ IRGF + +++ Y + G+ PDN T+P L KAC
Sbjct: 64 DYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKAC 123
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK----------- 190
+ +L G+Q HG + + GF+ D++VQNSL+ MY ++ AS +F+
Sbjct: 124 TQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWT 183
Query: 191 --------------------QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
+M +K++ +WS +I+ +A N + + ++L+ + +E
Sbjct: 184 SMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGV-H 242
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
E+++VSV+++C HLGAL+LG+ H ++RN +N+I+ T+L+DMY +CG ++K + +
Sbjct: 243 ANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWV 302
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + + L+++ +I+G AMHG ++AL FS M + GL P ++ + VLSACSH GLV
Sbjct: 303 FDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLV 362
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
GL F+ MK +YRI P ++HYGC+VDL+GRAG L EA + + MP++ N +W +LL
Sbjct: 363 ERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLG 422
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A ++H N EI E A K L ++ H YVLLSN+YAR +W +V IR M +G+ +
Sbjct: 423 ACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKP 482
Query: 471 PGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEK 530
PG++L E+ KV+KF D++HP I M ++ +++ GY+ + L D+DE+EK
Sbjct: 483 PGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTGNNDDALFDIDEEEK 542
Query: 531 RERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKR 590
+ HS+KLAIA+A++ PIRI +NLR+C DCHT TKLIS +YERE+IVRDR R
Sbjct: 543 ESNIHRHSEKLAIAYAIMRTKGHDPIRIVKNLRVCEDCHTATKLISKVYERELIVRDRNR 602
Query: 591 FHRFKDGTCSCRDYW 605
FH FK G CSC DYW
Sbjct: 603 FHHFKGGACSCMDYW 617
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 252/583 (43%), Positives = 360/583 (61%), Gaps = 34/583 (5%)
Query: 54 VLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
+L+ F +PF AS +VA CAL GS+ YA +F QI P F N++IRG+ +
Sbjct: 1 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
+A+ Y M +G++PD FTFP+LFK+C L EG Q+H H K+GF D ++QN+L+
Sbjct: 61 QAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLM 117
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM---NNEKCW- 229
NMY C + A +F +M KSV SW+ +I A+A L E +KLF M +N CW
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177
Query: 230 ---------------------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+ ++ + S+L ACTHLGAL+LGK H + +
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
++V + T+L+DMY KCG +E + +F+ M +K +T++ +I GLAM GQG +AL +F
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
EM ++PD + +VGVL+ACSHAGLVNEG+ F+ M +Y I P+++HYGC+VD++GR
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG + EA +LIQ+MP+ + V LLSA ++H NL + E AA+ L +++ + YVLL
Sbjct: 358 AGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLL 417
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+Y+ + W K+R M + + + PG S +EV V++FV D SHP IYE +
Sbjct: 418 SNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETL 477
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
M +LK GY PD S+VL D+DE EK L HS+KLAIAF L+ + G+PIR+ +NL
Sbjct: 478 DDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNL 537
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C+DCH+ K IS +Y REIIVRDR RFH F G+CSCRD+W
Sbjct: 538 RVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 75/351 (21%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATC------------------- 73
++ K+C L E K++H H K GF + + + N+ + C
Sbjct: 83 SLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142
Query: 74 -------ALSHWGSMDYACSIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
A + W A +FR+++ F +N +I G V++ ++EEAL L+NEM
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
GV+ D T +L AC L AL+ G +H ++ K E D+ + +L++MY KC +E A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F++M +K V +W+A+I A G + L+LF EM + +P+ V VL+AC+H
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV-KPDAITFVGVLAACSH 321
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT---- 301
G ++ +G+ F M +K +
Sbjct: 322 AGLVN-----------------------------------EGIAYFNSMPNKYGIQPSIE 346
Query: 302 -YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-HAGLV 350
Y M+ L G+ EA + M + PD V VG+LSAC H LV
Sbjct: 347 HYGCMVDMLGRAGRIAEAEDLIQNM---PMAPDYFVLVGLLSACRIHGNLV 394
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/623 (42%), Positives = 378/623 (60%), Gaps = 34/623 (5%)
Query: 15 QPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA 74
Q + PP P L L + L L +CK L++ ++HA + G F + F AS +++ A
Sbjct: 20 QNQNPPWIPTPQL-LCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAA 78
Query: 75 LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFT 133
LS GS+ YA +F +I +P F NTLIR + +A+ Y+EM E V PD T
Sbjct: 79 LSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHT 138
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE---------- 183
FP L KAC+++ +L+ G IH HVFK+G+ ++ V N L+ MY C +E
Sbjct: 139 FPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTP 198
Query: 184 -------------------FASA--IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
F SA +F+ M + V SWS +I + + E L LF +
Sbjct: 199 ECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQD 258
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M EK P ES+LV+ LSAC HLGA++ G+ + R L V + T+LIDMY KCG
Sbjct: 259 MMGEKI-EPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCG 317
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+E+ L +F M +K L +S MI+GLA++GQGK+AL++FS+M +G++P++V ++G+L+
Sbjct: 318 SVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILN 377
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSH+ LV+EG F M Y + P H+ C+VDL GRAGML +A +I+SMP + N
Sbjct: 378 ACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNS 437
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+W +LL+A ++H + E+GE K L +++ +H YVLLSN+YA RW VA++R M
Sbjct: 438 AIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMM 497
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
+ ++++PG S +++ +++FV+ D SHP + IY + +M +LK GY PD QVL
Sbjct: 498 RERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVL 557
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
D+DE+EK L HS+KLAIAF LI G+ IRI +NLR+C DCH+ TKLIS IY RE
Sbjct: 558 LDMDEEEKETALCHHSEKLAIAFGLIKTDPGTTIRITKNLRVCADCHSATKLISKIYNRE 617
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRDR RFH F+DG+CSC D+W
Sbjct: 618 IIVRDRCRFHHFRDGSCSCMDFW 640
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/557 (43%), Positives = 362/557 (64%), Gaps = 4/557 (0%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
K+HA +LK G +P L+ +CA S S+ YA SIF I P F FNT+IR
Sbjct: 6 KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHA- 64
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+ +L L+++M GV PD+FTFP + KACA+LQ G+ +H +FK+GF+ D++V
Sbjct: 65 DSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACARLQT---GLDLHSLLFKLGFDSDVYV 121
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
QN LI+ YG C ++FA +F++M ++ + SWS++IA A NG E L LF M
Sbjct: 122 QNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGT 181
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+P+E I++SV+SA + LG L+LGK G + RN V + T+L+DM+ +CGC+E+ +
Sbjct: 182 VKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESM 241
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M ++ LT++ +I+GLA+HG+ EAL +F EM G +PD V + GVL ACSH G
Sbjct: 242 RVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGG 301
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV+EG F+ ++ EY + P +HYGC+VDL+GRAG+L EA + + MPI+ N ++WR+L
Sbjct: 302 LVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTL 361
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A H+ +E+ E + + +++S+H DYVLLSN+Y RW + A +R M K ++
Sbjct: 362 LGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRIS 421
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG SL+ V +++FV+ D +HP +++I E + M LK GY+PDIS VL D++E+
Sbjct: 422 KKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEE 481
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK L HS+KLA+AFAL+ IR+ +NLR+C+DCH + K S ++EREII+RDR
Sbjct: 482 EKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDR 541
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F G+CSCRDYW
Sbjct: 542 NRFHHFSKGSCSCRDYW 558
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 258/606 (42%), Positives = 373/606 (61%), Gaps = 22/606 (3%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKT-CKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L P PK RL EQ LT+L + C L + ++HA +LK G NP + +
Sbjct: 4 LKLPINTPK-----TRLTEQTILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTS 58
Query: 72 TCALSHWGSMDYACSIF------RQIDEPG--AFDFNTLIRGFVKEVEFEEALFL-YNEM 122
T S+ S+ YA S P AF FNTLIR + + + + FL Y M
Sbjct: 59 TS--SNLNSIHYATSFLFPPSHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTM 116
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY---GKC 179
GV P+ FTFP + K CA + +L+ G +HG V K GFE D+ V N+LI+MY G+
Sbjct: 117 LRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGE- 175
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+ EFA +F + +WSA+IA G S + LF EM P+E +VSV
Sbjct: 176 DGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVC-PDEITMVSV 234
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
LSAC LGAL+LGK + + +V + +LIDM+ KCG ++K + LFR M +
Sbjct: 235 LSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTI 294
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++++ +I+GLAMHG+G +A+S+F EM+ G+ PDDV ++GVLSACSH+GLV++G F
Sbjct: 295 VSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGS 354
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M+ + IVP V+HYGC+VDL+ R G + EA E +Q MP + N ++WR++++A L+
Sbjct: 355 MERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELK 414
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+GE +K L + H S+YVLLSN+YA+ ++W K+R M +G+ + PG +++EV
Sbjct: 415 LGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVN 474
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
++Y+FV+ D+SH + IYEM+ +M ++K GY P SQVL D+DE++K + L HS+
Sbjct: 475 NEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQVLLDIDEEDKEDALYRHSE 534
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLAIAFAL++ G+ IRI +NLR+C DCH+ TK IS +Y REI+VRDR RFH FK+G C
Sbjct: 535 KLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLC 594
Query: 600 SCRDYW 605
SCRD+W
Sbjct: 595 SCRDFW 600
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 243/612 (39%), Positives = 371/612 (60%), Gaps = 34/612 (5%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
LRLK + L +L+ C N + K +HAH+L+ F++ F AS L+A C S + YA
Sbjct: 13 TLRLKNPK-LVLLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAI 71
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+ QI P F +N LIRG E + Y + G+ PDN T P L KACA+L+
Sbjct: 72 RVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLE 131
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYG---------------------------- 177
GMQ HG K GFE D +VQNSL++MY
Sbjct: 132 NAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIA 191
Query: 178 ---KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
+C + A +F +M ++++ +WS +I+ +A N + + ++ F + E E+
Sbjct: 192 GYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVV-ANET 250
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
++V V+S+C HLGAL +G+ H ++RN +LN+I+ T+++DMY +CG +EK + +F +
Sbjct: 251 VMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQL 310
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+K L ++ +I+GLAMHG ++AL FSEM ++G P D+ + VL+ACSHAG+V GL
Sbjct: 311 PEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGL 370
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
F+ MK ++ + P ++HYGC+VDL+GRAG L +A + + MP++ N +WR+LL A ++
Sbjct: 371 EIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRI 430
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H N+E+GE K L ++ + YVLLSN+YARA +W DV +R M KG+ + PG+S
Sbjct: 431 HKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYS 490
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW-QLKFEGYSPDISQVLRDVDEDEKRER 533
L+E+ KV++F D++HP + I + + ++K GY + ++ + D+DE+EK
Sbjct: 491 LIEIDGKVHEFTIGDKTHPEIEKIERIWEDIILPKIKLAGYVGNTAETMFDIDEEEKEGA 550
Query: 534 LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHR 593
L HS+KLAIA+ ++ + +PIRI +NLR+C DCHT TKLIS ++E E+IVRDR RFH
Sbjct: 551 LHRHSEKLAIAYGIMKIRAPTPIRIVKNLRVCEDCHTATKLISKVFEVELIVRDRNRFHH 610
Query: 594 FKDGTCSCRDYW 605
FK+GTCSC DYW
Sbjct: 611 FKEGTCSCMDYW 622
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/557 (43%), Positives = 361/557 (64%), Gaps = 4/557 (0%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
K+HA +LK G +P L+ +CA S S+ YA SIF I P F FNT+IR
Sbjct: 6 KLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTIIRAHA- 64
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+ +L L+++M GV PD+FTFP + KACA+LQ G+ +H +FK+GF+ D++V
Sbjct: 65 DSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACARLQT---GLDLHSLLFKLGFDSDVYV 121
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
QN LI+ YG C ++FA F++M ++ + SWS++IA A NG E L LF M
Sbjct: 122 QNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGT 181
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+P+E I++SV+SA + LG L+LGK G + RN V + T+L+DM+ +CGC+E+ +
Sbjct: 182 VKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESM 241
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M ++ LT++ +I+GLA+HG+ EAL +F EM G +PD V + GVL ACSH G
Sbjct: 242 RVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGG 301
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV+EG F+ ++ EY + P +HYGC+VDL+GRAG+L EA + + MPI+ N ++WR+L
Sbjct: 302 LVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTL 361
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A H+ +E+ E + + +++S+H DYVLLSN+Y RW + A +R M K ++
Sbjct: 362 LGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRIS 421
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG SL+ V +++FV+ D +HP +++I E + M LK GY+PDIS VL D++E+
Sbjct: 422 KKPGCSLINVNHLIHEFVAGDNNHPQFESIREFLVSMIDSLKVVGYTPDISNVLFDIEEE 481
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK L HS+KLA+AFAL+ IR+ +NLR+C+DCH + K S ++EREII+RDR
Sbjct: 482 EKESTLGYHSEKLAVAFALLCFKDSRTIRVMKNLRICHDCHCFMKYASDVFEREIIIRDR 541
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F G+CSCRDYW
Sbjct: 542 NRFHHFSKGSCSCRDYW 558
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/591 (43%), Positives = 372/591 (62%), Gaps = 17/591 (2%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ EQ L++L TC L F ++H+ +LK G NP + AT SH+ ++ YA S+
Sbjct: 119 RVAEQTILSLLTTCDTLTTFTQIHSLILKLGLHHNPLVLTKFAATS--SHFNAVHYASSV 176
Query: 88 FRQIDEP------GAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKA 140
D+ AF FNTLIR F + + AL YN M V P+ FTFP + KA
Sbjct: 177 LFPNDQTTPPPSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKA 236
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY------GKCEKVEFASAIFKQMDQ 194
CA + L+ G +H + K GFE D V+N+L++MY G V A +F +
Sbjct: 237 CAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPV 295
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
K +WSA+I +A G + + LF EM P+E +VSVLSAC LGAL+LGK
Sbjct: 296 KDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVC-PDEITMVSVLSACADLGALELGKW 354
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
+ R +V + +LIDM+ KCG +++ + +FR M + ++++ MI GLAMHG+
Sbjct: 355 LESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGR 414
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
G EA+ +F EM+ +G++PDDV ++GVLSACSH+GLV++G F+ M+ + IVP ++HYG
Sbjct: 415 GLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYG 474
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
C+VD++ RAG + EALE +++MP++ N V+WRS+++A L++GE AK L +
Sbjct: 475 CMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPS 534
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
H S+YVLLSN+YA+ RW K+R M KG+ + PG +++E+ ++Y+FV+ D+SH
Sbjct: 535 HESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQ 594
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
+ IYEM+ +M ++K GY P SQVL D+DE++K + L HS+KLAIAFAL+ G+
Sbjct: 595 YKEIYEMVEEMGREIKRAGYVPTTSQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGT 654
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIRI +NLR+C DCH+ TK IS +Y REI+VRDR RFH FK+G CSC D+W
Sbjct: 655 PIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCGDFW 705
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 256/643 (39%), Positives = 385/643 (59%), Gaps = 43/643 (6%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
+++ + L +L T +P P + L + E T L C NL++F ++ + ++ GF
Sbjct: 3 LSKLNQLSSALKSTFNHKPTFKPTITLSILE----THLHNCHNLKQFNRILSQMILTGFI 58
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
+ F AS L+ S + +DY+ IF +I+ F +NT++R +++ E+AL LY
Sbjct: 59 SDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYK 118
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M + V PDN+T+P + +ACA G +IH HV KVGF+ D++VQN+LINMY C
Sbjct: 119 LMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCG 178
Query: 181 KVEFAS----------------------------------AIFKQMDQKSVASWSAIIAA 206
+ A +F +MD+K + SWSA+I+
Sbjct: 179 NMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISG 238
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NG++ E L +F EM N R +E ++VSVLSAC HL + GK HG +IR
Sbjct: 239 YEQNGMYEEALVMFIEM-NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIES 297
Query: 267 NVIVETSLI----DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
V ++ +LI DMY+KCGC+E L +F M +K +++ +I GLA++G + +L +F
Sbjct: 298 YVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMF 357
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
SEM G+ P+++ ++GVL AC H GLV+EG F M ++ I P V+HYGC+VDL+GR
Sbjct: 358 SEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGR 417
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG+L EA +LI+SMP+ + W +LL A K H + E+GE + L ++ H +VLL
Sbjct: 418 AGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLL 477
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN++A W DV ++R M +G+ ++PG SL+E V++F++ D++HP + + M+
Sbjct: 478 SNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGML 537
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
++M +LK EGY+PD ++V D+DE+EK L HS+KLAIAF L+ +S +PIRI +NL
Sbjct: 538 NEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNL 597
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+CNDCHT KLIS Y REI+VRDR RFH FK+G CSC DYW
Sbjct: 598 RICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/578 (42%), Positives = 369/578 (63%), Gaps = 7/578 (1%)
Query: 32 QECLTILKTCKNLE-EFKKVHAHVLKWGFF-WNPFCASNLV-ATCALSHWGSMDYACSIF 88
++C+++++ C + + + K++HA ++ G NP +L+ A +LS M +A IF
Sbjct: 35 RKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLS--APMSFAAQIF 92
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQAL 147
QI P F +NT+IRGF + A+ L+++M + PD TFP LFKA AKL +
Sbjct: 93 NQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDV 152
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G IH V + GF+ FVQNSL++MY + A +F+ M + +W+++I
Sbjct: 153 SLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGF 212
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A NG+ +E L L+ EM +E P+ +VS+LSAC LGAL LG+ H +++ N
Sbjct: 213 ALNGMPNEALTLYREMGSEGV-EPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQN 271
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+L+D+Y KCG +F M ++ ++++ +I GLA++G G EAL +F E+ R
Sbjct: 272 QHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELER 331
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
+GL+P ++ +VGVL ACSH G+++EG F RMK EY I+P ++H+GC+VDL+ RAG +G
Sbjct: 332 QGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVG 391
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A + I++MP+ N V+WR+LL A +H +LE+GE+A + ++ H D+VLLSN+YA
Sbjct: 392 DAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYA 451
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+RW DV +R M KG+ ++PG+SLVE+ +VY+F+ DRSHP + Y M+ ++
Sbjct: 452 SERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQ 511
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
LK EGY P VL D++E+EK L H++K+AIAF L++ G+PIRI +NLR+C D
Sbjct: 512 LLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCAD 571
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH KLIS ++EREIIVRDR RFH FKDG+CSC+DYW
Sbjct: 572 CHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/578 (42%), Positives = 369/578 (63%), Gaps = 7/578 (1%)
Query: 32 QECLTILKTCKNLE-EFKKVHAHVLKWGFF-WNPFCASNLV-ATCALSHWGSMDYACSIF 88
++C+++++ C + + + K++HA ++ G NP +L+ A +LS M +A IF
Sbjct: 35 RKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLS--APMSFAAQIF 92
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQAL 147
QI P F +NT+IRGF + A+ L+++M + PD TFP LFKA AKL +
Sbjct: 93 NQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDV 152
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G IH V + GF+ FVQNSL++MY E A +F+ M + +W+++I
Sbjct: 153 SLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGF 212
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A NG+ +E L L+ EM +E P+ +VS+LSAC LGAL LG+ H +++ N
Sbjct: 213 ALNGMPNEALTLYREMGSEGV-EPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQN 271
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+L+D+Y KCG +F M ++ ++++ +I GLA++G G EAL +F E+ R
Sbjct: 272 QHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELER 331
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
+GL+P ++ +VGVL ACSH G+++EG F RMK EY I+P ++H+GC+VDL+ RAG +G
Sbjct: 332 QGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVG 391
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A + I++MP+ N V+WR+LL A +H +LE+GE+A + ++ H D+VLLSN+YA
Sbjct: 392 DAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYA 451
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+RW DV +R M KG+ ++PG+SLVE+ +VY+F+ DRSHP + Y M+ ++
Sbjct: 452 SERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQ 511
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
LK EGY P VL D++E+EK L H++K+AIAF L++ G+PIRI +NLR+C D
Sbjct: 512 LLKIEGYVPRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCAD 571
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH KLIS ++EREIIVRDR RFH FKDG+CSC+DYW
Sbjct: 572 CHLAIKLISKVFEREIIVRDRSRFHHFKDGSCSCKDYW 609
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/585 (44%), Positives = 357/585 (61%), Gaps = 21/585 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
L +L+ CK L+ K+VHAH++ G ++ + S ++ +T +H A SIF I
Sbjct: 13 LQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTH------ALSIFNHI 66
Query: 92 DEPGAFDFNTLIRGFVK-EVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
P F +NTLI + A LY+ + ++P+ FTFP+LFKAC L+
Sbjct: 67 PNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRH 126
Query: 150 GMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +H HV K + CD FVQ +L+N Y KC KV +F Q+ + +ASW++I++A+
Sbjct: 127 GRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYV 186
Query: 209 SNG--------LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
N L E L LF EM + + E LV+++SAC LGAL G H ++
Sbjct: 187 HNSGAICEDVSLSLEVLTLFIEMQ-KSLIKANEVTLVALISACAELGALSQGAWAHVYVL 245
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
++ LN V T+LIDMY KCGCL+ LF + + L Y+ MI G A+HG G +AL
Sbjct: 246 KHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALD 305
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F +M EGL PDDV V + +CSH GLV EG F+ MK Y + P ++HYGC+VDL+
Sbjct: 306 LFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLL 365
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG L EA E + +MP++ N V+WRSLL A++VH NLEIGE+ K+L Q+ +YV
Sbjct: 366 GRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYV 425
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSNMYA RW DV ++R M G+N+ PG SLVEV +++F+ D++HP IY
Sbjct: 426 LLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYL 485
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ +M +L G+ P +VL D++E+EK + L HS++LAIAFALI +PIRI +
Sbjct: 486 KLEEMSRRLHEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIK 545
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCHT +KLIS IYEREIIVRDR RFH FK+G CSC DYW
Sbjct: 546 NLRVCGDCHTSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 590
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 256/587 (43%), Positives = 361/587 (61%), Gaps = 20/587 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L L+ C NL K+VHA +L G + + S+L+ T S + S YA +IF I P
Sbjct: 9 LQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTS--SKFAST-YAFTIFNHIPNP 65
Query: 95 GAFDFNTLIRGFVKEVE-FEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F +NTLI + A LYN + + ++P++FTFP+LFKACA L+ G
Sbjct: 66 TLFLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPP 125
Query: 153 IHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H HV K + D FVQNSL+N Y K K+ + +F Q+ + +A+W+ ++AA+A +
Sbjct: 126 LHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSA 185
Query: 212 -------------LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+ E L LF +M + +P E LV+++SAC++LGAL G HG
Sbjct: 186 SHVSYSTSFEDADMSLEALHLFCDMQLSQI-KPNEVTLVALISACSNLGALSQGAWAHGY 244
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++RN LN V T+L+DMY KCGCL LF ++D+ Y+ MI G A+HG G +A
Sbjct: 245 VLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQA 304
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L ++ M E L PD V + ACSH GLV EGL F+ MK + + P ++HYGC++D
Sbjct: 305 LELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLID 364
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA E +Q MP++ N ++WRSLL A+K+H NLE+GE A K+L ++ +
Sbjct: 365 LLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGN 424
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSNMYA RW DV ++R M G+++ PGFSLVE+ +++F++ D++HP I
Sbjct: 425 YVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDKAHPFSKEI 484
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y I ++ +L G+ P S+VL DV+E++K + L HS++LAIAFALI S PIRI
Sbjct: 485 YSKIGEINRRLLEYGHKPRTSEVLFDVEEEDKEDFLSYHSERLAIAFALIASSSSMPIRI 544
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TKLIS Y+R+IIVRDR RFH FKDG+CSC DYW
Sbjct: 545 IKNLRVCGDCHAITKLISAAYQRDIIVRDRNRFHHFKDGSCSCLDYW 591
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/581 (42%), Positives = 364/581 (62%), Gaps = 8/581 (1%)
Query: 32 QECLTILKT--CKNLEEFKKVHAHVLKWGF-FWNPFCASNLV-ATCALSHWGSMDYACSI 87
++C+ +L+T ++ + +++HA ++ G + +L+ +L M YA +
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 88 FRQIDEP-GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQ 145
F +I++P F +NTLIRG+ + A LY EM G VEPD T+P L KA +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
++ G IH V + GF ++VQNSL+++Y C V A +F +M +K + +W+++I
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG E L L+ EMN+ K +P+ +VS+LSAC +GAL LGK H +I+
Sbjct: 196 GFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N+ L+D+Y +CG +E+ LF M DK ++++ +I GLA++G GKEA+ +F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 326 -LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
EGL P ++ +VG+L ACSH G+V EG F RM+ EY+I P ++H+GC+VDL+ RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ +A E I+SMP+Q N V+WR+LL A VH + ++ E A + Q+ +H DYVLLSN
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 434
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
MYA QRW DV KIR +M G+ + PG SLVEV +V++F+ D+SHP D IY + +
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M +L+ EGY P IS V DV+E+EK + HS+K+AIAF LI + SPI + +NLR+
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 554
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH KL+S +Y REI+VRDR RFH FK+G+CSC+DYW
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/572 (41%), Positives = 360/572 (62%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
ILK C L+ E +++HA ++K GF + F + L+ A + G ++ A +F ++ E
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYA--NCGEVEVARRVFDEMSE 187
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N++ G+ K +EE + L++EM E + D T ++ AC +L L+ G I
Sbjct: 188 RNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWI 247
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
+ +V + G + + + SL++MY KC +V+ A +F QMD++ V +WSA+I+ ++
Sbjct: 248 NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRC 307
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L LF EM P E +VS+LS+C LGAL+ GK H + + L V + T+
Sbjct: 308 REALDLFHEMQKANI-DPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTA 366
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+D Y KCG +E + +F M K L+++V+I GLA +GQGK+AL F ML + +EP+
Sbjct: 367 LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPN 426
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV ++GVLSACSHAGLV+EG F M ++ I P ++HYGC+VD++GRAG++ EA + I
Sbjct: 427 DVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFI 486
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
++MPIQ N V+WR+LL++ KVH N+EIGE + K L + H DY+LLSN+YA RW
Sbjct: 487 KNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWE 546
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
D K+R EM KG+ ++PG SL+E+ +++F ++D H + IY I M Q+K G
Sbjct: 547 DALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAG 606
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y P+ ++ D +ED+K + HS+KLAIAF LI G+ IRI +NLR+C DCH TK
Sbjct: 607 YVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATK 666
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L+S ++ REI+VRDR RFH FK+G+CSC DYW
Sbjct: 667 LVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 227/409 (55%), Gaps = 16/409 (3%)
Query: 11 LLLTQPEEPPKGPELNLRLK---EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS 67
+ +T P P K P + E IL+ CK + + ++HAH++K P A
Sbjct: 1 MAVTLPLLPAKTPTAKTSISLFPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAE 60
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
NL+ + A+ SMDYA SIFRQIDEP + +N +IRGF + EA+ L+ EM E V
Sbjct: 61 NLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSV 120
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+PD FTFP + K C++LQAL EG QIH + K GF FV+N+LI+MY C +VE A
Sbjct: 121 QPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARR 180
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F +M +++V +W+++ A + +G W E +KLF EM E R +E LVSVL+AC L
Sbjct: 181 VFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEM-LELDIRFDEVTLVSVLTACGRLA 239
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L+LG+ + + N + TSL+DMY KCG ++ LF M + + +S MIS
Sbjct: 240 DLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMIS 299
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKL 362
G + + +EAL +F EM + ++P+++ V +LS+C+ G + G + RMKL
Sbjct: 300 GYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKL 359
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
TV ++D + G + ++E+ MP+ +N + W L+
Sbjct: 360 ------TVTLGTALMDFYAKCGSVESSIEVFGKMPV-KNVLSWTVLIQG 401
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/576 (41%), Positives = 358/576 (62%), Gaps = 5/576 (0%)
Query: 35 LTILKT-CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+ LKT C ++ + K+ HA +L+ NP +S L++ ALSH G ++YA +F Q+
Sbjct: 14 VDFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQN 73
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P F NT+IRG+ + EA+ LY M ERGV DN+T+P + ACA+L A+K G +
Sbjct: 74 PDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRF 133
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V K GF DLFV N+LI Y C A +F + + V +W+ +I AH + GL
Sbjct: 134 HCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLS 193
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG---SLIRNISALNVIV 270
+ L EM RP+E +VS++ AC LG L+ GK H L + ++++
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVL 253
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
ET+L+DMY KCG ++ L +FR M + T++ +I GLAMHG G++A+S+F +M + L
Sbjct: 254 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKL 313
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PDDV ++ +L ACSHAGLV+EGL F MK +++I P ++HYGCVVDL+ RA + +AL
Sbjct: 314 MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 373
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
I++MPI+ N V+W +LL A + + ++ E + + ++ YV+LSN+YA
Sbjct: 374 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVS 433
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W K+R +M +KG+ ++PG S +E+ +++FV+ DRSH + IY MI +M ++
Sbjct: 434 QWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 493
Query: 511 FE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
+ G+ P + VL D++E+EK L HS+KLAIA LI GSPIRI +NLR+CNDCH
Sbjct: 494 LDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCH 553
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ K+ S +Y REI+ RDR RFH FK+G+CSC D+W
Sbjct: 554 SFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 589
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/612 (40%), Positives = 370/612 (60%), Gaps = 48/612 (7%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
CK +++ K++HA ++K +P A+ L+ A+S +DYA IFR + P F +N
Sbjct: 21 CKTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYN 80
Query: 101 TLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
TLIR + + +AL ++ EM E VEP+ FTFP++FKAC + + L+EG Q+HG K
Sbjct: 81 TLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVK 140
Query: 160 VGFECDLFVQNSLINMYGKCE--------------------------------------- 180
G + D FV ++++ MY C
Sbjct: 141 FGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMI 200
Query: 181 -------KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
++E A +F +M Q+SV SW+ +IA +A +G + E +++F EM + P
Sbjct: 201 DGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEV-PPNY 259
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
LVSVL A + LGAL+LGK H +RN ++ ++ ++LIDMY KCG +EK L +F
Sbjct: 260 VTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEG 319
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ + +T+S +I+GLAMHG+ K+ L F +M R G+ P DV Y+G+LSACSHAGLVNEG
Sbjct: 320 LPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEG 379
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
FD M + P ++HYGC+VDL+GRAG+L E+ ELI +MPI+ +DV+W++LL A K
Sbjct: 380 RWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACK 439
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
+H N+E+G+ A++L ++ H YV LSN+YA W VAK+R M + + PG
Sbjct: 440 MHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGC 499
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S +E+ +++F+ +D SHP I+ M+ +M L GY P+ +QVL ++DE++K
Sbjct: 500 SWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPNTTQVLTNMDEEDKESS 559
Query: 534 LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHR 593
L HS+K+AIAF LI +P+RI +NLR+C DCH+ KLIS IY+R+IIVRDRKRFH
Sbjct: 560 LNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRFHH 619
Query: 594 FKDGTCSCRDYW 605
F +G+CSC DYW
Sbjct: 620 FVNGSCSCMDYW 631
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/581 (42%), Positives = 364/581 (62%), Gaps = 8/581 (1%)
Query: 32 QECLTILKT--CKNLEEFKKVHAHVLKWGF-FWNPFCASNLV-ATCALSHWGSMDYACSI 87
++C+ +L+T +L + +++HA ++ G + +L+ +L M YA +
Sbjct: 16 EKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 88 FRQIDEP-GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQ 145
F +I++P F +NTLIRG+ + A+ LY EM G VEPD T+P L KA K+
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMA 135
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
++ G IH V + GF ++VQNSL+++Y C V A +F +M +K + +W+++I
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG E L L+ EM+ K +P+ +VS+LSAC +GAL LGK H +I+
Sbjct: 196 GFAENGKPEEALALYTEMD-LKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLT 254
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N+ L+D+Y +CG +E+ LF M DK ++++ +I GLA++G GKEA+ +F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNM 314
Query: 326 -LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+EGL P ++ +VG+L ACSH G+V EG F RM EY+I P ++H+GC+VDL+ RAG
Sbjct: 315 ESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAG 374
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ +A E I MP+Q N V+WR+LL A VH + ++ E+A + Q+ +H DYVLLSN
Sbjct: 375 QVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSN 434
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
MYA QRW DV KIR +M G+ + PG SLVEV +V++F+ D+SHP D IY + +
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKE 494
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M +L+ EGY P IS V DV+E+EK L HS+K+AIAF LI + PIR+ +NL++
Sbjct: 495 MTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKV 554
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH KL+S +Y REI+VRDR RFH FK+G+CSC+DYW
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/577 (41%), Positives = 351/577 (60%), Gaps = 1/577 (0%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
L + + +K C + + K + AH+++ + F S L+ + A++ G + YA IF
Sbjct: 5 LDQGSLVAAIKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIF 64
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
P F +NT+IRG+ A+ LY +MF G+ P+++TF + KAC KL L
Sbjct: 65 SCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLC 124
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
EG ++H + KVG + + + N LI +Y C +++A +F +M + ASWS +++ +A
Sbjct: 125 EGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYA 184
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
NG E LKLF EM E + L SV+ C LGALDLGK H + + ++V
Sbjct: 185 QNGQAVEALKLFREMQAENV-SSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDV 243
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
++ T+L+ MY KCG L+ L +F+ MA++ +S MI+G A+HG G++AL +F M R
Sbjct: 244 VLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRS 303
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
P+ V + VLSACSH+GLV +G F+ M EY+I P ++HYGC+VDL RAGM+G
Sbjct: 304 KTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGH 363
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A + IQ+MPI+ N V+WR+LL A K H ++GE ++ + +++ P +YVL+SN+YA
Sbjct: 364 AHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYAS 423
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
RW V ++R+ M K + G+S +E+ V+KF+ D SHP + IY M+HQM +
Sbjct: 424 LGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQMARK 483
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
LK G+ VL D+DE+EK L HS++LAIA+ L+H GSPIRI +NLR+C DC
Sbjct: 484 LKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVCRDC 543
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H KLIS +Y REIIVRDR RFH F++ CSC DYW
Sbjct: 544 HEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/613 (39%), Positives = 361/613 (58%), Gaps = 30/613 (4%)
Query: 23 PELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
P L+ + L L +C + E K+ H+ +++ G + ++ CA+S G ++
Sbjct: 12 PSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLN 71
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
YA +F +I P A+ +NT+ RG+++ +F+Y+ M + V P+ FT+P L +AC
Sbjct: 72 YALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACC 131
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
A++EG QIH HV K GF D F N+LI+MY + +E A +F M Q+ V SW++
Sbjct: 132 IDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTS 191
Query: 203 IIAAHASNGLWSECLKLFGEM--NNEKCW-----------------------RPEESIL- 236
+I ++ G + ++F M N W R E +L
Sbjct: 192 LITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLD 251
Query: 237 ----VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
S+LSACT LGAL+ GK HG + ++ L+ + T++IDMY KCGCLEK +F
Sbjct: 252 KFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFN 311
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+ K +++ MI GLAMHG+G+ A+ +F EM RE + PD + +V VLSAC+H+GLV E
Sbjct: 312 ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE 371
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G F M + P ++H+GC+VDL+GRAG+L EA +LI MP+ + V +L+ A
Sbjct: 372 GKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGAC 431
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
++H N E+GE K + ++ H+ YVLL+N+YA A RW DVAK+R M +G+ ++PG
Sbjct: 432 RIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPG 491
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
FS++E V +F++ R+HP IY + ++ ++ GY PD VL D+DE+EK
Sbjct: 492 FSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKEN 551
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L HS+KLAIAF L+ G +RI++NLR+C DCH +KLIS +Y+REII+RDR RFH
Sbjct: 552 PLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFH 611
Query: 593 RFKDGTCSCRDYW 605
F+ G CSC+DYW
Sbjct: 612 HFRMGGCSCKDYW 624
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/574 (41%), Positives = 363/574 (63%), Gaps = 6/574 (1%)
Query: 35 LTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++++ C +L E+ K++H + ++ G + + LV A G+++ A +F ++
Sbjct: 225 VSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA--KCGNVNTAHKLFERM 282
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N +I G+ + EAL +N M RG++P++ T ++ ACA L AL++G
Sbjct: 283 PIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQ 342
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIHG+ + GFE + V N+L+NMY KC V A +F++M +K+V +W+AII+ ++ +G
Sbjct: 343 QIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHG 402
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E L LF EM + +P+ +VSVL AC H AL+ GK HG IR+ NV+V
Sbjct: 403 HPHEALALFIEMQAQGI-KPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T L+D+Y KCG + LF M ++ ++++ MI +HG G++AL++FS+M G +
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTK 521
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D + + +L+ACSHAGLV++GL F MK +Y + P ++HY C+VDL+GRAG L EA
Sbjct: 522 LDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANG 581
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I++M ++ + VW +LL A ++H N+E+GE AAK+LF+++ + YVLLSN+YA AQR
Sbjct: 582 IIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQR 641
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DVAK+R M KG+ + PG S+V V R V F+ DR+HP + IY M+ + Q++
Sbjct: 642 WEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRK 701
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P+ + L+DV+E+ K L HS+KLAI+F +I+ S G PIRI +NLR+C+DCH
Sbjct: 702 AGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNA 761
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I REIIVRD RFH K+G CSC DYW
Sbjct: 762 TKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/387 (32%), Positives = 207/387 (53%), Gaps = 14/387 (3%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L+++K C +L+ +KVH ++ GF + + L + + GS++ A +F ++
Sbjct: 124 LSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASM--YTKCGSLENARQVFDRM 181
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N +I G+ + + EAL L++EM G++P++ T ++ CA L AL++G
Sbjct: 182 PKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGK 241
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH + + G E D+ V N L+NMY KC V A +F++M + VASW+AII ++ N
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNS 301
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E L F M + +P +VSVL AC HL AL+ G+ HG IR+ N +V
Sbjct: 302 QHHEALAFFNRM-QVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG 360
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L++MY KCG + LF M K + ++ +ISG + HG EAL++F EM +G++
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIK 420
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
PD V VL AC+H + +G R E +V +VD+ + G +
Sbjct: 421 PDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTG----LVDIYAKCGNVNT 476
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A +L + MP +Q+ V W +++ A +H
Sbjct: 477 AQKLFERMP-EQDVVSWTTMILAYGIH 502
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 171/332 (51%), Gaps = 10/332 (3%)
Query: 88 FRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
F Q D A + I G+VK + +AL LY +M G+ PD F ++ KAC
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L+ G ++H + GFE D+ V +L +MY KC +E A +F +M ++ V SW+AIIA
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
++ NG E L LF EM +P S LVSV+ C HL AL+ GK H IR+
Sbjct: 196 YSQNGQPYEALALFSEMQVNGI-KPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIES 254
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V+V L++MY KCG + LF M + +++ +I G +++ Q EAL+ F+ M
Sbjct: 255 DVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQ 314
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRA 383
G++P+ + V VL AC+H + +G R E V +V++ +
Sbjct: 315 VRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG----NALVNMYAKC 370
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G + A +L + MP ++N V W +++S H
Sbjct: 371 GNVNSAYKLFERMP-KKNVVAWNAIISGYSQH 401
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 17/269 (6%)
Query: 189 FKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
F Q D + + W I + NG W++ L+L+ +M P++ + +SV+ AC
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGI-NPDKLVFLSVIKACGSQS 134
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L G+ H +I +VIV T+L MY KCG LE +F M + ++++ +I+
Sbjct: 135 DLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIA 194
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYR 365
G + +GQ EAL++FSEM G++P+ V V+ C+H + +G + C+ +
Sbjct: 195 GYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCY---AIRSG 251
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLL---SASKVHHNLEIG 421
I V +V++ + G + A +L + MPI+ DV W +++ S + HH
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR--DVASWNAIIGGYSLNSQHHE---- 305
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+A N Q+ P+ ++S + A A
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAH 334
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/625 (38%), Positives = 366/625 (58%), Gaps = 49/625 (7%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
+ E L++ +TCK++ K++H+ +K G NP + +++ C +G M YA +F
Sbjct: 12 VTENPPLSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLF 71
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I EP F +N + +G+ + + + LY EM ER V+PD +T+P LFK + AL+
Sbjct: 72 DTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQ 131
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK-----------------Q 191
G ++H HV K G + ++F N+LINMY C ++ A IF
Sbjct: 132 LGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYN 191
Query: 192 MDQKSVASWSAIIAAHASNG-------------------------------LWSECLKLF 220
+K V SW+AI+ + G + E L LF
Sbjct: 192 RIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLF 251
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
EM K +P+E +VSVL+AC LGAL+LG+ + +N + V +LIDMY K
Sbjct: 252 REMQTSKI-KPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFK 310
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG +E L +F + + + T++ M+ GLA++G G+EAL++FS+ML+ + PD+V YVGV
Sbjct: 311 CGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGV 370
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
LSAC+H G+V+EG F M + I P + HYGC+VDL+G+AG L EA E+I++MP++
Sbjct: 371 LSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKP 430
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N +VW +LL A ++H + E+ E A + + ++ ++ + YVL N+YA +W + ++R
Sbjct: 431 NSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQ 490
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M +G+ ++PG SL+E+ V++FV+ D+SHP IY +++M LK GYSP+ S+
Sbjct: 491 VMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLNKMTSDLKIAGYSPNTSE 550
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
V D+ E++K + HS+KLAIAF LI+ G IRI +NLRMC DCH KL+S +Y+
Sbjct: 551 VFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGVTIRIVKNLRMCIDCHHVAKLVSKVYD 610
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
RE+IVRDR RFH F+ G+CSC+DYW
Sbjct: 611 REVIVRDRTRFHHFRHGSCSCKDYW 635
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/603 (39%), Positives = 367/603 (60%), Gaps = 30/603 (4%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ L +L+ C N+EE +++H +LK G + AS L+A CA + GS+ YA ++F +I
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P F +NT+IRG+ E EEAL LY+ M V + +TFP L KAC+ + AL+E Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH H+ K+GF +++ NSL+N+Y K ++ A +F Q+DQ+ SW+++I + G
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 213 WSECLKLFGEM--NNEKCW-----------RPEESI-----------------LVSVLSA 242
++F M N W +P+E++ LVS L A
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C LG LD GK H + ++ ++ I+ LIDMY KCG LE+ + +FR M +K +
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MISG A+HG+G+EAL F +M G+EP+ + + G+L+ACSHAGLV+E L F+ M+
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ P+++HYGC+VDL+GRAG+L EA ELI++MP++ N +W +LL+A +H NLE+G+
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGK 439
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
K L Q++ H Y+ L++++A A W A++R +M +G+++ PG S++ V
Sbjct: 440 QIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTA 499
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F++ D SHP I M+ Q+ +L+ EGY P + +L D+++ EK + HS+KLA
Sbjct: 500 HEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLA 559
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+ F LI G IRI +NLR+C DCHT KLIS +Y REI++RDR RFH FKDG C+C
Sbjct: 560 VTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCG 619
Query: 603 DYW 605
DYW
Sbjct: 620 DYW 622
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/603 (39%), Positives = 366/603 (60%), Gaps = 30/603 (4%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ L +L+ C N+EE +++H +LK G + AS L+A CA + GS+ YA ++F +I
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P F +NT+IRG+ E EEAL LY+ M V + +TFP L KAC+ + A +E Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQ 139
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH H+ K+GF +++ NSL+N+Y K ++ A +F Q+DQ+ SW+++I + G
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199
Query: 213 WSECLKLFGEM--NNEKCW-----------RPEESI-----------------LVSVLSA 242
++F M N W +P+E++ LVS L A
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C LG LD GK H + ++ ++ I+ LIDMY KCG LE+ + +FR M +K +
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MISG A+HG+G+EAL F +M G+EP+ + + G+L+ACSHAGLV+E L F+ M+
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ P+++HYGC+VDL+GRAG+L EA ELI++MP++ N +W +LL+A +H NLE+G+
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGK 439
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
K L Q++ H Y+ L++++A A W A++R +M +G+++ PG S++ V
Sbjct: 440 QIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTA 499
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F++ D SHP I M+ Q+ +L+ EGY P + +L D+++ EK + HS+KLA
Sbjct: 500 HEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKLA 559
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+ F LI G IRI +NLR+C DCHT KLIS +Y REI++RDR RFH FKDG C+C
Sbjct: 560 VTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTCG 619
Query: 603 DYW 605
DYW
Sbjct: 620 DYW 622
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/574 (41%), Positives = 352/574 (61%), Gaps = 12/574 (2%)
Query: 38 LKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
LK+C L+ + V A+ +K G + F S+L+ A+C G + A +F
Sbjct: 127 LKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASC-----GDVAAARLVFDAA 181
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+E G +N ++ ++K ++ E + ++ M E GV D T ++ AC ++ K G
Sbjct: 182 EESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGK 241
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+ GHV + G + + +L++MY KC ++ A +F M + V +WSA+I+ +
Sbjct: 242 WVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQAD 301
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E L LF EM + P + +VSVLSAC LGAL+ GK H + R +L I+
Sbjct: 302 QCREALGLFSEMQLARV-EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG 360
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+D Y KCGC++ + F M K T++ +I G+A +G+G+EAL +FS M G+E
Sbjct: 361 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIE 420
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P DV ++GVL ACSH+ LV EG FD M +Y I P V+HYGC+VDL+GRAG++ EA +
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I++MPI+ N V+WR+LLS+ VH N+ IGE A K + +N H DYVLLSN+YA A +
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W D A +R EM +G+ ++PG SL+E+ V++F ++D HP IY+ + +M ++K
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKV 600
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P+ + V +V+E EK + HS+KLAIAF L+ L G+ IR+++NLR+C DCH+
Sbjct: 601 AGYVPNTADVRLEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSA 660
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS +Y+REI+VRDR FH FKDGTCSC DYW
Sbjct: 661 TKLISKVYDREIVVRDRNIFHHFKDGTCSCNDYW 694
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 183/367 (49%), Gaps = 7/367 (1%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD--FNTLIR 104
++HA ++K G + + + A + + YA S+FR P +N L+R
Sbjct: 32 LPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91
Query: 105 GFVKEVEFEEALFLYNEMFE--RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
F+ E+AL L+ EM D T K+C+++ AL G + + K G
Sbjct: 92 AFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGL 151
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
D FV +SLI+MY C V A +F ++ V W+AI+AA+ NG W E +++F
Sbjct: 152 VADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKG 211
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E +E LVSV++AC +G LGK G + A N + T+L+DMY KCG
Sbjct: 212 M-LEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCG 270
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ K LF M + + +S MISG Q +EAL +FSEM +EP+DV V VLS
Sbjct: 271 EIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLS 330
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
AC+ G + G ++ + R+ T +VD + G + +A+E +SMP+ +N
Sbjct: 331 ACAVLGALETGKWVHSYVRRK-RLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV-KNS 388
Query: 403 VVWRSLL 409
W +L+
Sbjct: 389 WTWTALI 395
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/640 (38%), Positives = 375/640 (58%), Gaps = 63/640 (9%)
Query: 28 RLKEQECLTIL--KTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+L ++ L + K+ +L+ ++HA VL+ G F + + + L+ A H+ + D+A
Sbjct: 28 KLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFAL 87
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F I P F +N +I+G ++ + +A++ Y M P+ FT+P LFKAC+ Q
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQ 146
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQ------------------------------NSLINM 175
A++EG QIHGHV K G D+ ++ N++I+
Sbjct: 147 AVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDG 206
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCW---- 229
Y KC +E A +F QM K++ SW+ +I A G + KLF EM+ +E W
Sbjct: 207 YLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMV 266
Query: 230 ------------------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
RP IL SVL+AC+++GA+D G+ H L RN
Sbjct: 267 DGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIK 326
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
L+ ++ T+L+DMY KCG L+ G +F M ++ T++ MI GLA+HG+ ++AL +FS++
Sbjct: 327 LDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL 386
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
++P+ + VGVL+AC+HAG V++GL F M+ Y + P ++HYGC+VDL+GR+G+
Sbjct: 387 QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGL 446
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
EA +LI SMP++ N VW +LL A ++H N ++ E K L ++ + YVLLSN+
Sbjct: 447 FSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNI 506
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA+ R+ DV+KIR M ++G+ PG S+V++ V++F D SHP IY + +
Sbjct: 507 YAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKII 566
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+ +L+ G+SPD SQVL D+DE+EK + HS+KLAIAF LI+ G I I +NLR+C
Sbjct: 567 KERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVC 626
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+DCH+ TKLIS I++REIIVRDR R+H FK+GTCSC+D+W
Sbjct: 627 DDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/568 (40%), Positives = 357/568 (62%), Gaps = 3/568 (0%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L +C+NL + ++VHA + G F N A+ L+ G+++ A +F + + +
Sbjct: 60 LLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYM--YVERGALEDAQELFDGMSKRHPY 117
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
++ ++ G+ K F +++ E+ G D+++ P + +AC L+ LK G IH
Sbjct: 118 SWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCIT 177
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K G + FV +L++MY +C+ VE A IF +M ++ +A+W+ +I A A +G+ E L
Sbjct: 178 LKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESL 237
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F M N+ P++ LV+V+ AC LGA++ K H + +L+VI+ T++IDM
Sbjct: 238 VFFDRMRNQGI-VPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDM 296
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG +E +F M + +T+S MI+ HGQG++AL +F MLR G+ P+ + +
Sbjct: 297 YAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITF 356
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
V +L ACSHAGL+ EG F M EY + P V+HY C+VDL+GRAG L EALE+I+ MP
Sbjct: 357 VSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMP 416
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
+++++V+W +LL A ++H +L++ E A++L ++ S P YVLLSN+YA A +W D+AK
Sbjct: 417 VEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAK 476
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
R M GL + PG + +EV K+Y+F D++HP + IY+M+ ++ +L+ GY PD
Sbjct: 477 TRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPD 536
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
+ VL DVDE+ K+ L HS+KLAIAF L+ L QG PIRI +NLR+C DCHT+ K +S+
Sbjct: 537 TNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSL 596
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I ++ IIVRD KRFH FK+G CSCRDYW
Sbjct: 597 IEQKTIIVRDAKRFHHFKEGVCSCRDYW 624
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/641 (39%), Positives = 375/641 (58%), Gaps = 63/641 (9%)
Query: 28 RLKEQECLTIL--KTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+L ++ L +L K+ +L K+VHA L+ G F + + + LV A H+ ++++A
Sbjct: 25 QLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFAL 84
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F + P F FN +I+G ++ E +A+ Y +M P+ FT+P LFKAC +
Sbjct: 85 KVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAE 144
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYG---------------------------- 177
A +EG+Q+H HV K G D+ ++++ I MYG
Sbjct: 145 AAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMID 204
Query: 178 ---KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCW--- 229
KC +VE A +F M+ K+V SW+ +++ A G+ E +LF EM NE W
Sbjct: 205 GYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAM 264
Query: 230 -------------------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
RP + +L SVL+AC +LGALD G+ H + N +
Sbjct: 265 IDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSN 324
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ + ++ T+L+DMY KCG L+ +F M K T++ MI GL MHG+ ++A+ +F +
Sbjct: 325 SFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFK 384
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M ++ P+ + +GVLSAC+H+G+V+EGL F+ M+ Y I P ++HYGCVVDL+GRAG
Sbjct: 385 MQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAG 444
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+LGEA E++ SMP++ + VW +LL A + H ++E+GE K L ++ + Y LLSN
Sbjct: 445 LLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSN 504
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YARA RW DVA +R M +G+ S G S+++ V++F D SHP NIY M+
Sbjct: 505 IYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKN 564
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M +LK EG+SP+ SQVL D++E+EK L+ HS+KLAIAF LI+ G+ I + +NLRM
Sbjct: 565 MIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRM 624
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH+ KLIS +Y+REIIVRDR R+H FK GTCSC+D+W
Sbjct: 625 CEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/602 (41%), Positives = 358/602 (59%), Gaps = 34/602 (5%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C + +E K++H HVLK G +PF ++L+
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 72 ----TCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + G +D A +F +I A +N +I G+ + FEEAL + EM
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR 257
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V P+ T + ACA+ +L+ G + + G +L + N+LI+MY KC ++
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + +K + SW+ +I ++ + E L LF +M P + VS+L AC
Sbjct: 318 ARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNV-EPNDVTFVSILPACA 376
Query: 245 HLGALDLGKCTHGSLIRNISAL-NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+LGALDLGK H + + L N + TSLIDMY KCG +E +F M K +++
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWN 436
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MISGLAMHG AL +F +M EG EPDD+ +VGVLSACSHAGLV G CF M +
Sbjct: 437 AMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVED 496
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y I P +QHYGC++DL+GRAG+ EA L+++M ++ + +W SLL A +VH N+E+GE
Sbjct: 497 YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEF 556
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAK+LF++ +P YVLLSN+YA A RW DVA+IRT++ KG+ + PG S +EV V+
Sbjct: 557 AAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVH 616
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
+F+ D+ H +IY+M+ +++ L+ G+ PD S+VL D+DE+ K L HS+KLAI
Sbjct: 617 EFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAI 676
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF LI + IRI +NLR+C +CH+ KLIS I+ REII RDR RFH FKDG+CSC D
Sbjct: 677 AFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMD 736
Query: 604 YW 605
YW
Sbjct: 737 YW 738
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 230/440 (52%), Gaps = 37/440 (8%)
Query: 10 SLLLTQPE---EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCA 66
SL++ P +P P L L+ LT+L TCK+ + K++H+ ++K G F
Sbjct: 9 SLVMPPPTLHFQPTSDPPYKL-LQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFAL 67
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
S L+ CA+S +G++ YA +F I++P F +NT+IRG A+ Y M G
Sbjct: 68 SKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCG 127
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
VEP+++TFP L K+CAK+ A +EG QIHGHV K+G E D FV SLINMY + ++ +A
Sbjct: 128 VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAE 187
Query: 187 AI-------------------------------FKQMDQKSVASWSAIIAAHASNGLWSE 215
+ F+++ + SW+A+IA +A +G + E
Sbjct: 188 LVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEE 247
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L F EM P ES +V+VLSAC G+L+LG + + N+ + +LI
Sbjct: 248 ALAFFQEMKRANV-APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KCG L+K LF + +K ++++VMI G + KEAL++F +M + +EP+DV
Sbjct: 307 DMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDV 366
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+V +L AC++ G ++ G + ++ + + ++D+ + G + A ++
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426
Query: 396 MPIQQNDVVWRSLLSASKVH 415
M ++ W +++S +H
Sbjct: 427 MK-PKSLGSWNAMISGLAMH 445
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 18/282 (6%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N+ E +T+L C +LE V + + G SNL AL S
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGL------GSNLRLVNALIDMYSKC 312
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F I E +N +I G+ ++EAL L+ +M + VEP++ TF ++
Sbjct: 313 GDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSIL 372
Query: 139 KACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA L AL G IH ++ K +G + + SLI+MY KC +E A +F M KS
Sbjct: 373 PACAYLGALDLGKWIHAYIDKKFLGL-TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS 431
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ SW+A+I+ A +G + L+LF +M +E + P++ V VLSAC+H G ++LG+
Sbjct: 432 LGSWNAMISGLAMHGHANMALELFRQMRDEG-FEPDDITFVGVLSACSHAGLVELGRQCF 490
Query: 257 GSLIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMADK 297
S++ + + +ID+ + G ++ L + M K
Sbjct: 491 SSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK 532
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/488 (45%), Positives = 329/488 (67%), Gaps = 5/488 (1%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M ER P+ FT+P + KACA + L G +HG V K GF ++ VQN+L++MY C
Sbjct: 1 MLERKKLPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRG 60
Query: 182 ----VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+EFA +F +M + SWSA+I + G S+ + LF EM + P+E +V
Sbjct: 61 GEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVC-PDEITMV 119
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
SVLSACT LGAL+LGK + + NV + +LIDM+ KCG ++K LFR M ++
Sbjct: 120 SVLSACTGLGALELGKWVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRER 179
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ +I GLAMHG+G EA+++F EM+R G+ PDDVV++G+LSACSH+GLV++G F
Sbjct: 180 NIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYF 239
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
D M+ ++ IVP ++HYGC+VD++ RAG++ EAL+ +Q MPI N VVWR+L++A + H
Sbjct: 240 DSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGE 299
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
L++GE + L + H S+YVLLSN+YA+ W +IR M KG+ + PG +++E
Sbjct: 300 LKLGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIE 359
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
+ ++Y+FV+ D+SH IYEM+ +M ++K GY P ++VL D+D+++K + L H
Sbjct: 360 LDNEIYEFVAGDKSHAQSKEIYEMVDEMGKEMKRAGYMPTTTEVLLDIDDEDKEDTLNRH 419
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLAIAFAL++ G+ IRI +NLR+C+DCH+ +K IS IY REI+VRDR RFH FK+G
Sbjct: 420 SEKLAIAFALLNTPPGTLIRIVKNLRVCDDCHSASKFISKIYNREIVVRDRNRFHHFKNG 479
Query: 598 TCSCRDYW 605
CSCRD+W
Sbjct: 480 LCSCRDFW 487
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 155/298 (52%), Gaps = 8/298 (2%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVAT--CALSHWGSMDYACSIFRQI 91
+LK C NL K VH V+K+GF + LV C G +++A +F ++
Sbjct: 16 VLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIEFARKVFDEM 75
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + ++ +I G+V+ +A+ L+ EM +GV PD T ++ AC L AL+ G
Sbjct: 76 YKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGK 135
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+ +V K + ++ + N+LI+M+ KC V+ A+ +F+ M ++++ SW+++I A +G
Sbjct: 136 WVESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHG 195
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + +F EM P++ + + +LSAC+H G +D GK S+ ++ S + I
Sbjct: 196 RGVEAVAVFEEMVRSGV-TPDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEH 254
Query: 272 TS-LIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++DM + G +++ L + M D + + +I+ HG+ K I +++R
Sbjct: 255 YGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGEKITRQLIR 312
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/573 (41%), Positives = 355/573 (61%), Gaps = 18/573 (3%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ L +L+ C N+EE +++H +LK G + AS L+A CA + GS+ YA ++F +I
Sbjct: 20 QTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIF 79
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P F +NT+IRG+ E EEAL LY+ M V + +TFP L KAC+ + AL+E Q
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQ 139
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH H+ K+GF +++ NSL+N+Y K ++ A +F Q+DQ+
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRD---------------- 183
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E L LF M + + LVS L AC LG LD GK H + ++ ++ I+
Sbjct: 184 -TEALNLFHRMQTAGI-KLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGC 241
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY KCG LE+ + +FR M +K ++ MISG A+HG+G+EAL F +M G+EP
Sbjct: 242 VLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEP 301
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + + G+L+ACSHAGLV+E L F+ M+ + P+++HYGC+VDL+GRAG+L EA EL
Sbjct: 302 NQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL 361
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I++MP++ N +W +LL+A +H NLE+G+ K L Q++ H Y+ L++++A A W
Sbjct: 362 IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEW 421
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
A++R +M +G+++ PG S++ V ++F++ D SHP I M+ Q+ +L+ E
Sbjct: 422 NQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREE 481
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P + +L D+++ EK + HS+KLA+ F LI G IRI +NLR+C DCHT
Sbjct: 482 GYKPKLGDLLLDLEDKEKETAIHHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVI 541
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS +Y REI++RDR RFH FKDG C+C DYW
Sbjct: 542 KLISKVYAREILMRDRTRFHLFKDGNCTCGDYW 574
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 373/640 (58%), Gaps = 63/640 (9%)
Query: 28 RLKEQECLTIL--KTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+L ++ L + K+ +L+ ++H VL+ G F + + + L+ A H+ + D+A
Sbjct: 28 KLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFAL 87
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F I P F +N +I+G ++ + +A++ Y M P+ FT+P LFKAC+ Q
Sbjct: 88 KVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQ 146
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQ------------------------------NSLINM 175
A++EG QIHGHV K G D+ ++ N++I+
Sbjct: 147 AVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDG 206
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCW---- 229
Y KC +E A +F QM K++ SW+ +I A G + KLF EM+ +E W
Sbjct: 207 YLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMV 266
Query: 230 ------------------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
RP IL SVL+AC+++GA+D G+ H L RN
Sbjct: 267 DGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIK 326
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
L+ ++ T+L+DMY KCG L+ G +F M ++ T++ MI GLA+HG+ ++AL +FS++
Sbjct: 327 LDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKL 386
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
++P+ + VGVL+AC+HAG V++GL F M+ Y + P ++HYGC+VDL+GR+G+
Sbjct: 387 QEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGL 446
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
EA +LI SMP++ N VW +LL A ++H N ++ E K L ++ + YVLLSN+
Sbjct: 447 FSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNI 506
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA+ R+ DV+KIR M +G+ PG S+V++ V++F D SHP IY + +
Sbjct: 507 YAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKII 566
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+ +L+ G+SPD SQVL D+DE+EK + HS+KLAIAF LI+ G I I +NLR+C
Sbjct: 567 KERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVC 626
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+DCH+ TKLIS I++REIIVRDR R+H FK+GTCSC+D+W
Sbjct: 627 DDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/613 (40%), Positives = 364/613 (59%), Gaps = 43/613 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++ +TC +E +++HA LK F +PF +S L+A + + YA SIF +I
Sbjct: 20 LSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR 79
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+NT+I+ +V+ + + L++E+ + PDNFT P + K CA+L ++EG QIH
Sbjct: 80 SLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIH 138
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA-----------SWSAI 203
G K+GF D+FVQ SL+NMY KC +++ A +F M K V SW+A+
Sbjct: 139 GLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAM 198
Query: 204 IAAHASNGLWSECLKLFGEMN--NEKCW----------------------------RPEE 233
I + +G + L+LF +M + W RP
Sbjct: 199 INGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 258
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+ LVSVLSA + L L G+ H + +N L+ I+ TSLI+MY KCGC+E L +FR
Sbjct: 259 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA 318
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ K ++ +I GL +HG AL++F EM + GL+P+ ++++GVL+AC+HAGLV++G
Sbjct: 319 IQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDG 378
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
FD M EY+I PT++HYGC+VD++ RAG L EA I++MPI N V+W SLL S+
Sbjct: 379 RQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSR 438
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
H ++IGE AA+ + ++ Y+LLSNMYA + W V+ +R M +G + PG
Sbjct: 439 NHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGC 498
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD-EDEKRE 532
S VE +++F+ D SHP IY + +M+ +LK G+ PD +QVL ++ E EK
Sbjct: 499 SSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEA 558
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L+ HS++LAIAF LI++ G PIRI +NLR+CNDCH+ TKL+S IY REIIVRD RFH
Sbjct: 559 ELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFH 618
Query: 593 RFKDGTCSCRDYW 605
FK+G+CSC DYW
Sbjct: 619 HFKNGSCSCMDYW 631
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/591 (39%), Positives = 363/591 (61%), Gaps = 5/591 (0%)
Query: 19 PPKGP--ELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS 76
PP P N L++L C +L E K++ A +K + + + C+L+
Sbjct: 6 PPVTPMCPPNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLN 65
Query: 77 -HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
SM +A +F QI +P FNT+ RG+ + A L+ ++ G+ PD++TFP
Sbjct: 66 PTTTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFP 125
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+L KACA +AL+EG Q+H K+G +++V +LINMY C +++ A +F ++ +
Sbjct: 126 SLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEP 185
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V +++A+I +A +E L LF E+ +P + ++SVLS+C LGALDLGK
Sbjct: 186 CVVTYNAMITGYARGSRPNEALSLFRELQARN-LKPTDVTMLSVLSSCALLGALDLGKWM 244
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + +N V V+T+LIDMY KCG L+ +C+F MA + +S MI A+HG G
Sbjct: 245 HEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHG 304
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+A+S+F EM + G EPD++ ++G+L ACSH GLV EG F M+ +Y ++P ++HYGC
Sbjct: 305 LKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGC 364
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+GRAG L EA E I +PI+ ++WR+LLSA H N+E+G+ + +F+++ H
Sbjct: 365 MVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSH 424
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
DY++LSN+ ARA RW DV +R M +G+ + PG S VEV V++F S D H
Sbjct: 425 GGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVS 484
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
+++ + ++ +LK GY P+ S V D++++EK L+ HS+KLAI F L++ G+
Sbjct: 485 TKLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGT 544
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH+ KLIS+I++R+II+RD +RFH FKDG CSC DYW
Sbjct: 545 TIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/561 (41%), Positives = 346/561 (61%), Gaps = 7/561 (1%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALSH--WGSMDYACSIFRQIDEPGAFDFNTLIR 104
KK HA + +G ++ S ++ A+ + + +D A +F I P +F +N +IR
Sbjct: 736 LKKTHAKIFAYGLQYD----SRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 791
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
GF + F +L LY++M E+G++PD F FP K+CA L L+ G IH H+ G
Sbjct: 792 GFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSN 851
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
DLFV +L++MY KC +E A +F +M + + SW+++I+ +A NG SE L F M
Sbjct: 852 DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMR 911
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ P ++SVL AC +LGAL G+ H +I+ +++V T+++DMY KCG L
Sbjct: 912 SSGVI-PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 970
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ CLF A K + +S MI+ +HG G++A+ +F +M++ G+ P V + VLSAC
Sbjct: 971 DLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 1030
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
SH+GL+ EG + F M E+ I + +Y C+VDL+GRAG L EA++LI++MP++ + +
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 1090
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W SLL A ++H+NL++ E A +LF ++ H +VLLSN+YA RW +V K+R MA
Sbjct: 1091 WGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMAR 1150
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+G N+ GFSLVE +V+KF DRSHP W+ +Y + ++ +K GY P VL D
Sbjct: 1151 RGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHD 1210
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
++E+ K L HS++LAIAF LI+ S G+ +RI +NLR+C DCH KLIS I R I+
Sbjct: 1211 IEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVIL 1270
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRD RFHRF+DG CSC DYW
Sbjct: 1271 VRDMHRFHRFEDGVCSCGDYW 1291
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 295/495 (59%), Gaps = 7/495 (1%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++++ C L K VH V++ F + ++L+ A + G A ++F ++
Sbjct: 210 VSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKT--GCEKIAANLFSKM 267
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E ++T+I + EAL L++EM E+ EP++ T + +ACA + L+EG
Sbjct: 268 PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 327
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH GFE D V +LI+MY KC + A +F+++ +K V SW A+++ +A NG
Sbjct: 328 KIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNG 387
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ + + +F M ++ +P+ +V +L+A + LG C HG ++R+ NV V
Sbjct: 388 MAYKSMGVFRNMLSDGI-QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVG 446
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-L 330
SLI++Y KCG L + LF+ M + + +S MI+ +HG+G EAL IF +M++ +
Sbjct: 447 ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTV 506
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P++V ++ +LSACSHAGLV EGL FDRM +Y++ P +H+G +VDL+GR G LG+A+
Sbjct: 507 RPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAM 566
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
++I MPI VW +LL A ++HHN+E+GE AAKNLF ++ H Y+LLSN+YA
Sbjct: 567 DIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDG 626
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W +VA++RT + +GL + G S+VEV V+ F++ DR HP IYE++ ++E Q+
Sbjct: 627 KWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQMG 686
Query: 511 FEGYSPDISQVLRDV 525
E Y PD+ +L D
Sbjct: 687 KEVYIPDLDFLLHDT 701
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 197/390 (50%), Gaps = 22/390 (5%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIF 88
Q + + + C N ++H+ V K G + F A+ +L A CA S+ A +F
Sbjct: 5 QVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCA-----SLQAARKVF 59
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQAL 147
+ P +N+ +R + +E ++EE L L++ M G PDNFT P KACA L+ L
Sbjct: 60 DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119
Query: 148 KEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G IHG K D+FV ++L+ +Y KC ++ A +F++ + W++++
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTG 179
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ N E L LF +M C + LVSV+SAC L + G C HG +IR
Sbjct: 180 YQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDG 239
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ + SL+++Y K GC + LF M +K +++S MI+ A + EAL++F EM+
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 299
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
+ EP+ V V L AC+ + + EG + + +L++ + ++D+
Sbjct: 300 EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTA------LIDMYM 353
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ EA++L Q +P +++ V W +LLS
Sbjct: 354 KCSCPDEAVDLFQRLP-KKDVVSWVALLSG 382
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/576 (40%), Positives = 350/576 (60%), Gaps = 16/576 (2%)
Query: 38 LKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACS--IFR 89
LK+C L+ + + A+ +K G + F S+L+ A+C D A + +F
Sbjct: 126 LKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASC-------RDVAAAQLLFD 178
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++E G +N +I ++K + E + ++ M E GV D T ++ AC ++ K
Sbjct: 179 AVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKL 238
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G + +V + G + + +LI+MY KC ++ A +F M + V +WSA+I+ +
Sbjct: 239 GKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQ 298
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
E L LF EM + P + +VSVLSAC LGAL+ GK H + R +L +I
Sbjct: 299 ADQCREALALFSEMQLAEV-EPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTII 357
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ T+L+D Y KCGC++ + F M K T++ +I G+A +G+G+EAL +FS M +
Sbjct: 358 LGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKAS 417
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+EP DV ++GVL ACSH+ LV EG FD M +Y I P +HYGCVVDL+GRAG++ EA
Sbjct: 418 IEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEA 477
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ I++MPI+ N V+WR+LLS+ VH N+EIGE A K + +N H DY+LLSN+YA
Sbjct: 478 YQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASV 537
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W + A IR EM +G+ ++PG SL+E+ V +F ++D HP IY+ + +M ++
Sbjct: 538 GQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRI 597
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY P+ + V +VDE EK + HS+KLAIAF L+ L G+ IR+++NLR+C DCH
Sbjct: 598 KMAGYIPNTADVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCH 657
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ TKLIS +Y REI+VRDR RFH FKDGTCSC DYW
Sbjct: 658 SATKLISKVYNREIVVRDRNRFHHFKDGTCSCNDYW 693
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 190/372 (51%), Gaps = 18/372 (4%)
Query: 47 FKKVHAHVLKWG-FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD--FNTLI 103
++HA ++K G +P C +L+ A S + YA S+FR P +N L+
Sbjct: 32 LPQLHAALIKSGELTGSPKCFHSLLEAAAASP-TLLPYAVSLFRLGPRPPLSTPCYNVLM 90
Query: 104 RGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
R + E+AL L+ EM + V PD T K+C+++ L G I + K G
Sbjct: 91 RALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGL 150
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
D FV +SLI+MY C V A +F +++ V W+AII A+ NG W E +++F
Sbjct: 151 MADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKG 210
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGK-----CTHGSLIRNISALNVIVETSLIDM 277
M E +E LVSV++AC +G LGK L+RN + + T+LIDM
Sbjct: 211 M-LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM-----TALIDM 264
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L K LF M + + +S MISG Q +EAL++FSEM +EP+DV
Sbjct: 265 YAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTM 324
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
V VLSAC+ G + G ++ + R+ T+ +VD + G + +A+E +SMP
Sbjct: 325 VSVLSACAVLGALETGKWVHSYIRRK-RLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383
Query: 398 IQQNDVVWRSLL 409
+ +N W +L+
Sbjct: 384 V-KNSWTWTALI 394
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/574 (40%), Positives = 355/574 (61%), Gaps = 4/574 (0%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ C+ +L C+N+ ++VHAHV+ G + A+ L+ T A ++D A S+F +
Sbjct: 4 ESCIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYA--QHKAIDDAYSLFDGL 61
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ ++ ++ GF K + + E+ GV PDN+T P + + C L+ G
Sbjct: 62 TMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGR 121
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH V K G D FV SL++MY KC VE A +F++M K + +W+ +I A+A
Sbjct: 122 VIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN 181
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ E L LF M E P++ +V+V++AC LGA+ + + ++RN +L+VI+
Sbjct: 182 AY-ESLVLFDRMREEGV-VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG 239
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T++IDMY KCG +E +F M +K +++S MI+ HG+GK+A+ +F ML +
Sbjct: 240 TAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL 299
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ V +V +L ACSHAGL+ EGL F+ M E+ + P V+HY C+VDL+GRAG L EAL
Sbjct: 300 PNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALR 359
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI++M +++++ +W +LL A ++H +E+ E AA +L ++ +P YVLLSN+YA+A +
Sbjct: 360 LIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGK 419
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VAK R M + L + PG++ +EV K Y+F DRSHP IYEM+ + +L+
Sbjct: 420 WEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEM 479
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD VL+DV+E+ K+E L HS+KLAIAF LI + +G PIRI++NLR+C DCHT+
Sbjct: 480 AGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTF 539
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+K++S I R IIVRD RFH F DGTCSC DYW
Sbjct: 540 SKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/609 (39%), Positives = 360/609 (59%), Gaps = 41/609 (6%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+ + + +L+ K VHA +L+ G + + + ++ ++G+ +Y+ IF Q EP
Sbjct: 14 IRLFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSF--NFGNTNYSHRIFHQTKEP 71
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
F FNT+I G V F+E++ +Y+ M + G+ PD+FTFP L KACA+L K G+++H
Sbjct: 72 NIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLH 131
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH------- 207
G V K G E D FV SL+++YGKC ++ A +F + +K+VA+W+AII+ +
Sbjct: 132 GLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCR 191
Query: 208 -------------------------------ASNGLWSECLKLFGEMNNEKCWRPEESIL 236
ASNGL E L LF +M NE +RP+ +
Sbjct: 192 EAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEG-FRPDCYAM 250
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
V VL AC LGAL+LG + RN N ++ T+LIDMY KCG ++ +FR M
Sbjct: 251 VGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRK 310
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K + ++ ISGLAM G K A +F +M + G+EPD +VG+L AC+HAGLV+EG
Sbjct: 311 KDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQY 370
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F+ M+ + + P ++HYGC+VDL+GRAG L EA +L++SMP++ N +VW +LL ++H
Sbjct: 371 FNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHR 430
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
+ ++ E K L + + +YVLLSN+Y+ + +W D AKIR+ M+ +G+ + PG+S +
Sbjct: 431 DTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWI 490
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
EV V++F+ D SHP + IY + ++ LK GY P VL D++E+EK +
Sbjct: 491 EVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGC 550
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLAIAF LI + IR+ +NLR+C DCH K IS REIIVRD RFH F D
Sbjct: 551 HSEKLAIAFGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFND 610
Query: 597 GTCSCRDYW 605
G+CSC+DYW
Sbjct: 611 GSCSCKDYW 619
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/573 (42%), Positives = 354/573 (61%), Gaps = 36/573 (6%)
Query: 68 NLVATCA----LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
N+VA+ + L G + A +F ++DE ++ LI G+ + +EEAL ++ EM
Sbjct: 237 NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN 296
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG------ 177
G+ D ++ ACA L +K G IHG V ++G E + +QN+LI+MY
Sbjct: 297 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIM 356
Query: 178 -------------------------KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
KC VE A A+F M +K + SWSA+I+ +A +
Sbjct: 357 DAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDC 416
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+SE L LF EM + RP+E+ILVSV+SACTHL ALD GK H + +N +NVI+ T
Sbjct: 417 FSETLALFHEMQLGQI-RPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGT 475
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY+KCGC+E L +F M +K +++ +I GLA++G + +L +FSEM G+ P
Sbjct: 476 TLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIP 535
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+++ ++GVL AC H GLV+EG F M ++ I P V+HYGC+VDL+GRAG+L EA +L
Sbjct: 536 NEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKL 595
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+SMP+ + W +LL A K H + E+GE + L ++ H +VLLSN++A W
Sbjct: 596 IESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDW 655
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DV ++R M +G+ ++PG SL+E V++F++ D++HP + + M+++M +LK E
Sbjct: 656 EDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKME 715
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+PD ++V D+DE+EK L HS+KLAIAF L+ +S +PIRI +NLR+CNDCHT
Sbjct: 716 GYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAA 775
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS Y REI+VRDR RFH FK+G CSC DYW
Sbjct: 776 KLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 209/446 (46%), Gaps = 98/446 (21%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
+++ + L +L T +P P + L + E T L C NL++F ++ + ++ GF
Sbjct: 15 LSKLNQLSSALKSTFNHKPTFKPTITLSILE----THLHNCHNLKQFNRILSQMILTGFI 70
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
+ F AS L+ S + +DY+ IF +I+ F +NT++R +++ E+AL LY
Sbjct: 71 SDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYK 130
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M + V PDN+T+P + +ACA G +IH HV KVGF+ D++VQN+LINMY C
Sbjct: 131 LMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCG 190
Query: 181 K-------------------------------VEFASAIFKQM----------------- 192
VE A IF QM
Sbjct: 191 NMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGK 250
Query: 193 --------------DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
D+K + SWSA+I+ + NG++ E L +F EM N R +E ++VS
Sbjct: 251 MGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEM-NANGMRLDEVVVVS 309
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY-------------------- 278
VLSAC HL + GK HG +IR V ++ +LI MY
Sbjct: 310 VLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLD 369
Query: 279 -----------VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+KCG +EK LF +M +K +++S +ISG A H E L++F EM
Sbjct: 370 QISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQL 429
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEG 353
+ PD+ + V V+SAC+H +++G
Sbjct: 430 GQIRPDETILVSVISACTHLAALDQG 455
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/603 (40%), Positives = 362/603 (60%), Gaps = 13/603 (2%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L++ P P P R EQ CL +L + A +LK G N + L A
Sbjct: 4 LVSSPSAPRLSPSAA-RAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFA 62
Query: 72 TCALSHWGSMDYACSIFRQIDEP-GAFDFNTLIRGF----VKEVEFEEALFLYNEMFERG 126
A + +D + + P AF NTLIR + + A F + M
Sbjct: 63 ASASAAPALLDPLVAALLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAF-FPLMLRGA 121
Query: 127 VEPDNFTFPALFKACAKLQALKE-GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF- 184
V P+ FTFP L KACA L + G+Q H K GF D +V N+LI+MY C F
Sbjct: 122 VVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMY-SCFGGGFL 180
Query: 185 --ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
A +F +M ++S +WSA+I + GL S+ ++LF EM + +E ++ VL+A
Sbjct: 181 GDARNVFDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGV-QADEVTVIGVLAA 239
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
T LGAL+L + + R +V + +LID KCG ++ + +F M + +++
Sbjct: 240 ATDLGALELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSW 299
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I LAM G+GKEA+ +F EM G+ PDDV ++GVL+ACSHAG+V+EG FD MK+
Sbjct: 300 TSVIDALAMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKV 359
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
EY I P ++HYGC+VD+ GRAGM+ A+E +++MPIQ N V+WRSL+SA + H LE+GE
Sbjct: 360 EYGIEPKIEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGE 419
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
++L H ++Y++LSN++A QRW + ++IR EM+ +G+ + PG S+VE+ +V
Sbjct: 420 SITRSLLHEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEV 479
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F++ D SHP + +IY M+ +M +L+ G+ S+VL D+DE++K L+ HS+KLA
Sbjct: 480 HEFIAGDESHPQYKDIYRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLA 539
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAFAL+ G+ +R+ +NLR+C+DCH K IS +Y REI+VRDR RFHRFKDG+CSC+
Sbjct: 540 IAFALLRTPPGTQVRVVKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCK 599
Query: 603 DYW 605
D+W
Sbjct: 600 DFW 602
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/574 (43%), Positives = 346/574 (60%), Gaps = 10/574 (1%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN--LVATCALSHWGS-MDYACSIFRQID 92
+I++ C L K+V AH+L G F S L+ CALS + + YA I R I
Sbjct: 6 SIIQKCTTLSHIKQVQAHLLTTGQFNLRISPSRTRLLEHCALSPSPAYLPYAAHIHRHIP 65
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P DFN L+RG + AL + + PD TF A A+ AL E Q
Sbjct: 66 HPSTNDFNALLRGLARGPHPTHALTFLSTILH----PDALTFSFSLIASARALALSETSQ 121
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH H+ + G D+ + +LI+ Y KC ++ A +F ++ + VA+W+A+IA A
Sbjct: 122 IHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNALIAGLAQGSK 181
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
SE L LF M E E S+L L+AC+ LGAL G+ H + + +NV V
Sbjct: 182 SSEALALFNRMRAEGEKINEISVL-GALAACSQLGALRAGEGVHACVRKMDLDINVQVCN 240
Query: 273 SLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++IDMY KCG +KG +F M K +T++ MI AMHG G AL +F EM + +E
Sbjct: 241 AVIDMYAKCGFADKGFRVFSTMTCGKSVVTWNTMIMAFAMHGDGCRALELFEEMGKTQVE 300
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D V Y+ VL AC+HAGLV EG+ FD M + + V+HYG VVDL+GRAG LGEA
Sbjct: 301 MDSVTYLAVLCACNHAGLVEEGVRLFDEM-VGRGVNRNVKHYGSVVDLLGRAGRLGEAYR 359
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I SMPI + V+W+SLL A K + N+E+ E+A++ L ++ S+ D+VLLSN+YA +R
Sbjct: 360 IINSMPIVPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARER 419
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV ++R M S+ + + PGFS +EV ++KFV+ D+SHP W IY + ++ +++K
Sbjct: 420 WEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIRFRIKA 479
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY + S VL D+ E++K L HS+KLA+AF LI S+G+PIR+ +NLR+C DCH
Sbjct: 480 FGYVAETSLVLHDIGEEDKENALCHHSEKLAVAFGLISTSEGTPIRVNKNLRICGDCHVV 539
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS IY++EIIVRDR RFHRFKDG+CSCRDYW
Sbjct: 540 IKLISKIYDQEIIVRDRARFHRFKDGSCSCRDYW 573
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 370/638 (57%), Gaps = 58/638 (9%)
Query: 23 PELNLRLKEQECLTILK---TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P L Q L + K +CK + K++HA +K G +P A+ ++ CA S
Sbjct: 8 PNRTLNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSS-R 66
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE----EALFLYNEMFERG-VEPDNFTF 134
+DYA ++FRQ+ EP F +NT++R + E E EAL L++ M G V+P+ FTF
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILR-ILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTF 125
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY------------------ 176
P++ KACA+ L+EG QIHG + K GF D FV ++L+ MY
Sbjct: 126 PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVV 185
Query: 177 ---GKCE--------------------------KVEFASAIFKQMDQKSVASWSAIIAAH 207
G C+ ++ A +F +M +SV SW+ +I+ +
Sbjct: 186 DFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGY 245
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A NG + E + LF EM + P LVSVL A +GAL+LGK H +N ++
Sbjct: 246 AQNGHFIEAINLFQEMQSSNI-DPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEID 304
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++ ++L+DMY KCG ++K L +F + + +T+S +I AMHG+ ++A+ F M +
Sbjct: 305 DVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK 364
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G+ P+DV Y+G+LSACSHAGLV EG F M + P ++HYGC+VDL+GRAG L
Sbjct: 365 AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLE 424
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA ELI++MPI+ +DV+W++LL A K+H NL++GE A+ L ++ H YV LSN+YA
Sbjct: 425 EAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYA 484
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
W VA++R +M + + PG S +E+ +++F+ +D SH I M+ +M
Sbjct: 485 SLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSM 544
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
+L+ GY P+ +V + DE E+ L+ HS+K+A+AF LI + P++I +NLR+C D
Sbjct: 545 KLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICED 604
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH KLIS+IY+R+IIVRDRKRFH+F+ G+CSC DYW
Sbjct: 605 CHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/593 (39%), Positives = 357/593 (60%), Gaps = 34/593 (5%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
LE +++H HVLK G +N F + LV L G +D A +F + +N +I
Sbjct: 134 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC--GQLDTARGVFDVCPKADVITWNMII 191
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ K +FEE+ L+ M ++ V P T + AC+KL+ L+ G ++H +V E
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 251
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG------------ 211
+L ++N++I+MY C +++ A IF+ M+ + + SW+ I++ + G
Sbjct: 252 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 311
Query: 212 ------LWS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
W+ E L+LF M +P+E +VSVL+AC HLGAL+LG
Sbjct: 312 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV-KPDEFTMVSVLTACAHLGALELG 370
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ + RN ++ V +LIDMY KCG ++K +FR M+ + + T++ MI GLA++
Sbjct: 371 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 430
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G G++AL +FS ML+ + PD++ Y+GVLSAC+H GLV++G F RM ++ I P + H
Sbjct: 431 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 490
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQIN 432
YGC+VDL+ RAG L EA E+I++MPI+ N +VW +LL+ +V+ ++ E+ K + ++
Sbjct: 491 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 550
Query: 433 SHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSH 492
+ + YVLL N+YA +RW D+ ++R M KG+ ++PG SL+E+ +V++FV+ DRSH
Sbjct: 551 PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSH 610
Query: 493 PAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ 552
P NI + +M LK GYSPDIS+V D+ E++K + HS+KLAIAF LI+
Sbjct: 611 PQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPP 670
Query: 553 GSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G IRI +NLRMC DCH KL+S +Y RE+IVRDR RFH FK G CSC+DYW
Sbjct: 671 GVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 723
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 220/433 (50%), Gaps = 54/433 (12%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P +++L+TC+++++ ++VH +K G NP + ++ C +
Sbjct: 16 PPTHP----------LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEY 65
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE-ALFLYNEMFERGVEPDNFTFPAL 137
G YA +F +I EP F +NT+IRG+ + ++F + + LY EM RGV+PD +TFP L
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSR-LDFPQLGVSLYLEMLRRGVKPDRYTFPFL 124
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
FK + AL+ G Q+HGHV K G + ++FV +L+ MY C +++ A +F + V
Sbjct: 125 FKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADV 184
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
+W+ II+A+ G + E +LF M +++ P LV VLSAC+ L L GK H
Sbjct: 185 ITWNMIISAYNKVGKFEESRRLFLVMEDKQVL-PTTVTLVLVLSACSKLKDLRTGKKVH- 242
Query: 258 SLIRNISA-LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ-- 314
S ++N N+++E ++IDMY CG ++ L +FR M ++ ++++ ++SG G+
Sbjct: 243 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 302
Query: 315 -----------------------------GKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
KEAL +F M ++PD+ V VL+AC+
Sbjct: 303 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 362
Query: 346 HAGLVNEG---LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
H G + G DR K++ + ++D+ + G + +A + + M Q++
Sbjct: 363 HLGALELGEWIRTYIDRNKIKNDLFVR----NALIDMYFKCGDVDKAESIFREMS-QRDK 417
Query: 403 VVWRSLLSASKVH 415
W +++ V+
Sbjct: 418 FTWTAMIVGLAVN 430
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 350/571 (61%), Gaps = 3/571 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
++ L C+N+ + K+VHA V G + A+ L+ CA + A +F +++E
Sbjct: 7 ISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHK--DLVTAHLLFNKMEER 64
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++ +I GFVK ++E + E+ G +PDNF+ P + KAC L G IH
Sbjct: 65 DPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V K G D FV ++L++MY KC ++ A +F +M +K + + + +IA +A G +
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPN 184
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E LF +M + + P++ +V++++AC LGA++ + H + +L+V + T++
Sbjct: 185 ESWVLFDQMRRDG-FVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAM 243
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG ++ +F M K +++S MI HGQG+EAL +F ML G+ P+
Sbjct: 244 IDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNR 303
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ ++ +L ACSHAGLV++GL F M + Y + P V+HY C+VDL+GRAG L +AL LI+
Sbjct: 304 ITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIE 363
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
+M +++++ +W + L A ++H +++ E AAK L + + +P Y+LLSN+YA A RW D
Sbjct: 364 NMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKD 423
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
VAKIR MA + L + PG++ +EV +Y+F + D SH + IYEM+ + +L+ GY
Sbjct: 424 VAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGY 483
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD + VL DVDE+ K L HS+KLAIAF LI G+PIRI +NLR+C DCH++ KL
Sbjct: 484 VPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKL 543
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S I +R+IIVRD RFH FK+G CSC DYW
Sbjct: 544 VSAITQRDIIVRDANRFHHFKEGICSCGDYW 574
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/601 (40%), Positives = 358/601 (59%), Gaps = 33/601 (5%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSH---------------- 77
+LK+C L E K++HAHVLK GF + F ++L+ A S
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194
Query: 78 -------------WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
WG MD A +F ++ +N +I G+ + +EAL L+ +M +
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK 254
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V P+ T ++ ACA+ AL G + + G +L + N+LI+MY KC ++
Sbjct: 255 ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQT 314
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F M ++ V SW+ +I + + E L LF EM P E +S+L +C
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGV-EPTEITFLSILPSCA 373
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
HLGA+DLGK H + +N ++++ + TSLID+Y KCG + +F M K +++
Sbjct: 374 HLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNA 433
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MI GLAMHGQ +A +FS+M +G+EP+++ +VG+LSAC HAGLV+ G F M +Y
Sbjct: 434 MICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDY 493
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA 424
+I P QHYGC++DL+GRAG+ EA L+Q+M ++ + +W SLL A + H +E+GE+
Sbjct: 494 KISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELV 553
Query: 425 AKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYK 484
A+ LF++ +P YVLLSN+YA A +W DVA+IRT + +G+ + PG + +EV V++
Sbjct: 554 AERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHE 613
Query: 485 FVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIA 544
F+ D+ HP ++IY M+ +++ QLK G+ D S+VL D+DE+ K L HS+KLAIA
Sbjct: 614 FLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIA 673
Query: 545 FALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
F LI G+PIRI +NLR+C +CH+ TKLIS I+ REII RDR RFH FKDG+CSC DY
Sbjct: 674 FGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDY 733
Query: 605 W 605
W
Sbjct: 734 W 734
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/428 (33%), Positives = 216/428 (50%), Gaps = 35/428 (8%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
P P + L+E L +L C+++ FK++HAH++K G F S L+ A+S
Sbjct: 18 PSSDPPYRV-LQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRS 76
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + YA S+F I+EP F +N++IRG + AL + M GVEP+++TFP L
Sbjct: 77 GDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ------- 191
K+CAKL + EG QIH HV K+GF D+F+ SLINMY + ++ A +F Q
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAI 196
Query: 192 ------------------------MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
M K V SW+A+IA +A G E L LF +M
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN 256
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P ES +VSVLSAC ALDLG + N+ + +LIDMY KCG L+
Sbjct: 257 V-PPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTA 315
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
LF M ++ ++++VMI G KEAL++F EML G+EP ++ ++ +L +C+H
Sbjct: 316 RELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHL 375
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G ++ G + + V T ++DL + G + A ++ M I ++ W +
Sbjct: 376 GAIDLGKWIHAYINKNFNSVSTSLST-SLIDLYAKCGNIVAARQVFDGMKI-KSLASWNA 433
Query: 408 LLSASKVH 415
++ +H
Sbjct: 434 MICGLAMH 441
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/638 (38%), Positives = 370/638 (57%), Gaps = 58/638 (9%)
Query: 23 PELNLRLKEQECLTILK---TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P Q L + K +CK + K++HA +K G +P A+ ++ CA S
Sbjct: 8 PNRTFNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSS-R 66
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE----EALFLYNEMFERG-VEPDNFTF 134
+DYA ++FRQ+ EP F +NT++R + E E EAL L++ M G V+P+ FTF
Sbjct: 67 DIDYARAVFRQMPEPNCFCWNTILR-VLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTF 125
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY------------------ 176
P++ KACA+ L+EG QIHG + K GF D FV ++L+ MY
Sbjct: 126 PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVV 185
Query: 177 ---GKCE--------------------------KVEFASAIFKQMDQKSVASWSAIIAAH 207
G C+ ++ A +F +M Q+SV SW+ +I+ +
Sbjct: 186 DFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGY 245
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A NG + E + LF EM + P LVSVL A +GAL+LGK H +N ++
Sbjct: 246 AQNGHFIEAINLFQEMQSSNI-DPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEID 304
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++ ++L+DMY KCG +++ L +F + + +T+S +I AMHG+ ++A+ F M +
Sbjct: 305 DVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGK 364
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G+ P+DV Y+G+LSACSHAGLV EG F M + P ++HYGC+VDL+GRAG L
Sbjct: 365 AGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLE 424
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA ELI++MPI+ +DV+W++LL A K+H NL++GE A+ L ++ H YV LSN+YA
Sbjct: 425 EAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYA 484
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
W VA++R +M + + PG S +E+ +++F+ +D SH I M+ +M
Sbjct: 485 SLGNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSM 544
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
+L+ GY P+ +V + DE E+ L+ HS+K+A+AF LI + P++I +NLR+C D
Sbjct: 545 KLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICED 604
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH KLIS+IY+R+IIVRDRKRFH+F+ G+CSC DYW
Sbjct: 605 CHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 355/593 (59%), Gaps = 34/593 (5%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
LE +++H HVLK G +N F + LV L G +D A +F + +N +I
Sbjct: 155 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC--GQLDTARGVFDVCPKADVITWNMII 212
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ K +FEE+ L+ M ++ V P T + AC+KL+ L+ G ++H +V E
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVE 272
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG------------ 211
+L ++N++I+MY C +++ A IF+ M+ + + SW+ I++ + G
Sbjct: 273 SNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKM 332
Query: 212 -------------------LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+ E L+LF M +P+E +VSVL+AC HLGAL+LG
Sbjct: 333 PEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV-KPDEFTMVSVLTACAHLGALELG 391
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ + RN ++ V +LIDMY KCG ++K +FR M+ + + T++ MI GLA++
Sbjct: 392 EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVN 451
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G G++AL +FS ML+ + PD++ Y+GVLSAC+H GLV++G F RM ++ I P + H
Sbjct: 452 GHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAH 511
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQIN 432
YGC+VDL+ RAG L EA E+I++MPI+ N +VW +LL+ +V+ ++ E+ K + ++
Sbjct: 512 YGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE 571
Query: 433 SHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSH 492
+ + YVLL N+YA +RW D+ ++R M KG+ + PG SL+E+ +V++FV+ DRSH
Sbjct: 572 PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSH 631
Query: 493 PAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ 552
P NI + +M LK GYSPDIS+V D+ E++K + HS+KLAIAF LI+
Sbjct: 632 PQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPP 691
Query: 553 GSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G IRI +NLRMC DCH KL+S +Y RE+IVRDR RFH FK G CSC+DYW
Sbjct: 692 GVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDYW 744
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 220/433 (50%), Gaps = 54/433 (12%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P +++L+TC+++++ ++VH +K G NP + ++ C +
Sbjct: 37 PPTHP----------LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEY 86
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE-ALFLYNEMFERGVEPDNFTFPAL 137
G YA +F +I EP F +NT+IRG+ + ++F + + LY EM RGV+PD +TFP L
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSR-LDFPQLGVSLYLEMLRRGVKPDRYTFPFL 145
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
FK + AL+ G Q+HGHV K G + ++FV +L+ MY C +++ A +F + V
Sbjct: 146 FKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADV 205
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
+W+ II+A+ G + E +LF M +++ P LV VLSAC+ L L GK H
Sbjct: 206 ITWNMIISAYNKVGKFEESRRLFLVMEDKQVL-PTTVTLVLVLSACSKLKDLRTGKKVH- 263
Query: 258 SLIRNISA-LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ-- 314
S ++N N+++E ++IDMY CG ++ L +FR M ++ ++++ ++SG G+
Sbjct: 264 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 323
Query: 315 -----------------------------GKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
KEAL +F M ++PD+ V VL+AC+
Sbjct: 324 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 383
Query: 346 HAGLVNEG---LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
H G + G DR K++ + ++D+ + G + +A + + M Q++
Sbjct: 384 HLGALELGEWIRTYIDRNKIKNDLFVR----NALIDMYFKCGDVDKAESIFREMS-QRDK 438
Query: 403 VVWRSLLSASKVH 415
W +++ V+
Sbjct: 439 FTWTAMIVGLAVN 451
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/569 (42%), Positives = 352/569 (61%), Gaps = 3/569 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
++K C +L + KK+H VLK GF W+ F A++LV S +G + A +F +
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHM--YSRFGLVGDARKLFDDMPARDR 60
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I G+ + EAL + +EM GV+ D T ++ CA++ + G IH +
Sbjct: 61 GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G E +LFV N+LINMY K + A +F + K V SW+ +I +A NGL SE
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL-IKDVVSWNTLITGYAQNGLASEA 179
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++++ M + P + VS+L A +H+GAL G HG +I+N +V V T LID
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLID 239
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KCG L+ + LF + K + ++ MIS +HG G++AL +F EM E ++PD +
Sbjct: 240 MYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHIT 299
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V +LSACSH+GLV++ CF+ M+ EY I P+++HYGC+VDL GRAG L A I+ M
Sbjct: 300 FVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM 359
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
PIQ + W +LL+A ++H N+E+G+ A++ LF+++S + YVLLSN+YA +W V
Sbjct: 360 PIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVD 419
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
+R+ +GL ++PG+S + + KV F + +++HP + IY + + ++K GY P
Sbjct: 420 DVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVP 479
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
D VL+DV+EDEK L GHS++LAIA+ +I S +PIRI +NLR+C DCHT TK IS
Sbjct: 480 DFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTKFIS 539
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+I EREIIVRD RFH FK GTCSC DYW
Sbjct: 540 IITEREIIVRDSSRFHHFKGGTCSCGDYW 568
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/587 (40%), Positives = 355/587 (60%), Gaps = 12/587 (2%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R EQ CL +L + A +LK G N + L A A + +D +
Sbjct: 19 RAAEQHCLRLLAASSTPTSLLQSVAFLLKSGLHANSLVLTRLFAASASAAPALLDPLVTA 78
Query: 88 FRQIDEP-GAFDFNTLIRGF----VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
+ P AF NTLIR + + A F + M V P+ FTFP L KACA
Sbjct: 79 LLRPSVPLDAFLANTLIRAHATSPIHSLRLRAAAF-FPLMLRGAVVPNKFTFPFLLKACA 137
Query: 143 KLQALKE-GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF---ASAIFKQMDQKSVA 198
L + G+Q H K GF D +V N+LI+MY C F A +F +M ++S
Sbjct: 138 ALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMY-SCFGGGFLGDARNVFDRMPKESAV 196
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+WSA+I + GL S+ + LF EM + +E ++ VL+A T LGAL+L +
Sbjct: 197 TWSAMIGGYVRGGLSSDAVDLFREMQANGV-QADEVTVIGVLAAATDLGALELARWVRRF 255
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ R +V + +LID KCG ++ + +F M + ++++ +I LAM G+GKEA
Sbjct: 256 VEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEA 315
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F EM G+ PDDV ++GVL+ACSHAG+V+EG FD MK+EY I P ++HYGC+VD
Sbjct: 316 VRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVD 375
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
+ GRAGM+ A+E +++MPIQ N V+WRSL+SA + H LE+GE ++L H ++
Sbjct: 376 MFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEAN 435
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y++LSN++A QRW + ++IR EM+ +G+ + PG S+VE+ +V++F++ D SHP + +I
Sbjct: 436 YIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGDESHPQYKDI 495
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y M+ +M +L+ G+ S+VL D+DE++K L+ HS+KLAIAFAL+ G+ +R+
Sbjct: 496 YRMVEEMARELRRVGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFALLRTPPGTQVRV 555
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH K IS +Y REI+VRDR RFHRFKDG+CSC+D+W
Sbjct: 556 VKNLRVCSDCHAAIKCISQVYRREIVVRDRSRFHRFKDGSCSCKDFW 602
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/620 (40%), Positives = 359/620 (57%), Gaps = 45/620 (7%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P++ L++ CK L K+VHA ++ +PF S L + ALS +
Sbjct: 64 PPSNPQI---------LSLFNPCKTLRHLKQVHAQIIT--HHNSPFQLSALASLSALSPF 112
Query: 79 GS-MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+ + YA +IF + P +N+LIR EAL LY+ M + G++PD+ T+P +
Sbjct: 113 PTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFV 172
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY--------------------- 176
KAC + G+ +H HV K GFECD ++ +SLI++Y
Sbjct: 173 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV 232
Query: 177 --------GKCEKVEFASA--IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
G + VE A +F +M + V SW+ +I +A G +E L LF +M
Sbjct: 233 VSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAV 292
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+P E+ +VS+LSAC HLGALD G H + N +N IV T+L+DMY KCG +
Sbjct: 293 GV-KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISL 351
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M K L ++ +I+G+A+HG KEA +F EM G+EP+D+ +V +LSACSH
Sbjct: 352 ATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSH 411
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
AG+V+EG D M Y I P V+HYGCV+DL+ RAG L EA+ELI +MP++ N
Sbjct: 412 AGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALG 471
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LL ++H N E+GE+ K L + H Y+LLSN+YA A++W D K+R M G
Sbjct: 472 ALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNG 531
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDV 525
+++ PG S++E+ V++FV+ D SHP + IYE ++++ +LK GYS D VL D+
Sbjct: 532 ISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDM 591
Query: 526 DEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
+E++K L HS+KLAIA+ L+HL IRI +NLR+C DCH KLIS +Y REIIV
Sbjct: 592 EEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIV 651
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RDR RFH F+DG CSC D+W
Sbjct: 652 RDRNRFHHFEDGECSCLDFW 671
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/609 (40%), Positives = 358/609 (58%), Gaps = 42/609 (6%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
+ CK K++HAH +K G +P A+ L+ LS + YA F QI P F
Sbjct: 22 ISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCF 81
Query: 98 DFNTLIRGFVK-------EVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
+NT+IR V EAL ++ M G VEP+ FTFP + KACAKL ++E
Sbjct: 82 SWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEE 141
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ------------------ 191
G Q+HG V K+G D FV+++L+ +Y C ++ A +F Q
Sbjct: 142 GKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYV 201
Query: 192 --------------MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
M KSV SW+ +I+ A NG + E +++F +M P LV
Sbjct: 202 RMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDV-PPNYVTLV 260
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
SVL A + LGA++LGK H +N ++ ++ ++LIDMY KCG ++K + +F + +K
Sbjct: 261 SVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNK 320
Query: 298 CQ-LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+T+S +I GLAMHG+ ++AL F M + G+ P DVVY+GVLSACSHAGLV EG
Sbjct: 321 KNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSI 380
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
+ M ++P ++HYGC+VDL+GRAG L EA +LI +MP++ +DV+ ++LL A K+H
Sbjct: 381 YYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHG 440
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N+E+GE AK L H YV LSNM+A W V K+R +M + + PG S +
Sbjct: 441 NIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWI 500
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
E+ +++F+ +D SHP + I+ M+ +M +L+ GY P+ +QVL ++DE EK+ L
Sbjct: 501 ELDGVIHEFLVEDDSHPRAEGIHSMLEEMSDRLRSVGYRPNTTQVLLNMDEKEKQSALHY 560
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+K+AIAF LI +P++I +NLR+C DCH+ KL+S IY R+IIVRDRKRFH F++
Sbjct: 561 HSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRFHHFEN 620
Query: 597 GTCSCRDYW 605
G+CSC DYW
Sbjct: 621 GSCSCMDYW 629
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 136/325 (41%), Gaps = 52/325 (16%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM--YGKCEKVEFASAIFKQMDQ 194
LF ++ + + QIH H K G L+ ++++A F Q+
Sbjct: 18 LFPQISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHH 77
Query: 195 KSVASWSAIIAAHAS---------NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+ SW+ II A A N L E L F M + P + VL AC
Sbjct: 78 PNCFSWNTIIRALADSDDDDLFHVNSL--EALLYFSHMLTDGLVEPNKFTFPCVLKACAK 135
Query: 246 LGALDLGKCTHGSLIR-----------NISAL---------------------NVIVETS 273
L ++ GK HG +++ N+ + NV++
Sbjct: 136 LARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNV 195
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
+ID YV+ G L LF M +K ++++VMISG A +G KEA+ +F +M + P+
Sbjct: 196 MIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPN 255
Query: 334 DVVYVGVLSACSHAGLVNEGL---LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
V V VL A S G + G L ++ ++E V ++D+ + G + +A+
Sbjct: 256 YVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLG----SALIDMYSKCGSIDKAV 311
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVH 415
++ + + ++N + W +++ +H
Sbjct: 312 QVFEGIRNKKNPITWSAIIGGLAMH 336
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/584 (39%), Positives = 363/584 (62%), Gaps = 15/584 (2%)
Query: 28 RLKEQECLTILKT--CKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMD 82
+L + L +L T +L K+ HA +L+ G + + A +LV A + + + S +
Sbjct: 50 KLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFE 109
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
+ +F + +P F +N +I+ ++ E +A+ LY EM P+ +T+PA+ KAC+
Sbjct: 110 SSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACS 169
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ EG+Q+H H+ K G D + +S I MY ++ A I + A
Sbjct: 170 DAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDA---- 225
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+ G + E L++F +M EK RP + +L SVLSAC +LGALD G+ H RN
Sbjct: 226 -VCMPDRKGCFMEALEIFHQMQKEKI-RPRKFVLPSVLSACANLGALDQGRWIHTYAKRN 283
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
L+ ++ TSL+DMY KCG ++ +F M++K +++ MI GLAMHG+ ++A+ +F
Sbjct: 284 SIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLF 343
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
S+M + P+++ +VGVL+AC+H GLV +GL F+ M+ EY + P ++HYGC+VDL+GR
Sbjct: 344 SKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGR 400
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG+L EA +++ S+P + VW +LL A + H N+E+GE K L ++ + Y LL
Sbjct: 401 AGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLL 460
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR-KVYKFVSQDRSHPAWDNIYEM 501
SN+YA+A RW +V ++R M +G+ +PG S++++ R +V+KF+ D SHP +IY+M
Sbjct: 461 SNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQM 520
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ +++ +L+ EGY PD SQVL D+DE+EK + HS+KLAI F LI+ S G+ IRI +N
Sbjct: 521 LDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKN 580
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH+ TKLIS +Y REIIVRDR R+H F++G CSC+D+W
Sbjct: 581 LRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 624
>gi|413923545|gb|AFW63477.1| hypothetical protein ZEAMMB73_625657 [Zea mays]
Length = 423
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/395 (54%), Positives = 284/395 (71%), Gaps = 1/395 (0%)
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GLW ECL+ FG M + WRP+ES VS LSAC HLGA D+G+ H +L+RN + LN I+
Sbjct: 30 GLWGECLESFGAMVLDG-WRPDESSTVSALSACAHLGAFDVGRSLHCALLRNTARLNTIM 88
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+TSL+DMY KCG +EK +F M DK TYS M+SGLA+HG G++AL +F M+RE
Sbjct: 89 QTSLVDMYAKCGSIEKAAAVFDAMDDKNAWTYSAMLSGLALHGDGRKALQVFDAMVRERH 148
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD YVGVL+ACS AGL+ +GL CFDRM+LE+ + P Q+YGC+VDLM RAG L +A
Sbjct: 149 APDAATYVGVLNACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYGCMVDLMARAGRLDDAR 208
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
LI SM D WRSLL+A ++H +L++ E A + L ++ + + DYV++++M+ARA+
Sbjct: 209 ALIGSMSTGPTDTAWRSLLNACRIHGDLDLAERALQELRRLGAANAGDYVIVADMHARAK 268
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W A++RTE GL QSPG S VEV ++++FVSQDRSHP +IYEM+HQMEWQL+
Sbjct: 269 DWAAAAQLRTEAVDWGLAQSPGVSAVEVRGELHRFVSQDRSHPRTSDIYEMLHQMEWQLR 328
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
F+GY PD S+V DV E+EKR + HSQKLA+AF L+ ++G+P+RI NLRM +CH
Sbjct: 329 FDGYKPDTSEVALDVGEEEKRRVVAAHSQKLAMAFGLLSTAEGAPVRIVTNLRMSKECHA 388
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
Y+ LIS I+ REI++RDR R HRF+ G CSCRDYW
Sbjct: 389 YSALISEIFGREIVIRDRNRLHRFRRGVCSCRDYW 423
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 3/226 (1%)
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ K + E L + M G PD + + ACA L A G +H + + +
Sbjct: 26 YTKAGLWGECLESFGAMVLDGWRPDESSTVSALSACAHLGAFDVGRSLHCALLRNTARLN 85
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+Q SL++MY KC +E A+A+F MD K+ ++SA+++ A +G + L++F M
Sbjct: 86 TIMQTSLVDMYAKCGSIEKAAAVFDAMDDKNAWTYSAMLSGLALHGDGRKALQVFDAMVR 145
Query: 226 EKCWRPEESILVSVLSACTHLGALDLG-KCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E+ P+ + V VL+AC+ G L+ G +C + + A N ++D+ + G L
Sbjct: 146 ER-HAPDAATYVGVLNACSRAGLLEDGLRCFDRMRLEHNVAPNAQYYGCMVDLMARAGRL 204
Query: 285 EKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ L M + +++ +HG A E+ R G
Sbjct: 205 DDARALIGSMSTGPTDTAWRSLLNACRIHGDLDLAERALQELRRLG 250
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 28 RLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSM 81
R E ++ L C +L F + +H +L+ N ++LV A C GS+
Sbjct: 48 RPDESSTVSALSACAHLGAFDVGRSLHCALLRNTARLNTIMQTSLVDMYAKC-----GSI 102
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
+ A ++F +D+ A+ ++ ++ G + +AL +++ M PD T+ + AC
Sbjct: 103 EKAAAVFDAMDDKNAWTYSAMLSGLALHGDGRKALQVFDAMVRERHAPDAATYVGVLNAC 162
Query: 142 AKLQALKEGMQ 152
++ L++G++
Sbjct: 163 SRAGLLEDGLR 173
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/609 (38%), Positives = 364/609 (59%), Gaps = 43/609 (7%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L +C +LE +VH+H++K GF + F + L+ ++ +G+++ A ++F +
Sbjct: 117 LLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSV--FGNLNLARTLFDESLV 174
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT+I+G+ + + E AL L+ EM G+ PD FTF ALF C+ L G QI
Sbjct: 175 RDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQI 234
Query: 154 HGHVFK--VGFECDLFVQNSLINMYGKCE------------------------------- 180
H V+K + ++ +++++++MY KC
Sbjct: 235 HAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARC 294
Query: 181 -KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
++ A +F M ++ V SW+A+I+ ++ G SE L+LF EM +P+E LV+V
Sbjct: 295 GEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGI-KPDEVTLVAV 353
Query: 240 LSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD-- 296
LSAC LGA DLGK + I N + N I+ +++DMY KCG ++ L +FR +
Sbjct: 354 LSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNM 413
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K ++ MI+GLA HG G+ A+++F E++ GL+PD+V +VGVL AC H+GL+ EG
Sbjct: 414 KTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKL 473
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F+ M Y I P ++HYGC+VDL+GR G L EA +L+Q MP + N V+WR+LLSA + H
Sbjct: 474 FESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG 533
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N++IGEIA + L ++ + H + YVLLSN+ A A +W + ++R M G+ + PG+S +
Sbjct: 534 NVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYI 593
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
E+ +++FV+ D+SHP I M+ M +LK GY P+ +QV+ D+DE+EK +
Sbjct: 594 ELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSY 653
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF L++ S IRI +NLR+C DCH KL+S IY REI VRD RFH F++
Sbjct: 654 HSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRN 713
Query: 597 GTCSCRDYW 605
G+CSC D+W
Sbjct: 714 GSCSCMDFW 722
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 219/433 (50%), Gaps = 41/433 (9%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL-SHWGSMDYACSI 87
L+ L +L++CK+ ++ ++HA + G F S L++ +L +D++ +
Sbjct: 7 LENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLL 66
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-DNFTFPALFKACAKLQA 146
F QID P F +NT+IRG+ + EA+ LY M +G+ P +NFTFP L +CA+L +
Sbjct: 67 FSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSS 126
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L+ G ++H H+ K GFE DLFV+N+LI++Y + A +F + + + S++ +I
Sbjct: 127 LEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKG 186
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+A L LFGEM N P+E V++ S C+ L ++GK H + +N+ ++
Sbjct: 187 YAEVNQPESALCLFGEMQNSGIL-PDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245
Query: 267 --NVIVETSLIDMYVKCG------------------------------CLEKGLC--LFR 292
N++++++++DMY KCG C E + LF
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M ++ ++++ MISG + GQ EAL +F EM G++PD+V V VLSAC+ G +
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ-QNDVVWRSLLSA 411
G + + V+D+ + G + ALE+ + + + V+ S+++
Sbjct: 366 GKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAG 425
Query: 412 SKVHHNLEIGEIA 424
H +GE A
Sbjct: 426 LAQH---GLGETA 435
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/598 (38%), Positives = 364/598 (60%), Gaps = 20/598 (3%)
Query: 21 KGPELNLRLKEQ-------ECLTILKTCKNLEEF---KKVHAHVLKWGF--FWNPFCA-S 67
K EL LR++++ +T+L ++ K +H + ++ GF N A +
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
++ + C GS++ A IF +D+ +N+++ G+V+ E E+A+ ++ +M E G+
Sbjct: 291 DMYSKC-----GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+P T ACA L L+ G +H V ++ D+ V NSLI+MY KC++V+ AS
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASD 405
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF ++ ++ SW+A+I +A NG SE L F EM + +P+ +VSV+ A L
Sbjct: 406 IFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELS 464
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
K HG +IR+ N+ V T+L+DMY KCG + LF M++D+ +T++ MI
Sbjct: 465 VTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMID 524
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
G HG G+ AL +F +M + +EP+D+ Y+ V+SACSH+GLV+EGL F MK +Y +
Sbjct: 525 GYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLE 584
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
P++ HYG +VDL+GRAG + EA + I++MPI V+ ++L A K+H N+E+GE AAK
Sbjct: 585 PSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKK 644
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
LF++N +VLL+N+YA +W VA++R M KGL ++PG S+VE+ +V+ F S
Sbjct: 645 LFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYS 704
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
+HP IY + ++ +++K GY PD + +L DV++D + + L HS+KLAIAF L
Sbjct: 705 GSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGL 763
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ S G+ I + +NLR+C DCH TK IS++ REIIVRD +RFH FK+G CSC DYW
Sbjct: 764 LNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 169/317 (53%), Gaps = 3/317 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ C +++E ++ V+K G + + LV+ S +GS++ A +F ID+
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSL--FSKYGSINEAARVFEPIDDKLD 112
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
++T+++G+ K E AL M V+P + F L K C LK G +IHG
Sbjct: 113 ALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQ 172
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ F ++F ++NMY KC +++ A +F +M ++ + SW+ IIA + NG +
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L+L M +E RP+ LV+VL A +G L +GK HG IR A V + T+L D
Sbjct: 233 LELVLRMQDEG-QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KCG +E +F M K ++++ M+ G +G+ ++A+++F +ML EG++P V
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 337 YVGVLSACSHAGLVNEG 353
+ L AC+ G + G
Sbjct: 352 IMEALHACADLGDLERG 368
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/610 (37%), Positives = 354/610 (58%), Gaps = 18/610 (2%)
Query: 12 LLTQPEEPPKGPELNLRLKEQ-------------ECLTILKTCKNLEEFKKVHAHVLKWG 58
L E P E + RL+ Q + ++++K+C ++HAH+++
Sbjct: 36 FLDSEESPSTASENHRRLQHQTHPLPKSRDESENQLISLIKSCSKKTHLLQIHAHIIRTS 95
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
N F + ++ ALS M Y+ +F QI +P +N +IR + E+ +L
Sbjct: 96 LIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAYSMSHSPEQGFYL 155
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
Y EM RGV P+ + + K+C ++ +L G+QIH + + G + D + +L+++Y
Sbjct: 156 YREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSDNLLLTTLMDLYSC 215
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRPEESILV 237
C+K E A +F ++ Q SW+ +I+ N + L++F M + + P++ +
Sbjct: 216 CDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCL 275
Query: 238 SVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+L AC +LGAL+ G+ H + + ALN+ SLI MY +CG LEK +F+ M
Sbjct: 276 LLLQACANLGALEFGERVHNYIEEHGYDGALNLC--NSLITMYSRCGRLEKAYSIFKRMD 333
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
++ +++S MISG AMHG G+EA+ F +M + G+ PDD GVLSACSH GLV++GL+
Sbjct: 334 ERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLM 393
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
FDRM + I P + HYGC+VDL+GRAG+L +A +LI SM I+ + +WR+LL A ++H
Sbjct: 394 FFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIH 453
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
+ +GE +L ++ + DYVLL N+Y+ W V +R M KG+ SPG S
Sbjct: 454 RHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCST 513
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+E+ KV++FV D HP D IYEM+ ++ QLK GY ++S L ++ +EK RL
Sbjct: 514 IELKGKVHEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLS 573
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF ++ G+ IR+A+NLR+C DCH + K++S Y RE+++RDR RFH F+
Sbjct: 574 YHSEKLAIAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDRTRFHHFR 633
Query: 596 DGTCSCRDYW 605
+G CSC YW
Sbjct: 634 EGQCSCNGYW 643
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 234/595 (39%), Positives = 359/595 (60%), Gaps = 28/595 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK C + K++H +K G + F + L+ S GS+ A +F ++
Sbjct: 114 SVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQM--YSECGSLVSARLLFDKMS 171
Query: 93 EPGAFDFNTLIR----------------------GFVKEVEFEEALFLYNEMFERGVEPD 130
E ++T+IR G+++ + EE L+ M E V P+
Sbjct: 172 ERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPN 231
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
+ T +L +C + A++ G ++H ++ + GF L + +L++MYGKC ++ A AIF
Sbjct: 232 DITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFD 291
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
M K V +W+A+I+A+A +LF +M + RP E +VS+LS C GALD
Sbjct: 292 SMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV-RPNELTMVSLLSLCAVNGALD 350
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
+GK H + + ++VI++T+LIDMY KCG + LF D+ T++VM++G
Sbjct: 351 MGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYG 410
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
MHG G++AL +F+EM G++P+D+ ++G L ACSHAGLV EG F++M ++ +VP V
Sbjct: 411 MHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKV 470
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HYGC+VDL+GRAG+L EA ++I+SMP+ N +W ++L+A K+H N +GE+AA+ L
Sbjct: 471 EHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLA 530
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
+ + VL+SN+YA A RW DVA +R + G+ + PG S +EV V+ F D
Sbjct: 531 LEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDT 590
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
+HP + I EM+ +M +LK GY PD S VL ++DE+EK L HS+KLA+AF LI
Sbjct: 591 AHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKETALNYHSEKLAMAFGLIST 650
Query: 551 SQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ G+PIR+ +NLR+C+DCHT TKL+S IY+R IIVRDR RFH F++G+CSC YW
Sbjct: 651 APGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNRFHHFREGSCSCGGYW 705
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 173/360 (48%), Gaps = 36/360 (10%)
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
AL Y M + +E D+F P++ KAC+++ + G +IHG K G D+FV N+L+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 175 MYGKCEKVEFASAIFKQM----------------------DQKSVASWSAIIAAHASNGL 212
MY +C + A +F +M Q+S+ SW+A+IA +
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E +LF M E + P + ++S++ +C +GA+ LGK H ++RN +++ + T
Sbjct: 213 LEEGERLFVRMIEENVF-PNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALAT 271
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG + +F M +K +T++ MIS A A +F +M G+ P
Sbjct: 272 ALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331
Query: 333 DDVVYVGVLSACSHAGLVNEGL---LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+++ V +LS C+ G ++ G D+ +E ++ ++D+ + G + A
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKT----ALIDMYAKCGDISGA 387
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH--HPSDYVLLSNMYA 447
L S I ++ W +++ +H GE A K ++ + P+D + ++A
Sbjct: 388 QRLF-SEAIDRDICTWNVMMAGYGMH---GYGEKALKLFTEMETLGVKPNDITFIGALHA 443
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/558 (41%), Positives = 343/558 (61%), Gaps = 32/558 (5%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G+++ AC +F ++ + ++ LI + + +EEAL L+ EM G+ D ++
Sbjct: 237 GNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVL 296
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV---------------- 182
AC++L + G +HG V KVG E + +QN+LI+MY CE+V
Sbjct: 297 SACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQI 356
Query: 183 ---------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
E A A+F M K SWSA+I+ +A ++E L LF EM E
Sbjct: 357 SWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG 416
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P+E+ILVSV+SACTHL ALD GK H + +N +N+I+ T+LI+MY+K GC+E
Sbjct: 417 T-KPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA 475
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
L +F+ + +K T++ +I GLAM+G ++L FSEM G+ P+++ +V VL AC H
Sbjct: 476 LEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHM 535
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV+EG F+ M E++I P ++HYGC+VDL+GRAGML EA ELI+SMP+ + W +
Sbjct: 536 GLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGA 595
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A K + + E GE + L +++ H VLLSN+YA W DV ++R M G+
Sbjct: 596 LLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGV 655
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S++E +V++F++ D++HP ++I M+ +M +LK EGY+PD +V D+DE
Sbjct: 656 VKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDE 715
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK L HS+KLAIAF LI + +PIRI +NLR+CNDCHT KLIS + REI+VRD
Sbjct: 716 EEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRD 775
Query: 588 RKRFHRFKDGTCSCRDYW 605
R RFH FK G+CSC DYW
Sbjct: 776 RHRFHHFKQGSCSCMDYW 793
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 203/437 (46%), Gaps = 101/437 (23%)
Query: 13 LTQPEEPPK---GPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL 69
L++P + P P L L + E T L+ C+N+++F ++ + ++ GFF + F AS L
Sbjct: 9 LSKPFKIPTFTLKPTLTLPILE----THLQKCQNIKQFNQILSQMILSGFFKDSFAASRL 64
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
+ + +++ + IF I+ P F NT+++G+++ +A+++Y M E V
Sbjct: 65 LKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAA 124
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
DN+T+P LF++C+ A +G I HV KVGF+ D+++QN+LINMY C + A +F
Sbjct: 125 DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVF 184
Query: 190 KQMDQKSVASWSAIIAAH----------------------ASNGL--------------- 212
+ SW++++A + ASN +
Sbjct: 185 DGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACK 244
Query: 213 ------------WS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
WS E L LF EMN +E +++SVLSAC+ L
Sbjct: 245 LFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIM-VDEVVVLSVLSACSRLL 303
Query: 248 ALDLGKCTHG---------------SLIRNISA----------------LNVIVETSLID 276
+ GK HG +LI S+ L+ I S+I
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
YVKCG +EK LF M DK +++S MISG A + E L +F EM EG +PD+ +
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423
Query: 337 YVGVLSACSHAGLVNEG 353
V V+SAC+H +++G
Sbjct: 424 LVSVISACTHLAALDQG 440
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/556 (42%), Positives = 339/556 (60%), Gaps = 4/556 (0%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH +VL+ GF ++ LV S GS+ A IF +D +N++I G+V+
Sbjct: 153 VHGYVLRAGFESLVNVSTALVDM--YSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQS 210
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+ E A+ ++ +M + GV+P N T ACA L L+ G +H V ++ + D+ V
Sbjct: 211 GDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVM 270
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
NSLI+MY KC++V+ A+ IFK + K++ SW+A+I +A NG +E L F EM +
Sbjct: 271 NSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI- 329
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P+ +VSV+ A L K HG +IR NV V T+L+DMY KCG +
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF MM + +T++ MI G HG GK ++ +F EM + ++P+D+ ++ LSACSH+GL
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V EGL F+ MK +Y I PT+ HYG +VDL+GRAG L +A + IQ MPI+ V+ ++L
Sbjct: 450 VEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAML 509
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
A K+H N+++GE AA +F++N +VLL+N+YA A W VAK+RT M GL +
Sbjct: 510 GACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQK 569
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
+PG SLVE+ +V+ F S SHP IY + + +++ GY PD + + DV++D
Sbjct: 570 TPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDV 628
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K + L HS+KLAIAF L++ S G+PI I +NLR+C DCH TK IS++ REIIVRD
Sbjct: 629 KVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMH 688
Query: 590 RFHRFKDGTCSCRDYW 605
RFH FKDG CSC DYW
Sbjct: 689 RFHLFKDGVCSCGDYW 704
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 190/389 (48%), Gaps = 22/389 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQ 90
+LK C +L+ K++H V+ GF WN F + N+ A C ++ A ++F +
Sbjct: 36 LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCR-----QINDAYNMFDR 90
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ E +NT+I G+ + + AL L M E G PD+ T ++ A A + L+ G
Sbjct: 91 MPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIG 150
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
M +HG+V + GFE + V +L++MY KC V A IF MD ++V SW+++I + +
Sbjct: 151 MAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQS 210
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + +F +M +E +P ++ L AC LG L+ GK H + + +V V
Sbjct: 211 GDAEGAMLIFQKMLDEGV-QPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSV 269
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SLI MY KC ++ +F+ + +K ++++ MI G A +G EAL+ F EM +
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNI 329
Query: 331 EPDDVVYVGVLSACSHAGLVNEGL----LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+PD V V+ A + + + L R + V T +VD+ + G +
Sbjct: 330 KPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMT-----ALVDMYAKCGAI 384
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVH 415
A +L M ++ + W +++ H
Sbjct: 385 HTARKLFDMMN-ARHVITWNAMIDGYGTH 412
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 136/265 (51%), Gaps = 4/265 (1%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+++G+ K + AL ++ M V P + F L K C LK G +IHG V G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F +LF ++NMY KC ++ A +F +M ++ + W+ +I+ +A NG L L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M +E+ RP+ +VS+L A L +G HG ++R V V T+L+DMY KC
Sbjct: 121 RM-SEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G + +F M + ++++ MI G G + A+ IF +ML EG++P +V +G L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239
Query: 342 SACSHAGLVNEGLLC---FDRMKLE 363
AC+ G + G D++KL+
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLD 264
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 248/592 (41%), Positives = 363/592 (61%), Gaps = 18/592 (3%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---D 82
N + + L +L C +L + K++HA ++ N S+L + H S+ D
Sbjct: 20 NSKTHQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHN----SSLFLYSRILHVSSLIDFD 75
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKA 140
YAC +F QID P +F +NTLI + ++ E+A+ ++ M E G VEPD TFP L KA
Sbjct: 76 YACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKA 135
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA + AL EG Q H +FK+G + D++V NSLI++Y C + A +F++M +S+ SW
Sbjct: 136 CAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSW 195
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+ +I A+ +GL+ LKLF EM N + P+ + S++SAC +GAL LG H ++
Sbjct: 196 NVMIDAYVQSGLFENALKLFVEMQNS--FEPDGYTMQSIVSACAGIGALSLGMWAHAYVL 253
Query: 261 RNIS---ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
R S A +V++ +SL+DMY KCG L +F M +++ MI LAMHG+G+
Sbjct: 254 RKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQA 313
Query: 318 ALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
AL FS ++ E P+ V +VGVLSAC+H G+V +G FD M +Y+I P ++HYGC+
Sbjct: 314 ALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCL 373
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHH 435
VDL+ R+G + EALEL+ +M I+ + V+WRSLL A K + +E+ E A + Q
Sbjct: 374 VDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTI 433
Query: 436 PSD-YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
S YV+LS +YA A++W DV IR M G+ + PG S +E+ ++F + D SHP
Sbjct: 434 SSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGISHEFFAGDTSHPR 493
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQ-VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
IY +I +E +L+ GYSPD SQ + D ++ K++ LK HS++LAIAF L++L G
Sbjct: 494 IKEIYGVIDLIEEKLERRGYSPDCSQATMVDEPDNIKQQSLKLHSERLAIAFGLLNLKPG 553
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+P+RI +NLR+CNDCH TKLIS I+ EII+RDR RFH FK G CSC D+W
Sbjct: 554 TPVRIFKNLRVCNDCHQVTKLISEIFNVEIIMRDRNRFHHFKHGMCSCMDFW 605
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/643 (37%), Positives = 365/643 (56%), Gaps = 57/643 (8%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L+ QP P L++ +K CK++ E K+VHA ++K G + A+ ++
Sbjct: 4 LMFQPNTASYYPRLDV--------PQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILR 55
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMF-ERGVEP 129
A S + + YA S+F Q+ E F +NT+IR + + +AL ++ +M E VEP
Sbjct: 56 LSATSDFRDIGYALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEP 115
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
+ FTFP++ KACA + L EG Q+HG + K G D FV +L+ MY C +E A+ +F
Sbjct: 116 NQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLF 175
Query: 190 -----------------------------------------------KQMDQKSVASWSA 202
+M Q+SV SW+
Sbjct: 176 YRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNV 235
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ +A NG + E +++F M P LVSVL A + LG L+LGK H +N
Sbjct: 236 MISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKN 295
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
++ ++ ++L+DMY KCG +EK + +F + +T++ +I GLAMHG+ + +
Sbjct: 296 KIRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYL 355
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
S M + G+ P DV Y+ +LSACSHAGLV+EG F+ M + P ++HYGC+VDL+GR
Sbjct: 356 SRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGR 415
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG L EA ELI +MP++ +DV+W++LL ASK+H N++IG AA+ L Q+ H YV L
Sbjct: 416 AGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVAL 475
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SNMYA + W VA +R M + + PG S +E+ +++F+ +D SH +I+ M+
Sbjct: 476 SNMYASSGNWDGVAAVRLMMKDMDIRKDPGCSWIEIDGVIHEFLVEDDSHSRAKDIHSML 535
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
++ +L EG+ PD +QVL +DE K L HS+K+A+AF LI +P+ I +NL
Sbjct: 536 EEISNKLSLEGHMPDTTQVLLKMDEKHKESVLHYHSEKIAVAFGLISTPPKTPLCIVKNL 595
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCH+ KLIS +YER+I++RDRKRFH F+ G+CSC DYW
Sbjct: 596 RICEDCHSSMKLISKMYERKIVIRDRKRFHHFEHGSCSCMDYW 638
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/584 (41%), Positives = 350/584 (59%), Gaps = 14/584 (2%)
Query: 32 QECLTILK---TCKNLEEFKKVHAHVLKWG---FFWNPFCASNLVATCALSHWGSMDYAC 85
+ C+ +L+ +L K++HA L+ +P A +L+ A + YA
Sbjct: 19 RHCVALLRLHLASPSLATAKQLHARALRAAPGVTPSHPLLAKHLLFHLAALKAPPLRYAV 78
Query: 86 SIFRQI-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++ + P F NT++R F AL L+ PD T+P L +ACA+L
Sbjct: 79 AVLSGLLPSPDPFSLNTVLRIFASSARPRVALALHRRHL---APPDTHTYPPLLQACARL 135
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSA 202
AL+ G +H K G +FV+NSL+++YG C E A +F ++ ++++ SW++
Sbjct: 136 LALRYGEGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNS 195
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ A+NG +E L +F EM E + P+ +VSVL+AC +G L LG+ H + +
Sbjct: 196 VLNGFAANGRPNEVLTVFREML-EVEFAPDGFTVVSVLTACAEIGVLALGRRVHVFVAKV 254
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSI 321
N +LID+Y KCG ++ +F M + ++++ +I GLA++G G +AL +
Sbjct: 255 GLVGNAHAGNALIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQL 314
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
FS M RE L P ++ VGVL ACSH GLV++G FD+MK EY I P ++H GC+VDL+G
Sbjct: 315 FSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLG 374
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG + EA I +MP++ N VVWR+LL A +H LEIGE A L +++ H DYVL
Sbjct: 375 RAGRVEEAHNYITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVL 434
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA RW DV +R M + G+ ++PG SLVE+ VY+FV DRSHP D IYEM
Sbjct: 435 LSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSLVELRNSVYEFVMGDRSHPETDQIYEM 494
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + +L+ +GY P S VL D++++EK L HS++LAIAFAL+ G+PIRI +N
Sbjct: 495 LGDIAERLRRQGYIPHTSNVLADIEDEEKESALNYHSERLAIAFALLKSLPGTPIRIVKN 554
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH KLIS +Y+REIIVRDR RFH FK G CSC+DYW
Sbjct: 555 LRVCGDCHMAIKLISKVYDREIIVRDRSRFHHFKGGACSCKDYW 598
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/557 (39%), Positives = 345/557 (61%), Gaps = 4/557 (0%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H +++K +P L+ +C + S+ YA +F +I P +NT+IR +
Sbjct: 6 RLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSR 65
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+LF + M G+ DNFTFP + KAC++LQ + +H + K G + D+FV
Sbjct: 66 FFP-SHSLFYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGLDSDIFV 121
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
QN+LI +YG C +E A +F +M ++ SWS +IA+ +NG SE L LF +M E
Sbjct: 122 QNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDK 181
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+E ++SV+SA +HLG L+LG+ + R ++V + T+LIDM+ +CG +++ +
Sbjct: 182 VVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESI 241
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F MA + LT++ +I+GL +HG+ EAL++F M + G++PD V + GVL ACSH G
Sbjct: 242 VVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGG 301
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV EG F+ ++ YR+ P + HYGC+VD++GRAG+L EA + ++ MP++ N ++WR+L
Sbjct: 302 LVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTL 361
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A H+NL + E + +I+S D VLLSN+Y A RW + A IR++M K +
Sbjct: 362 LGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIG 421
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S + V + +++FVS D SHP ++I + + + L+ GY VL D++E+
Sbjct: 422 KEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEE 481
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
E+ L HS+KLA+AFA++ + IRI +NLR+C DCH++ K ISV +ER+II+RDR
Sbjct: 482 EREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDR 541
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+ G CSC DYW
Sbjct: 542 NRFHHFEKGLCSCHDYW 558
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 111/217 (51%), Gaps = 4/217 (1%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C L+ +H+ ++K+G + F + L+ C + GS++ A +F ++ E +
Sbjct: 93 VLKACSRLQINLHLHSLIVKYGLDSDIFVQNALI--CVYGYCGSLEMAVKVFDEMSERDS 150
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
++T+I F+ EAL L+ +M E V PD T ++ A + L L+ G +
Sbjct: 151 VSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRA 210
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ ++G + + +LI+M+ +C ++ + +F++M ++V +W+A+I +G +E
Sbjct: 211 FIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTE 270
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
L +F M +P+ VL AC+H G + G
Sbjct: 271 ALAMFHSMRKSGV-QPDYVTFSGVLVACSHGGLVKEG 306
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/608 (39%), Positives = 362/608 (59%), Gaps = 32/608 (5%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLE-EFKKVHAHVLKWGFFWN-PFCAS 67
S L T PE P +C+ +L+ C + + + + +HA ++ G N P
Sbjct: 8 SFLSTTPEYPLT-----------KCIYLLQFCASSKHKLRXIHAFSIRHGVLLNNPDMGK 56
Query: 68 NLVAT-CALSHWGS---------MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
+L+ T +LS S + YA ++F I P F +NT+ RG+ + AL
Sbjct: 57 HLIFTIVSLSAPMSYAYNVFTWVLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALR 116
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
Y +M +EPD T+P L KA +K ++EG IH + GFE +FVQNSL+++Y
Sbjct: 117 FYRQMIVSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYA 176
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
C E A +F+ M + + + ++I A NG SE L LF EM+ E P+ +V
Sbjct: 177 ACGDTESAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGV-EPDGFTVV 235
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S+LSA LGAL+LG+ H L++ N V SL+D+Y KC + + ++
Sbjct: 236 SLLSASAELGALELGRRVHVYLLKVGLRENSHVTNSLLDLYAKCDAIWE--------XER 287
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ +I GLA++G G+EAL +F EM +GL P ++ +VGVL ACSH G+++EG F
Sbjct: 288 NAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYF 347
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
RMK E+ I+P ++HYGC+VDL+ RAG++ +A E IQ+MP+Q N V WR+LL A +H +
Sbjct: 348 RRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGH 407
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
L +GE A +L ++ H DYVLLSN+Y RW DV IR M G+ ++ G+SLVE
Sbjct: 408 LGLGETARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSLVE 467
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
+ +VY+F +RSHP ++Y ++ ++ LK EGY P + VL D++E+EK + L H
Sbjct: 468 LGNRVYEFTMGNRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYH 527
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+K AIAF ++ + G+ IR+ +NLR+C DCH KL++ +Y+REI++RDR RFH F+ G
Sbjct: 528 SEKXAIAFMRLNTAPGTTIRVMKNLRVCADCHMAIKLMAKVYDREIVIRDRGRFHHFRGG 587
Query: 598 TCSCRDYW 605
+CSC+DYW
Sbjct: 588 SCSCKDYW 595
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/612 (38%), Positives = 353/612 (57%), Gaps = 35/612 (5%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ + +++L +C L+E K++HA ++ G NP VAT AL + ++DYA +
Sbjct: 6 RIAKHPTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKL 65
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF---ERGVEPDNFTFPALFKACAKL 144
+ P F N++IR + K ++ Y + + PDN+TF L + CA+L
Sbjct: 66 LNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQL 125
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYG--------------------------- 177
QA G+ +HG V K GFE D VQ L+ MY
Sbjct: 126 QAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAML 185
Query: 178 ----KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
KC ++FA +F +M ++ +W+A+IA +A G E L +F M E + E
Sbjct: 186 NACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGV-KLNE 244
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+V VLSACTHL LD G+ H + R + V + T+L+DMY KCG +++ + +F
Sbjct: 245 VSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWG 304
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M ++ T+S I GLAM+G G+E+L +F++M REG++P+ + ++ VL CS GLV EG
Sbjct: 305 MKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEG 364
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
FD M+ Y I P ++HYG +VD+ GRAG L EAL I SMP++ + W +LL A +
Sbjct: 365 RKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACR 424
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
++ N E+GEIA + + ++ + YVLLSN+YA + W V+ +R M +KG+ + PG
Sbjct: 425 MYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGC 484
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S++EV +V++F+ D+SHP +D I + ++ L+ GY + + VL D++E+EK +
Sbjct: 485 SVIEVDGEVHEFIVGDKSHPRYDEIEMKLEEISKCLRLSGYVANTNPVLFDIEEEEKEDA 544
Query: 534 LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHR 593
L HS+K+AIAF LI L PIR+ NLR+C DCH K+IS I+ REIIVRDR RFH
Sbjct: 545 LSKHSEKVAIAFGLISLKGVVPIRVVMNLRICWDCHNVAKMISKIFNREIIVRDRNRFHH 604
Query: 594 FKDGTCSCRDYW 605
FKDG CSC+DYW
Sbjct: 605 FKDGECSCKDYW 616
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/571 (39%), Positives = 341/571 (59%), Gaps = 1/571 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+ + N+ K +HA+V++ + + + G + A +F + +
Sbjct: 202 VNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK 261
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ +I G ++ EE L+ M E + P+ T +L C AL+ G Q+H
Sbjct: 262 TVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLH 321
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
++ + GF L + +L++MYGKC + A A+F + V W+A+++A+A
Sbjct: 322 AYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCID 381
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ LF +M RP + +VS+LS C GALDLGK H + + ++ I+ T+L
Sbjct: 382 QAFNLFDQMRTSGV-RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTAL 440
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG + LF + ++ +I+G AMHG G+EAL IF+EM R+G++P+D
Sbjct: 441 VDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 500
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ ++G+L ACSHAGLV EG F++M + +VP ++HYGC+VDL+GRAG+L EA E+I+
Sbjct: 501 ITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIK 560
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SMPI+ N +VW +L++A ++H N ++GE+AA L +I + VL+SN+YA A RW D
Sbjct: 561 SMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSD 620
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
A +R M + G+ + PG S++EV V++F+ D+SHP I EM+ +M +L GY
Sbjct: 621 AAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGY 680
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD S VL ++DE+EK L HS+KLA+AF LI + +PIRI +NLR+CNDCH TKL
Sbjct: 681 VPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKL 740
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S IY R IIVRDR RFH F++G CSC DYW
Sbjct: 741 LSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 185/388 (47%), Gaps = 16/388 (4%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++LK C + + K++H VLK G + F + L+ CA ++YA +F
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECA-----CVEYARLVFD 153
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ E ++T+IR + EF+ AL L EM V P ++ A ++
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 150 GMQIHGHVFKVGFECDLFV--QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G +H +V + + V +L++MY KC + A +F + QK+V SW+A+IA
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ E KLF M E + P E ++S++ C GAL LGK H ++RN +++
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIF-PNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ + T+L+DMY KC + LF ++ + ++ M+S A +A ++F +M
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G+ P V V +LS C+ AG ++ G + E V + + +VD+ + G +
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA-LVDMYAKCGDIN 451
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
A L I ++ +W ++++ +H
Sbjct: 452 AAGRLFIE-AISRDICMWNAIITGFAMH 478
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 147/284 (51%), Gaps = 7/284 (2%)
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
NF P++ KAC ++ + G +IHG V K G + D+FV N+L+ MYG+C VE+A +F
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+M ++ V SWS +I + + N + L+L EMN + RP E +VS+++ +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQV-RPSEVAMVSMVNLFADTANMR 212
Query: 251 LGKCTHGSLIRNISA--LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
+GK H +IRN + + V T+L+DMY KCG L LF + K ++++ MI+G
Sbjct: 213 MGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 272
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
+ +E +F M E + P+++ + ++ C G + G + L
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYI-LRNGFSV 331
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSA 411
++ +VD+ G+ + A L S Q DV +W ++LSA
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDS--TQNRDVMIWTAMLSA 373
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/569 (40%), Positives = 347/569 (60%), Gaps = 6/569 (1%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCA--SNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
T +L K++HAH+ G F P S L+ ALS G++ +A F QI P
Sbjct: 13 TTLSLPHTKQLHAHLFTTGQFRLPISPARSKLLELYALS-LGNLSFAILTFSQIRTPSTN 71
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
D+N +IRGF++ A Y M + + D T + KACA++ A E +QIH H+
Sbjct: 72 DWNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHI 131
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ GF D + +L+++Y K +++ A +F +M ++ +ASW+A+I+ A +E L
Sbjct: 132 VRKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEAL 191
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF M + ++P E ++ LSAC LG G+ HG + +N V +IDM
Sbjct: 192 SLFKRMEIDG-FKPNEISVLGALSACAQLGDFKEGEKIHGYIKVERFDMNAQVCNVVIDM 250
Query: 278 YVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y KCG ++K +F M+ K +T++ MI AMHG+G +AL +F +M + G+ PDDV
Sbjct: 251 YAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVS 310
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
Y+ VL AC+H GLV EG F+ M+ + P V+HYG VVDL+GRAG L EA +++ SM
Sbjct: 311 YLAVLCACNHGGLVEEGFRLFNSME-NCGVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSM 369
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P + V+W++LL AS+ H N+EI E ++ L ++ S+H D+VLLSN+YA +RW DV
Sbjct: 370 PTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVG 429
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
++R M ++ + + PG S +E ++KF + D+SH +W IY + ++ +++K GY
Sbjct: 430 RVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIRFRVKEYGYVA 489
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
+ S VL D+ E++K L HS+KLA+AF LI S+G+PI++ +NLR+C DCH KLIS
Sbjct: 490 ETSFVLHDIGEEDKENVLGHHSEKLAVAFGLISTSEGTPIQVIKNLRICGDCHFVIKLIS 549
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IY+REIIVRDR RFHRFK+G CSCRDYW
Sbjct: 550 KIYDREIIVRDRVRFHRFKEGFCSCRDYW 578
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 350/606 (57%), Gaps = 34/606 (5%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS-MDYACSIFRQI 91
E ++ L+ C EE K++HA +LK G + + + ++ C S + YA +F
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D P F +N +IRGF E E +L LY M + +TFP+L KAC+ L A +E
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYG-------------------------------KCE 180
QIH + K+G+E D++ NSLIN Y K
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
K++ A +F++M +K+ SW+ +I+ + + E L+LF EM N P+ L + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV-EPDNVSLANAL 254
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SAC LGAL+ GK H L + ++ ++ LIDMY KCG +E+ L +F+ + K
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
++ +ISG A HG G+EA+S F EM + G++P+ + + VL+ACS+ GLV EG L F M
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ +Y + PT++HYGC+VDL+GRAG+L EA IQ MP++ N V+W +LL A ++H N+E+
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GE + L I+ +H YV +N++A ++W A+ R M +G+ + PG S + +
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEG 494
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD-VDEDEKRERLKGHSQ 539
++F++ DRSHP + I M +L+ GY P++ ++L D VD+DE+ + HS+
Sbjct: 495 TTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSE 554
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLAI + LI G+ IRI +NLR+C DCH TKLIS IY+R+I++RDR RFH F+DG C
Sbjct: 555 KLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKC 614
Query: 600 SCRDYW 605
SC DYW
Sbjct: 615 SCGDYW 620
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/582 (40%), Positives = 357/582 (61%), Gaps = 16/582 (2%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+K+C +L + K++H +G+ + F AS L+ S G ++ A +F +I E
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDM--YSKCGYLNDARKLFDEIPER 150
Query: 95 GAFDFNTLIRGFVKEVEFEEALFL-----------YNEMFERGVEPDNFTFPALFKACAK 143
+ ++I G+V+ EA+FL Y+E+ GV D+ + ACA+
Sbjct: 151 NVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACAR 210
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+ +HG K GFE L V N+L++ Y KC ++ + +F M++ V SW+++
Sbjct: 211 VCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSL 270
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA +A NGL E LF +M R L +VL AC H GAL +GKC H +++
Sbjct: 271 IAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME 330
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N++V TS++DMY KCG +E F + K +++VM++G MHG GKEA+ +F
Sbjct: 331 LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFY 390
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EM+R G++P+ + +V VL+ACSHAGL+ EG F++MK E+ + P ++HY C+VDL+GRA
Sbjct: 391 EMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRA 450
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA LIQ M ++ + +VW SLL A ++H N+E+GEI+A+ LF+++ + YVLLS
Sbjct: 451 GYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLS 510
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A RW DV ++R M + GL ++PG+S+VE +V+ F+ D+ HP + IYE +
Sbjct: 511 NIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLD 570
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +L+ GY P+++ VL DVD +EK L+ HS+KLA+AF +++ GS I+I +NLR
Sbjct: 571 ELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLR 630
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH KLIS I REI++RD KRFH FKDG CSC DYW
Sbjct: 631 ICGDCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 174/344 (50%), Gaps = 25/344 (7%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ +D+ + +N++I F + + +AL+ ++ M + + P+ TFP K+C+ L L
Sbjct: 44 KYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLC 103
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G QIH F G+ D+FV ++LI+MY KC + A +F ++ +++V SW+++I+ +
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYV 163
Query: 209 SNGLWSECLKLFGE--MNNEKCWRP--------EESILVSVLSACTHLGALDLGKCTHGS 258
N E + LF E + +E + + +L V+SAC + + +C HG
Sbjct: 164 QNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGL 223
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++ + V +L+D Y KCG + +F M + +++ +I+ A +G EA
Sbjct: 224 AVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEA 283
Query: 319 LSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYG 374
S+FS+M++ G + + V VL AC+H+G + G D +M+LE +V
Sbjct: 284 FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTS--- 340
Query: 375 CVVDLM---GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+VD+ GR M +A + ++ ++N W +++ +H
Sbjct: 341 -IVDMYCKCGRVEMARKAFDRLK----RKNVKSWTVMVAGYGMH 379
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/611 (38%), Positives = 363/611 (59%), Gaps = 8/611 (1%)
Query: 1 MTRTSVLH---QSLLLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLK 56
M T +L SL E P P L L+++ C +L E K++ A+ +K
Sbjct: 1 MATTPILQCVSHSLTKLNTEAPRHEPNTAALEPPSSSILSLIPKCTSLRELKQIQAYTIK 60
Query: 57 WGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEA 115
NP + L+ C + SMD+A +F +I +P FNT+ RG+ + + A
Sbjct: 61 -THQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRA 119
Query: 116 LFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM 175
+ L +++ G+ PD++TF +L KACA+L+AL+EG Q+H K+G +++V +LINM
Sbjct: 120 ILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINM 179
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
Y C V+ A +F ++ + V +++AII + A N +E L LF E+ E +P +
Sbjct: 180 YTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQ-ESGLKPTDVT 238
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
++ LS+C LGALDLG+ H + +N V V T+LIDMY KCG L+ + +F+ M
Sbjct: 239 MLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMP 298
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ +S MI A HG G +A+S+ EM + ++PD++ ++G+L ACSH GLV EG
Sbjct: 299 RRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYE 358
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M EY IVP+++HYGC++DL+GRAG L EA + I +PI+ ++WR+LLS+ H
Sbjct: 359 YFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSH 418
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N+E+ ++ + +F+++ H DYV+LSN+ AR RW DV +R M KG + PG S
Sbjct: 419 GNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSS 478
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL-RDVDEDEKRERL 534
+EV V++F S D H ++ + ++ +LK GY PD S V D++++EK L
Sbjct: 479 IEVNNVVHEFFSGDGVHSTSTILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVL 538
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
+ HS+KLAI + L++ G+ IR+ +NLR+C DCH K IS+I+ R+II+RD +RFH F
Sbjct: 539 RYHSEKLAITYGLLNTPPGTTIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHF 598
Query: 595 KDGTCSCRDYW 605
KDG CSC DYW
Sbjct: 599 KDGKCSCGDYW 609
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/589 (38%), Positives = 355/589 (60%), Gaps = 34/589 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H H++K GF N F + L+ +LS G + A +F + + +N +I G+
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLS--GEVSVARGVFDRSSKGDVVTWNVMISGYN 196
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +F+E++ L++EM V P + T ++ AC+KL+ L G ++H +V + E
Sbjct: 197 RSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV 256
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL--------------- 212
++N+LI+MY C ++ A IF M + V SW+AI+ + G
Sbjct: 257 LENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD 316
Query: 213 ---WS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
W+ E L LF EM +P+E +VS+L+AC HLGAL+LG+
Sbjct: 317 FVSWTAMIDGYLQVNRFKEVLSLFREMQAANI-KPDEFTMVSILTACAHLGALELGEWIK 375
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ +N ++ V +LIDMY CG +EK + +F M + +++++ +I GLA++G G+
Sbjct: 376 AYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGE 435
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EAL +FS+ML+ + PD+V +GVL AC+H+G+V++G F RM ++ I P V HYGC+
Sbjct: 436 EALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCM 495
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GRAG L EA E+I++MP++ N +VW SLL A +VH + E+ E+AA+ + ++ +
Sbjct: 496 VDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENG 555
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLL N+YA RW + ++R M +G+ ++PG SL+E+ V++FV+ D+ HP
Sbjct: 556 AVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSK 615
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
IY + +M LKF GYSPD S+V D+ E+EK + HS+KLAIAF LI G I
Sbjct: 616 EIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTI 675
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLRMC DCH KL+S +Y RE+IVRDR RFH F+ G+CSC+DYW
Sbjct: 676 RIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 217/427 (50%), Gaps = 46/427 (10%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P L + L+++KTCK++ + K++H+ + G NP + ++A C
Sbjct: 9 PP--PTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHEL 66
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M+YA +F + P F +N +I+G+ + A+ +Y EM ERGV PD +T+P L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
K + A+K G ++H H+ K+GF ++FVQN+LI++Y +V A +F + + V
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I+ + + + E +KLF EM + P LVSVLSAC+ L L++GK H
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVL-PSSITLVSVLSACSKLKDLNVGKRVH-- 243
Query: 259 LIRNISALNV----IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
R + L + ++E +LIDMY CG ++ L +F M + ++++ +++G GQ
Sbjct: 244 --RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQ 301
Query: 315 G-------------------------------KEALSIFSEMLREGLEPDDVVYVGVLSA 343
KE LS+F EM ++PD+ V +L+A
Sbjct: 302 VGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTA 361
Query: 344 CSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
C+H G + G + K E +I V + ++D+ G + +A+ + +MP ++
Sbjct: 362 CAHLGALELGEWIKAYIDKNEIKIDSFVGN--ALIDMYFNCGNVEKAIRIFNAMP-HRDK 418
Query: 403 VVWRSLL 409
+ W +++
Sbjct: 419 ISWTAVI 425
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/598 (40%), Positives = 361/598 (60%), Gaps = 30/598 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQIDE 93
+++L CK+L E +++HA ++K + F S L+A C+LS G +DYA S+F +I
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEM-----FERGVEPDNFTFPALFKACAKLQALK 148
P +F F LI+GF E+L LY M + GVE F+ P++ KAC KL A
Sbjct: 70 PNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAFD 126
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
EG Q+HG V K D FV NS++ MY ++E A +F +M + V SW+++IA +
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 209 SNGLWSECLKLFGEMNNEKC------------------WRPEESILVSVLSACTHLGALD 250
G +LF EM RP+ +VSVLSA LG ++
Sbjct: 187 KAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVE 246
Query: 251 LGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISG 308
GK H + N I + + ++LIDMY KCG +E +FR ++ + + ++ MISG
Sbjct: 247 EGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISG 306
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
LA+HG +EAL IF EM R +EP+++ ++G+LS CSH GLV EG F+ M +Y+IVP
Sbjct: 307 LAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVP 366
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
+QHYGC++DL GRAG L +AL +IQ+MP + + + W+++LSAS H ++EIG+ AA
Sbjct: 367 RIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRA 426
Query: 429 FQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQ 488
++ S YVLLSN+YA+A RW DVAKIR M +G+ + G S + V KV++F+
Sbjct: 427 IELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFLLG 486
Query: 489 DRSHPAWDN-IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
++ + I ++ +LK +GY PD++QVL D++++ K L HS+K+AIAF L
Sbjct: 487 KELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLLNLHSEKMAIAFGL 546
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IH+++ +PI I +NLR+C DCH + KL+S +Y R+II+RD+ RFH F++G CSC +YW
Sbjct: 547 IHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHFENGCCSCNEYW 604
>gi|224139652|ref|XP_002323212.1| predicted protein [Populus trichocarpa]
gi|222867842|gb|EEF04973.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/579 (39%), Positives = 352/579 (60%), Gaps = 5/579 (0%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K LT+L+ C NL KK+ AHV+ G +P +++++ CA+S GS+ YA +FR
Sbjct: 8 KANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLFR 67
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALK 148
I P +N++IRGF + +A+F YN M F+ PD FTF KAC +++ALK
Sbjct: 68 HILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKALK 127
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+ ++HG + + G+E D+ V L+ YG+ VE A +F M ++ + +W+A+I+ ++
Sbjct: 128 KCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCYS 187
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G E L+++ M NE + LV +LS+C+H+GAL++G H NV
Sbjct: 188 QAGYHQEALRVYDYMRNENVG-VDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +LIDMY KCG L+ L +F M + T++ MI G +HG G EA+ F++ML
Sbjct: 247 FVGNALIDMYAKCGSLDGALEVFNGMP-RDAFTWNSMIVGFGVHGFGDEAIYFFNQMLEA 305
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+ P+ + ++G+L CSH GLV EG+ F +M ++ + P ++HYGC+VD+ GRAG L +
Sbjct: 306 GVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCIVDMYGRAGKLEK 365
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
ALE+I P Q + V+WR LLS+SK+H N+ IGEIA +NL Q+ + + D VLL+ +YA
Sbjct: 366 ALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAG 425
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A VA++R + +G+ +PG+S +EV+ +V++FV D+SHP + IY+ + ++ +
Sbjct: 426 ANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSEMIYQKLEEVTHK 485
Query: 509 LKFEGYSPDISQVL--RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
GY D SQ + E+ HS+KLAIAF L +G+ +RI +NLR+C
Sbjct: 486 ATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCR 545
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH +TK +S + R+IIVRDR RFH FK G CSCRDYW
Sbjct: 546 DCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/598 (38%), Positives = 362/598 (60%), Gaps = 20/598 (3%)
Query: 21 KGPELNLRLKEQ-------ECLTILKTCKNLEEF---KKVHAHVLKWGF--FWNPFCA-S 67
K EL LR++++ +T+L ++ K +H + ++ GF N A +
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
++ + C GS++ A IF +D+ +N+++ G+V+ E E+A+ ++ +M E G+
Sbjct: 291 DMYSKC-----GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+P T ACA L L+ G +H V ++ D+ V NSLI+MY KC++V+ AS
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASD 405
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF ++ ++ SW+A+I +A NG SE L F EM + +P+ +VSV+ A L
Sbjct: 406 IFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLG-MKPDSFTMVSVIPALAELS 464
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
K HG +IR+ N+ V T+L+DMY KCG + LF M++D+ +T++ MI
Sbjct: 465 VTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMID 524
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
G HG G+ AL +F +M + +EP+D+ Y+ V+SACSH+GLV+EGL F MK +Y +
Sbjct: 525 GYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLE 584
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
P++ HYG +VDL+GRAG + EA + I++MPI V+ + A K+H N+E+GE AAK
Sbjct: 585 PSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKK 644
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
LF++N +VLL+N+YA +W VA++R M KGL ++PG S+VE+ +V+ F S
Sbjct: 645 LFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYS 704
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
+HP IY + ++ +++K GY PD + +L DV++D + + L HS+KLAIAF L
Sbjct: 705 GSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGL 763
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ S G+ I + +NLR+C DCH TK IS++ REIIVRD +RFH FK+G CSC DYW
Sbjct: 764 LNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 169/317 (53%), Gaps = 3/317 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ C +++E ++ V+K G + + LV+ S +GS++ A +F ID+
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSL--FSKYGSINEAARVFEPIDDKLD 112
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
++T+++G+ K E AL M V+P + F L K C LK G +IHG
Sbjct: 113 ALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQ 172
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ F ++F ++NMY KC +++ A +F +M ++ + SW+ IIA + NG +
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKA 232
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L+L M +E RP+ LV+VL A +G L +GK HG IR A V + T+L D
Sbjct: 233 LELVLRMQDEG-QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KCG +E +F M K ++++ M+ G +G+ ++A+++F +ML EG++P V
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVT 351
Query: 337 YVGVLSACSHAGLVNEG 353
+ L AC+ G + G
Sbjct: 352 IMEALHACADLGDLERG 368
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/571 (40%), Positives = 355/571 (62%), Gaps = 4/571 (0%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++ K+C+N E K++H H K GF + + + L+ S+ G + A +F ++++
Sbjct: 93 SLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNM--YSNCGCLVSARKVFDKMEDKT 150
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ T+I + + EA+ L++ M + V+P+ T + ACA+ + L +IH
Sbjct: 151 VVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIH 210
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
++ + GF + + L+++Y KC V+ A +F + +K++ SW+ +I H + +
Sbjct: 211 EYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYE 270
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L LF EM K + ++ + S+L ACTHLGAL+LGK H + + ++V + T+L
Sbjct: 271 EALLLFREMQT-KGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG +E + +F M +K +T++ +I GLAM GQ + AL F EM +G++PD
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +VGVL+ACSHAG V+EG+ F+ M Y I PT++HYG +VD++GRAG + EA ELI+
Sbjct: 390 ITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SMP+ + V LL A ++H NLE E AAK L +I+ +H YVLLSN+Y +++W +
Sbjct: 450 SMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEE 509
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
+ R MA +G+ + PG S +EV V++FV D SH I EM+ M +LK GY
Sbjct: 510 AKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGY 569
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD S+VL D+ E+EK L HS+KLAIAF L+ S G+PIR+ +NLR+C+DCH+ TKL
Sbjct: 570 VPDKSEVLFDMAEEEKETELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKL 629
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS +Y REIIVRDR RFH FKDGTCSCR +W
Sbjct: 630 ISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660
Score = 231 bits (589), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 207/366 (56%), Gaps = 5/366 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+ + K++HA +L+ G F++PF AS +VA C+L GS+ YA +F QI P ++ N++I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
RG + +EAL Y EM +G+ PD +TFP+LFK+C + EG QIH H K+GF
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFA 117
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D + QN+L+NMY C + A +F +M+ K+V SW+ +I HA +E ++LF M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ +P E LV+VL+AC L + K H + + +V++ T L+D+Y KCGC
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
++ LF +K ++++MI+G +EAL +F EM +G++ D V +L A
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C+H G + G +K + RI V +VD+ + G + A+++ MP +++ +
Sbjct: 298 CTHLGALELGKWLHAYIK-KQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDVM 355
Query: 404 VWRSLL 409
W +L+
Sbjct: 356 TWTALI 361
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/574 (40%), Positives = 343/574 (59%), Gaps = 12/574 (2%)
Query: 38 LKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+K+C +L + V A+ K GF + F ++L+ A+C G + A +F +
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASC-----GDVVAAHVLFHTV 232
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
G +N +I G+VK +++E + ++ M E D T ++ AC +L G
Sbjct: 233 QVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQ 292
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
I + + G + +L++MY KC +++ A +F +M + V +WSA+I+ + +
Sbjct: 293 WIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSD 352
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E L +F EM + P + +VSVLSAC LGAL+ GK H + R L VI+
Sbjct: 353 RCREALAIFNEMQGTEV-NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILG 411
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+D Y KCGC++ + F M + T++ +I G+A +G+ +EAL +FS ML +E
Sbjct: 412 TALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIE 471
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P DV ++GVL ACSH LV EG F M +Y I P ++HYGC+VDL+GRAG++ EA +
Sbjct: 472 PTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQ 531
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I++MPI+ N VVWR+LLSA VH N+EIGE A K + ++ H +Y+LLSN YA +
Sbjct: 532 FIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQ 591
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W + A +R EM KG+ + PG SL+E+ +++F ++D HP IYE +H+M +K
Sbjct: 592 WKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKM 651
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P+ + DVDE EK+ + HS+KLAIAF L+ G+ IR+++NLR+C DCH+
Sbjct: 652 VGYIPNTADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSA 711
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS +Y REIIVRDR RFH FKDG CSC DYW
Sbjct: 712 TKLISKVYNREIIVRDRNRFHHFKDGLCSCNDYW 745
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 20/339 (5%)
Query: 81 MDYACSIFRQIDEP--GAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPAL 137
+ YA +FR P A +N LIR F++ E+AL L+ EM + V PD T
Sbjct: 118 LSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANT 177
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
K+C+++ L G + + FK GF D FV NSLI+MY C V A +F + K V
Sbjct: 178 VKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGV 237
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP-EESILVSVLSACTHLGALDLGK--- 253
+W+A+IA + NG W E +++F M + P +E L+SV +AC LG +LG+
Sbjct: 238 IAWNAMIAGYVKNGDWKEVVEMFKGMLEVRA--PFDEVTLLSVATACGRLGDANLGQWIA 295
Query: 254 --CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
++R+ + + T+L+DMY KCG L+K LF M + + +S MISG
Sbjct: 296 EYAEEKGMLRSRN-----LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQ 350
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP-TV 370
+ +EAL+IF+EM + P+DV V VLSAC+ G + G ++ + +P TV
Sbjct: 351 SDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIR--RKDLPLTV 408
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+VD + G + +A++ +SMP+ +N W +L+
Sbjct: 409 ILGTALVDFYAKCGCIKDAVKAFESMPV-RNTWTWTALI 446
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/618 (37%), Positives = 352/618 (56%), Gaps = 39/618 (6%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS----- 80
LR K + L +L++C + + K +H +L+ + F AS L+A +
Sbjct: 8 TLRFKHPK-LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPT 66
Query: 81 --MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
+ YA IF QI P F FN LIR F E +A Y +M + + PDN TFP L
Sbjct: 67 NLLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 126
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KA +++ + G Q H + + GF+ D++V+NSL++MY C + A IF QM + V
Sbjct: 127 KASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVV 186
Query: 199 SWSAIIAAHASNGLWSECLKLFGEM--NNEKCWR-------------------------- 230
SW++++A + G+ + ++F EM N W
Sbjct: 187 SWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREG 246
Query: 231 --PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
E+++VSV+S+C HLGAL+ G+ H ++++ +N+I+ T+L+DMY +CG +EK +
Sbjct: 247 VVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAI 306
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F + DK L++S +I GLA+HG +A+ FS+M+R G P D+ VLSACSH G
Sbjct: 307 RVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGG 366
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV++GL ++ MK +Y I P ++HYGC+VD++GRAG L EA I MP++ N + +L
Sbjct: 367 LVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGAL 426
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A K++ N E+ E L ++ H YVLLSN+YA A +W + +R M K +
Sbjct: 427 LGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVK 486
Query: 469 QSPGFSLVEVARKVYKF-VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PG+SL+E+ K+ KF + D+ HP I + ++ +++ GY + DVDE
Sbjct: 487 KPPGWSLIEIDGKINKFSMGDDQKHPEMGKIKRLWEEILGKIRLIGYKGNTGDAFFDVDE 546
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK + HS+KLAIA+ ++ G+ IRI +NLR+C DCHT TKLIS +Y RE IVRD
Sbjct: 547 EEKETAIHMHSEKLAIAYGMMKTKTGTTIRIVKNLRVCEDCHTATKLISEVYGREFIVRD 606
Query: 588 RKRFHRFKDGTCSCRDYW 605
R RFH F++G CSCRDYW
Sbjct: 607 RNRFHHFRNGLCSCRDYW 624
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/586 (41%), Positives = 350/586 (59%), Gaps = 15/586 (2%)
Query: 31 EQECLT--------ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
E CLT +L++C K ++ K++HA V GF ++ A+ LV +
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC--D 124
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S+ A +F +I + F +N LIRG+ +E A+ LY +MF+ G+ PDNFTFP + K
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
ACA L A++ G +IH HV + G+E D+FV +LI+MY KC V A +F ++ +
Sbjct: 185 ACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL 244
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W++++AA++ NG CL L EM RP E+ LV+ +SA AL G+ HG
Sbjct: 245 WNSMLAAYSQNGHPDACLSLCSEMVLTGL-RPTEATLVTAISASADNAALPQGRELHGLS 303
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
R + V+T+L+DMY KCG + LF + K ++++ MI+G AMHG EAL
Sbjct: 304 WRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEAL 363
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F EM R +PD + +VGVLSACSH GL+ EG + F+ M +Y+I PTVQHY C+VDL
Sbjct: 364 DLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDL 422
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+G +G L EA LI M + + VW +LL++ K+H N+E+GEIA + L ++ +Y
Sbjct: 423 LGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNY 482
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
V+LSN+YA+A +W VAK+R M + L +S S +EV KV+ F+S D SHP D IY
Sbjct: 483 VILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIY 542
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ ++ +K GYSP V DV++DEK + HS++LAIAF LI G+ + I
Sbjct: 543 SELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLIT 602
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I EREI VRD R+H FKDG CSC DYW
Sbjct: 603 KNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/509 (43%), Positives = 325/509 (63%), Gaps = 9/509 (1%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEP-DNFTFPALFKACAKLQALKEGMQIHGHVF 158
NT+IRG+ + EA+ LY M +G+ P +NFTFP L +CA+L +L+ G ++H H+
Sbjct: 3 NTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHII 62
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K GFE DLFV+N+LI++Y + A +F + + + S++ +I +A L
Sbjct: 63 KHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALC 122
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDM 277
LFGEM N +E LV+VLSAC LGA DLGK + I N + N I+ +++DM
Sbjct: 123 LFGEMQNS-----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDM 177
Query: 278 YVKCGCLEKGLCLFRMMAD--KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
Y KCG ++ L +FR + K ++ MI+GLA HG G+ A+++F E++ GL+PD+V
Sbjct: 178 YAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+VGVL AC H+GL+ EG F+ M Y I P ++HYGC+VDL+GR G L EA +L+Q
Sbjct: 238 TFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
MP + N V+WR+LLSA + H N++IGEIA + L ++ + H + YVLLSN+ A A +W +
Sbjct: 298 MPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEA 357
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
++R M G+ + PG+S +E+ +++FV+ D+SHP I M+ M +LK GY
Sbjct: 358 RQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYV 417
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P+ +QV+ D+DE+EK + HS+KLA+AF L++ S IRI +NLR+C DCH KL+
Sbjct: 418 PNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLV 477
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
S IY REI VRD RFH F++G+CSC D+
Sbjct: 478 SEIYGREITVRDTMRFHHFRNGSCSCMDF 506
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 148/289 (51%), Gaps = 17/289 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L +C +LE +VH+H++K GF + F + L+ ++ +G+++ A ++F +
Sbjct: 41 LLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSV--FGNLNLARTLFDESLV 98
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT+I+G+ + + E AL L+ EM D T A+ ACA+L A G ++
Sbjct: 99 RDLVSYNTMIKGYAEVNQPESALCLFGEM----QNSDEVTLVAVLSACARLGAFDLGKRL 154
Query: 154 HGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIAAHASN 210
+ + G F + + ++++MY KC ++ A IF+++ + K+ ++++IA A +
Sbjct: 155 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQH 214
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL + +F E+ + +P+E V VL AC H G ++ GK S+ N + +
Sbjct: 215 GLGETAITVFRELISTG-LKPDEVTFVGVLCACGHSGLIEEGKKLFESMF-NAYGIKPQM 272
Query: 271 E--TSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGK 316
E ++D+ + GCLE+ L + M + + + ++S HG K
Sbjct: 273 EHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVK 321
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 92/192 (47%), Gaps = 16/192 (8%)
Query: 31 EQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCAL----SHWGSMDY 83
E + +L C L F K+++ ++ G F N + T A+ + GS+D
Sbjct: 132 EVTLVAVLSACARLGAFDLGKRLYHQYIENGVF-----NQNTILTAAVMDMYAKCGSIDS 186
Query: 84 ACSIFRQIDE--PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
A IFR++ + F FN++I G + E A+ ++ E+ G++PD TF + AC
Sbjct: 187 ALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCAC 246
Query: 142 AKLQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVAS 199
++EG ++ +F G + + ++++ G+ +E A + ++M + +
Sbjct: 247 GHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVI 306
Query: 200 WSAIIAAHASNG 211
W A+++A ++G
Sbjct: 307 WRALLSACRTHG 318
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/608 (39%), Positives = 355/608 (58%), Gaps = 41/608 (6%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA------------------- 74
+LK+C K EE +++HA VLK G + + ++L++ A
Sbjct: 70 LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129
Query: 75 ----------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
+ G A +F +I E +N +I G+V+ +EEAL L+ EM
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV----GFECDLFVQNSLINMYGKCE 180
V PD T ++ ACA+ +++ G Q+H V GF L + N+LI++Y KC
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRPEESILVSV 239
VE A +F+ + K V SW+ +I + L+ E L LF EM + +C P + L+SV
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC--PNDVTLLSV 307
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALN--VIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
L AC HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F M +
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+++ MI G AMHG+ A +FS M +EPDD+ +VG+LSACSH+GL++ G F
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M +Y + P ++HYGC++DL+G +G+ EA E+I +MP++ + V+W SLL A K H N
Sbjct: 428 KSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN 487
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
LE+ E A+ L +I + YVLLSN+YA A RW DVA++R + KG+ + PG S +E
Sbjct: 488 LELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIE 547
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V V++F+ D+ HP IY M+ +M+ QL+ G++PD S+VL++++E+ K L+ H
Sbjct: 548 VDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHH 607
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLAIAF LI G+ + I +NLR+C +CH TKLIS IY+REI+ RDR RFH F+DG
Sbjct: 608 SEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDG 667
Query: 598 TCSCRDYW 605
CSC DYW
Sbjct: 668 VCSCCDYW 675
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 170/323 (52%), Gaps = 41/323 (12%)
Query: 69 LVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
L+ C +S H+ + YA S+F I EP +NT++RG + AL +Y M G
Sbjct: 1 LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH 60
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY----------- 176
P++++FP L K+CAK +A +EG QIH V K+G D +V SLI+MY
Sbjct: 61 LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120
Query: 177 ------------------GKCEKVEFASA--IFKQMDQKSVASWSAIIAAHASNGLWSEC 216
G + +F SA +F ++ ++ V SW+A+I + NG + E
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI------SALNVIV 270
L+LF EM RP+E LVSV+SAC G+++LG+ H + + S+L ++
Sbjct: 181 LELFKEMMRTNV-RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIV- 238
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LID+Y KCG +E LF ++ K ++++ +I G KEAL +F EMLR G
Sbjct: 239 -NALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGE 297
Query: 331 EPDDVVYVGVLSACSHAGLVNEG 353
P+DV + VL AC+H G ++ G
Sbjct: 298 CPNDVTLLSVLPACAHLGAIDIG 320
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 132/317 (41%), Gaps = 44/317 (13%)
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+ + +A ++F+ + + ++ W+ ++ HAS+ L+++ M + P +
Sbjct: 12 DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPFL 70
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM------ 293
L +C A + G+ H +++ L+ V TSLI MY + G LE +F
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 294 -------------------------MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ ++ ++++ MI+G +G+ +EAL +F EM+R
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGM 385
+ PD+ V V+SAC+ +G + G ++ +++ ++DL + G
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
+ A L + + + DVV + L H NL + + P+D LLS +
Sbjct: 251 VETAFGLFEGLSCK--DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVL 308
Query: 446 YARAQ-------RWYDV 455
A A RW V
Sbjct: 309 PACAHLGAIDIGRWIHV 325
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/607 (39%), Positives = 357/607 (58%), Gaps = 42/607 (6%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA-LSHWGSMDYACSIFRQIDEPGA 96
+ C+++ + ++ H+ +++ G + L+ CA S ++ YA +F I +P A
Sbjct: 29 FEKCQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDA 88
Query: 97 FDFNTLIRGFVKE--VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
F +NT+I+GF+ + L LY+ M + V P+NFTFP+L AC K+Q GMQIH
Sbjct: 89 FLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQ---HGMQIH 145
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFAS---------------------------- 186
H+FK GF NSLI+MY + +E A
Sbjct: 146 AHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLID 205
Query: 187 ---AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
IF+ M QK+ ASW+A++AA+ + E LF M E ++ + ++LSAC
Sbjct: 206 EAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSAC 265
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL--T 301
T LGALD GK H + RN L+ + T+++DMY KCGCLEK L +F + C+ +
Sbjct: 266 TGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISS 325
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ MI GLAMHG G+ A+ +F EM R+ + PDD+ ++ +L+AC+H+GLV EG F M
Sbjct: 326 WNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMI 385
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
Y I P ++H+GC+VDL+GRAGM+ EA +LI MP+ + V +LL A K H N+E+G
Sbjct: 386 RVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELG 445
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E + + ++ ++ YVLL+N+YA A +W D AK+R M +G+ ++PGFS++E+
Sbjct: 446 EEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGT 505
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL--RDVDEDEKRER-LKGHS 538
V++F++ +R+HP ++ +++M LK GY D + VL D DE+E E L HS
Sbjct: 506 VHEFIAGERNHPQAKELHAKVYEMLEHLKSVGYVADTNGVLHGHDFDEEEDGENPLYYHS 565
Query: 539 QKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+KLAIAF L G +RI +NLR+C DCH KLIS +++REIIVRDR RFHRFK G
Sbjct: 566 EKLAIAFGLSRTKPGETLRILKNLRICEDCHHACKLISTVFDREIIVRDRTRFHRFKMGQ 625
Query: 599 CSCRDYW 605
CSC+DYW
Sbjct: 626 CSCQDYW 632
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 33/258 (12%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV------------------------- 70
++L C+ ++ ++HAH+ K+GF + C ++L+
Sbjct: 130 SLLIACRKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSV 189
Query: 71 ----ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FER 125
S WG +D A +IF+ + + + +N ++ +V+ F EA L++ M E
Sbjct: 190 SWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAEN 249
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
D F + AC L AL +G IH ++ + G E D + ++++MY KC +E A
Sbjct: 250 NNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKA 309
Query: 186 SAIFKQMDQ--KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
+F + + ++SW+ +I A +G ++LF EM ++ P++ +++L+AC
Sbjct: 310 LQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRV-APDDITFLNLLTAC 368
Query: 244 THLGALDLGKCTHGSLIR 261
H G ++ G+ +IR
Sbjct: 369 AHSGLVEEGRNYFSYMIR 386
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/605 (39%), Positives = 351/605 (58%), Gaps = 36/605 (5%)
Query: 36 TILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCA------------------ 74
+I K+C + E K+VHAHVLK G N F ++L+ A
Sbjct: 133 SIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMR 192
Query: 75 -----------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
+ G +D A +F +I +N +I G+ + EEA+ + EM
Sbjct: 193 DAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR 252
Query: 124 ERGVEPDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
V P+ T ++ ACA+ +L+ G + + G ++ + N LI+MY KC +
Sbjct: 253 RAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDL 312
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E AS +F+++ K+V SW+ +I + + E L LF M P + +S+L A
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNI-DPNDVTFLSILPA 371
Query: 243 CTHLGALDLGKCTHGSLIRNISAL--NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
C +LGALDLGK H + +N+ ++ V + TSLIDMY KCG L +F M K
Sbjct: 372 CANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA 431
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
T++ MISG AMHG AL +FS M EG PDD+ +VGVL+AC HAGL++ G F M
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+Y++ P + HYGC++DL GRAG+ EA L+++M ++ + +W SLL A ++H +E+
Sbjct: 492 IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIEL 551
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
E AK+LF++ +PS YVLLSN+YA A RW DVAKIRT + + + PG S +EV
Sbjct: 552 AESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDS 611
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
V++F+ D+ HP + IY+M+ +++ +L+ G+ PD S+VL D+DE+ K L HS+K
Sbjct: 612 VVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEK 671
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF LI G+ IRI +NLR+C +CH+ TKLIS I+ REII RDR RFH FKDG+CS
Sbjct: 672 LAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCS 731
Query: 601 CRDYW 605
C+DYW
Sbjct: 732 CKDYW 736
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 214/440 (48%), Gaps = 41/440 (9%)
Query: 9 QSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
Q L + P P K + + LT+L CK L+ K++H+ ++K G F S
Sbjct: 12 QVLSFSDPSPPYK------LVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSK 65
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
L+ CA+S G + YA S+F+ I P +N +IRG AL Y M G E
Sbjct: 66 LIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTE 125
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC--------- 179
P+ +TFP++FK+C K++ EG Q+H HV K+G E + FV SLINMY +
Sbjct: 126 PNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLV 185
Query: 180 -------EKVEFASAI---------------FKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ V F + I F ++ + V SW+A+I+ +A +G E +
Sbjct: 186 FDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAM 245
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLID 276
F EM K P S ++SVLSAC G +L LG + N+ + LID
Sbjct: 246 AFFEEMRRAKV-TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLID 304
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MYVKCG LE+ LF + DK ++++VMI G KEAL +F M++ ++P+DV
Sbjct: 305 MYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVT 364
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP-TVQHYGCVVDLMGRAGMLGEALELIQS 395
++ +L AC++ G ++ G + + + TV + ++D+ + G L A +
Sbjct: 365 FLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDC 424
Query: 396 MPIQQNDVVWRSLLSASKVH 415
M ++ W +++S +H
Sbjct: 425 MN-TKSLATWNAMISGFAMH 443
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/584 (41%), Positives = 352/584 (60%), Gaps = 14/584 (2%)
Query: 32 QECLTILK---TCKNLEEFKKVHAHVLKWGF-FWNPFCASNLVATCALSHWGSMDYACSI 87
+ C+ +L+ +L K++HA L+ G +P A +L+ A + YA ++
Sbjct: 13 RHCVALLRLHLAAPSLAAAKQIHARALRAGVPTSHPLLAKHLLFHLAALRAPPLRYAVAV 72
Query: 88 FRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++ G D NT++R AL L+ R PD T+P L +ACA+L
Sbjct: 73 LSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRR---RLALPDTHTYPPLIQACARL 129
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSA 202
AL+EG +H K GF +FVQNSL+++YG C E A +F +M +++ SW++
Sbjct: 130 LALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNLVSWNS 189
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ + A+NG +E L +F EM + P+ +VSVL+AC GAL LG+ H + +
Sbjct: 190 MLNSFAANGRPNEVLTVFWEMLGVD-FAPDGFTIVSVLTACAEFGALALGRRVHVYVEKV 248
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSI 321
N V +LID+Y KCG + +F M + ++++ +I GLA +G GKEAL +
Sbjct: 249 GLVENSHVSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFGKEALEL 308
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
FS M RE L P ++ VGVL ACSH GLV++G FDRMK +Y I P ++H GC+VDL+G
Sbjct: 309 FSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLG 368
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG + EA + I +MP++ N VVWR+LL + +H LE+G++A + L +++ H DYVL
Sbjct: 369 RAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVL 428
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA W DV +R M + ++PG SLVE+ VY+FV DRSHP + IYEM
Sbjct: 429 LSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSLVELRNSVYEFVMGDRSHPESEQIYEM 488
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ +L+ EGY P S VL D++E+EK L HS++LAIAFAL+ G PIRI +N
Sbjct: 489 LAEIAERLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGIPIRIIKN 548
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LRMC DCH LIS +Y+REIIVRDR RFH F+ G CSC+DYW
Sbjct: 549 LRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQGGACSCKDYW 592
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/583 (41%), Positives = 359/583 (61%), Gaps = 17/583 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIFRQI 91
L L +C + + K++HA ++ +P F S ++ +L + YA +F QI
Sbjct: 30 LLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLH---DLRYAFRVFHQI 86
Query: 92 DEPGAFDFNTLIRGFVKEVEFEE-ALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
+ P +F +N LIR + + ++ A+ LY+ M E+G V D TFP + KACA L AL E
Sbjct: 87 ENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSE 146
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G QIH + K+GF+ D+++ NSL++ Y C++++FA +F +M ++S+ SW+ +I A
Sbjct: 147 GEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVR 206
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA---L 266
G + L LFGEM +K + P+ + S+ +AC +G+L LG H L++ A
Sbjct: 207 FGEFDAALNLFGEM--QKFFEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVN 264
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V++ TSL+DMY KCG LE L LF M + +++ MI G + HG+ AL F M+
Sbjct: 265 DVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMV 324
Query: 327 R-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
R E L P+ + +VGVLSAC+H GLV+EG FD M EY+I P ++HYGC+VDL+ RAG+
Sbjct: 325 RTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGL 384
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD-YVLLS 443
+ EAL+++ +MP++ + V+WRSLL A K + +E+ E A+ + + S YVLLS
Sbjct: 385 IDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLS 444
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
+YA A RW DV +R M KG+ + PG S +E+ ++F + D SHP + IY +
Sbjct: 445 RVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALD 504
Query: 504 QMEWQLKFEGYSPDISQV-LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+E +++ GYSPD SQ + D D K+ L+ HS++LAIAF L+ G PIRI +NL
Sbjct: 505 VIEERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNL 564
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+CN+CH TKLIS ++ REIIVRDR RFH FKDG CSC DYW
Sbjct: 565 RVCNNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 607
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/592 (41%), Positives = 359/592 (60%), Gaps = 12/592 (2%)
Query: 23 PELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
P R EQ CL +L+ + A +LK G NP + L A+ A + ++
Sbjct: 19 PPSAARAAEQHCLHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASSAAAAPALLE 78
Query: 83 YACSIFRQIDEP-GAFDFNTLIRGF----VKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+ + P AF NTLIR + A F + M V P+ FTFP L
Sbjct: 79 PLVAALLRPSVPIDAFLVNTLIRAHAASPLPSARLRAAAF-FPLMLRSAVLPNKFTFPFL 137
Query: 138 FKACAKLQALKE-GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF---ASAIFKQMD 193
KACA L G+Q H K GF D +V N+LI+MY C EF A +F +MD
Sbjct: 138 LKACAALPGFPGVGLQAHAAALKFGFATDQYVSNTLIHMY-SCFGGEFLGDARNVFDRMD 196
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ SV +WSA+I + GL S+ + LF EM RP+E ++ VL+A LGAL+L +
Sbjct: 197 KSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGV-RPDEVTVIGVLAAAADLGALELAR 255
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
+ R +V + +LID KCG ++ + +F+ M ++ ++++ +I LAM G
Sbjct: 256 WVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEG 315
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+GKEA+++F M G+ PDDVV++GVL+ACSHAG+V+EG FD MK+EY I P ++HY
Sbjct: 316 RGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHY 375
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
GC+VD+ GRAGM+ A+E I +MP++ N ++WR+L++A + H LE+GE +NL
Sbjct: 376 GCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYP 435
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
H ++YV+LSN+YA QRW + ++IR EM+ +G+ + PG SLVE+ +V++F++ D SHP
Sbjct: 436 AHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHP 495
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
W IY M+ +M +LK G+ S+VL D+DE++K L+ HS+KLAIAF L+ G
Sbjct: 496 QWKEIYMMVEEMARELKHVGHISATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPG 555
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +R+ +NLR+C+DCH K IS++Y REIIVRDR RFHRFK+G+CSC D+W
Sbjct: 556 TQVRVVKNLRVCSDCHAAIKCISLVYNREIIVRDRSRFHRFKNGSCSCNDFW 607
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/619 (38%), Positives = 361/619 (58%), Gaps = 53/619 (8%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS--HWGSMDYACSIFRQIDEPG 95
+ C+ + + ++HA +K G + A+ ++ CA S H +DYA IF Q+ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 96 AFDFNTLIRGFVKEVEFEEAL----FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
F +NT+IRGF E + ++AL Y M + VEP+ FTFP++ KACAK ++EG
Sbjct: 90 CFSWNTIIRGF-SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKC-----EKVEF---------------------- 184
QIHG K GF D FV ++L+ MY C +V F
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 185 ------------------ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
A +F +M Q+SV SW+ +I+ ++ NG + + +++F EM
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
RP LVSVL A + LG+L+LG+ H + ++ ++ ++LIDMY KCG +EK
Sbjct: 269 DI-RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+ +F + + +T+S MI+G A+HGQ +A+ F +M + G+ P DV Y+ +L+ACSH
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
GLV EG F +M + P ++HYGC+VDL+GR+G+L EA E I +MPI+ +DV+W+
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LL A ++ N+E+G+ A L + H YV LSNMYA W +V+++R M K
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + PG SL+++ +++FV +D SHP I M+ ++ +L+ GY P +QVL +++
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 567
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E++K L HS+K+A AF LI S G PIRI +NLR+C DCH+ KLIS +Y+R+I VR
Sbjct: 568 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 627
Query: 587 DRKRFHRFKDGTCSCRDYW 605
DRKRFH F+DG+CSC DYW
Sbjct: 628 DRKRFHHFQDGSCSCMDYW 646
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 55/331 (16%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE----KVEFASAIFKQM 192
LF + +++ QIH K G D ++ + +++A IF QM
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 193 DQKSVASWSAIIAAHASNGLWSE--CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
Q++ SW+ II + + + LF EM +++ P SVL AC G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF------------------- 291
GK HG ++ + V ++L+ MYV CG ++ LF
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 292 ----------------------RMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEM 325
RM+ DK + ++++ MISG +++G K+A+ +F EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+ + P+ V V VL A S G + G L RI + ++D+ + G
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCG 323
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ +A+ + + +P ++N + W ++++ +H
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/563 (40%), Positives = 346/563 (61%), Gaps = 6/563 (1%)
Query: 47 FKKVHAHVLKWGFFWN--PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+++HAH+L + F S +VA CALS +G+++YA S+F QI P F +N+LI+
Sbjct: 4 LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIK 63
Query: 105 GFVK-EVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
G+ + +E +FL+ ++ E G P++FT + KACA + A EG+Q+H HV K GF
Sbjct: 64 GYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGF 123
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
LFVQ SL+N YGKCE++ FA +F++M +++ +W+A+I+ HA G E ++LF E
Sbjct: 124 GSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFRE 183
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M +P+ LVSV+SAC GALD+G H + + ++ + T+L+DMY KCG
Sbjct: 184 MQKAGI-QPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCG 242
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
C+E+ +F M K +S MI G A HG ++A+ F +ML + PD V ++ VLS
Sbjct: 243 CIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLS 302
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
AC+H GLV+ G F + LE+ I P+V+HYGC VDL+ R+G++ EA + +M I N
Sbjct: 303 ACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNA 361
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
WRSLL K L +GEI A+ L ++ + +Y+++SN+Y+ +W ++++R M
Sbjct: 362 ATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVM 421
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
K + PG S +EV V++FV D+SHP + E + +M +++ GY P IS VL
Sbjct: 422 KEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDVL 481
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
V ++EK L HS++ AIA+ L+ IR+ +NLR+C DCH K+IS +YERE
Sbjct: 482 HKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYERE 541
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRDR RFH+F GTCSC+D+W
Sbjct: 542 IIVRDRVRFHKFIKGTCSCKDFW 564
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/566 (41%), Positives = 350/566 (61%), Gaps = 8/566 (1%)
Query: 32 QECLTILKT--CKNLEEFKKVHAHVLKWGF-FWNPFCASNLV-ATCALSHWGSMDYACSI 87
++C+ +L+T ++ + +++HA ++ G + +L+ +L M YA +
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 88 FRQIDEP-GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQ 145
F +I++P F +NTLIRG+ + A LY EM G VEPD T+P L KA +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
++ G IH V + GF ++VQNSL+++Y C V A +F +M +K + +W+++I
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG E L L+ EMN+ K +P+ +VS+LSAC +GAL LGK H +I+
Sbjct: 196 GFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N+ L+D+Y +CG +E+ LF M DK ++++ +I GLA++G GKEA+ +F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 326 -LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
EGL P ++ +VG+L ACSH G+V EG F RM+ EY+I P ++H+GC+VDL+ RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ +A E I+SMP+Q N V+WR+LL A VH + ++ E A + Q+ +H DYVLLSN
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 434
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
MYA QRW DV KIR +M G+ + PG SLVEV +V++F+ D+SHP D IY + +
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M +L+ EGY P IS V DV+E+EK + HS+K+AIAF LI + SPI + +NLR+
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 554
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKR 590
C DCH KL+S +Y REI+VRDR R
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRSR 580
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/595 (40%), Positives = 361/595 (60%), Gaps = 17/595 (2%)
Query: 24 ELNLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
+L+L+ +K+C +L ++ H L +GF + F +S LV S G
Sbjct: 145 KLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDM--YSKCGE 202
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDN------F 132
+ A ++F +I + ++I G+V+ + AL L+ E E G E D
Sbjct: 203 LRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPI 262
Query: 133 TFPALFKACAKL--QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
++ AC+++ +++ EG +HG + K GFE DL V+N+L++ Y KC ++ + +F
Sbjct: 263 AMVSVLSACSRVSEKSITEG--VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFD 320
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
M ++ V SW++IIA +A NG+ +E +++F M + L +VL AC H G+
Sbjct: 321 GMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQR 380
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
LGKC H +I+ NV V TS+IDMY KCG +E F M +K ++S M++G
Sbjct: 381 LGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 440
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
MHG KEAL +F EM G++P+ + +V VL+ACSHAGL+ EG F M E+ + P V
Sbjct: 441 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGV 500
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HYGC+VDL+GRAG L EA +LI+ M ++ + VVW +LL A ++H N+++GEI+A+ LF+
Sbjct: 501 EHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFE 560
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
++ + YVLLSN+YA A RW DV ++R M + GL + PGFSLV++ +V+ F+ DR
Sbjct: 561 LDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDR 620
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
HP + IYE + ++ +L+ GY PD++ VL DV +EK L+ HS+KLA+AF +++
Sbjct: 621 EHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNT 680
Query: 551 SQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+ I I +NLR+C DCHT K IS I +REI+VRD KRFH F+DG CSC DYW
Sbjct: 681 VPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 171/340 (50%), Gaps = 20/340 (5%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ +D+ F +N++I + + EAL ++ M + ++P+ TFP K+C+ L L
Sbjct: 110 KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q H GFE DLFV ++L++MY KC ++ A +F ++ +++ SW+++I +
Sbjct: 170 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 229
Query: 209 SNGLWSECLKLFGEM---------NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
N L LF E + E C P +VSVLSAC+ + + + HG L
Sbjct: 230 QNDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGVHGFL 287
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+ ++ VE +L+D Y KCG L +F MA++ ++++ +I+ A +G E++
Sbjct: 288 IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347
Query: 320 SIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGC 375
IF M+++G + + V VL AC+H+G G D +M LE +
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS---- 403
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++D+ + G + A + M ++N W ++++ +H
Sbjct: 404 IIDMYCKCGKVEMARKAFDRMR-EKNVKSWSAMVAGYGMH 442
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/573 (39%), Positives = 351/573 (61%), Gaps = 3/573 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDE 93
L+ L C +L+E K++ A +K + + L+ +C + SMDYA +F I +
Sbjct: 30 LSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQ 89
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P FN++ RG+ + +A+ L+ + + PD++TFP+L KAC +A ++G Q+
Sbjct: 90 PDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQL 149
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K+G + +V +LINMY C V+ A +F ++ + V S++AII +A +
Sbjct: 150 HCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRP 209
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+E L LF ++ K +P + ++SVLS+C LGALDLGK H + +N V V T+
Sbjct: 210 NEALSLFRQLQARK-LKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTA 268
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG L+ + +F M+ + +S MI AMHGQG++ +S+F EM R ++PD
Sbjct: 269 LIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPD 328
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++ ++G+L ACSH GLV+EG F M Y I+P ++HYGC+VDL+GRAG+L EA + I
Sbjct: 329 EITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFI 388
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+PI+ ++WR+LLS+ H NLE+ + + +++ H DYV+LSN+ ARA +W
Sbjct: 389 DELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWE 448
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
DV +R M KG + PG S +EV V++F S D H ++ + ++ +LK G
Sbjct: 449 DVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVKELKSVG 508
Query: 514 YSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
Y PD S V+ D++++EK L+ HS+KLAI+F L++ G+ IR+ +NLR+C DCH+
Sbjct: 509 YVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCGDCHSAA 568
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS + +REII+RD +RFH FKDG CSC DYW
Sbjct: 569 KLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 139/289 (48%), Gaps = 7/289 (2%)
Query: 131 NFTFPALFKAC-AKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN---MYGKCEKVEFAS 186
N T+P+ +C K +LKE QI K + DL + LIN +++A
Sbjct: 22 NTTYPSSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAH 81
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F+ + Q + ++++ ++ + + + LF + N P++ S+L AC
Sbjct: 82 QLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLL-PDDYTFPSLLKACVVA 140
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
A GK H I+ N V +LI+MY C ++ +F + + C ++Y+ +I
Sbjct: 141 KAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAII 200
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+G A + EALS+F ++ L+P+DV + VLS+C+ G ++ G + +K + +
Sbjct: 201 TGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVK-KNGL 259
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V+ ++D+ + G L A+ + +SM ++ W +++ A +H
Sbjct: 260 DKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQ-AWSAMIVAYAMH 307
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/603 (39%), Positives = 360/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K +E +++H HVLK G+ + F ++L++
Sbjct: 140 LLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRD 199
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T + + S Y A +F +I +N +I G+ + ++EAL L+ EM +
Sbjct: 200 VVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK 259
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ PD T + ACA+ +++ G Q+H + GF +L + NSL+++Y KC ++E
Sbjct: 260 TNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELET 319
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I + L+ E L LF EM RP + ++S+L AC
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ERPNDVTMLSILPACA 378
Query: 245 HLGALDLGKCTHGSLIRNI-SALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + SA N + TSLIDMY KCG +E +F + K ++
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A IFS M + G+EPDD+ +VG+LSACS +G+++ G F M
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQ 498
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y+I P ++HYGC++DL+G +G+ EA E+I +M ++ + V+W SLL A K+ N+E+GE
Sbjct: 499 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGE 558
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW +VAKIR + KG+ + PG S +E+ V
Sbjct: 559 SFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 603 DYW 605
DYW
Sbjct: 739 DYW 741
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 197/374 (52%), Gaps = 38/374 (10%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L +PP L+ L++L CK L+ + +HA ++K G + S L+
Sbjct: 19 FLPSSSDPPYD-----SLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLE 73
Query: 72 TCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
C +S H+ + YA S+F I EP +NT+ RG + AL LY M G+ P+
Sbjct: 74 LCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY---GKCEK------ 181
++TFP L K+CAK +A KEG QIHGHV K+G++ DLFV SLI++Y G+ E
Sbjct: 134 SYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFD 193
Query: 182 ----------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+E A +F ++ K V SW+A+I+ +A G + E L+L
Sbjct: 194 RSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F EM RP+ES +V+V+SAC G+++LG+ H + + N+ + SL+D+Y
Sbjct: 254 FKEMMKTNI-RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYS 312
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG LE LF + K ++++ +I G KEAL +F EMLR G P+DV +
Sbjct: 313 KCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLS 372
Query: 340 VLSACSHAGLVNEG 353
+L AC+H G ++ G
Sbjct: 373 ILPACAHLGAIDIG 386
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 51/338 (15%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
N+R E +T++ C ++E ++VH+ + GF N ++L+ S G ++
Sbjct: 261 NIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDL--YSKCGELE 318
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
AC +F + +NTLI G+ ++EAL L+ EM G P++ T ++ ACA
Sbjct: 319 TACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACA 378
Query: 143 KLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
L A+ G IH ++ K ++ SLI+MY KC +E A +F + KS++SW
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A+I A +G +F M P++ V +LSAC+ G LDLG+
Sbjct: 439 NAMIFGFAMHGRADAAFDIFSRMRKIGI-EPDDITFVGLLSACSRSGMLDLGR------- 490
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQG 315
+FR M ++T Y MI L G
Sbjct: 491 ----------------------------HIFRTMTQDYKITPKLEHYGCMIDLLGHSGLF 522
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
KEA + + M +EPD V++ +L AC G V G
Sbjct: 523 KEAEEMINNM---EMEPDGVIWCSLLKACKIRGNVELG 557
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 236/603 (39%), Positives = 362/603 (60%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K L E +++H HVLK G+ + + ++L++
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + S Y A +F +I +N +I G+V+ F+EAL LY +M +
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V+PD T + ACA+ +++ G Q+H + GF ++ + N LI++Y KC +VE
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + +K V SW+ +I H L+ E L LF EM P + ++SVL AC
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSG-ESPNDVTMLSVLPACA 309
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + TSLIDMY KCG +E +F M + ++
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A +FS+M + G++PDD+ +VG+LSACSH+G+++ G F M
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y+I P ++HYGC++DL+G G+ EA E+I++MP++ + V+W SLL A K+H+N+E+GE
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGE 489
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW VAKIRT + KG+ ++PG S +E+ V
Sbjct: 490 SYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVV 549
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME ++ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 550 HEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 609
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR R H KDG SC
Sbjct: 610 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCH 669
Query: 603 DYW 605
DYW
Sbjct: 670 DYW 672
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 192/370 (51%), Gaps = 32/370 (8%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
H+ + YA SIF I EP +NT+ RG + AL LY M G+ P++++FP
Sbjct: 11 HFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPF 70
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L K+CAK +AL EG QIHGHV K+G++ D++V SLI+MY + ++E A +F + +
Sbjct: 71 LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKC--W------------------------- 229
V S++A+I +AS G + KLF E++ + W
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190
Query: 230 ---RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+P+ES +V+V+SAC G+++LG+ H + + N+ + LID+Y KCG +E
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
LF+ +A K ++++ +I G KEAL +F EMLR G P+DV + VL AC+H
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 310
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQH-YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
G ++ G + + V ++D+ + G + A ++ SM + ++ W
Sbjct: 311 LGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSM-LTRSLSSW 369
Query: 406 RSLLSASKVH 415
+++ +H
Sbjct: 370 NAMIFGFAMH 379
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 151/330 (45%), Gaps = 53/330 (16%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
N++ E +T++ C ++E +++H+ + GF N + L+ S G ++
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDL--YSKCGEVE 249
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
AC +F+ + + +NTLI G ++EAL L+ EM G P++ T ++ ACA
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309
Query: 143 KLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
L A+ G IH ++ K G + SLI+MY KC +E A +F M +S++SW
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A+I A +G + LF +M P++ V +LSAC+H G LDLG+
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRKNGI-DPDDITFVGLLSACSHSGMLDLGR------- 421
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQG 315
+FR M+ ++T Y MI L G
Sbjct: 422 ----------------------------HIFRSMSQDYKITPKLEHYGCMIDLLGHCGLF 453
Query: 316 KEALSIFSEMLRE-GLEPDDVVYVGVLSAC 344
KEA EM+R +EPD V++ +L AC
Sbjct: 454 KEA----KEMIRTMPMEPDGVIWCSLLKAC 479
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/611 (39%), Positives = 367/611 (60%), Gaps = 44/611 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQIDE 93
+++L CK+L E +++HA ++K + F S L+A C+LS G +DYA S+F +I
Sbjct: 10 VSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQH 69
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEM-----FERGVEPDNFTFPALFKACAKLQALK 148
P +F F LI+GF E+L LY M + GVE F+ P++ KAC KL A
Sbjct: 70 PNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAFD 126
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMY---GKCE------------------------- 180
EG Q+HG V K D FV NS++ MY G+ E
Sbjct: 127 EGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYL 186
Query: 181 ---KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
++E A +F+ M K V +W+++I+A+ N + L LF EM + RP+ +V
Sbjct: 187 KAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGL-RPDGPAIV 245
Query: 238 SVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
SVLSA LG ++ GK H + N I + + ++LIDMY KCG +E +FR ++
Sbjct: 246 SVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISH 305
Query: 297 KCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ + ++ MISGLA+HG +EAL IF EM R +EP+++ ++G+LS CSH GLV EG
Sbjct: 306 RRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQF 365
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+ M +Y+IVP +QHYGC++DL GRAG L +AL +IQ+MP + + + W+++LSAS H
Sbjct: 366 YFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKH 425
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
++EIG+ AA ++ S YVLLSN+YA+A RW DVAKIR M +G+ + G S
Sbjct: 426 GHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSS 485
Query: 476 VEVARKVYKFVSQDRSHPAWDN-IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+ V KV++F+ ++ + I ++ +LK +GY PD++QVL D++++ K L
Sbjct: 486 MLVNGKVHEFLLGKELDSSYSGQVLAKIAEVVSRLKLQGYEPDLTQVLLDIEDEGKESLL 545
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+K+AIAF LIH+++ +PI I +NLR+C DCH + KL+S +Y R+II+RD+ RFH F
Sbjct: 546 NLHSEKMAIAFGLIHINKSAPIHIVKNLRVCCDCHCFMKLVSKVYNRQIIMRDQNRFHHF 605
Query: 595 KDGTCSCRDYW 605
++G CSC +YW
Sbjct: 606 ENGCCSCNEYW 616
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/590 (38%), Positives = 355/590 (60%), Gaps = 32/590 (5%)
Query: 46 EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
E K++HAH+LK + S + + CA + S YA IF+ +D +NT +R
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFN--SSFSYAKLIFQLLDASEVTHWNTCLRS 87
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
F + +A+ L+ + E + PD++T + KAC++L ++ G +HG+V K+G + +
Sbjct: 88 FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-- 223
+F+QN ++++Y C ++ A +F +M Q+ V +W+ +IA G KLF EM
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 224 NNEKCWR----------------------------PEESILVSVLSACTHLGALDLGKCT 255
N + W P E +V+VL AC +G L LG+
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H R+ N+ V +LIDMYVKCGCLE +F M ++ +++S MI+GLA HG+
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
++AL++F++M+ G++P+ V ++G+L ACSH G+V +G F M +Y IVP ++HYGC
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL RAG+L EA E I +MPI N VVW +LL KVH N+++ E A ++L +++ +
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLN 447
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YV+LSN+YA A RW DVA++R M +G+ ++PG+S + V VY FV+ D +HP
Sbjct: 448 DGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQT 507
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ I++ ++ ++K +GY P+ S VL D++ED+K + L HS+KLA+ F LI + G+
Sbjct: 508 EEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTV 567
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCH K+ISV+ REI+VRDR RFH FK+G+CSC DYW
Sbjct: 568 IRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 243/640 (37%), Positives = 364/640 (56%), Gaps = 66/640 (10%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E CL++L CK+L FK++HA+VLK G +PF A L+ CA+S S+DYAC +FR
Sbjct: 5 EPLCLSLLNICKSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRY 64
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-DNFTFPALFKACAKLQALKE 149
P F NTLIRG + +++L + EM P D+F+F + KA A L++++
Sbjct: 65 TPNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRV 124
Query: 150 GMQ------IHG---HVFK-------------VGFECDLFVQ------------------ 169
G+Q +HG H+F VGF +F +
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184
Query: 170 ----------------------NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
N ++ Y K ++E A +F +M K SWS +I
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGF 244
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A NG + E F E+ K RP E+ L VLSAC GAL+ GK HG + ++ A
Sbjct: 245 AHNGYFEEAFSFFRELQ-RKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWI 303
Query: 268 VIVETSLIDMYVKCG-CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V V +L+D Y KCG L L R+M ++ ++++ M++ LAMHG G+EA+ IF +M
Sbjct: 304 VSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKME 363
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ PD++ ++ +L ACSHAGLV +G FD+MK Y I P+++HYGC+VDL GRAG L
Sbjct: 364 ESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQL 423
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
+A E + MPI ++WR+LL A +H ++++ E + L +++ ++ SD+VLLSN Y
Sbjct: 424 QKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAY 483
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A A +W D A +R M + + ++PG+S++EV + +Y F++ + + + Y+ + ++
Sbjct: 484 AVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEII 543
Query: 507 WQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+L+ E GY P+I +VL D++E+EK + HS+KLA+AF + L +G IRI +NLR+C
Sbjct: 544 RRLRVEGGYVPEIGRVLHDIEEEEKEGSVSVHSEKLAVAFGIARLCKGRTIRIVKNLRIC 603
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH KLIS IY+ EI+VRDR RFH FKDG CSCRDYW
Sbjct: 604 RDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 26 NLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+R E +L C LE K +H + K G W + L+ T S G++
Sbjct: 264 GMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDT--YSKCGNVL 321
Query: 83 YACSIFRQI-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
A +F +I +E + +++ EEA+ ++++M E G+ PD F +L AC
Sbjct: 322 MAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYAC 381
Query: 142 AKLQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA-S 199
+ +++G + + + E + ++++YG+ +++ A QM A
Sbjct: 382 SHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAII 441
Query: 200 WSAIIAAHASNG 211
W ++ A + +G
Sbjct: 442 WRTLLGACSMHG 453
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/564 (40%), Positives = 338/564 (59%), Gaps = 34/564 (6%)
Query: 76 SHWGSMDYACSIFRQ-IDEPGAFDFNTLIRGFVKEVEFEEALFLYNE--MFERGVEPDNF 132
S G++ ++ IF + P F +N L++ F + + + +N + PD +
Sbjct: 69 SSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEY 128
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY---------------- 176
TF ++ KACA L + EG ++H V K G E +LFV+NSL+++Y
Sbjct: 129 TFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM 188
Query: 177 -------------GKC--EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
G C V+ A +F M +K++ SWS +I+ +A N +++ ++LF
Sbjct: 189 VVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFR 248
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M +E P + LVSVLSAC HLGALDLGK H + RN + + + +L DMY KC
Sbjct: 249 QMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC 308
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
GC+ + +F M ++ +++S++I GLAM+G EA + F+EM+ +GLEP+D+ ++G+L
Sbjct: 309 GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLL 368
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+AC+HAGLV++GL FD M Y I P ++HYGCVVDL+ RAG L +A LI SMP+Q N
Sbjct: 369 TACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN 428
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+VW +LL +++ + E GE + +++S+H V L+N+YA R D A R
Sbjct: 429 VIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLR 488
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M ++PG S +E+ VY+F D SHP IY MI +++W++K GY P V
Sbjct: 489 MRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLV 548
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
+ ++DE+EK + L HS+KLA+AF LI+ S+G+ IRI +NLR+CNDCH K+IS I ER
Sbjct: 549 IHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVER 608
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRDR RFH FKDG CSC DYW
Sbjct: 609 EIVVRDRSRFHHFKDGKCSCNDYW 632
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/638 (37%), Positives = 362/638 (56%), Gaps = 65/638 (10%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC-ALSHWGSMDYACSIFRQ 90
++ +++L+ L + ++HA ++K N F + L+ A S + YA S+F +
Sbjct: 4 KKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDE 63
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-DNFTFPALFKACAKLQALKE 149
I P F +NT+IR ++ +E++ L+ +M + P D+++ + +AC +L+
Sbjct: 64 IPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGN 123
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYG-------------------------------K 178
G ++H V K+G DLFV+ +LI MY +
Sbjct: 124 GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR 183
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNG------------------LWS------ 214
++ A +F +M ++ + SW+ +I HAS G WS
Sbjct: 184 VGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAY 243
Query: 215 -------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
E L+LF EM P++ +VSVLSAC +GAL +GK H + RN ++
Sbjct: 244 AKARQSNEALRLFHEMQLANVL-PDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEID 302
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ + TSL+DMY KCG ++ L +F M ++ +S MI GLA HG G+ AL FS+M+
Sbjct: 303 LKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMIS 362
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
E ++P+DV ++GVLSACSH GLV+EG F M Y + P ++HYGCVVD++GRAG L
Sbjct: 363 EDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQ 422
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA+ELI+SMP + +VWR+LL A +++ N+EI E A NL ++ H +YVLLSN+Y+
Sbjct: 423 EAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYS 482
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+A+ W V +R M + + + PG S +EV V++FV+ D+SHP I M+ ++
Sbjct: 483 QAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITA 542
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
+LK GY+P + VL+D DE EK L HS+KLAIAF L+ + GS IRI +NLR+C+D
Sbjct: 543 RLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLLSTAPGSTIRIVKNLRVCDD 602
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH KLIS Y+R IIVRDR RFH F +G+CSC+DYW
Sbjct: 603 CHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/604 (39%), Positives = 350/604 (57%), Gaps = 36/604 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA------------------- 74
+LK+C K EE +++HA V+K G + + ++L++ A
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 75 ----------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
+ G + A +F I E +N +I G+V+ +EEAL L+ EM
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVE 183
V PD T ++ ACA+ +++ G +IH V GF L + N+ I +Y KC VE
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
AS +F+ + K V SW+ +I + L+ E L LF EM P + ++SVL AC
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSG-ESPNDVTMLSVLPAC 327
Query: 244 THLGALDLGKCTHGSLIRNISALN--VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F M K +
Sbjct: 328 AHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSS 387
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ MI G AMHG+ A +FS M + G+EPDD+ VG+LSACSH+GL++ G F +
Sbjct: 388 WNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVT 447
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
+Y I P ++HYGC++DL+G AG+ EA E+I MP++ + V+W SLL A K+H NLE+
Sbjct: 448 QDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELA 507
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E A+ L +I + YVLLSN+YA A RW DVA+IR + KG+ + PG S +E+
Sbjct: 508 ESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSV 567
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V++F+ D+ HP IY M+ +M+ L+ G+ PD S+VL++++E+ K L+ HS+KL
Sbjct: 568 VHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 627
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
AIAF LI G+ + + +NLR+C +CH TKLIS IY+REI+ RDR RFH F+DG CSC
Sbjct: 628 AIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSC 687
Query: 602 RDYW 605
DYW
Sbjct: 688 CDYW 691
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 223/482 (46%), Gaps = 75/482 (15%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
HA ++K G + S L+ C +S H+ + YA S+F EP +NT++RG
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+ L +Y M G P+ +TFP L K+CAK + +EG QIH V K+G E D +
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQ-------------------------------KSV 197
SLI+MY + ++E A +F Q + V
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+A+I + N + E L+LF EM RP+E LVSVLSAC G+++LG+ H
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNV-RPDEGTLVSVLSACAQSGSIELGREIH- 238
Query: 258 SLIRN----ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
+L+ + S+L ++ + I +Y KCG +E LF ++ K ++++ +I G
Sbjct: 239 TLVDDHHGFGSSLKIV--NAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
KEAL +F EMLR G P+DV + VL AC+H G ++ G + + ++ R+
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR--WIHVYIDKRLKGVTNGS 354
Query: 374 G---CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF- 429
++D+ + G + A ++ SM + ++ W +++ +H AA +LF
Sbjct: 355 ALRTSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHGRAN----AAFDLFS 409
Query: 430 --QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
+ N P D L+ + A + L+++ R ++K V+
Sbjct: 410 RMRKNGIEPDDITLVGLLSACSHS----------------------GLLDLGRHIFKSVT 447
Query: 488 QD 489
QD
Sbjct: 448 QD 449
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/606 (39%), Positives = 350/606 (57%), Gaps = 37/606 (6%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA--------------------- 71
++ K+C K E K++HAH LK +P ++L+
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191
Query: 72 -----TCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
T ++ + G +D A +F +I +N +I G+V+ FEEAL + M
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
E V P+ T ++ AC L++L+ G I V GF +L + N+L++MY KC ++
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIG 311
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F M+ K V W+ +I + L+ E L LF M E P + ++VL AC
Sbjct: 312 TARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENV-TPNDVTFLAVLPAC 370
Query: 244 THLGALDLGKCTHGSLIRNISAL----NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
LGALDLGK H + +N+ NV + TS+I MY KCGC+E +FR M +
Sbjct: 371 ASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSL 430
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
+++ MISGLAM+G + AL +F EM+ EG +PDD+ +VGVLSAC+ AG V G F
Sbjct: 431 ASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSS 490
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M +Y I P +QHYGC++DL+ R+G EA L+ +M ++ + +W SLL+A ++H +E
Sbjct: 491 MNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
GE A+ LF++ + YVLLSN+YA A RW DVAKIRT++ KG+ + PG + +E+
Sbjct: 551 FGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEID 610
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
V++F+ D+ HP +NI+ M+ +++ L+ G+ PD S+VL D+DE+ K L HS+
Sbjct: 611 GVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSE 670
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLAIAF LI GS IRI +NLR+C +CH+ TKLIS I+ REII RDR RFH FKDG C
Sbjct: 671 KLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFC 730
Query: 600 SCRDYW 605
SC D W
Sbjct: 731 SCNDRW 736
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 162/344 (47%), Gaps = 43/344 (12%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E ++ + +++L C ++LE K + + V GF N + LV S G
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDM--YSKCGE 309
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ A +F +++ +NT+I G+ +EEAL L+ M V P++ TF A+ A
Sbjct: 310 IGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPA 369
Query: 141 CAKLQALKEGMQIHGHVFK----VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
CA L AL G +H ++ K G ++ + S+I MY KC VE A +F+ M +S
Sbjct: 370 CASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRS 429
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ASW+A+I+ A NG L LF EM NE ++P++ V VLSACT G ++LG
Sbjct: 430 LASWNAMISGLAMNGHAERALGLFEEMINEG-FQPDDITFVGVLSACTQAGFVELGH--- 485
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
R S++N + G+ + K Q Y MI LA G+
Sbjct: 486 ----RYFSSMNK----------------DYGI------SPKLQ-HYGCMIDLLARSGKFD 518
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
EA + M +EPD ++ +L+AC G V G +R+
Sbjct: 519 EAKVLMGNM---EMEPDGAIWGSLLNACRIHGQVEFGEYVAERL 559
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 130/310 (41%), Gaps = 41/310 (13%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM--YGKCEKVEFASAIFKQMDQ 194
L C + +LK QIH + K G LF Q+ LI + +A ++F +
Sbjct: 31 LLAKCPDIPSLK---QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHH 87
Query: 195 K--SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT-------- 244
+ ++ W+ +I AH+ + L LF +M + + P S+ +C
Sbjct: 88 QPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLY-PNSHTFPSLFKSCAKSKATHEA 146
Query: 245 ---HLGALDL-------------------GKCTHGSLIRNISAL-NVIVETSLIDMYVKC 281
H AL L G+ H L+ + S L + + T+LI YV
Sbjct: 147 KQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSE 206
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ LF + K ++++ MI+G G+ +EAL+ F+ M + P+ V VL
Sbjct: 207 GHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVL 266
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SAC H + G ++ + +Q +VD+ + G +G A +L M ++
Sbjct: 267 SACGHLRSLELGKWIGSWVR-DRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGME-DKD 324
Query: 402 DVVWRSLLSA 411
++W +++
Sbjct: 325 VILWNTMIGG 334
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/591 (40%), Positives = 351/591 (59%), Gaps = 25/591 (4%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T+ + C N K++H ++ G + +C S+L+ +S ++ YA IF I P
Sbjct: 154 TLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIK---ISSKFNLPYAFKIFNYISNPT 210
Query: 96 AFDFNTLIRGFVKEV---EFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQA-LKEG 150
F +NTLI + + + A LYN++ + ++P++FTFP+LFKAC Q+ G
Sbjct: 211 IFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYG 270
Query: 151 MQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
+H HV K + D FVQ SL+N Y K K+ + IF ++++ +A+W+ I+ A+A
Sbjct: 271 PLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYAR 330
Query: 210 NGLWS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ + E L LF +M RP E +V+++SAC++LGA+ G H
Sbjct: 331 SSSYHSYSNSFDDADFSLESLYLFRDMQVIGI-RPNEVTIVALISACSNLGAVSQGFWVH 389
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQ 314
++RN +N V T+ +DMY KCGCL +F M D+ Y+ MI G A+HG
Sbjct: 390 CFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGY 449
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
G +AL ++ +M +GL PD +V + ACSH GLV EGL F MK + + P ++HYG
Sbjct: 450 GNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYG 509
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
C++DL+GRAG L EA E + MP++ N V+WRSLL A+++H NL +GE+A L ++
Sbjct: 510 CLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPE 569
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
+YVLLSNMYA R DV ++R M G+N+ PGFSLVE+ +++F++ DRSHP
Sbjct: 570 TSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPF 629
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
IY I ++ +L+ G+ S+ L D++E++K L HS++LAIAFALI
Sbjct: 630 SKEIYLKIAEINSRLEEYGHKARTSEALFDLEEEDKEGVLSYHSERLAIAFALIASPSSL 689
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCH +TKLISV Y REIIVRDR RFH FKDG+CSC DYW
Sbjct: 690 AIRIIKNLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/594 (39%), Positives = 349/594 (58%), Gaps = 16/594 (2%)
Query: 15 QPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TC 73
QP + P P N L+ L +L +VHAH++ G+ + + L+ C
Sbjct: 5 QPHKLPHSPAYNFLLQAGPRLYLLH---------QVHAHIIVSGYGRSRSLLTKLLNLAC 55
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNF 132
A GS+ Y IF + P +F F +LI+ K F +L+ Y+ M V P N+
Sbjct: 56 AA---GSISYTRQIFLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNY 112
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
TF ++ K+CA L ALK G +HGHV GF D++VQ +L+ +YGKC + A +F ++
Sbjct: 113 TFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKI 172
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
++S+ +W+++I+ + NG E + LF M E P+ + VSVLSAC HLGA LG
Sbjct: 173 RERSIVAWNSMISGYEQNGFAKEAIGLFDRMK-ETGVEPDSATFVSVLSACAHLGAFSLG 231
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
H ++ N LNV++ TSLI+MY++CG + K +F M ++ + ++ MISG +
Sbjct: 232 CWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTN 291
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G G +A+ +F EM R GL P+ + +V VLSAC+HAGLVNEG F ++ EY +VP V+H
Sbjct: 292 GYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEH 351
Query: 373 YGCVVDLMGRAGMLGEALELI-QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
C+VD++GRAG+L EA I + +P + ++L A K+H N ++G A++L
Sbjct: 352 NVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAA 411
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
+P+ YV+LSN+YA A R V +R M K L + G+S VEV +K Y F D+S
Sbjct: 412 EPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKS 471
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
H + IY + ++ W+ GY P V+ +++E+E+ L+ HS+KLAIAF L+ S
Sbjct: 472 HSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELEEEEREYALRYHSEKLAIAFGLLKTS 531
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+PIRI +NLRMC DCH+ K IS I REIIVRD+ RFH FK G+CSC DYW
Sbjct: 532 HGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVRDKLRFHHFKVGSCSCLDYW 585
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/563 (40%), Positives = 341/563 (60%), Gaps = 3/563 (0%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
NL + ++VH G N A+ LV S++ ++D A +F + + ++ +
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXF--YSYYRALDDAYGLFDGMCVRDSVSWSVM 807
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ GF K ++ + E+ G PDN+T P + +AC L+ L+ G IH V+K G
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ D FV +L++MYGKC ++E A +F +M ++ + +W+ +I +A G +E L LF +
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E P++ +V+V+ AC LGA+ + + R L+VI+ T++IDM+ KCG
Sbjct: 928 MREEGV-VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 986
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
C+E +F M +K +++S MI+ HGQG++AL +F MLR G+ P+ + V +L
Sbjct: 987 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSHAGLV EGL F M +Y + V+HY CVVDL+GRAG L EAL+LI SM ++++
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDE 1106
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+W + L A + H ++ + E AA +L ++ +P Y+LLSN+YA A RW DVAKIR M
Sbjct: 1107 GLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLM 1166
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
+ + L + PG++ +EV K ++F D +HP IYEM+ + +L+ GY PD + VL
Sbjct: 1167 SQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVL 1226
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DVDE+ K L HS+KLAIAF LI + +PIRI +NLR+C DCHT+ KL+S I R
Sbjct: 1227 HDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRV 1286
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFH FK+G CSC DYW
Sbjct: 1287 IIVRDANRFHHFKEGACSCGDYW 1309
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 337/579 (58%), Gaps = 6/579 (1%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP 63
T SL L EE RL + ++ L C+NL + ++VHA G N
Sbjct: 35 TQFRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENI 94
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
A+ L+ S++ ++D A +F + + ++ ++ GF K ++ + E+
Sbjct: 95 VVANKLIYF--YSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELI 152
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
G PDN+T P + +AC L+ L+ G IH V+K G + D FV +L++MY KC ++E
Sbjct: 153 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIE 212
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F +M ++ + +W+ +I +A G +E L LF +M E P++ +V+V+ AC
Sbjct: 213 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV-VPDKVAMVTVVFAC 271
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
LGA+ + + R L+VI+ T++IDMY KCGC+E +F M +K +++S
Sbjct: 272 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWS 331
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI+ HGQG++AL +F ML G+ PD + +L ACSHAGLV EGL F M +
Sbjct: 332 AMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWED 391
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y + V+HY CVVDL+GRAG L EAL+LI+SM I++++ +W + L A + H ++ + E
Sbjct: 392 YSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEK 451
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AA +L ++ S +P YVLLSN+YA A RW DVAKIR M+ + L ++PG++ +EV K +
Sbjct: 452 AATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSH 511
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
+F D +HP IYEM+ + +L+ GY PD + VL DVDE+ K L HS+KLAI
Sbjct: 512 QFSVGDTTHPRSKEIYEMLKSLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAI 571
Query: 544 AFALIHLSQGSPIRIARNLR---MCNDCHTYTKLISVIY 579
AF LI + +PIRI +NLR + + H ++ +++++Y
Sbjct: 572 AFGLIATPEHTPIRIIKNLREKKLYLELHVHSSIVNLVY 610
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/585 (41%), Positives = 348/585 (59%), Gaps = 15/585 (2%)
Query: 32 QECLTILK---TCKNLEEFKKVHAHVLKWGF--FWNPFCASNLVATCALSHWGS--MDYA 84
+ C+ +L+ ++ K++HA L+ +P A +L+ A G + YA
Sbjct: 16 RHCVALLRLHLPSPSVAAAKQIHARALRAAGVPLSHPLLAKHLLFHLASLRAGPPPLLYA 75
Query: 85 CSIFR-QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
++ + +P F NT++R AL L+ R PD T+P L +AC +
Sbjct: 76 VTVLSCLLPDPDPFSLNTVLRIAASSAHPRIALALHRR---RLAPPDTHTYPPLLQACTR 132
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWS 201
L AL+EG +H K G +FV+NSL++ YG C E A +F ++ ++++ SW+
Sbjct: 133 LLALREGESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWN 192
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+++ A+NG +E L +F E E P+ +VSVL+AC +GAL LG+ H +
Sbjct: 193 SVMNGFAANGRPNEVLTIFRE-TLEADLMPDGFTIVSVLTACAEIGALTLGRRVHVFASK 251
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALS 320
N V +LID+Y KCG +E +F M + ++++ +I GLA +G GK+AL
Sbjct: 252 VGLVGNSHVGNALIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALE 311
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M RE L P D+ VGVL ACSH GLV++G F+ M+ +Y I P ++H GC+VDL+
Sbjct: 312 LFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLL 371
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG + EA I +MP++ N VVWR+LL A +H LE+GE A L +++ H DYV
Sbjct: 372 GRAGRVEEAHNYITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYV 431
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA RW D +R MA+ G+ ++PG SLVE+ VY+FV DRSHP D IY+
Sbjct: 432 LLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSLVELRNSVYEFVMGDRSHPESDQIYQ 491
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ ++ +L+ +GY P S VL D++E+EK L HS++LAIAFAL+ GSPIRI +
Sbjct: 492 TLAEIAERLRCQGYVPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGSPIRIVK 551
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLRMC DCH KLIS +Y+REIIVRDR RFH FK G CSC+DYW
Sbjct: 552 NLRMCGDCHLVIKLISKVYDREIIVRDRSRFHHFKGGECSCKDYW 596
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/557 (39%), Positives = 342/557 (61%), Gaps = 4/557 (0%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H +++K +P L+ +C + S+ YA +F +I P +NT+IR +
Sbjct: 6 RLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSHSR 65
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+L + M G+ DNFTFP + KAC++LQ + +H + K G D+FV
Sbjct: 66 FFP-SHSLSYFFSMRSNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGLGSDIFV 121
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
QN+LI +YG C +E A +F +M ++ SWS +IA+ +NG SE L LF +M E
Sbjct: 122 QNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDK 181
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+E ++SV+SA +HLG L+LG+ + R ++V + T+LIDM+ +CG +++ +
Sbjct: 182 VVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESI 241
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F MA + LT++ +I+GL +HG+ EAL++F M + G++PD V + GVL ACSH G
Sbjct: 242 VVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGG 301
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV EG F+ ++ Y + P + HYGC+VD++GRAG+L EA + ++ MP++ N ++WR+L
Sbjct: 302 LVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTL 361
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A H+NL + E + +I+S D VLLSN+Y A RW + A IR++M K +
Sbjct: 362 LGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIG 421
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S + V + +++FVS D SHP ++I + + + L+ GY VL D++E+
Sbjct: 422 KEPGCSSINVDQTIHEFVSGDNSHPQSEDITKFLSSIIGDLRNRGYMMQTKNVLHDIEEE 481
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
E+ L HS+KLA+AFA++ + IRI +NLR+C DCH++ K ISV +ER+II+RDR
Sbjct: 482 EREHSLSYHSEKLAVAFAILSMKDKRTIRIMKNLRICYDCHSFMKHISVRFERKIIIRDR 541
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+ G CSC DYW
Sbjct: 542 NRFHHFEKGLCSCHDYW 558
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 128/254 (50%), Gaps = 7/254 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C L+ +H+ ++K+G + F + L+ C + GS++ A +F ++ E +
Sbjct: 93 VLKACSRLQINLHLHSLIVKYGLGSDIFVQNALI--CVYGYCGSLEMAVKVFDEMSERDS 150
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
++T+I F+ EAL L+ +M E V PD T ++ A + L L+ G +
Sbjct: 151 VSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRA 210
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ ++GF + + +LI+M+ +C ++ + +F++M ++V +W+A+I +G E
Sbjct: 211 FIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSME 270
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE--TS 273
L +F M +P+ VL AC+H G + G S IR + ++ +++
Sbjct: 271 ALAMFHSMRKSGV-QPDYVTFSGVLVACSHGGLVKEGWDIFES-IRKVYGMDPLLDHYGC 328
Query: 274 LIDMYVKCGCLEKG 287
++D+ + G L +
Sbjct: 329 MVDILGRAGLLNEA 342
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/582 (39%), Positives = 361/582 (62%), Gaps = 18/582 (3%)
Query: 38 LKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+K+C +L K+ H L +GF + F +S L+ S G + A +F +I
Sbjct: 89 IKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDM--YSKCGKLSNARVLFDEIPRR 146
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNE-MFER--------GVEPDNFTFPALFKACAKL- 144
+ +LI G+V+ + EAL ++ E +FE+ G D+ ++ AC+++
Sbjct: 147 NIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVS 206
Query: 145 -QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+A+ EG +HG KVG + + V+N+L++ Y KC +V + +F M +K V SW+++
Sbjct: 207 NKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSM 264
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA +A NGL ++ ++F M + E L ++L AC H GAL +G C H +I+
Sbjct: 265 IAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMG 324
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
NVI+ TS+IDMY KCG E F M +K +++ MI+G MHG +EAL +F
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFY 384
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M+ G++P+ + ++ VL+ACSHAG + EG F+ M EY + P V+HYGC+VDL+GRA
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRA 444
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G + EA LI+SM ++++ V+W SLL+A ++H ++E+ EI+A+ LF+++ + YVLL+
Sbjct: 445 GYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLA 504
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A RW DV ++R + +GL + PG+SLVE+ +V+ F+ D+ HP + IY+ +
Sbjct: 505 NIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLE 564
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +L+ GY P+++ VL DVDE+EK ++ HS+KLA+AF +++ GS I + +NLR
Sbjct: 565 ELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLR 624
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT KLIS I REIIVRD KRFH FKDG CSC DYW
Sbjct: 625 VCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 171/337 (50%), Gaps = 13/337 (3%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ D + +N+LI + + E+L ++ M + ++P+ TFP K+C+ L L
Sbjct: 40 KYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLN 99
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q H GFE DLFV ++LI+MY KC K+ A +F ++ ++++ +W+++I +
Sbjct: 100 SGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYV 159
Query: 209 SNGLWSECLKLFGEM-------NNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLI 260
N E L +F E N E+ +S+ ++SVLSAC+ + + + HG I
Sbjct: 160 QNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAI 219
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ + VE +L+D Y KCG + +F MA+K ++++ MI+ A +G +A
Sbjct: 220 KVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFE 279
Query: 321 IFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVD 378
+F ML+ G + ++V +L AC+H G + G+ D+ +K+ Y V V ++D
Sbjct: 280 VFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGY--VNNVIMATSIID 337
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + G A M ++N W ++++ +H
Sbjct: 338 MYCKCGQAEMARNAFDGMK-EKNVRSWTAMIAGYGMH 373
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/597 (39%), Positives = 354/597 (59%), Gaps = 35/597 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA------------------- 74
+ K+C K +E K++HA +LK+G + ++L++ A
Sbjct: 84 LFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRD 143
Query: 75 ----------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
+ G+MD A +F +I +N +I G+ + ++EAL L+NEM +
Sbjct: 144 VVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMK 203
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V+PD T + C ++ G QIH + GF +L + N+LI++Y KC ++E
Sbjct: 204 MDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMER 263
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I +A E L +F EM + P + ++S+L AC
Sbjct: 264 AHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEML-KLGETPNDVTMLSILPACA 322
Query: 245 HLGALDLGKCTHGSLIRNISAL--NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + N ++TSLIDMY KCG +E +F + +K +
Sbjct: 323 HLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSC 382
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A + S M ++G+EPDD+ +VG+LSACSHAGL + G F M L
Sbjct: 383 NAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTL 442
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+YRI P ++HYGC++DL+GR+G+ EA ELI SM ++ + V+W SLL A K+H NLE+GE
Sbjct: 443 DYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGE 502
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
+ A+ L +I +P YVLLSN+YA + RW DVA++RT + KGL + PG S +E+ V
Sbjct: 503 LIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMV 562
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY+M+ +++ L G+ D S+VL++++E+ K L HS+KLA
Sbjct: 563 HEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLA 622
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
IAF LI G+ +RI +NLR+C +CH TKLIS IY+REII RDR RFH FKDG C
Sbjct: 623 IAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 175/331 (52%), Gaps = 33/331 (9%)
Query: 55 LKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
+K G + S L+ C L+ ++ + YA S+F+ I EP +NT+IRG +
Sbjct: 1 IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
AL LY M G+ P+++TFP LFK+CAK +A +EG QIH + K G DL V SLI
Sbjct: 61 SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120
Query: 174 NMYGKCEKVEFASAIFK---------------------QMDQ----------KSVASWSA 202
+MY + VE A +F MD+ K V SW+A
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ +A G + E L+LF EM +P+ES + +VLS CTH G ++LG+ H + +
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDV-KPDESTMATVLSTCTHSGNVELGRQIHSWIDNH 239
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
N+ + +LID+Y KCG +E+ LF + K ++++ +I G A KEAL +F
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVF 299
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
EML+ G P+DV + +L AC+H G ++ G
Sbjct: 300 QEMLKLGETPNDVTMLSILPACAHLGAIDIG 330
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 50/350 (14%)
Query: 24 ELNLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----S 76
+++++ E T+L TC N+E +++H+ + GF SNL AL S
Sbjct: 203 KMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGF------GSNLKLVNALIDLYS 256
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
G M+ A +F + +NTLI G+ +EAL ++ EM + G P++ T +
Sbjct: 257 KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLS 316
Query: 137 LFKACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+ ACA L A+ G IH ++ K G + +Q SLI+MY KC +E A+ +F +
Sbjct: 317 ILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILN 376
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
KS++S +A+I A +G L M + P++ V +LSAC+H G DLG+
Sbjct: 377 KSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGI-EPDDITFVGLLSACSHAGLSDLGRK 435
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
S+ L+ +E L Y MI L G
Sbjct: 436 IFKSM-----TLDYRIEPKLEH-------------------------YGCMIDLLGRSGL 465
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACS-HAGLVNEGLLCFDRMKLE 363
KEA + + M +EPD V++ +L AC H L L+ MK+E
Sbjct: 466 FKEAEELINSMT---MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIE 512
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 47/340 (13%)
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+ +A ++FK + + + SW+ +I HA + L L+ M + P +
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGL-SPNSYTFPFLFK 86
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF---------- 291
+C A GK H +++ +++ V TSLI MY + G +E +F
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146
Query: 292 ----------RMMADKCQ-----------LTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
R DK Q ++++ MISG A G+ KEAL +F+EM++ +
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD+ VLS C+H+G V G + + ++ ++DL + G + A
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWID-NHGFGSNLKLVNALIDLYSKCGEMERAH 265
Query: 391 ELIQSMPIQQNDVV-WRSLLSA-SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
L + + Q DV+ W +L+ + ++H+ E + + + ++ P+D +LS + A
Sbjct: 266 GLFEGL--QYKDVISWNTLIGGYAYINHHKE-ALLVFQEMLKLGE-TPNDVTMLSILPAC 321
Query: 449 AQ-------RWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
A RW V I ++ N S SL+++ K
Sbjct: 322 AHLGAIDIGRWIHVY-IDKKLKGIITNTSLQTSLIDMYAK 360
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/603 (38%), Positives = 356/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C L+ K ++H HVLK G+ + + ++L++
Sbjct: 69 LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + S Y A ++F +I +N +I G+V+ ++EAL L+ EM +
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T + A A+ +++ G Q+H + GF +L + N+LI+ Y KC ++E
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSG-ESPNDVTMLSILHACA 307
Query: 245 HLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F M K +
Sbjct: 308 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAW 367
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A IFS M + ++PDD+ +VG+LSACSHAG+++ G F M
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTH 427
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
Y+I P ++HYGC++DL+G +G+ EA E+I +M ++ + V+W SLL A K+H N+E+GE
Sbjct: 428 NYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGE 487
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NLF+I ++P YVLLSN+YA A RW +VA+IR + KG+ + PG S +E+ V
Sbjct: 488 KFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVV 547
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 548 HEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLA 607
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI + + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 608 IAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 667
Query: 603 DYW 605
DYW
Sbjct: 668 DYW 670
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/376 (32%), Positives = 196/376 (52%), Gaps = 35/376 (9%)
Query: 73 CALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
C LS H+ + YA S+F I EP +NT+ RG + AL LY M G+ P++
Sbjct: 4 CILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNS 63
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK---------- 181
+TFP L K+CAKL+A KEG+QIHGHV K+G+E DL+V SLI+MY + E+
Sbjct: 64 YTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDR 123
Query: 182 ---------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
+E A +F ++ K V SW+A+I+ + G + E L+LF
Sbjct: 124 SSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELF 183
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
EM RP+ES +V+V+SA G+++LG+ H + + N+ + +LID Y K
Sbjct: 184 KEMMKTNV-RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSK 242
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG +E LF ++ K ++++++I G KEAL +F EMLR G P+DV + +
Sbjct: 243 CGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSI 302
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY-GCVVDLMGRAGMLGEALELIQSMPIQ 399
L AC+H G ++ G + + V ++D+ + G + A ++ SM +
Sbjct: 303 LHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LH 361
Query: 400 QNDVVWRSLLSASKVH 415
++ W +++ +H
Sbjct: 362 KSLPAWNAMIFGFAMH 377
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 151/342 (44%), Gaps = 59/342 (17%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N+R E +T++ ++E ++VH+ + GF SNL AL S
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGF------GSNLKIVNALIDFYSKC 243
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M+ AC +F + +N LI G+ ++EAL L+ EM G P++ T ++
Sbjct: 244 GEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSIL 303
Query: 139 KACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA L A+ G IH ++ K G ++ SLI+MY KC +E A +F M KS
Sbjct: 304 HACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS 363
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ +W+A+I A +G + +F M + +P++ V +LSAC+H G LDLG+
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEI-KPDDITFVGLLSACSHAGMLDLGR--- 419
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAM 311
+FR M ++T Y MI L
Sbjct: 420 --------------------------------HIFRSMTHNYKITPKLEHYGCMIDLLGH 447
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G KEA + S M +EPD V++ +L AC G V G
Sbjct: 448 SGLFKEAEEMISTMT---MEPDGVIWCSLLKACKMHGNVELG 486
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/602 (39%), Positives = 353/602 (58%), Gaps = 36/602 (5%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASN----LVATCA--------------- 74
+LK L++ K ++HA +K+G+ + +N + C
Sbjct: 98 VLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAM 157
Query: 75 LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
+ G +D + ++F + +NT+I F + F EAL + M GVE D T
Sbjct: 158 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTI 217
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDL----FVQNSLINMYGKCEKVEFASAIFK 190
++ AC+ L+ L G +IH +V + DL FV ++L++MY C +VE +F
Sbjct: 218 ASVLPACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGRRVFD 274
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH-LGAL 249
+ + + W+A+I+ +A NGL + L LF EM P + + SV+ AC H L A+
Sbjct: 275 HILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAI 334
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
GK H IRN+ A ++ V ++L+DMY KCGCL +F M +K +T++V+I
Sbjct: 335 AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC 394
Query: 310 AMHGQGKEALSIFSEMLREG-----LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MHG+G+EAL +F M+ E +P++V ++ V +ACSH+GL++EGL F RMK ++
Sbjct: 395 GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 454
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEI 423
+ PT HY CVVDL+GRAG L EA EL+ +MP + + V W SLL A ++H N+E+GE+
Sbjct: 455 GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEV 514
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAKNL + + S YVLLSN+Y+ A W ++R M G+ + PG S +E +V+
Sbjct: 515 AAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVH 574
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
KF++ D SHP + ++ + + +++ EGY PD S VL +VDEDEK L GHS+KLAI
Sbjct: 575 KFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAI 634
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF +++ G+ IR+A+NLR+CNDCH TK IS I EREIIVRD +RFH FK+GTCSC D
Sbjct: 635 AFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGD 694
Query: 604 YW 605
YW
Sbjct: 695 YW 696
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 25/336 (7%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+R + +F EA+ Y EM G PDNF FPA+ KA + LQ LK G QIH K G+
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 163 -ECDLFVQNSLINMYGKC--------------------EKVEFASAIFKQMDQKSVASWS 201
+ V N+L+NMYGKC +V+ + A+F+ + + SW+
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWN 183
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+I++ + + +SE L F M E + + SVL AC+HL LD+GK H ++R
Sbjct: 184 TMISSFSQSDRFSEALAFFRLMVLEGV-ELDGVTIASVLPACSHLERLDVGKEIHAYVLR 242
Query: 262 NISAL-NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
N + N V ++L+DMY C +E G +F + + ++ MISG A +G ++AL
Sbjct: 243 NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 302
Query: 321 IFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F EM++ GL P+ V+ AC H+ + + + +VD+
Sbjct: 303 LFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDM 362
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G L + + MP +N + W L+ A +H
Sbjct: 363 YAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMH 397
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/648 (36%), Positives = 371/648 (57%), Gaps = 74/648 (11%)
Query: 28 RLKEQECLTILKT--CKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMD 82
+L + L +L T +L K+ HA +L+ G + + A +LV A + + + S +
Sbjct: 29 KLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFE 88
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
+ +F + +P F +N +I+ ++ E +A+ LY EM P+ +T+PA+ KAC+
Sbjct: 89 SSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACS 148
Query: 143 KL-----------QALKEGMQIHGHVFKV---------------------GFECDLFVQN 170
+K G+ GH+ G E D N
Sbjct: 149 DAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWN 208
Query: 171 SLINMY--------------------------------GKCEKVEFASAIFKQMDQKSVA 198
++I+ Y +C VE A F +M ++
Sbjct: 209 AMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEI 268
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SWSA+I + G + E L++F +M EK RP + +L SVLSAC +LGALD G+ H
Sbjct: 269 SWSAMIDGYIQEGCFMEALEIFHQMQKEKI-RPRKFVLPSVLSACANLGALDQGRWIHTY 327
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
RN L+ ++ TSL+DMY KCG ++ +F M++K +++ MI GLAMHG+ ++A
Sbjct: 328 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDA 387
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +FS+M + P+++ +VGVL+AC+H GLV +GL F+ M+ EY + P ++HYGC+VD
Sbjct: 388 IDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 444
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG+L EA +++ S+P + VW +LL A + H N+E+GE K L ++ +
Sbjct: 445 LLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGR 504
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR-KVYKFVSQDRSHPAWDN 497
Y LLSN+YA+A RW +V ++R M +G+ +PG S++++ R +V+KF+ D SHP +
Sbjct: 505 YTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKD 564
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY+M+ +++ +L+ EGY PD SQVL D+DE+EK + HS+KLAI F LI+ S G+ IR
Sbjct: 565 IYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIR 624
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C DCH+ TKLIS +Y REIIVRDR R+H F++G CSC+D+W
Sbjct: 625 IVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/572 (39%), Positives = 343/572 (59%), Gaps = 5/572 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ C + + K++ A+++ G F + L+ CA+S +G + YA IFR I P
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRYIPYPST 66
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEP-DNFTFPALFKACAKLQALKEGMQIH 154
D+N +IRG + A+F Y M G+ D T KACA+ A E +Q+H
Sbjct: 67 NDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEAIQLH 126
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ + GF D+ +Q +L++ Y K ++ A +F +M Q +ASW+A+IA A +
Sbjct: 127 SQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPA 186
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ + F M + RP + L AC+ LGAL G+ H ++ NV V +
Sbjct: 187 DAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLNSNVQVCNVV 246
Query: 275 IDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
IDMY KCG ++K +F M DK +T++ MI AMHG G +AL +F ++ R G+ PD
Sbjct: 247 IDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPD 306
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V Y+ VL AC+HAGLV +GL F+ M + + P ++HYG +VDL+GRAG L EA +++
Sbjct: 307 AVSYLAVLCACNHAGLVEDGLKLFNSMT-QRGLEPNIKHYGSMVDLLGRAGRLKEAYDIV 365
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
S+P N V+W++LL A + + ++E+ E+A++ L ++ D+VLLSN+YA QRW
Sbjct: 366 SSLPFP-NMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWD 424
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
DV ++R M + + ++PGFS +E+ K+YKFV+ D+SH + IY + ++ ++K G
Sbjct: 425 DVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYG 484
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
YS D S VL D+ +++K L HS+KLA+AF L +G+PI++ +NLR+C DCH K
Sbjct: 485 YSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIK 544
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS IY REIIVRDR RFHRFK+G CSC+DYW
Sbjct: 545 LISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 240/657 (36%), Positives = 374/657 (56%), Gaps = 75/657 (11%)
Query: 20 PKGPELNL-RLKEQECLTILKT--CKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATC 73
PKG +L + L +L T +L K+ HA +L+ G + + A +LV A
Sbjct: 21 PKGHSTETSKLSHKAILHLLNTQCTTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANV 80
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
+ + + S + + +F + +P F +N +I+ ++ E +A+ LY EM P+ +T
Sbjct: 81 STNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYT 140
Query: 134 FPALFKACAK-----------LQALKEGMQIHGHVFKV---------------------G 161
+PA+ KAC+ +K G+ GH+ G
Sbjct: 141 YPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG 200
Query: 162 FECDLFVQNSLINMY--------------------------------GKCEKVEFASAIF 189
E D N++I+ Y +C VE A F
Sbjct: 201 GEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFF 260
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+M ++ SWSA+I + G + E L++F +M EK RP + +L SVLSAC +LGAL
Sbjct: 261 DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKI-RPRKFVLPSVLSACANLGAL 319
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
D G+ H RN L+ ++ TSL+DMY KCG ++ +F M++K +++ MI GL
Sbjct: 320 DQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGL 379
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
AMHG+ ++A+ +FS+M + P+++ +VGVL+AC+H GLV +GL F+ M+ EY + P
Sbjct: 380 AMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQ 436
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
++HYGC+VDL+GRAG+L EA +++ S+P + VW +LL A + H N+E+GE K L
Sbjct: 437 IEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILL 496
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR-KVYKFVSQ 488
++ + Y LLSN+YA+A RW +V ++R M +G+ +PG S++++ R +V+KF+
Sbjct: 497 ELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIG 556
Query: 489 DRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI 548
D SHP +IY+M+ +++ +L+ EGY PD SQVL D+DE+EK + HS+KLAI F LI
Sbjct: 557 DGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLI 616
Query: 549 HLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ S G+ IRI +NLR+C DCH+ TKLIS +Y REIIVRDR R+H F++G CSC+D+W
Sbjct: 617 NTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/600 (39%), Positives = 354/600 (59%), Gaps = 35/600 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLV---ATCALSHWGSMDYACSIF 88
++L C +LE K++HA+VL+ N F S LV C G + +
Sbjct: 302 SVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILG 361
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQAL 147
R+I+ +N +I G+ + E+AL L+ EM + G+ P+ T ++ AC +A
Sbjct: 362 RRIEL-----WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAF 416
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
IHG+ K+GF+ D +VQN+L++MY + K++ + IF M+ + SW+ +I +
Sbjct: 417 SNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGY 476
Query: 208 ASNGLWSECLKLFGEMNNEK----------------CWRPEESILVSVLSACTHLGALDL 251
+G +S L L EM + ++P L++VL C L A+
Sbjct: 477 VLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAK 536
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK H IRN+ A ++ V ++L+DMY KCGCL +F M +K +T++V+I M
Sbjct: 537 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 596
Query: 312 HGQGKEALSIFSEMLREG-----LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
HG+G+EAL +F M+ E +P++V ++ V +ACSH+GL++EGL F RMK ++ +
Sbjct: 597 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 656
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAA 425
PT HY CVVDL+GRAG L EA EL+ +MP + + V W SLL A ++H N+E+GE+AA
Sbjct: 657 EPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAA 716
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
KNL + + S YVLLSN+Y+ A W ++R M G+ + PG S +E +V+KF
Sbjct: 717 KNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKF 776
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
++ D SHP + ++ + + +++ EGY PD S VL +VDEDEK L GHS+KLAIAF
Sbjct: 777 MAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAF 836
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+++ G+ IR+A+NLR+CNDCH TK IS I EREIIVRD +RFH FK+GTCSC DYW
Sbjct: 837 GILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 126/248 (50%), Gaps = 6/248 (2%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+R + +F EA+ Y EM G PDNF FPA+ KA + LQ LK G QIH K G+
Sbjct: 64 LRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGY 123
Query: 163 -ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
+ V N+L+NMYGKC + +F ++ + SW++ IAA W + L+ F
Sbjct: 124 GSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFR 183
Query: 222 EMNNEKCWRPEESILVSVLSACTHLG---ALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
M E LVSV AC++LG L LGK HG +R + +L+ MY
Sbjct: 184 AMQMEN-MELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR-VGDQKTFTNNALMAMY 241
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
K G ++ LF D+ ++++ MIS + + EAL+ F M+ EG+E D V
Sbjct: 242 AKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIA 301
Query: 339 GVLSACSH 346
VL ACSH
Sbjct: 302 SVLPACSH 309
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 195/384 (50%), Gaps = 15/384 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK L++ K ++HA +K+G+ + +N + G + C +F +I +
Sbjct: 98 VLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVN-MYGKCGGIGDVCKVFDRITD 156
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKEG 150
+N+ I + ++E+AL + M +E +FT ++ AC+ L L+ G
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+HG+ +VG + F N+L+ MY K +V+ + A+F+ + + SW+ +I++ + +
Sbjct: 217 KQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS 275
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVI 269
+SE L F M E + + SVL AC+HL LD+GK H ++RN + N
Sbjct: 276 DRFSEALAFFRLMVLEGV-ELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSF 334
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-E 328
V ++L+DMY C +E G +F + + ++ MISG A +G ++AL +F EM++
Sbjct: 335 VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVA 394
Query: 329 GLEPDDVVYVGVLSACSHA-GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
GL P+ V+ AC H N+ + +KL ++ VQ+ ++D+ R G +
Sbjct: 395 GLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQN--ALMDMYSRMGKMD 452
Query: 388 EALELIQSMPIQQNDVVWRSLLSA 411
+ + SM + ++ V W ++++
Sbjct: 453 ISETIFDSMEV-RDRVSWNTMITG 475
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 186/417 (44%), Gaps = 35/417 (8%)
Query: 26 NLRLKEQECLTILKTCKNLEEF------KKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
N+ L +++ C NL K++H + L+ G F + L+A A G
Sbjct: 189 NMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD-QKTFTNNALMAMYA--KLG 245
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+D + ++F + +NT+I F + F EAL + M GVE D T ++
Sbjct: 246 RVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLP 305
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDL----FVQNSLINMYGKCEKVEFASAIFKQMDQK 195
AC+ L+ L G +IH +V + DL FV ++L++MY C +VE +F + +
Sbjct: 306 ACSHLERLDVGKEIHAYVLR---NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 362
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ W+A+I+ +A NGL + L LF EM P + + SV+ AC H A +
Sbjct: 363 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESI 422
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++ + V+ +L+DMY + G ++ +F M + +++++ MI+G + G+
Sbjct: 423 HGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRY 482
Query: 316 KEALSIFSEMLR-----------------EGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
AL + EM R +P+ + + VL C+ + +G
Sbjct: 483 SNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKE-IH 541
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + + +VD+ + G L + + MP +N + W L+ A +H
Sbjct: 542 AYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMH 597
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/590 (40%), Positives = 357/590 (60%), Gaps = 24/590 (4%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIFRQID 92
T+L+TC ++ + K++HA L+ + P F ++ S + ++YA +F I+
Sbjct: 30 TVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIE 87
Query: 93 EPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEG 150
+F +NTLIR +V EEA LY +M ERG PD TFP + KACA + EG
Sbjct: 88 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 147
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H + K GF D++V N LI++YG C ++ A +F +M ++S+ SW+++I A
Sbjct: 148 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 207
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS---ALN 267
G + L+LF EM ++ + P+ + SVLSAC LG+L LG H L+R A++
Sbjct: 208 GEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 265
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML- 326
V+V+ SLI+MY KCG L +F+ M + +++ MI G A HG+ +EA++ F M+
Sbjct: 266 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 325
Query: 327 -REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
RE + P+ V +VG+L AC+H G VN+G FD M +Y I P ++HYGC+VDL+ RAG
Sbjct: 326 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 385
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD------ 438
+ EA++++ SMP++ + V+WRSLL A K ++E+ E A+N+ + S
Sbjct: 386 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSG 445
Query: 439 -YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLS +YA A RW DV +R M+ G+ + PG S +E+ ++F + D SHP
Sbjct: 446 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 505
Query: 498 IYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRE-RLKGHSQKLAIAFALIHLSQGSP 555
IY+ + ++ +L+ GY PD SQ L D D +E L+ HS++LAIAF LI+L +P
Sbjct: 506 IYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTP 565
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+CNDCH TKLIS ++ EIIVRDR RFH FKDG+CSC DYW
Sbjct: 566 IRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 615
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/580 (41%), Positives = 354/580 (61%), Gaps = 25/580 (4%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIFRQI 91
L L +C + + K++HA ++ +P F S ++ +L + YA +F QI
Sbjct: 30 LLFLNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLH---DLRYAFRVFHQI 86
Query: 92 DEPGAFDFNTLIRGFVKEVEFEE-ALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
+ P +F +N LIR + + ++ A+ LY+ M E+G V D TFP + KACA L AL E
Sbjct: 87 ENPNSFMWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSE 146
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G QIH + K+GF+ D+++ NSL++ Y C++++FA +F +M ++S+ SW+ +I A
Sbjct: 147 GEQIHAQILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVR 206
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G + L LFGEM +K + P+ + S+ +AC +G+L LG +V+
Sbjct: 207 FGEFDAALNLFGEM--QKFFEPDGYTIQSIANACAGMGSLSLGIVN-----------DVL 253
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-E 328
+ TSL+DMY KCG LE L LF M + +++ MI G + HG+ AL F M+R E
Sbjct: 254 LNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTE 313
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
L P+ + +VGVLSAC+H GLV+EG FD M EY+I P ++HYGC+VDL+ RAG++ E
Sbjct: 314 KLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDE 373
Query: 389 ALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD-YVLLSNMY 446
AL+++ +MP++ + V+WRSLL A K + +E+ E A+ + + S YVLLS +Y
Sbjct: 374 ALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVY 433
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A A RW DV +R M KG+ + PG S +E+ ++F + D SHP + IY + +E
Sbjct: 434 ASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEIYSALDVIE 493
Query: 507 WQLKFEGYSPDISQV-LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+++ GYSPD SQ + D D K+ L+ HS++LAIAF L+ G PIRI +NLR+C
Sbjct: 494 ERVERVGYSPDSSQAPMVDETIDGKQYSLRLHSERLAIAFGLLKTKPGMPIRIFKNLRVC 553
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
N+CH TKLIS ++ REIIVRDR RFH FKDG CSC DYW
Sbjct: 554 NNCHQVTKLISRVFNREIIVRDRIRFHHFKDGACSCMDYW 593
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/585 (39%), Positives = 342/585 (58%), Gaps = 29/585 (4%)
Query: 23 PELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
P L+ + L L +C + E K+ H+ +++ G + ++ CA+S G +
Sbjct: 12 PSLSSAKAHKLPLYGLDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGYLR 71
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
+ + +F+Y+ M + V P+ FT+P L +AC
Sbjct: 72 WQLA--------------------------RNCIFMYSRMLHKSVSPNKFTYPPLIRACC 105
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK--SVASW 200
A++EG QIH HV K GF D F N+LI+MY + +E A +F M Q+ + SW
Sbjct: 106 IDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSW 165
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A+IAA+ + E LF M E ++ + S+LSACT LGAL+ GK HG +
Sbjct: 166 NAMIAAYVQSNRLHEAFALFDRMRLENVVL-DKFVAASMLSACTGLGALEQGKWIHGYIE 224
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
++ L+ + T++IDMY KCGCLEK +F + K +++ MI GLAMHG+G+ A+
Sbjct: 225 KSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIE 284
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM RE + PD + +V VLSAC+H+GLV EG F M + P ++H+GC+VDL+
Sbjct: 285 LFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLL 344
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG+L EA +LI MP+ + V +L+ A ++H N E+GE K + ++ H+ YV
Sbjct: 345 GRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYV 404
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LL+N+YA A RW DVAK+R M +G+ ++PGFS++E V +F++ R+HP IY
Sbjct: 405 LLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYA 464
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ ++ ++ GY PD VL D+DE+EK L HS+KLAIAF L+ G +RI++
Sbjct: 465 KLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRISK 524
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH +KLIS +Y+REII+RDR RFH F+ G CSC+DYW
Sbjct: 525 NLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 241/618 (38%), Positives = 351/618 (56%), Gaps = 41/618 (6%)
Query: 1 MTRTSVLHQSLLLTQPEEPPK------------GPELNLRLKEQECLTILKTCKNLEEFK 48
M+++ L L +P PP GP R E + ++ L +
Sbjct: 1 MSKSQGLKALNALFKPTSPPAKTTTVTTTTRAHGPS---RSPETHFIPLIHASNTLPQLH 57
Query: 49 KVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++HA + F N + L+++ C+L S+DYA SIFR D P F FN LIRG
Sbjct: 58 QIHAQIFLHNLFSNSRVVTQLISSSCSLK---SLDYALSIFRCFDHPNLFVFNALIRGLA 114
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ FE ++ + M + PD T P + K+ A L + G +HG V K+G E D F
Sbjct: 115 ENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSF 174
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V+ SL++MY K ++ F +F + Q++ A S LW+
Sbjct: 175 VRVSLVDMYVKIGELGFGLQLFDESPQRNKAE---------SILLWNGV----------- 214
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
RP + +VS L ACT +GAL +G+ H L N LN + T+L+DMY KCG ++
Sbjct: 215 --RPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSA 272
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F K LT+SVMI G A+HG +AL F +M G+ PD+V+++ +L+ACSH+
Sbjct: 273 SRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHS 332
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G V++GL F+ M+L+Y I PT++HY +VDL+GRAG L EAL IQSMPI + V+W +
Sbjct: 333 GNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGA 392
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
L A + H N+E+ E+ A+ L Q+ HP YV LSN+YA RW DV ++RT M ++G+
Sbjct: 393 LFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGV 452
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PG+S +EV +V+ FV+ D +H + I + ++ K EGY P+ + VL +++E
Sbjct: 453 EKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEE 512
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK + L HS+KLA+AF LI + GS IRI +NLR+C DCH+ K S + REII+RD
Sbjct: 513 EEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRD 572
Query: 588 RKRFHRFKDGTCSCRDYW 605
KRFH FKDGTCSC DYW
Sbjct: 573 IKRFHHFKDGTCSCGDYW 590
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/573 (39%), Positives = 344/573 (60%), Gaps = 3/573 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS-MDYACSIFRQIDE 93
L++L C +L E K++ A+ +K + + L+ C L+ S MD+A +F QI +
Sbjct: 33 LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
FN + RG+ + A L+ E+ G+ PD++TF +L KACA +AL+EGM +
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K+G ++++ +LINMY +C + A +F +M+Q + S++AII +A +
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 212
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+E L LF E+ P + ++SV+ +C LGALDLGK H + + V V T+
Sbjct: 213 NEALSLFRELQASNI-EPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTA 271
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDM+ KCG L + +F M + +S MI A HG G +A+S+F EM REG+ PD
Sbjct: 272 LIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPD 331
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++ ++G+L ACSHAGLV +G F M Y I P ++HYGC+VDL+GRAG L EA +
Sbjct: 332 EITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFV 391
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ I+ ++WR+LLSA H N+E+ + + +F+++ H DYV+LSN+YAR RW
Sbjct: 392 DKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWE 451
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
DV +R M +G+ + PG S VEV V++F S D H + + ++ ++K G
Sbjct: 452 DVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVG 511
Query: 514 YSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
Y PD S V D++E+ K L+ HS+KLA+AF L++ G+ IR+A+NLR+C DCH
Sbjct: 512 YVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAA 571
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I+ R+I++RD +RFHRF+DG CSC D+W
Sbjct: 572 KLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/573 (40%), Positives = 351/573 (61%), Gaps = 7/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L++C K +E K++HA + + G +NP A+ LV + + S+ A +F +I
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICN--SLTNAHLLFDRIS 63
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ F +N +IRG+ +E A+ LY +M + G+ PD FTFP + KAC+ L A++EG +
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH V + G E D+FV +LI+MY KC VE A +F ++D++ V W++++A ++ NG
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L L M +P E V ++A G L GK HG R+ N V+T
Sbjct: 184 PDESLALCRVMAFNGL-KPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY K G + LF ++ +K ++++ MI+G AMHG EAL +F EM + L P
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-P 301
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +VGVL+ACSH GL+NEG + F M ++ I PTVQHY C++DL+G G L EA +L
Sbjct: 302 DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I M ++ + VW +LL + K+H N+E+GE+A + L ++ +YV+LSNMYA+A +W
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKW 421
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
VA++R M +KGL +S S +EV KV+ F+S+D SHP + IY + + +K
Sbjct: 422 DGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEA 481
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+P + V DV++DEK + + HS++LAIAF LI S G+ + I +NLR+C DCH
Sbjct: 482 GYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAI 541
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I EREI +RD R+H FKDG CSC D+W
Sbjct: 542 KFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 122/220 (55%), Gaps = 1/220 (0%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ +L ++C +A++ G Q+H + +VG + + L+N+Y C + A +F ++
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++++ W+ +I +A NG + + L+ +M + P++ VL AC+ L A++ GK
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGL-VPDKFTFPFVLKACSALSAMEEGK 122
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H +IR+ +V V +LIDMY KCGC+E +F + ++ + ++ M++ + +G
Sbjct: 123 KIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNG 182
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
Q E+L++ M GL+P + +V ++A + GL+ +G
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQG 222
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
S S+L +C A++ GK H + + + N ++ T L+++Y C L LF
Sbjct: 2 SYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDR 61
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++ + ++VMI G A +G + A+S++ +M GL PD + VL ACS + EG
Sbjct: 62 ISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEG 121
Query: 354 LLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLL 409
R LE + ++D+ + G + A ++ I + DVV W S+L
Sbjct: 122 KKIHKDVIRSGLESDVFVG----AALIDMYAKCGCVESARQVFDK--IDERDVVCWNSML 175
Query: 410 SA 411
+
Sbjct: 176 AT 177
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/563 (39%), Positives = 348/563 (61%), Gaps = 6/563 (1%)
Query: 47 FKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+++HA +L + F ++ CALS +G +DYA +F QI P F +N++IR
Sbjct: 4 LRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNSMIR 63
Query: 105 GFVK-EVEFEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
G + + +E + L+ +M RG P+ FT + KAC+ + AL+EG Q+H +V K GF
Sbjct: 64 GCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGF 123
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
FV+ +L+N Y KCE + AS +F ++ +++ +WS +I+ +A GL +E L LF +
Sbjct: 124 GSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRD 183
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M P+E +VSV+SAC GALD GK H + + + ++ + T+L++MY KCG
Sbjct: 184 MQKAGV-VPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCG 242
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
C+E+ +F M K +S MI GLA++G ++AL F M ++P+ V ++GVLS
Sbjct: 243 CIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLS 302
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
AC+H+GLV+EG + M LE+ IVP+++ YGC+VDL+ RA ++ +A L+++MPI N
Sbjct: 303 ACAHSGLVSEGRRYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNP 361
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
V+WR+LL K NL+ E+ A+ L ++ H+ +Y+LLSN+YA +W ++++R +M
Sbjct: 362 VIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKM 421
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G+ PG S +EV V++FV D SHP + E++ + ++ G+ P IS VL
Sbjct: 422 KGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAVGHQPGISDVL 481
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
+V ++EK L HS++LAIA+ L+ IRI +NLR+C DCH TK+IS Y RE
Sbjct: 482 HNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVTKIISAEYRRE 541
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRDR RFH+F +G+CSCRD+W
Sbjct: 542 IIVRDRVRFHKFVNGSCSCRDFW 564
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 135/277 (48%), Gaps = 22/277 (7%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ 90
+LK C LEE ++VHA+VLK GF +PF + LV A C + A +F +
Sbjct: 98 VLKACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCE-----DIVLASKVFDE 152
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
I + ++T+I G+ + EAL L+ +M + GV PD T ++ ACA AL G
Sbjct: 153 ITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTG 212
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+H ++ K E DL + +L+NMY KC +E A +F M K +WS++I A N
Sbjct: 213 KWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAIN 272
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL + L+ F M K +P + VLSAC H G + G+ S++
Sbjct: 273 GLAEDALEEFFRMEEAKV-KPNHVTFIGVLSACAHSGLVSEGRRYWSSML---------- 321
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
E ++ GC+ LC ++ D C L ++ IS
Sbjct: 322 EFGIVPSMELYGCMVDLLCRASLVEDACTLVETMPIS 358
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/550 (42%), Positives = 336/550 (61%), Gaps = 10/550 (1%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFL 118
+P A +L+ A + YA ++ ++ G D NT++R AL L
Sbjct: 735 HPLLAKHLLFHLAALRAPPLRYAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALEL 794
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ R PD T+P L +ACA+L AL+EG +H K GF +FVQNSL+++YG
Sbjct: 795 HRR---RLALPDTHTYPPLIQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGA 851
Query: 179 CEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
C E A +F +M +++ SW++++ + A+NG +E L +F EM + P+ +
Sbjct: 852 CGLFESAHKVFDEMPVRGRNLVSWNSMLNSFAANGRPNEVLTVFWEMLGVD-FAPDGFTI 910
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA- 295
VSVL+AC GAL LG+ H + + N V +LID+Y KCG + +F M
Sbjct: 911 VSVLTACAEFGALALGRRVHVYVEKVGLVENSHVSNALIDLYAKCGSVNDARRIFEEMGL 970
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ ++++ +I GLA +G GKEAL +FS M RE L P ++ VGVL ACSH GLV++G
Sbjct: 971 GRTVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFR 1030
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
FDRMK +Y I P ++H GC+VDL+GRAG + EA + I +MP++ N VVWR+LL + +H
Sbjct: 1031 YFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMH 1090
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
LE+G++A + L +++ H DYVLLSN+YA W DV +R M + ++PG SL
Sbjct: 1091 KKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSL 1150
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
VE+ VY+FV DRSHP + IYEM+ ++ +L+ EGY P S VL D++E+EK L
Sbjct: 1151 VELRNSVYEFVMGDRSHPESEQIYEMLAEIAERLRREGYIPRTSNVLADIEEEEKETALN 1210
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS++LAIAFAL+ G PIRI +NLRMC DCH LIS +Y+REIIVRDR RFH F+
Sbjct: 1211 YHSERLAIAFALLKSLPGIPIRIIKNLRMCGDCHVAFNLISKVYDREIIVRDRSRFHHFQ 1270
Query: 596 DGTCSCRDYW 605
G CSC+DYW
Sbjct: 1271 GGACSCKDYW 1280
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/610 (38%), Positives = 358/610 (58%), Gaps = 35/610 (5%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
+ + + ++ + L+E K++H ++ G N VA+ A+ + ++ Y+ I
Sbjct: 7 IAKHPTIALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQIL 66
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQA 146
Q +P F N++IR + K + ++ YN++ + + PDN+TF L + CA+ A
Sbjct: 67 DQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SA 125
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYG----------------------------- 177
+ G +HG + K GFE D V++ LI MY
Sbjct: 126 CEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKPDLVCQTTMVSA 185
Query: 178 --KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
KC + FA +F M Q+ SW+A+IA +A G E L LF M + + E
Sbjct: 186 CAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGV-KVNEVS 244
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
++SV++ACTHLGALD GK H + +N + V + T+L+DMY KCG +++ L +F M
Sbjct: 245 MISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMN 304
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+K T+S I GLAM+G G++ L +FS M EG+ P+++ ++ VL CS G V+EG
Sbjct: 305 EKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRS 364
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
FD MK ++ I P ++HYGC+VDL GRAG L EAL I +MP++ + W +LL+A +++
Sbjct: 365 HFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMY 424
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N+E+GE A++ L ++ + YV LSN+YA W V+ +R M ++G+++ PG S+
Sbjct: 425 KNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSV 484
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+EV +V++F S D+SHP++D I M ++ +LK GY + VL D++E+EK + L
Sbjct: 485 MEVNGEVHEFFSGDKSHPSYDVIETMWGEISKRLKLAGYVASTNSVLFDIEEEEKEDALC 544
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+K+AIAF L L +G PIRI +NLR+C DCH +K+IS I+EREIIVRDR RFH FK
Sbjct: 545 KHSEKMAIAFGLFSLKEGLPIRIVKNLRICWDCHDVSKMISKIFEREIIVRDRNRFHHFK 604
Query: 596 DGTCSCRDYW 605
DG CSC+D+W
Sbjct: 605 DGECSCKDFW 614
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 344/573 (60%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK+C + + + VH +++ G + + + L+ S +D +F +
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNM--YSKLLGIDSVRKVFELMP 167
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+NT+I G+ + +E+AL + EM ++PD FT ++ ++ + +G +
Sbjct: 168 RKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKE 227
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IHG+V + G + D+++ +SL++MY K ++E + +F + ++ SW++++A + NG
Sbjct: 228 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGR 287
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++E L+LF +M + K RP SV+ AC HL L LGK HG ++R N+ + +
Sbjct: 288 YNEALRLFRQMVSAKV-RPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIAS 346
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG ++ +F M +++++ +I G A+HG G EA+S+F EM R+G++P
Sbjct: 347 ALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 406
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V +V VL+ACSH GLV+E F+ M Y + ++HY V DL+GRAG L EA +
Sbjct: 407 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDF 466
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I M ++ VW +LLS+ VH NLE+ E A+ +F I+S + YVL+ NMYA RW
Sbjct: 467 ISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRW 526
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
++AK+R + KGL + P S +E+ K + FVS DRSHP+ D I E + + Q++ E
Sbjct: 527 KEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKE 586
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY D S VL DVDE+ KRE L GHS++LA+AF +I+ G+ IR+ +N+R+C DCH
Sbjct: 587 GYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAI 646
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I EREIIVRD RFH F G+CSC DYW
Sbjct: 647 KFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 171/332 (51%), Gaps = 3/332 (0%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F+ ++ P + ++IR F + F AL + EM G PD+ FP++ K+C
Sbjct: 58 ALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTM 117
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+ L+ G +HG + ++G +CDL+ N+L+NMY K ++ +F+ M +K V S++ +
Sbjct: 118 MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTV 177
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA +A +G++ + L++ EM +P+ L SVL + + GK HG +IR
Sbjct: 178 IAGYAQSGMYEDALRMVREMGTSDL-KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG 236
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+V + +SL+DMY K +E +F + + ++++ +++G +G+ EAL +F
Sbjct: 237 IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M+ + P V + V+ AC+H ++ G + L + +VD+ +
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYV-LRGGFGRNIFIASALVDMYSKC 355
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G + A ++ M + ++V W +++ +H
Sbjct: 356 GNIQAARKIFDRMNL-HDEVSWTAIIMGHALH 386
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 4/207 (1%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L K ++++ + Q+H + + +I++Y + + A +FK ++
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLESP 68
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKC 254
V +W ++I L+S L F EM + +C P+ ++ SVL +CT + L G+
Sbjct: 69 PVLAWKSVIRCFTDQSLFSRALASFVEMRASGRC--PDHNVFPSVLKSCTMMMDLRFGES 126
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG ++R ++ +L++MY K ++ +F +M K ++Y+ +I+G A G
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGM 186
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVL 341
++AL + EM L+PD VL
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVL 213
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 31/194 (15%)
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
++++ +++ T + + K H IR S L+ + +I +Y L + L +F+
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRTQS-LSHTSASIVISIYTNLKLLHEALLVFK 63
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS------- 345
+ L + +I AL+ F EM G PD V+ VL +C+
Sbjct: 64 TLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 346 ----HAGLVNEGLLC-----------------FDRMKLEYRIVP--TVQHYGCVVDLMGR 382
H +V G+ C D ++ + ++P V Y V+ +
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQ 183
Query: 383 AGMLGEALELIQSM 396
+GM +AL +++ M
Sbjct: 184 SGMYEDALRMVREM 197
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 347/570 (60%), Gaps = 4/570 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L++ L ++VHAH++ G + + L++ + GS+ YA +F + P +
Sbjct: 97 LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTA--GSITYARRLFPTVPNPDS 154
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F F++L++ K + + Y M G N+TF ++ KACA L AL+ G +IH H
Sbjct: 155 FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSH 214
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V G+ D++VQ +LI +Y K ++ A +F M Q+++ +W+++I+ + NGL E
Sbjct: 215 VMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQES 274
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ LF M E ++P+ + +VS+LS+C+ LGALD G H N LNV++ TSLI+
Sbjct: 275 IGLFHLMM-ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 333
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY +CG + K +F M ++ +T++ MISG MHG G++A+ +F+EM G P+++
Sbjct: 334 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 393
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS- 395
+V VLSAC+H+GL+++G F MK Y +VP V+H C+VD+ GRAG+L +A + I+
Sbjct: 394 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 453
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
+P + VW S+L A ++H N ++G A+++ + +P YV+LSN+YA A R V
Sbjct: 454 IPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRV 513
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
+R M + L + G+S +E+ RK Y F D+SHP + IY + ++ + GY
Sbjct: 514 EMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYV 573
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P ++ D++E+E+ L+ HS+KLA+AF L+ +QG IRI +NLR+C DCH+ K I
Sbjct: 574 PAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHI 633
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S+I +REIIVRD+ RFH FKDG+CSC DYW
Sbjct: 634 SIIADREIIVRDKFRFHHFKDGSCSCLDYW 663
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/570 (38%), Positives = 347/570 (60%), Gaps = 4/570 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L++ L ++VHAH++ G + + L++ + GS+ YA +F + P +
Sbjct: 33 LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTA--GSITYARRLFPTVPNPDS 90
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F F++L++ K + + Y M G N+TF ++ KACA L AL+ G +IH H
Sbjct: 91 FLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSH 150
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V G+ D++VQ +LI +Y K ++ A +F M Q+++ +W+++I+ + NGL E
Sbjct: 151 VMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQES 210
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ LF M E ++P+ + +VS+LS+C+ LGALD G H N LNV++ TSLI+
Sbjct: 211 IGLFHLMM-ESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLIN 269
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY +CG + K +F M ++ +T++ MISG MHG G++A+ +F+EM G P+++
Sbjct: 270 MYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNIT 329
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS- 395
+V VLSAC+H+GL+++G F MK Y +VP V+H C+VD+ GRAG+L +A + I+
Sbjct: 330 FVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKF 389
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
+P + VW S+L A ++H N ++G A+++ + +P YV+LSN+YA A R V
Sbjct: 390 IPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRV 449
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
+R M + L + G+S +E+ RK Y F D+SHP + IY + ++ + GY
Sbjct: 450 EMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYV 509
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P ++ D++E+E+ L+ HS+KLA+AF L+ +QG IRI +NLR+C DCH+ K I
Sbjct: 510 PAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHI 569
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S+I +REIIVRD+ RFH FKDG+CSC DYW
Sbjct: 570 SIIADREIIVRDKFRFHHFKDGSCSCLDYW 599
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/586 (40%), Positives = 354/586 (60%), Gaps = 21/586 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLK--WGFFWNPFCASNLVATC------ALSHWGSMDYACS 86
L L C +L ++HA +K G +P + L+ C A +H + YA
Sbjct: 32 LAYLPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAH---LAYARQ 88
Query: 87 IFRQIDEPGAFD-FNTLIRGFVKEVEF----EEALFLYNEMFERGVEPDNFTFPALFKAC 141
+F +I PG +NTL+RG+ + EEA ++ M E GV PD +TF +L KAC
Sbjct: 89 VFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKAC 148
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A +A +EG Q HG K G +V +LINMY +C V A +F +MD + V S++
Sbjct: 149 ASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYN 208
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+I A + L E L LF EM K +P L+SVLSAC LGAL+LG+ H IR
Sbjct: 209 AMITASVRSSLPGEALVLFREMQ-AKGLKPTSVTLISVLSACALLGALELGRWIH-DYIR 266
Query: 262 NISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ +++ V T+LIDMY KCG LE + +F+ M + + +SVM+ A HG G+EA+S
Sbjct: 267 KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAIS 326
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM ++G++PDDV ++GVL ACSH+G+V+EGL FD M+ EY IV ++HYGCV DL+
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLL 385
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
R+G L A + I +PI+ ++WR+LLSA H ++++G+ + + +++ H DYV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
+ SN+ A RW ++ +R M+ KG+ + PG S +E+ V++F + D SHP
Sbjct: 446 IFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARR 505
Query: 501 MIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
M+ ++ QLK GY P+ S V ++ E+EK L+ HS+KLAI+F L++ + G+ +RI
Sbjct: 506 MVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIV 565
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ KL+S+++ R II+RD RFH F+DG CSC DYW
Sbjct: 566 KNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/595 (40%), Positives = 340/595 (57%), Gaps = 39/595 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++ HA ++ G N F A+ +VA A S G +D A +F +ID P + +N++IR +
Sbjct: 97 QQAHAQIVLHGLQPNAFLAAKMVAMYASS--GDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154
Query: 108 KE---VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+ L Y M G+ DNFT P + K+CA L + G +HG +VG E
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEG 214
Query: 165 DLFVQNSLINMYGKCE-------------------------------KVEFASAIFKQMD 193
D +V SLI+MY KC ++ A +F++M+
Sbjct: 215 DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME 274
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLG 252
+++ SW+A+I+ + NG + L LF EM + +P +VSVL AC AL+ G
Sbjct: 275 HRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERG 334
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD--KCQLTYSVMISGLA 310
+ H LN V+T+L MY KC L + C F M+A K + ++ MI+ A
Sbjct: 335 RRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYA 394
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
HG G EA+SIF MLR G++PD V ++G+LS CSH+GL++ GL F+ M + + P V
Sbjct: 395 SHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRV 454
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HY CVVDL+GRAG L EA ELI MP+Q VW +LL+A + H NLEI E+AA+ LF
Sbjct: 455 EHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFV 514
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
+ + +YVLLSN+YA A W +V K+R + +G+ +SPG S +E+ K + F+ D+
Sbjct: 515 LEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADK 574
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
SHP IY+ + + ++K GY PD S VL D+ E+EK L HS+KLAIAF L++
Sbjct: 575 SHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNT 634
Query: 551 SQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G +R+ +NLR+C DCH TK IS IYEREIIVRD RFH FKDG+CSC DYW
Sbjct: 635 RPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P ++ +F+ + +K G Q H + G + + F+ ++ MY ++ A +
Sbjct: 75 PHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134
Query: 189 FKQMDQKSVASWSAIIAAHASNG---LWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
F ++D S +++II A+ +G L+ + M+ + L VL +C
Sbjct: 135 FDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLG-DNFTLPFVLKSCAD 193
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL--------------------- 284
L + +G+C HG +R + V SLIDMYVKCG +
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253
Query: 285 --------EKGLC--LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEP 332
E G+ LF M + ++++ MISG +G ++AL +F EML++G ++P
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMK-LEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+ V V VL AC+ + + G D + + +VQ AGM +
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQ--------TALAGMYAKCYS 365
Query: 392 LIQS-----MPIQ--QNDVVWRSLLSASKVH 415
L+++ M Q +N + W ++++A H
Sbjct: 366 LVEARCCFDMIAQNGKNLIAWNTMITAYASH 396
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/557 (41%), Positives = 337/557 (60%), Gaps = 3/557 (0%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH +V+K G + F ++ L+ S +G + A +F ++ +N++I + +
Sbjct: 270 VHLYVIKHGLESDVFVSNALINM--YSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQN 327
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF-ECDLFV 168
+ AL + EM G+ PD T +L +L + G +HG V + + E D+ +
Sbjct: 328 DDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVI 387
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+L+NMY K ++ A A+F+Q+ + V SW+ +I +A NGL SE + + M +
Sbjct: 388 GNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRT 447
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P + VS+L A +H+GAL G HG LI+N L+V V T LIDMY KCG LE +
Sbjct: 448 IVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAM 507
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
LF + + + ++ +IS L +HG G++AL +F +M +G++ D + +V +LSACSH+G
Sbjct: 508 SLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSG 567
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV+E CFD M+ EYRI P ++HYGC+VDL GRAG L +A L+ +MPIQ + +W +L
Sbjct: 568 LVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTL 627
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L+A ++H N E+G A+ L +++S + YVLLSN+YA +W K+R+ +GL
Sbjct: 628 LAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLR 687
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
++PG+S V V V F + ++SHP IYE + + ++K GY PD S VL+DV+ED
Sbjct: 688 KTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEED 747
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK E L HS++LAI F +I SPIRI +NLR+C DCH TK IS I EREIIVRD
Sbjct: 748 EKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDS 807
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH FKDG CSC DYW
Sbjct: 808 NRFHHFKDGICSCGDYW 824
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 206/391 (52%), Gaps = 19/391 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C +L + +K+H VLK GF + + A++L+ S +G+++ A +F +
Sbjct: 156 VLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHL--YSRFGAVEVAHKVFVDMPVRDV 213
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I GF + EAL + + M V+ D T ++ CA+ + G+ +H +
Sbjct: 214 GSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLY 273
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G E D+FV N+LINMY K +++ A +F M+ + + SW++IIAA+ N
Sbjct: 274 VIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTA 333
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLI 275
L F EM RP+ +VS+ S L +G+ HG ++R +++++ +L+
Sbjct: 334 LGFFKEMLFVGM-RPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALV 392
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEPD 333
+MY K G ++ +F + + ++++ +I+G A +G EA+ ++ M+ EG + P+
Sbjct: 393 NMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYN-MMEEGRTIVPN 451
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT-----VQHYGCVVDLMGRAGMLGE 388
+V +L A SH G + +G MK+ R++ V C++D+ G+ G L +
Sbjct: 452 QGTWVSILPAYSHVGALQQG------MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLED 505
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A+ L +P Q+ V W +++S+ +H + E
Sbjct: 506 AMSLFYEIP-QETSVPWNAIISSLGIHGHGE 535
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 155/307 (50%), Gaps = 7/307 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+ ++C N+ K++HA +L G + + LV A G + + + F+ I
Sbjct: 57 VFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYAT--LGDLSLSSTTFKHIQRKNI 114
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +N+++ +V+ + +++ E+ GV PD +TFP + KAC +L +G ++H
Sbjct: 115 FSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHC 171
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
V K+GFE D++V SLI++Y + VE A +F M + V SW+A+I+ NG +E
Sbjct: 172 WVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAE 231
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L++ M E+ + + + S+L C + G H +I++ +V V +LI
Sbjct: 232 ALRVLDRMKTEEV-KMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
+MY K G L+ +F M + ++++ +I+ + AL F EML G+ PD +
Sbjct: 291 NMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLL 350
Query: 336 VYVGVLS 342
V + S
Sbjct: 351 TVVSLAS 357
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 8/278 (2%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F +F++C + K Q+H + +G D+ + L+ +Y + +S FK +
Sbjct: 54 FNLVFRSCTNINVAK---QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+K++ SW+++++A+ G + + + E+ + RP+ VL AC L G+
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GE 167
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H +++ +V V SLI +Y + G +E +F M + +++ MISG +G
Sbjct: 168 KMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNG 227
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
EAL + M E ++ D V +L C+ + V G+L + +++ + V
Sbjct: 228 NVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYV-IKHGLESDVFVS 286
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++++ + G L +A + M + ++ V W S+++A
Sbjct: 287 NALINMYSKFGRLQDAQRVFDGMEV-RDLVSWNSIIAA 323
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/683 (36%), Positives = 365/683 (53%), Gaps = 84/683 (12%)
Query: 1 MTRTSVLHQSLLLTQPEEPPK------------GPELNLRLKEQECLTILKTCKNLEEFK 48
M+++ L L +P PP GP R E + ++ L +
Sbjct: 1 MSKSQGLKALNALFKPTSPPAKTTTVTTTTRAHGPS---RSPETHFIPLIHASNTLPQLH 57
Query: 49 KVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++HA + F N + L+++ C+L S+DYA SIFR D P F FN LIRG
Sbjct: 58 QIHAQIFLHNLFSNSRVVTQLISSSCSLK---SLDYALSIFRCFDHPNLFVFNALIRGLA 114
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ FE ++ + M + PD T P + K+ A L + G +HG V K+G E D F
Sbjct: 115 ENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSF 174
Query: 168 VQNSLINMYGKCEKVEF-----------------------------------ASAIFKQM 192
V+ SL++MY K ++ F A+++F+ M
Sbjct: 175 VRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAM 234
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCW--------------------- 229
+++ SW+++I NG +LF +M N W
Sbjct: 235 PERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFW 294
Query: 230 -------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
RP + +VS L ACT +GAL +G+ H L N LN + T+L+DMY KCG
Sbjct: 295 RMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCG 354
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
++ +F K LT+SVMI G A+HG +AL F +M G+ PD+V+++ +L+
Sbjct: 355 NIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILT 414
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSH+G V++GL F+ M+L+Y I PT++HY +VDL+GRAG L EAL IQSMPI +
Sbjct: 415 ACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDF 474
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
V+W +L A + H N+E+ E+ A+ L Q+ HP YV LSN+YA RW DV ++RT M
Sbjct: 475 VIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLM 534
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
++G+ + PG+S +EV +V+ FV+ D +H + I + ++ K EGY P+ + VL
Sbjct: 535 KNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVL 594
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
+++E+EK + L HS+KLA+AF LI + GS IRI +NLR+C DCH+ K S + RE
Sbjct: 595 HNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRRE 654
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
II+RD KRFH FKDGTCSC DYW
Sbjct: 655 IILRDIKRFHHFKDGTCSCGDYW 677
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/579 (40%), Positives = 351/579 (60%), Gaps = 13/579 (2%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+K+C L + + H +GF + F +S L+ S G + A ++F +I
Sbjct: 1149 IKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDM--YSKCGQLKDARALFDEIPLR 1206
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP--------DNFTFPALFKACAKLQA 146
+ ++I G+V+ + + AL L+ + E E D+ ++ AC+++
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 1266
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+HG V K GF+ + V N+L++ Y KC + + +F M++K SW+++IA
Sbjct: 1267 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 1326
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+A +GL E L++F M R L +VL AC H GAL GKC H +I+
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV V TS+IDMY KCG +E F M +K +++ M++G MHG+ KEAL IF +M+
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
R G++P+ + +V VL+ACSHAGLV EG F+ MK +Y I P ++HYGC+VDL GRAG L
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCL 1506
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
EA LI+ M ++ + VVW SLL A ++H N+++GEIAA+ LF+++ + YVLLSN+Y
Sbjct: 1507 NEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLY 1566
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A A RW DV ++R M ++ L + PGFSLVE+ +V+ F+ D+ HP + IY+ + ++
Sbjct: 1567 ADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLT 1626
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+L+ GY P+++ VL DVDE+EK L+ HS+KLA+AF +++ + G+ I I +NLR+C
Sbjct: 1627 LELQKIGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCG 1686
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCHT KLIS + R+ +VRD KRFH FKDG CSC DYW
Sbjct: 1687 DCHTVIKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 208/403 (51%), Gaps = 36/403 (8%)
Query: 20 PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P P N+R K+ L +L+ CKN + +++HA +++ G + L+ S G
Sbjct: 18 PLTPRGNIRAKK--ALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHL--YSTHG 73
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ YA +F QI P F +N +IR E+AL LY M +G+ D FTFP + K
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM------- 192
AC ++ G +HG + K GF D+FVQN+LI+ Y KC FA +F++M
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 193 ------------------------DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
K+V SW+A+I + N E L+LF M E
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+ P E +VS++ ACT +G L LG+ H I+N + V + T+LIDMY KCG ++ +
Sbjct: 254 F-PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M K T++ MI+ L +HG G+EAL++FSEM R ++PD + ++GVL AC H
Sbjct: 313 EVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIK 372
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
V EG F RM Y I P +HY C+ +L R+ L EA +
Sbjct: 373 NVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 174/347 (50%), Gaps = 16/347 (4%)
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S + A ++ +D+ +N++I + + EAL ++ + + G+ P +FP K
Sbjct: 1091 SSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 1150
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
+C+ L L G H F GFE DLFV ++LI+MY KC +++ A A+F ++ ++V S
Sbjct: 1151 SCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS 1210
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCW------RPEES-ILVSVLSACTHLGALDLG 252
W+++I + N L LF + E+ P +S ++VSVLSAC+ + +
Sbjct: 1211 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGIT 1270
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ HG +++ ++ V +L+D Y KCG +F M +K ++++ MI+ A
Sbjct: 1271 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 1330
Query: 313 GQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVP 368
G EAL +F M+R G+ + V VL AC+HAG + G D +M LEY +
Sbjct: 1331 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 1390
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++D+ + G + A + M ++N W ++++ +H
Sbjct: 1391 GTS----IIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMH 1432
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L + C + L+ QIH + + G D + LI++Y ++ +A +F Q+
Sbjct: 33 LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+W+ II A+ NGL + L L+ M + ++ V+ ACT+ ++DLGK H
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGI-AADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG--- 313
GSLI+ + +V V+ +LID Y KCG L +F M + ++++ +ISGL G
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 314 ----------------------------QGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
Q +EAL +F M E + P++ V ++ AC+
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
G++ G D ++ I V ++D+ + G + +A+E+ ++MP +++ W
Sbjct: 269 EMGILTLGRGIHD-YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTW 326
Query: 406 RSLLSASKVH 415
S++++ VH
Sbjct: 327 NSMITSLGVH 336
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/565 (40%), Positives = 348/565 (61%), Gaps = 14/565 (2%)
Query: 51 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEV 110
H +GF + F +S L+ S G + A ++F +I + ++I G+V+
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDM--YSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 2095
Query: 111 EFEEALFLYNEMFERGVEP--------DNFTFPALFKACAKL--QALKEGMQIHGHVFKV 160
+ + AL L+ + E E D+ ++ AC+++ + + EG +HG V K
Sbjct: 2096 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKK 2153
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
GF+ + V N+L++ Y KC + + +F M++K SW+++IA +A +GL E L++F
Sbjct: 2154 GFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M R L +VL AC H GAL GKC H +I+ NV V TS+IDMY K
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG +E F M +K +++ M++G MHG+ KEAL IF +M+R G++P+ + +V V
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 2333
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L+ACSHAGLV EG F+ MK +Y I P ++HYGC+VDL GRAG L EA LI+ M ++
Sbjct: 2334 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 2393
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
+ VVW SLL A ++H N+++GEIAA+ LF+++ + YVLLSN+YA A RW DV ++R
Sbjct: 2394 DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRM 2453
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M ++ L + PGFSLVE+ +V+ F+ D+ HP + IY+ + ++ +L+ GY P+++
Sbjct: 2454 LMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTS 2513
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL DVDE+EK L+ HS+KLA+AF +++ + G+ I I +NLR+C DCHT KLIS +
Sbjct: 2514 VLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISKLVH 2573
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +VRD KRFH FKDG CSC DYW
Sbjct: 2574 RDFVVRDSKRFHHFKDGVCSCGDYW 2598
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 208/403 (51%), Gaps = 36/403 (8%)
Query: 20 PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P P N+R K+ L +L+ CKN + +++HA +++ G + L+ S G
Sbjct: 18 PLTPRGNIRAKK--ALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHL--YSTHG 73
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ YA +F QI P F +N +IR E+AL LY M +G+ D FTFP + K
Sbjct: 74 RIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM------- 192
AC ++ G +HG + K GF D+FVQN+LI+ Y KC FA +F++M
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS 193
Query: 193 ------------------------DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
K+V SW+A+I + N E L+LF M E
Sbjct: 194 WTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+ P E +VS++ ACT +G L LG+ H I+N + V + T+LIDMY KCG ++ +
Sbjct: 254 F-PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M K T++ MI+ L +HG G+EAL++FSEM R ++PD + ++GVL AC H
Sbjct: 313 EVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIK 372
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
V EG F RM Y I P +HY C+ +L R+ L EA +
Sbjct: 373 NVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 173/345 (50%), Gaps = 16/345 (4%)
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
+ A ++ +D+ +N++I + + EAL ++ + + G+ P +FP K+C
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 2025
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ L L G H F GFE DLFV ++LI+MY KC +++ A A+F ++ ++V SW+
Sbjct: 2026 SALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCW------RPEES-ILVSVLSACTHLGALDLGKC 254
++I + N L LF + E+ P +S ++VSVLSAC+ + + +
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG +++ ++ V +L+D Y KCG +F M +K ++++ MI+ A G
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205
Query: 315 GKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTV 370
EAL +F M+R G+ + V VL AC+HAG + G D +M LEY +
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++D+ + G + A + M ++N W ++++ +H
Sbjct: 2266 S----IIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMH 2305
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L + C + L+ QIH + + G D + LI++Y ++ +A +F Q+
Sbjct: 33 LLQNCKNFKHLR---QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+W+ II A+ NGL + L L+ M + ++ V+ ACT+ ++DLGK H
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGI-AADKFTFPFVIKACTNFLSIDLGKVVH 148
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG--- 313
GSLI+ + +V V+ +LID Y KCG L +F M + ++++ +ISGL G
Sbjct: 149 GSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQ 208
Query: 314 ----------------------------QGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
Q +EAL +F M E + P++ V ++ AC+
Sbjct: 209 EARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACT 268
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
G++ G D ++ I V ++D+ + G + +A+E+ ++MP +++ W
Sbjct: 269 EMGILTLGRGIHD-YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTW 326
Query: 406 RSLLSASKVH 415
S++++ VH
Sbjct: 327 NSMITSLGVH 336
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
G+ + A+ +K +D+ +V SW+++IA A G E L+ F + P S
Sbjct: 1960 GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSF 2018
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+ +C+ L L G+ +H ++ V ++LIDMY KCG L+ LF +
Sbjct: 2019 PCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL 2078
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD--------VVYVGVLSACS 345
+ ++++ MI+G + Q AL +F + L E E +D VV V VLSACS
Sbjct: 2079 RNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 352/572 (61%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + + K+H V+K GF + F ++LV C + G ++ A +F I +
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLV--CLYAKCGYLEDAHKVFDDIPD 175
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +I G++ +F EA+ ++ + E + PD+FT + AC +L L G I
Sbjct: 176 KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWI 235
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H + ++G ++FV SL++MY KC +E A ++F M +K + SW A+I +A NGL
Sbjct: 236 HKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLP 295
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E + LF +M E +P+ +V VLSAC LGAL+LG+ G + RN N ++ T+
Sbjct: 296 KEAIDLFLQMQRENV-KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTA 354
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LID+Y KCG + + +F+ M +K ++ ++ +ISGLAM+G K + +F ++ + G++PD
Sbjct: 355 LIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPD 414
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++G+L C+HAGLV+EG F+ M + + P+++HYGC+VDL+GRAG+L EA +LI
Sbjct: 415 GNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLI 474
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
++MP++ N +VW +LL A ++H + ++ E+A K L ++ + +YVLLSN+Y+ +W
Sbjct: 475 RNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWD 534
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ AK+R M K + + PG S +EV V++F+ D+ HP + IY + ++ ++K G
Sbjct: 535 EAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAG 594
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y P VL D++E+EK L HS+KLAIAF LI + + IR+ +NLR+C DCH K
Sbjct: 595 YVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIK 654
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I REI VRD RFH F++G+CSC DYW
Sbjct: 655 LISSITGREITVRDNNRFHCFREGSCSCNDYW 686
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 230/415 (55%), Gaps = 23/415 (5%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
+L++P PP L ++ IL+ + + K +HAH+L++G + + N++
Sbjct: 1 MLSRPTSPPISKGLEIKK------LILQGFNSFKHLKHLHAHLLRFGLCHDNYLL-NMIL 53
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
C+ + +Y +F QI +P F +NT+IRG V F++A+ Y M G P+N
Sbjct: 54 RCSFD-FSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNN 112
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
FTFP + KACA+L L+ G++IH V K GF+CD+FV+ SL+ +Y KC +E A +F
Sbjct: 113 FTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDD 172
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFG---EMNNEKCWRPEESILVSVLSACTHLGA 248
+ K+V SW+AII+ + G + E + +F EMN P+ +V VLSACT LG
Sbjct: 173 IPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMN----LAPDSFTIVRVLSACTQLGD 228
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L+ G+ H ++ NV V TSL+DMY KCG +EK +F M +K +++ MI G
Sbjct: 229 LNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQG 288
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC---FDRMKLEYR 365
A++G KEA+ +F +M RE ++PD VGVLSAC+ G + G DR + Y
Sbjct: 289 YALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYN 348
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
V ++DL + G + A E+ + M +++ VVW +++S ++ ++I
Sbjct: 349 PVLGTA----LIDLYAKCGSMSRAWEVFKGMK-EKDRVVWNAIISGLAMNGYVKI 398
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/625 (37%), Positives = 371/625 (59%), Gaps = 38/625 (6%)
Query: 16 PEEPPKGPELNLRLKEQECLTI--LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC 73
P+ P + N++ + E L I L+ + E ++VHA ++K + + + C
Sbjct: 11 PQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVC 70
Query: 74 ALSHWGSMDYACSIFRQIDE--PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
A + S YA IF+ +++ P F +N+ ++ + +A+ L+ + + V PD
Sbjct: 71 AFT--PSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDT 128
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV--------- 182
FT ++ +AC L L G +HG V KVGF +L++QN ++++Y C ++
Sbjct: 129 FTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEK 188
Query: 183 ----------------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
E A +F +M +++V SW+++IA + G E + LF
Sbjct: 189 MPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLF 248
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+M E + E +V+VL+AC LGALDLG H R+ NV + +LIDMYVK
Sbjct: 249 AKM-EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 307
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CGCLE+ +F M ++ +++S MI GLAMHG+ +EAL +FS+M + G+EP+ V ++G+
Sbjct: 308 CGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGL 367
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L ACSH GL++EG F M +Y I+P ++HYGC+VDL+ RAG+L EA E I +MP++
Sbjct: 368 LHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKP 427
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N VVW +LL A +VH N+E+ E A K+L +++ + YV+LSN+YA A RW D A++R
Sbjct: 428 NGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRK 487
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M + + ++PG+S + V V++FV+ + SHP + I++ ++ +++ +GY P+ S
Sbjct: 488 FMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSV 547
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL D++E EK + + HS+KLA+ F L++ +PIRI +NLR+C DCH+ KLIS I
Sbjct: 548 VLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSAFKLISAIVN 607
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REI+VRDR RFH F D +CSCRDYW
Sbjct: 608 REIVVRDRNRFHCFNDNSCSCRDYW 632
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/594 (40%), Positives = 357/594 (60%), Gaps = 24/594 (4%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIF 88
Q ++ +TC ++ + K++HA L+ + P F ++ S + ++YA +F
Sbjct: 40 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 97
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQA 146
I+ +F +NTLIR +V EEA LY +M ERG PD TFP + KACA +
Sbjct: 98 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 157
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
EG Q+H + K GF D++V N LI++YG C ++ A +F +M ++S+ SW+++I A
Sbjct: 158 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 217
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-- 264
G + L+LF EM ++ + P+ + SVLSAC LG+L LG H L+R
Sbjct: 218 LVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 275
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
A++V+V+ SLI+MY KCG L +F+ M + +++ MI G A HG+ +EA++ F
Sbjct: 276 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 335
Query: 324 EML--REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
M+ RE + P+ V +VG+L AC+H G VN+G FD M +Y I P ++HYGC+VDL+
Sbjct: 336 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 395
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD-- 438
RAG + EA++++ SMP++ + V+WRSLL A K ++E+ E A+N+ + S
Sbjct: 396 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNG 455
Query: 439 -----YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
YVLLS +YA A RW DV +R M+ G+ + PG S +E+ ++F + D SHP
Sbjct: 456 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 515
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRE-RLKGHSQKLAIAFALIHLS 551
IY+ + ++ +L+ GY PD SQ L D D +E L+ HS++LAIAF LI+L
Sbjct: 516 QTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLP 575
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+PIRI +NLR+CNDCH TKLIS ++ EIIVRDR RFH FKDG+CSC DYW
Sbjct: 576 PQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 629
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/506 (41%), Positives = 323/506 (63%), Gaps = 1/506 (0%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N++IR + + ++F+Y +M++ G+ PD+ TFP + K+ A+L + G IH + +
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+GFE +++V +L+NMYG C V A +F ++ +++ SW+A+I + N ++ + + +
Sbjct: 171 MGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDV 230
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F EM +P E +V VL AC HLGAL+ G+ + N LNV V T+LIDMY
Sbjct: 231 FREMQIAGA-KPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYA 289
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG +++ +F+ M K T++V+ISG AM+G+G+ AL FS M+ E +PD+V ++G
Sbjct: 290 KCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLG 349
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
VL AC H GLVNEG F MK E+ + P ++HYGC+VDL+GRAG L EA +LIQ+M +Q
Sbjct: 350 VLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSMQ 409
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ ++WR LL A ++H N+++GE A K L ++ ++ +YVLL+N+YAR QRW V ++R
Sbjct: 410 PDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEVR 469
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M + + + PG S +E+ VY+FV + P ++ +Y+++ M +LK GY D
Sbjct: 470 EMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYIKPGFEEVYKLLADMNKKLKLAGYVADTG 529
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
D++E+EK L HS+KLA+AF L+ G +RI +NLR+C DCH + K++S +Y
Sbjct: 530 MASYDIEEEEKEHSLMYHSEKLALAFGLLKSPSGLTLRIVKNLRICQDCHGFFKIVSKVY 589
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
R+I VRDR RFH F G CSC+DYW
Sbjct: 590 RRDISVRDRNRFHHFVGGACSCKDYW 615
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 136/268 (50%), Gaps = 15/268 (5%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
T+LK+ L E K +H +++ GF N + ++ N+ TC+ S+ A +F
Sbjct: 147 TVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCS-----SVSDARQVFD 201
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+I + +N LI G+ F + + ++ EM G +P T + ACA L AL +
Sbjct: 202 EIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQ 261
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G I ++ ++FV +LI+MY KC V+ A IFK M K+V +W+ +I+ +A
Sbjct: 262 GRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAM 321
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG L+ F M EK ++P+E + VL AC H G ++ G+ T+ + ++ L
Sbjct: 322 NGRGESALQAFSRMIMEK-FKPDEVTFLGVLCACCHQGLVNEGR-TYFTSMKEEFGLRPR 379
Query: 270 VE--TSLIDMYVKCGCLEKGLCLFRMMA 295
+E ++D+ + G L++ L + M+
Sbjct: 380 IEHYGCMVDLLGRAGFLDEAQQLIQAMS 407
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/594 (40%), Positives = 357/594 (60%), Gaps = 24/594 (4%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIF 88
Q ++ +TC ++ + K++HA L+ + P F ++ S + ++YA +F
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 106
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQA 146
I+ +F +NTLIR +V EEA LY +M ERG PD TFP + KACA +
Sbjct: 107 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
EG Q+H + K GF D++V N LI++YG C ++ A +F +M ++S+ SW+++I A
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 226
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-- 264
G + L+LF EM ++ + P+ + SVLSAC LG+L LG H L+R
Sbjct: 227 LVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
A++V+V+ SLI+MY KCG L +F+ M + +++ MI G A HG+ +EA++ F
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 324 EML--REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
M+ RE + P+ V +VG+L AC+H G VN+G FD M +Y I P ++HYGC+VDL+
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD-- 438
RAG + EA++++ SMP++ + V+WRSLL A K ++E+ E A+N+ + S
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNG 464
Query: 439 -----YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
YVLLS +YA A RW DV +R M+ G+ + PG S +E+ ++F + D SHP
Sbjct: 465 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 524
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRE-RLKGHSQKLAIAFALIHLS 551
IY+ + ++ +L+ GY PD SQ L D D +E L+ HS++LAIAF LI+L
Sbjct: 525 QTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLP 584
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+PIRI +NLR+CNDCH TKLIS ++ EIIVRDR RFH FKDG+CSC DYW
Sbjct: 585 PQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/595 (40%), Positives = 349/595 (58%), Gaps = 15/595 (2%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA- 71
+ Q + P P NL +L+ L+ +VHAHV+ G+ + F + L+
Sbjct: 3 IKQHHKHPHSPAYNL---------LLQAGPRLKLLHQVHAHVIVSGYGCSRFLLTKLLNL 53
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPD 130
CA GS+ Y IF + P +F F +LIR K F +L+ Y M V P
Sbjct: 54 ACAA---GSISYTRQIFLIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPS 110
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
N+TF ++ K+CA L AL+ G IHGHV GF D++VQ +L++ YGKC + A +F
Sbjct: 111 NYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFD 170
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+M +SV +W+++I+ + NG E ++LF M E P + VSVLSAC HLGA
Sbjct: 171 KMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMK-EIGVEPNSATFVSVLSACAHLGAFI 229
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
LG H + N LNV++ TSLI+MY +CG + K +F M ++ + ++ MISG
Sbjct: 230 LGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYG 289
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
+G G +A+ +F EM R GL P+ + +V VLSAC+HAGLVNEG F+ M+ EYR+VP V
Sbjct: 290 TNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEV 349
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+H+ C+VD++GRAG+L EA I+ + + +W ++L A K+H N +G A++
Sbjct: 350 EHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLA 409
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
+P+ YV+LSN+YA A R V +R M K L + G+S +++ RK Y F D+
Sbjct: 410 SEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDK 469
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
SH + IY + Q+ + + GY V+ +++E+E+ L HS+KLAIAF L+
Sbjct: 470 SHTETNEIYHYLDQLMRKCREAGYVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKT 529
Query: 551 SQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S+G+ IRI +NLRMC DCH+ K ISVI REIIVRD+ RFH FK+G+CSC DYW
Sbjct: 530 SRGTVIRIVKNLRMCEDCHSAIKYISVISNREIIVRDKLRFHHFKNGSCSCLDYW 584
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/583 (41%), Positives = 352/583 (60%), Gaps = 19/583 (3%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---DYACSIFRQIDEP 94
L CK++ + K++HA L+ P ++ L + H+ S+ +YA +F Q+D P
Sbjct: 29 LNECKDMSQLKQIHALSLRSTL---PNHSTTLFLYSRILHFSSLHDLNYAYRVFDQVDNP 85
Query: 95 GAFDFNTLIRGFVKEVEF---EEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKEG 150
+F +N LIR + EA+ LYN M +R PDN TFP + KACA L AL EG
Sbjct: 86 NSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFALFEG 145
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q H H+ K+GF+ D+++ NSLI+ Y C +E A +F +M Q+S+ SW+A+I A
Sbjct: 146 KQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAFVLF 205
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN----ISAL 266
G + E ++ + P+ + SV++AC L AL LG H L+RN ++
Sbjct: 206 GEF-ETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVARD 264
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V+V SL+DMY KCG L+ +F M +++ MI G AMHG+G+ AL F M+
Sbjct: 265 HVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFERMI 324
Query: 327 R-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
R P+ + +VGVLSAC+H +VNEG FD M EY+I P ++HYGC+VD++ RAG+
Sbjct: 325 RISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARAGL 384
Query: 386 LGEALELIQSMPIQQNDVVWRSLL-SASKVHHNLEIGEIAAKNLFQINSHHPSD-YVLLS 443
+ EALEL+ SMP++ + V+WRSLL S K + ++E+ E A+ + + S YVLLS
Sbjct: 385 IDEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLS 444
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
+YA A RW DV +R M + G+ + PG SL+EV ++F + D SHP IY++++
Sbjct: 445 RVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEIYQVLN 504
Query: 504 QMEWQLKFEGYSPDISQV-LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+E ++ GY PD SQ + D KR+ L+ HS++LAIA L++L G PIRI +NL
Sbjct: 505 VVEERIDSTGYKPDYSQAPMVDELNTSKRDSLRLHSERLAIALGLLNLKPGMPIRIFKNL 564
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C+DCH T LIS I+ EIIVRDR RFH FKDG+CSC DYW
Sbjct: 565 RVCDDCHKVTGLISEIFNVEIIVRDRVRFHHFKDGSCSCMDYW 607
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/572 (39%), Positives = 342/572 (59%), Gaps = 5/572 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ C + + K++ A+++ G F + L+ CA+S +G + YA IFR I P
Sbjct: 7 LLQKCSSFSQIKQLQANLIINGDFHFSSSRTKLLELCAISSFGDLSYALHIFRYIPYPST 66
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEP-DNFTFPALFKACAKLQALKEGMQIH 154
D+N +IRG + A+F Y M G+ D T KACA+ A E +Q+H
Sbjct: 67 NDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRIDALTCSFALKACARALARSEAIQLH 126
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ + GF D+ +Q +L++ Y K ++ A +F +M Q +ASW+A+IA A +
Sbjct: 127 SQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIAGFAQGSRPA 186
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ + F M + RP + L AC+ LGAL G+ H ++ NV V +
Sbjct: 187 DAIMTFKRMKVDGNLRPNAVTVQGALLACSQLGALKEGESVHKYIVEEKLDSNVQVCNVV 246
Query: 275 IDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
IDMY KCG ++K +F M DK +T++ MI AMHG G +AL +F ++ R G+ PD
Sbjct: 247 IDMYAKCGSMDKAYWVFENMRCDKSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPD 306
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V Y+ VL AC+HAGLV +GL F+ M + + P ++HYG +VDL+GRAG L EA +++
Sbjct: 307 AVSYLAVLCACNHAGLVEDGLKLFNSMT-QRGLEPNIKHYGSMVDLLGRAGRLKEAYDIV 365
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
S+P N V+W++LL A + + ++E+ E+A++ L ++ +VLLSN+YA QRW
Sbjct: 366 SSLPFP-NMVLWQTLLGACRTYGDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWD 424
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
DV ++R M + + ++PGFS +E+ K+YKFV+ D+SH + IY + ++ ++K G
Sbjct: 425 DVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEINLRIKAYG 484
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
YS D S VL D+ +++K L HS+KLA+AF L +G+PI++ +NLR+C DCH K
Sbjct: 485 YSADTSNVLHDIGDEDKENALCYHSEKLAVAFGLTCTEEGTPIQVIKNLRICGDCHVVIK 544
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS IY REIIVRDR RFHRFK+G CSC+DYW
Sbjct: 545 LISKIYIREIIVRDRTRFHRFKEGLCSCKDYW 576
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/575 (39%), Positives = 339/575 (58%), Gaps = 13/575 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVL---KWGFFWNPFCAS--NLVATCALSHWGSMDYACSIFRQI 91
+L +L+ K +HA+V+ K G P C + ++ C ++ YA +F +
Sbjct: 234 VLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCE-----NLAYARRVFDGL 288
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + +I ++ E + L+ +M G+ P+ T +L K C AL+ G
Sbjct: 289 SKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGK 348
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H + GF L + + I+MYGKC V A ++F K + WSA+I+++A N
Sbjct: 349 LLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNN 408
Query: 212 LWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
E +F M C RP E +VS+L C G+L++GK H + + ++I+
Sbjct: 409 CIDEAFDIFVHMTG--CGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMIL 466
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+TS +DMY CG ++ LF D+ ++ MISG AMHG G+ AL +F EM G+
Sbjct: 467 KTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGV 526
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+D+ ++G L ACSH+GL+ EG F +M E+ P V+HYGC+VDL+GRAG+L EA
Sbjct: 527 TPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAH 586
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
ELI+SMP++ N V+ S L+A K+H N+++GE AAK + H VL+SN+YA A
Sbjct: 587 ELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASAN 646
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
RW DVA IR M +G+ + PG S +EV +++F+ DR HP +YEMI +M +L+
Sbjct: 647 RWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLE 706
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY+PD+S VL ++D+++K L HS+KLA+A+ LI + G PIRI +NLR+C+DCH
Sbjct: 707 DAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDCHN 766
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKL+S IY REIIVRDR RFH FK+G+CSC DYW
Sbjct: 767 ATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 35/404 (8%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL 69
+L TQ + P P + Q+ L I NL E +++H H +K S
Sbjct: 33 TLKFTQSQPKPNVPHI------QQELHI-----NLNETQQLHGHFIK-----TSSNCSYR 76
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
V AL + S A + LI ++K +A +Y M E
Sbjct: 77 VPLAALESYSS--------------NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEV 122
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
DNF P++ KAC + + G ++HG V K GF D+FV N+LI MY + + A +F
Sbjct: 123 DNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLF 182
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+++ K V SWS +I ++ +GL E L L +M+ + +P E ++S+ L L
Sbjct: 183 DKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRV-KPSEIGMISITHVLAELADL 241
Query: 250 DLGKCTHGSLIRN--ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
LGK H ++RN V + T+LIDMYVKC L +F ++ ++++ MI+
Sbjct: 242 KLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIA 301
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
E + +F +ML EG+ P+++ + ++ C AG + G L L
Sbjct: 302 AYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKL-LHAFTLRNGFT 360
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++ +D+ G+ G + A + S ++ ++W +++S+
Sbjct: 361 LSLVLATAFIDMYGKCGDVRSARSVFDSFK-SKDLMMWSAMISS 403
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/594 (40%), Positives = 357/594 (60%), Gaps = 24/594 (4%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIF 88
Q ++ +TC ++ + K++HA L+ + P F ++ S + ++YA +F
Sbjct: 106 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 163
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQA 146
I+ +F +NTLIR +V EEA LY +M ERG PD TFP + KACA +
Sbjct: 164 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 223
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
EG Q+H + K GF D++V N LI++YG C ++ A +F +M ++S+ SW+++I A
Sbjct: 224 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 283
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-- 264
G + L+LF EM ++ + P+ + SVLSAC LG+L LG H L+R
Sbjct: 284 LVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 341
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
A++V+V+ SLI+MY KCG L +F+ M + +++ MI G A HG+ +EA++ F
Sbjct: 342 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 401
Query: 324 EML--REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
M+ RE + P+ V +VG+L AC+H G VN+G FD M +Y I P ++HYGC+VDL+
Sbjct: 402 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 461
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD-- 438
RAG + EA++++ SMP++ + V+WRSLL A K ++E+ E A+N+ + S
Sbjct: 462 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNG 521
Query: 439 -----YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
YVLLS +YA A RW DV +R M+ G+ + PG S +E+ ++F + D SHP
Sbjct: 522 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 581
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRE-RLKGHSQKLAIAFALIHLS 551
IY+ + ++ +L+ GY PD SQ L D D +E L+ HS++LAIAF LI+L
Sbjct: 582 QTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLP 641
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+PIRI +NLR+CNDCH TKLIS ++ EIIVRDR RFH FKDG+CSC DYW
Sbjct: 642 PQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 695
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 341/573 (59%), Gaps = 7/573 (1%)
Query: 37 ILKTCKNLEEFKKV----HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK C L + V H+ V+K GF W+ F + LV C S G + A +F +I
Sbjct: 107 VLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLV--CLYSKNGFLTDARKVFDEIP 164
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + +I G+++ F EAL L+ + E G+ PD+FT + AC+++ L G
Sbjct: 165 EKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRW 224
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
I G++ + G ++FV SL++MY KC +E A +F M +K V WSA+I +ASNG+
Sbjct: 225 IDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGM 284
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L +F EM E RP+ +V V SAC+ LGAL+LG G + + N ++ T
Sbjct: 285 PKEALDVFFEMQRENV-RPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGT 343
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LID Y KCG + + +F+ M K + ++ +ISGLAM G A +F +M++ G++P
Sbjct: 344 ALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQP 403
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D +VG+L C+HAGLV++G F M + + PT++HYGC+VDL RAG+L EA +L
Sbjct: 404 DGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDL 463
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+SMP++ N +VW +LL ++H + ++ E K L ++ + YVLLSN+Y+ + RW
Sbjct: 464 IRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRW 523
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+ KIR+ + KG+ + PG S VEV V++F+ D SHP IYE + + L+
Sbjct: 524 DEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREA 583
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+P VL DV+E+EK L HS+KLA+AFALI IR+ +NLR+C DCH
Sbjct: 584 GYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAI 643
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KL+S + REIIVRD RFH F +G+CSCRDYW
Sbjct: 644 KLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 207/385 (53%), Gaps = 21/385 (5%)
Query: 38 LKTC-----KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
LK C K+L + K+ H +L+ G + + NL+ +L H+ + YA +F Q
Sbjct: 5 LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLI-NLLLRSSL-HFAATQYATVVFAQTP 62
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEGM 151
P F +NTLIRG V F +A+ +Y M + G PDNFTFP + KAC +L G+
Sbjct: 63 HPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL 122
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H V K GF+ D+FV+ L+ +Y K + A +F ++ +K+V SW+AII + +G
Sbjct: 123 SLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESG 182
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ E L LF + E RP+ LV +L AC+ +G L G+ G + + S NV V
Sbjct: 183 CFGEALGLFRGL-LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVA 241
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
TSL+DMY KCG +E+ +F M +K + +S +I G A +G KEAL +F EM RE +
Sbjct: 242 TSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVR 301
Query: 332 PDDVVYVGVLSACSHAGLVN-----EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
PD VGV SACS G + GL+ D L ++ T ++D + G +
Sbjct: 302 PDCYAMVGVFSACSRLGALELGNWARGLMDGDEF-LSNPVLGTA-----LIDFYAKCGSV 355
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
+A E+ + M +++ VV+ +++S
Sbjct: 356 AQAKEVFKGMR-RKDCVVFNAVISG 379
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/603 (38%), Positives = 357/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA------------------- 74
+LK+C K EE +++H HVLK G+ + + ++L++ A
Sbjct: 72 LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131
Query: 75 ----------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
+ G++ A +F +I +N +I G+ + ++EAL L+ EM +
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T + ACA+ ++++ G Q+H + GF +L + N+LI++Y KC +VE
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I + L+ E L LF EM P + +VS+L AC
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSG-ESPNDVTIVSILPACA 310
Query: 245 HLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F M K ++
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ +FS M + G+EPDD+ +VG+LSACSH+G ++ G F M
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y I P ++HYGC++DL+G +G+ EA E+I++MP++ + V+W SLL A + H NLE+ E
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAE 490
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL ++ +P YVLLSN+YA A W +VAK+R + KG+ + PG S +E+ +V
Sbjct: 491 SFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEV 550
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 551 HEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 610
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKL+S IY+REII RDR RFH F+DG CSC
Sbjct: 611 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCN 670
Query: 603 DYW 605
D+W
Sbjct: 671 DFW 673
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 206/390 (52%), Gaps = 39/390 (10%)
Query: 67 SNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
S L+ C LS H+ YA S+F I EP +NT++RG+ + AL LY M
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE-- 183
G+ P+++TFP L K+CAK +A +EG QIHGHV K+G+E DL+V SLI+MY + ++E
Sbjct: 61 GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA 120
Query: 184 ---------------------FASA--------IFKQMDQKSVASWSAIIAAHASNGLWS 214
+AS+ +F ++ K V SW+A+I+ +A G +
Sbjct: 121 HKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK 180
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+LF EM RP+E +V+VLSAC +++LG+ H + + N+ + +L
Sbjct: 181 EALELFKEMMKTNV-RPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNAL 239
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
ID+Y KCG +E LF ++ K ++++ +I G KEAL +F EMLR G P+D
Sbjct: 240 IDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 299
Query: 335 VVYVGVLSACSHAGLVNEGL---LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
V V +L AC+H G ++ G + D+ + P+++ ++D+ + G + A +
Sbjct: 300 VTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQ 357
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
+ SM + ++ W +++ +H G
Sbjct: 358 VFNSM-LHKSLSSWNAMIFGFAMHGRANAG 386
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 152/332 (45%), Gaps = 49/332 (14%)
Query: 26 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N+R E +T+L C +++E ++VH+ + GF SNL AL S
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGF------GSNLKIVNALIDLYSKC 246
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ AC +F + +NTLI G+ ++EAL L+ EM G P++ T ++
Sbjct: 247 GQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSIL 306
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECD--LFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA L A+ G IH ++ K + ++ SLI+MY KC +E A +F M KS
Sbjct: 307 PACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS 366
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
++SW+A+I A +G + LF M P++ V +LSAC+H G LDLG+
Sbjct: 367 LSSWNAMIFGFAMHGRANAGFDLFSRMRKNGI-EPDDITFVGLLSACSHSGKLDLGRHIF 425
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
S+ ++ T ++ Y GC MI L G K
Sbjct: 426 KSMTQDYDI------TPKLEHY---GC---------------------MIDLLGHSGLFK 455
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
EA + M +EPD V++ +L AC G
Sbjct: 456 EAKEMIKTM---PMEPDGVIWCSLLKACRRHG 484
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/605 (40%), Positives = 355/605 (58%), Gaps = 39/605 (6%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF----- 88
+ K+C K E K++HAH LK +NP ++++ A G MD+A +F
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYA--SVGEMDFARLVFDKSSL 194
Query: 89 -----------------------RQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEM 122
R DE D +N +I G+V+ FEEA+ + EM
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM 254
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
E V P+ T + AC ++ + G I V GF +L + N+LI+MY KC +
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGET 314
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
+ A +F +++K V SW+ +I ++ L+ E L LF M +P + + +L A
Sbjct: 315 DIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV-KPNDVTFLGILHA 373
Query: 243 CTHLGALDLGKCTHGSLIRNI-SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C LGALDLGK H + +N+ ++ N + TSLIDMY KCGC+E +FR M + +
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGL-EPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
++ M+SG AMHG + AL++FSEM+ +GL PDD+ +VGVLSAC+ AGLV+ G F M
Sbjct: 434 WNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSM 493
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+Y I P +QHYGC++DL+ RA EA L+++M ++ + +W SLLSA K H +E
Sbjct: 494 IQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEF 553
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GE A+ LFQ+ + +VLLSN+YA A RW DVA+IRT + KG+ + PG + +E+
Sbjct: 554 GEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDG 613
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
V++F+ D+ HP +NIY+M+++++ L+ G+ P+ S+VL D+DE+ K L HS+K
Sbjct: 614 DVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEK 673
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAI+F LI G+ IRI +NLR+C +CH+ TKLIS I+ REII RDR RFH FKDG CS
Sbjct: 674 LAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCS 733
Query: 601 CRDYW 605
C D W
Sbjct: 734 CNDCW 738
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 231/472 (48%), Gaps = 49/472 (10%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
P P + L++ L +L+ CKN+ FK++H+ ++K G F S L+ CA+S
Sbjct: 17 PASDPPYKI-LEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPS 75
Query: 79 GSMDYACSIF---RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
G + YA S+F +Q + F +N+LIRG+ +L L++ M GV+P++ TFP
Sbjct: 76 GDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFP 135
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI------- 188
LFK+C K +A EG Q+H H K+ + V S+I+MY +++FA +
Sbjct: 136 FLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR 195
Query: 189 ------------------------FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
F ++ K V SW+A+I+ + +G + E + F EM
Sbjct: 196 DAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM- 254
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYVKCGC 283
E P +S +V VLSAC H + +LGK GS +R N N+ + +LIDMY KCG
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWI-GSWVRDNGFGSNLQLTNALIDMYCKCGE 313
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+ LF + +K ++++ MI G + +EAL++F MLR ++P+DV ++G+L A
Sbjct: 314 TDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHA 373
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C+ G ++ G + R + ++D+ + G + A + +SM +N
Sbjct: 374 CACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMH-SRNLA 432
Query: 404 VWRSLLSASKVHHNLE-----IGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
W ++LS +H + E E+ K LF+ P D + + A Q
Sbjct: 433 SWNAMLSGFAMHGHAERALALFSEMVNKGLFR-----PDDITFVGVLSACTQ 479
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/605 (38%), Positives = 363/605 (60%), Gaps = 39/605 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C FK ++H VLK+GF + + ++L++
Sbjct: 109 LLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRD 168
Query: 72 ----TCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + G ++ A +F +I +N I G+ + ++EAL L+ +M +
Sbjct: 169 VVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMK 228
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC ++E
Sbjct: 229 TNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELET 288
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSA 242
A +F+ + K V SW+ +I + L+ E L LF +M + EK P + ++S+LSA
Sbjct: 289 ACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEK---PNDVTMLSILSA 345
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
C HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F M ++
Sbjct: 346 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+++ MI G AMHG+ A IFS M + G+EPDD+ +VG+LSACSH+G+++ G F M
Sbjct: 406 SWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSM 465
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+Y+++P ++HYGC++DL G +G+ EA ++I +M ++ + V+W SLL A K+H N+E+
Sbjct: 466 TRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVEL 525
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GE A+NL +I +P YVLLSN+YA A+RW +VAK R + KG+ + PG S +E+
Sbjct: 526 GESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDS 585
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
V++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+K
Sbjct: 586 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEK 645
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CS
Sbjct: 646 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECS 705
Query: 601 CRDYW 605
C DYW
Sbjct: 706 CNDYW 710
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 217/419 (51%), Gaps = 35/419 (8%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIF 88
+ L++L CK L+ + +HA ++K G + S L+ C LS H+ + YA S+F
Sbjct: 1 RNHPSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVF 60
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I EP +NT+ RG + AL LY M G+ P+++TFP L K+CAK A K
Sbjct: 61 DTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFK 120
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMY---GKCEK------------------------ 181
EG Q+HG V K GF+ DL++ SLI+MY G+ E
Sbjct: 121 EGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYA 180
Query: 182 ----VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+E A +F ++ K V SW+A I+ +A G + E L+LF +M RP+ES +V
Sbjct: 181 SRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNV-RPDESTMV 239
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VLSAC G+++LG+ H + + N+ + +LID+Y KCG LE LF+ +++K
Sbjct: 240 TVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK 299
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ +I G KEAL +F +MLR G +P+DV + +LSAC+H G ++ G
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH 359
Query: 358 DRMKLEYRIVPTVQHY-GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + V ++D+ + G + A ++ SM + ++ W +++ +H
Sbjct: 360 VYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMH 417
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 41/333 (12%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
N+R E +T+L C ++E ++VH+ + GF N + L+ S G ++
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDL--YSKCGELE 287
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
AC +F+ + +NTLI G+ ++EAL L+ +M G +P++ T ++ ACA
Sbjct: 288 TACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACA 347
Query: 143 KLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
L A+ G IH ++ K G ++ SLI+MY KC +E A +F M +S++SW
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A+I A +G + +F M P++ V +LSAC+H G LDLG+ S+
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGI-EPDDITFVGLLSACSHSGMLDLGRHIFRSMT 466
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
R+ +++M Y MI G KEA
Sbjct: 467 RD----------------------------YKLMPKLEH--YGCMIDLXGHSGLFKEAEK 496
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ + M +EPD V++ +L AC G V G
Sbjct: 497 MINTM---EMEPDGVIWCSLLKACKMHGNVELG 526
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 146/361 (40%), Gaps = 48/361 (13%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN---MYGKCEKVEFASAIFKQM 192
+L C LQ+L+ IH + K G + + L+ + + + +A ++F +
Sbjct: 7 SLLHXCKTLQSLR---IIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+ + W+ + HA + LKL+ M + P +L +C A G
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLL-PNSYTFPFLLKSCAKSXAFKEG 122
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLE--------------------------K 286
+ HG +++ L++ + TSLI MYV+ G LE +
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 287 GLC-----LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +F + K ++++ ISG A G KEAL +F +M++ + PD+ V VL
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SAC+ +G + G + ++ ++ ++DL + G L A L Q +
Sbjct: 243 SACAQSGSIELGRQVHSWIN-DHGFGXNLKIVNALIDLYSKCGELETACGLFQGL--SNK 299
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ-------RWYD 454
DV+ + L H NL + + P+D +LS + A A RW
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIH 359
Query: 455 V 455
V
Sbjct: 360 V 360
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/570 (39%), Positives = 347/570 (60%), Gaps = 3/570 (0%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++ K+C L E K++H H K GF + + + L+ S+ G + A +F ++
Sbjct: 145 SLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNM--YSNCGCLVSARKVFDKMVNKS 202
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ T+I + + EA+ L+ M V+P+ T + ACA+ + L+ Q+H
Sbjct: 203 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHK 262
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
++ + G + ++L+++Y KC A +F +M +K++ W+ +I H + + E
Sbjct: 263 YIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEE 322
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L LF EM + ++ + S+L ACTHLGAL+LGK H + + ++V + T+L+
Sbjct: 323 ALSLFNEMQLSGV-KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALV 381
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KCG +E + +F+ M +K +T++ +I GLAM GQG +AL +F EM ++PD +
Sbjct: 382 DMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAI 441
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+VGVL+ACSHAGLVNEG+ F+ M +Y I P+++HYGC+VD++GRAG + EA +LIQ+
Sbjct: 442 TFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQN 501
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
MP+ + V LLSA ++H NL + E AA+ L +++ + YVLLSN+Y+ + W
Sbjct: 502 MPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAA 561
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
K+R M + + + PG S +EV V++FV D SHP IYE + M +LK GY
Sbjct: 562 KKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYV 621
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
PD S+VL D+DE EK L HS+KLAIAF L+ + G+PIR+ +NLR+C+DCH+ K I
Sbjct: 622 PDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFI 681
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S +Y REIIVRDR RFH F G+CSCRD+W
Sbjct: 682 SEVYNREIIVRDRNRFHHFTKGSCSCRDFW 711
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 219/406 (53%), Gaps = 16/406 (3%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
+++ CL L+ C + + K++HA +L+ F +PF AS +VA CAL GS+ YA +
Sbjct: 37 QIQLHPCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLV 96
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F QI P F N++IRG+ + +A+ Y M +G++PD FTFP+LFK+C L
Sbjct: 97 FNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VL 153
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
EG Q+H H K+GF D ++QN+L+NMY C + A +F +M KSV SW+ +I A+
Sbjct: 154 CEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAY 213
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A L E +KLF M +P E LV+VL+AC L+ K H + +
Sbjct: 214 AQWDLPHEAIKLFRRMEIASV-KPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++ ++L+D+Y KCGC LF M +K +++MI+G +EALS+F+EM
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G++ D V +L AC+H G + G ++ E +I V +VD+ + G +
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE-KIEVDVALGTALVDMYAKCGSIE 391
Query: 388 EALELIQSMPIQQNDVVWRSL----------LSASKVHHNLEIGEI 423
A+ + Q MP +++ + W +L L A ++ H +++ E+
Sbjct: 392 SAMRVFQEMP-EKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 436
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/568 (40%), Positives = 342/568 (60%), Gaps = 7/568 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L + +VH H+L G +PF A+ L+ S GS+DYA +F + + + +N L
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA----KLQALKEGMQIHGHVF 158
R EE L LY +M GVE D FT+ + KAC + L +G +IH H+
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+ G+ +++ +L++MY + V++AS +F M ++V SWSA+IA +A NG E L+
Sbjct: 210 RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALR 269
Query: 219 LFGEMNNE-KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F EM E K P +VSVL AC L AL+ GK HG ++R + V ++L+ M
Sbjct: 270 TFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTM 329
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y +CG LE G +F M D+ ++++ +IS +HG GK+A+ IF EML G P V +
Sbjct: 330 YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTF 389
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
V VL ACSH GLV EG F+ M ++ I P ++HY C+VDL+GRA L EA +++Q M
Sbjct: 390 VSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMR 449
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
+ VW SLL + ++H N+E+ E A++ LF + + +YVLL+++YA AQ W +V +
Sbjct: 450 TEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKR 509
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
++ + +GL + PG +EV RK+Y FVS D +P + I+ + ++ +K +GY P
Sbjct: 510 VKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
VL +++ +EK + GHS+KLA+AF LI+ S+G PIRI +NLR+C DCH +TK IS
Sbjct: 570 TKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISK 629
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
E+EI+VRD RFHRFK+G CSC DYW
Sbjct: 630 FMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 153/326 (46%), Gaps = 21/326 (6%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N LI+ KE + ++A+ + + P T+ L C +L + +++H H+
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
G + D F+ LI MY V++A +F + ++++ W+A+ A G E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 220 FGEMNNEKCWRPEESILVSVLSACT----HLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ +MN + VL AC + L GK H L R + +V + T+L+
Sbjct: 166 YWKMNRIGV-ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PD 333
DMY + GC++ +F M + +++S MI+ A +G+ EAL F EM+RE + P+
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
V V VL AC+ + +G L R L+ I+P + +V + GR G L
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLD-SILPVIS---ALVTMYGRCGKLEVGQ 340
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVH 415
+ M DVV W SL+S+ VH
Sbjct: 341 RVFDRM--HDRDVVSWNSLISSYGVH 364
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 122/224 (54%), Gaps = 5/224 (2%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ C+ T +L + K++HAH+ + G+ + + + LV A +G +DYA +F +
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA--RFGCVDYASYVFGGM 243
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE--RGVEPDNFTFPALFKACAKLQALKE 149
++ +I + K + EAL + EM + P++ T ++ +ACA L AL++
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IHG++ + G + L V ++L+ MYG+C K+E +F +M + V SW+++I+++
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+G + +++F EM P VSVL AC+H G ++ GK
Sbjct: 364 HGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHEGLVEEGK 406
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 347/604 (57%), Gaps = 34/604 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+++++ C L E K++H +L G +P VA+ AL++ ++ Y+ + P
Sbjct: 13 ISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNP 72
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQALKEGMQ 152
F FN++IR K + Y+ + + PDN+TF L + A+L A G
Sbjct: 73 TLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSS 132
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGK--------------CE-----------------K 181
+HG K GFE D VQ+ LI MY + CE
Sbjct: 133 VHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGD 192
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V FA +F +M K +W+A+I+ + G E L LF M E + E +VSVLS
Sbjct: 193 VGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGV-KVNEVSMVSVLS 251
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC+HLGALD G+ H + RN + + + T+LIDMY KCG + K + +F M +K T
Sbjct: 252 ACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYT 311
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+S I GLAM+G G++ L +FS M ++ ++P+++ +V VL CS GLV EG F+ M
Sbjct: 312 WSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMS 371
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
Y I P ++HYGC+VDL GRAG L EAL I SMP++ + W +LL+A K++ N+E+G
Sbjct: 372 KVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMG 431
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E+A++ + ++ + + YVLLSN+YA ++ W V+ +R M KG+ + PG S++EV +
Sbjct: 432 ELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGE 491
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V++F D+SHP + I M+ ++ +LK GY + + V D++E+EK + L HS+K+
Sbjct: 492 VHEFFVGDKSHPRYAEIQVMLGEISRRLKLSGYVANTNPVFFDIEEEEKEDALCMHSEKI 551
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
AIAF LI LS PIRI +NLR+C DCH TK+IS + REI+VRDR RFH F+DG CSC
Sbjct: 552 AIAFGLISLSPDVPIRIVKNLRVCWDCHDATKMISKAFNREIVVRDRNRFHHFRDGECSC 611
Query: 602 RDYW 605
+ YW
Sbjct: 612 KGYW 615
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/530 (39%), Positives = 333/530 (62%), Gaps = 2/530 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G+++ A F ++ + + +LI +V+E +++A+ L+ EM +GV PD ++
Sbjct: 700 SKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMT 759
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
++ ACA +L +G +H ++ K L V N+L++MY KC +E A +F Q+ K
Sbjct: 760 SVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVK 819
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ +I ++ N L +E LKLF EM E RP+ + +L AC L AL++G+
Sbjct: 820 DIVSWNTMIGGYSKNSLPNEALKLFAEMQKES--RPDGITMACLLPACGSLAALEIGRGI 877
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN + + V +LIDMYVKCG L LF M+ +K +T++VMISG MHG G
Sbjct: 878 HGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLG 937
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA++ F +M G++PD++ + +L ACSH+GL+NEG F+ M E + P ++HY C
Sbjct: 938 NEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYAC 997
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+ R G L +A LI++MPI+ + +W +LL ++HH++E+ E A+++F++ +
Sbjct: 998 MVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDN 1057
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVLL+N+YA A++W +V K+R + +GL +SPG S +EV K FVS D +HP
Sbjct: 1058 AGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQA 1117
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+I+ +++ + ++K EG+SP + L + + EK L GHS+KLA+AF +++L G
Sbjct: 1118 KSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRT 1177
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+A+NLR+C+DCH K +S REII+RD RFH FKDG CSCRD+W
Sbjct: 1178 IRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDFW 1227
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 197/413 (47%), Gaps = 7/413 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L T + E K++H V K GF ++L+AT S G +D A +F ++ +
Sbjct: 560 LKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKS--GEVDSAHKLFDELGDR 617
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N++I G V AL + +M V D T ACA + +L G +H
Sbjct: 618 DVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALH 677
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G K F ++ N+L++MY KC + A F++M QK+V SW+++IAA+ GL+
Sbjct: 678 GQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYD 737
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ ++LF EM + K P+ + SVL AC +LD G+ H + +N AL + V +L
Sbjct: 738 DAIRLFYEMES-KGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNAL 796
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG +E+ +F + K ++++ MI G + + EAL +F+EM +E PD
Sbjct: 797 MDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDG 855
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +L AC + G + L + ++D+ + G L A L
Sbjct: 856 ITMACLLPACGSLAALEIGRGIHGCI-LRNGYSSELHVANALIDMYVKCGSLVHARLLFD 914
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+P +++ + W ++S + H L IA +I P + S +YA
Sbjct: 915 MIP-EKDLITWTVMISGCGM-HGLGNEAIATFQKMRIAGIKPDEITFTSILYA 965
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 193/383 (50%), Gaps = 15/383 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
+IL+ C K L+E K VH+ + G + LV +C G++ IF
Sbjct: 456 SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSC-----GALREGRRIFD 510
Query: 90 QI-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I + F +N ++ + K ++ E+++L+ +M + G+ +++TF + K A L +
Sbjct: 511 HILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVG 570
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
E +IHG V+K+GF V NSLI Y K +V+ A +F ++ + V SW+++I+
Sbjct: 571 ECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV 630
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
NG L+ F +M + + + LV+ ++AC ++G+L LG+ HG ++ + V
Sbjct: 631 MNGFSHSALEFFVQMLILRVG-VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREV 689
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ +L+DMY KCG L + F M K ++++ +I+ G +A+ +F EM +
Sbjct: 690 MFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESK 749
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+ PD VL AC+ +++G + ++ + + + ++D+ + G + E
Sbjct: 750 GVSPDVYSMTSVLHACACGNSLDKGRDVHNYIR-KNNMALCLPVSNALMDMYAKCGSMEE 808
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
A + +P+ ++ V W +++
Sbjct: 809 AYLVFSQIPV-KDIVSWNTMIGG 830
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 147/337 (43%), Gaps = 29/337 (8%)
Query: 89 RQIDEPGAF---DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
R GAF D NT I F + + A+ L + E D + ++ + CA+ +
Sbjct: 408 RSSTRVGAFAKLDENTKICKFCEVGDLRNAVELLR--MSQKSELDLNAYSSILQLCAEHK 465
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ-MDQKSVASWSAII 204
L+EG +H + G + + L+ MY C + IF + V W+ ++
Sbjct: 466 CLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMM 525
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC-THLGALDLGKCTHGSLIR-N 262
+ +A G + E + LF +M +K S S + C LG + K HG + +
Sbjct: 526 SEYAKIGDYRESIYLFKKM--QKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLG 583
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ N +V SLI Y K G ++ LF + D+ ++++ MISG M+G AL F
Sbjct: 584 FGSYNTVV-NSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFF 642
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGL--------LCFDRMKLEYRIVPTVQHYG 374
+ML + D V ++AC++ G ++ G CF R V
Sbjct: 643 VQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSR---------EVMFNN 693
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G L +A++ + M Q+ V W SL++A
Sbjct: 694 TLLDMYSKCGNLNDAIQAFEKMG-QKTVVSWTSLIAA 729
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/576 (39%), Positives = 350/576 (60%), Gaps = 11/576 (1%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
++LK C L EFK +H V+K+ + + + N+ A C G + A +F
Sbjct: 84 SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC-----GDLKSARFLFE 138
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + ++I G++K EAL LY +M E G PD T L ACA+L+ L
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
GM++H H+ ++ + + ++L+NMY KC ++ A +F Q+ K V +WSA+I +
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVK 258
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N +E L+LF E+ RP E +++V+SAC LG L+ G+ H + R +V
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ SLIDM+ KCG ++ +F M+ K ++++ M++GLA+HG G+EAL+ F M
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTD 378
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L+PD++ ++GVL+ACSHAGLV EG F ++ Y + +HYGC+VDL+ RAG+L EA
Sbjct: 379 LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEA 438
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E I+ MP+Q + +W S+L A +V++NLE+GE AA+ L ++ + Y+LLSN+YAR
Sbjct: 439 REFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARR 498
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+ W +V K+R M KG+ ++PG S V + + F++ D SHP I M+ Q+ +L
Sbjct: 499 KMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL 558
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY D S+VL ++D+++K E + HS+KLA+ + L+ G I I +NLR+C+DCH
Sbjct: 559 KLVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCH 618
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T KL+S IY+R+I +RDR RFH FKDG+CSCRDYW
Sbjct: 619 TLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 6/367 (1%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKAC 141
YA S+F +N+++R FV AL Y EM ER PD FTFP+L K C
Sbjct: 30 YAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A L K G +HG V K DL+++ +L+NMY C ++ A +F++M ++ W+
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++I+ + N +E L L+ +M E + P+E + +++SAC L L +G H +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ ++ ++L++MY KCG L+ +F ++DK +S +I G + + EAL +
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 322 FSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
F E+ + P++V + V+SAC+ G + G D + + +V ++D+
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMF 327
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
+ G + A + SM ++ + W S+++ + H L +A +L Q P +
Sbjct: 328 SKCGDIDAAKRIFDSMS-YKDLISWNSMVNGLAL-HGLGREALAQFHLMQTTDLQPDEIT 385
Query: 441 LLSNMYA 447
+ + A
Sbjct: 386 FIGVLTA 392
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 85/164 (51%)
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V +A ++F V +W++++ A ++ + L+ + EM P+ S+L
Sbjct: 28 VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C L +GK HG +++ + ++ +ET+L++MY CG L+ LF M + ++
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
++ MISG + EAL ++ +M +G PD+V ++SAC+
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/616 (36%), Positives = 350/616 (56%), Gaps = 37/616 (6%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS----- 80
LR K + L +L++C + + K +H +L+ + F AS L+A C +
Sbjct: 8 TLRFKHPK-LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL 66
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ YA IF QI P F FN LIR F E +A Y +M + + PDN TFP L KA
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
++++ + G Q H + + GF+ D++V+NSL++MY C + A IF QM + V SW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 201 SAIIAAHASNGLWSECLKLFGEM--NNEKCWR---------------------------- 230
++++A + G+ ++F EM N W
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
E+++VSV+S+C HLGAL+ G+ + ++++ +N+I+ T+L+DM+ +CG +EK + +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + + L++S +I GLA+HG +A+ FS+M+ G P DV + VLSACSH GLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+GL ++ MK ++ I P ++HYGC+VD++GRAG L EA I M ++ N + +LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A K++ N E+ E L ++ H YVLLSN+YA A +W + +R M K + +
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 471 PGFSLVEVARKVYKF-VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PG+SL+E+ K+ KF + D+ HP I ++ +++ GY + DVDE+E
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEE 546
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K + HS+KLAIA+ ++ G+ IRI +NLR+C DCHT TKLIS +Y RE+IVRDR
Sbjct: 547 KESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRN 606
Query: 590 RFHRFKDGTCSCRDYW 605
RFH F++G CSCRDYW
Sbjct: 607 RFHHFRNGVCSCRDYW 622
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/548 (40%), Positives = 330/548 (60%), Gaps = 31/548 (5%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ +D+ F +N++I + + EAL ++ M + ++P+ TFP K+C+ L L
Sbjct: 34 KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 93
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ----------------- 191
G Q H GFE DLFV ++L++MY KC ++ A +F +
Sbjct: 94 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153
Query: 192 --------------MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
M ++ V SW++IIA +A NG+ +E +++F M + L
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VL AC H G+ LGKC H +I+ NV V TS+IDMY KCG +E F M +K
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++S M++G MHG KEAL +F EM G++P+ + +V VL+ACSHAGL+ EG F
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF 333
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M E+ + P V+HYGC+VDL+GRAG L EA +LI+ M ++ + VVW +LL A ++H N
Sbjct: 334 KAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 393
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+++GEI+A+ LF+++ + YVLLSN+YA A RW DV ++R M + GL + PGFSLV+
Sbjct: 394 VDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVD 453
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
+ +V+ F+ DR HP + IYE + ++ +L+ GY PD++ VL DV +EK L+ H
Sbjct: 454 IKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVH 513
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLA+AF +++ G+ I I +NLR+C DCHT K IS I +REI+VRD KRFH F+DG
Sbjct: 514 SEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDG 573
Query: 598 TCSCRDYW 605
CSC DYW
Sbjct: 574 LCSCGDYW 581
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +H V+K G N F ++++ G ++ A F ++ E ++ ++ G+
Sbjct: 229 KCIHDQVIKMGLESNVFVGTSIIDM--YCKCGKVEMARKAFDRMREKNVKSWSAMVAGYG 286
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG---MQIHGHVFKVGFEC 164
+EAL ++ EM GV+P+ TF ++ AC+ L+EG + H F V E
Sbjct: 287 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV--EP 344
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ ++++ G+ ++ A + K M + W A++ A
Sbjct: 345 GVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/611 (36%), Positives = 363/611 (59%), Gaps = 12/611 (1%)
Query: 4 TSVLHQSLLLTQPEEPP-----KGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWG 58
++ SL + P P P+ L +++ +++L+ +++ + +HA +++ G
Sbjct: 7 STTFAASLPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNG 66
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
+PF L+ +C+ H ++DYA IF+ P + + LI GFV + EA+ L
Sbjct: 67 HSQDPFMVFELLRSCSKCH--AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQL 124
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
Y+ M + PDN+ ++ KAC AL+EG ++H K+GF + V+ ++ +YGK
Sbjct: 125 YSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGK 184
Query: 179 CEKVEFASAIFKQMDQKSVAS----WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
C ++ A +F++M + VA W+A+I N + L+ F M E RP E
Sbjct: 185 CGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENV-RPNEF 243
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
+V VLSAC+ LGAL++G+ H + + LN+ V +LI+MY +CG +++ +F M
Sbjct: 244 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 303
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
D+ +TY+ MISGL+M+G+ ++A+ +F M+ L P +V +VGVL+ACSH GLV+ G
Sbjct: 304 KDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGF 363
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
F M +YR+ P ++HYGC+VDL+GR G L EA +LI++M + + ++ +LLSA K+
Sbjct: 364 EIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKM 423
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H NLE+GE AK L YVLLS++YA + +W + A++R +M G+ + PG S
Sbjct: 424 HKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCS 483
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+EV ++++F+ D HP + IYE + ++ L+ EGY P+ VL+D+++ EK L
Sbjct: 484 SIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWAL 543
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS++LAI + LI + IR+ +NLR+C DCH+ KLI+ I R+I+VRDR RFH F
Sbjct: 544 AMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYF 603
Query: 595 KDGTCSCRDYW 605
++G CSC DYW
Sbjct: 604 ENGACSCGDYW 614
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/530 (39%), Positives = 331/530 (62%), Gaps = 2/530 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G ++ A +F ++DE + ++I G+V+E + A+ L++EM RGV PD +
Sbjct: 399 SKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVT 458
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
++ ACA LK G +H ++ + E + FV N+L +MY KC ++ A +F M +K
Sbjct: 459 SILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKK 518
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V SW+ +I + N L +E L LF EM E +P+ + + +L AC L ALD G+
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQRES--KPDGTTVACILPACASLAALDKGREI 576
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +RN + + V +++DMYVKCG L LF M+ +K ++++VMI+G MHG G
Sbjct: 577 HGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYG 636
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA++ F++M G+EPD+V ++ +L ACSH+GL++EG F+ MK E +I P ++HY C
Sbjct: 637 SEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYAC 696
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+ R G L +A + I++MPI+ + +W +LL ++HH++++ E A+ +F++ +
Sbjct: 697 MVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPEN 756
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVLL+N+YA A++W +V K+R ++ +GL ++PG S +E+ K+ FV+ D S P
Sbjct: 757 TGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQA 816
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
I ++ ++ ++K EGYSP + L + DE EK L GHS+KLA+AF +++L G
Sbjct: 817 KKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKT 876
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH K +S REII+RD RFH FKDG+CSCR YW
Sbjct: 877 IRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGYW 926
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 191/384 (49%), Gaps = 17/384 (4%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
+IL+ C K++ + ++V + + G + LV C G M +F
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRM-----VFD 209
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ E F +N +I + + E++ L+ +M E G++P+++TF ++ K A + ++E
Sbjct: 210 KLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEE 269
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+HG + K+GF V NSLI+ Y KV A +F ++ + V SW+++I+ +
Sbjct: 270 GRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK 329
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNV 268
NGL +++F +M + + +V+V AC ++G L LGK H I+ + V
Sbjct: 330 NGLDDRGIEIFIKMLVFGV-DIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREV 388
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+L+DMY KCG L + +F M +K ++++ MI+G G A+ +F EM
Sbjct: 389 RFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSR 448
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+ PD +L+AC+ G + G + D ++ E + + D+ + G + +
Sbjct: 449 GVVPDVYAVTSILNACAINGNLKSGKIVHDYIR-ENNLETNSFVSNALTDMYAKCGSMKD 507
Query: 389 ALELIQSMPIQQNDVV-WRSLLSA 411
A ++ M ++ DV+ W +++
Sbjct: 508 AHDVFSHM--KKKDVISWNTMIGG 529
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 157/348 (45%), Gaps = 15/348 (4%)
Query: 108 KEVEFEEALFLYNEM-FERGVEPDNFTFPA---LFKACAKLQALKEGMQIHGHVFKVGFE 163
K VEF E L N M + NF A + + CA+ +++++G ++ + G
Sbjct: 123 KIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVM 182
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D + L+ MY KC ++ +F ++ + + W+ +I+ ++ +G + E + LF +M
Sbjct: 183 IDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQM 242
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYV--- 279
E +P S+L + ++ G+ HG + + ++ N +V SLI Y
Sbjct: 243 -LELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVV-NSLISFYFVGR 300
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
K C +K LF + D+ ++++ MISG +G + IF +ML G++ D V
Sbjct: 301 KVRCAQK---LFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVN 357
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
V AC++ G + G + + V+ ++D+ + G L A+ + + M +
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD-E 416
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ V W S+++ V L G I + + P Y + S + A
Sbjct: 417 KTVVSWTSMITGY-VREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNA 463
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/605 (39%), Positives = 357/605 (59%), Gaps = 21/605 (3%)
Query: 11 LLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV 70
LL +P+ PP ++ L+ L C +L ++HA +K G +P + L+
Sbjct: 13 LLPAKPKSPPP--------QQHPVLSHLPHCTSLRTLAQLHAAAVKAGLAAHPALVTRLL 64
Query: 71 ATCALSHWGS--MDYACSIFRQIDEPG-AFDFNTLIRGFVKEV-----EFEEALFLYNEM 122
C G + YA +F ++ P A +NTL+RG+ + E A+ ++ M
Sbjct: 65 TLCTGPDAGPAHLAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRM 124
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
E GV PD +TF +L KACA +A +EG Q H K+G +V+ +LINMY +C
Sbjct: 125 LEEGVAPDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDA 184
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
A +F D V S++A+IAA + E L LF EM K +P ++SVLSA
Sbjct: 185 RAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQG-KGLKPTSVTVISVLSA 243
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C LGAL+LG+ H +R I +++ V T+LIDMY KCG LE + +F+ M K +
Sbjct: 244 CALLGALELGRWVH-DYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQA 302
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+SVMI A HG G+EA+S+F EM +EG++PDD+ ++GVL ACSH+GLV+EGL FD MK
Sbjct: 303 WSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMK 362
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
++ IVP ++HYGCV DL+ R+G L A + I +PI ++WR+LLSA H + E+G
Sbjct: 363 -DHGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELG 421
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
+ + + +++ H DYV+ SN+ A W ++ +R M+ KG+ + PG S +E+
Sbjct: 422 KRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNT 481
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQK 540
V++F + D HP +M+ ++ QLK GY P+ S V ++ E+EK LK HS+K
Sbjct: 482 VHEFFAGDGRHPKSQEARKMVDEVIDQLKLVGYVPNTSHVFHVEMGEEEKAISLKYHSEK 541
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF L++ + G+ +R+ +NLR+C DCH+ KL+S+++ R II+RD RFH F++G CS
Sbjct: 542 LAIAFGLLNTAPGATLRVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEEGICS 601
Query: 601 CRDYW 605
C DYW
Sbjct: 602 CGDYW 606
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/608 (38%), Positives = 354/608 (58%), Gaps = 21/608 (3%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTC----KNLEEFKKVHAHVLKWGFFWN 62
L Q+L + E P Q+ +L C +L + +VH H+L G +
Sbjct: 62 LKQALRVLSQESSP----------SQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQD 111
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
PF A+ L+ S GS+DYA +F + + + +N L R EE L LY +M
Sbjct: 112 PFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 123 FERGVEPDNFTFPALFKACAKLQA----LKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
GVE D FT+ + KAC + L +G +IH H+ + G+ +++ +L++MY +
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYAR 229
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE-KCWRPEESILV 237
V++AS +F M ++V SWSA+IA +A NG E L+ F EM E K P +V
Sbjct: 230 FGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMV 289
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
SVL AC L AL+ G+ HG ++R + V ++L+ MY +CG L+ G +F M D+
Sbjct: 290 SVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDR 349
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ +IS +HG G++A+ IF EML G P V +V VL ACSH GLV EG F
Sbjct: 350 DVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+ M ++ I P V+HY C+VDL+GRA L EA +++Q M + VW SLL + ++H N
Sbjct: 410 ESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGN 469
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E+ E A++ LF + + +YVLL+++YA AQ W +V +++ + +GL + PG +E
Sbjct: 470 VELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V RK+Y FVS D +P + I+ + ++ +K +GY P VL +++ +EK + GH
Sbjct: 530 VRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGH 589
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLA+AF LI+ S+G PIRI +NLR+C DCH +TK IS E+EI+VRD RFHRFK+G
Sbjct: 590 SEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNG 649
Query: 598 TCSCRDYW 605
CSC DYW
Sbjct: 650 VCSCGDYW 657
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 151/326 (46%), Gaps = 21/326 (6%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N LI+ KE + ++AL + + P T+ L C +L +G+++H H+
Sbjct: 50 NQLIQSLCKEGKLKQAL----RVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILD 105
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
G + D F+ LI MY V++A +F + ++++ W+A+ A G E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 220 FGEMNNEKCWRPEESILVSVLSACT----HLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ +MN + VL AC L GK H L R +V + T+L+
Sbjct: 166 YWKMNRIGV-ESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLV 224
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PD 333
DMY + GC++ +F M + +++S MI+ A +G+ EAL F EM+ E + P+
Sbjct: 225 DMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPN 284
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
V V VL AC+ + +G L R L+ I+P + +V + GR G L
Sbjct: 285 SVTMVSVLQACASLAALEQGRLIHGYILRRGLD-SILPVIS---ALVTMYGRCGKLDVGQ 340
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVH 415
+ M DVV W SL+S+ VH
Sbjct: 341 RVFDRM--HDRDVVSWNSLISSYGVH 364
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/589 (39%), Positives = 349/589 (59%), Gaps = 16/589 (2%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC---ALSHWGSMDYACS 86
++ L L C L ++HA +K G +P + L+ C + + YA
Sbjct: 30 QQHPLLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQ 89
Query: 87 IFRQIDEPGAFD-FNTLIRGFVK-------EVEFEEALFLYNEMFERGVEPDNFTFPALF 138
+F +I PG +NTL+RG+ + EEA ++ M E GV PD +TF +L
Sbjct: 90 VFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLL 149
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KACA +A +EG Q HG KVG +V +LINMY +C A +F ++D + V
Sbjct: 150 KACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVV 209
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
S++A+I A + E L LF EM K + L+SVLSAC LGAL+LG+ H
Sbjct: 210 SYNAMITAAVRSSRPGEALVLFREMQ-AKGLKLTSVTLISVLSACALLGALELGRWIH-E 267
Query: 259 LIRNISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+R + +++ V T+LIDMY KCG LE + +F+ M + + +SVMI A H G+E
Sbjct: 268 YVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGRE 327
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A+S+F EM ++G++PDDV ++GVL ACSH+GLV+EGL FD M+ E+ +VP ++HYGCV
Sbjct: 328 AISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSMR-EFGLVPGIKHYGCVA 386
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+ R+G L A E I +PI+ ++WR+LLSA + ++G+ + + +++ H
Sbjct: 387 DLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGG 446
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
DYV+ SN+ A RW ++ ++R M KG+ + PG S +EV +V++F + D HP +
Sbjct: 447 DYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLD 506
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
M+ + QLK GY P+ S V ++ E+EK L+ HS+KLAI+F L++ S G+ +
Sbjct: 507 ARRMVDGVIEQLKLAGYVPNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTL 566
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C DCH+ KL+S+++ R II+RD RFH F+DG CSC DYW
Sbjct: 567 RVVKNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/603 (38%), Positives = 359/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K E +++H HVLK G+ + + ++L++
Sbjct: 94 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 153
Query: 72 ----TCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + S Y S + DE D +N +I G+ + +EAL L+ EM +
Sbjct: 154 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 213
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T ++ ACA+ +++ G Q+H + GF +L + N+LI++Y KC +VE
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ESPNDVTMLSILPACA 332
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+++G+ H + + + + TSLIDMY KCG +E +F + ++ ++
Sbjct: 333 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 392
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A IFS M + +EPDD+ +VG+LSACSH+G+++ G F MK
Sbjct: 393 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 452
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y+I P ++HYGC++DL+G +G+ EA E+I +M ++ + V+W SLL A K+H N+E+GE
Sbjct: 453 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGE 512
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW +VAKIR + KG+ + PG S +E+ V
Sbjct: 513 SYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 572
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 573 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 632
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 633 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 692
Query: 603 DYW 605
DYW
Sbjct: 693 DYW 695
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 210/404 (51%), Gaps = 39/404 (9%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
+ +HA ++K G + S L+ C LS H+ + YA S+F I EP +NT+ RG
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRG 62
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ AL+LY M G+ P+ +TFP L K+CAK +A +EG QIHGHV K+G++ D
Sbjct: 63 HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLD 122
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-- 223
L+V SLI+MY + ++E A +F Q + V S++A+I +AS G + K+F E+
Sbjct: 123 LYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPI 182
Query: 224 -----------------NNEKCW-----------RPEESILVSVLSACTHLGALDLGKCT 255
NN++ RP+ES +VSV+SAC +++LG+
Sbjct: 183 KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQV 242
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + + N+ + +LID+Y+KCG +E LF ++ K ++++ +I G
Sbjct: 243 HSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLY 302
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG----LLCFDRMKLEYRIVPTVQ 371
KEAL +F EMLR G P+DV + +L AC+H G + G + R+K +
Sbjct: 303 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLK---GVANASS 359
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
H ++D+ + G + A ++ S+ + ++ W +++ +H
Sbjct: 360 HRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMH 402
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/537 (41%), Positives = 326/537 (60%), Gaps = 6/537 (1%)
Query: 66 ASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE- 124
A L+ CA ++ A IF + P F N ++ + + A+ +N
Sbjct: 27 AVKLIGACA--DHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQVSS 84
Query: 125 -RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
PD FTF ++ KACA L + G +IH V K GFE +LFV+NSLI+MY K +
Sbjct: 85 PNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGYLL 144
Query: 184 FASAIFKQM--DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
A +F +M ++V W+A+IA +A N +S+ +++F M P + LVSVL
Sbjct: 145 LARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLP 204
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC HLGALDLGK G + R AL + + +L DMY KCGC+ + +F M ++ ++
Sbjct: 205 ACAHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVIS 264
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+S++I GLAM+G EA F EML G +P+DVV++G+L+AC+HAGLV +GL CF+ M
Sbjct: 265 WSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMD 324
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
EY + P V+HYGCVVDL+ RAG L +A ++I SMP++ N ++W +LL +++ + G
Sbjct: 325 KEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRG 384
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
+ +++ +++S H YV L+N+Y+ R D AK R M G+ ++PG S +EV
Sbjct: 385 QRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNT 444
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V++F D SHP + IY MI ++ W++K GY P V+ +DE+EK + L HS+KL
Sbjct: 445 VHEFFMGDLSHPESNKIYSMIRELMWKMKLAGYKPKTDLVVHSIDEEEKEDALSIHSEKL 504
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
AIAF LI S+G+ IR+ +NLR+CNDCH K+IS I +REIIVRDR RFH FKDG
Sbjct: 505 AIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDGA 561
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/585 (40%), Positives = 353/585 (60%), Gaps = 23/585 (3%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD-----YACSIFRQIDEP 94
T + + K++HA L+ +P + + T L H+ S+ YA +F P
Sbjct: 31 TTITMPQLKQIHAQTLRTVNSNHP--NAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNP 88
Query: 95 GAFDFNTLIRGFVKEVEFE---EALFLYNEMF---ERGVEPDNFTFPALFKACAKLQALK 148
+F +NTLIR + + +A+ LY M E+ PDN TFP + KACA +L
Sbjct: 89 NSFMWNTLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLC 148
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
EG Q+H HV K GFE D ++ NSL++ Y C ++ A +F +M +++ SW+ +I ++A
Sbjct: 149 EGKQVHAHVLKHGFESDTYICNSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYA 208
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS---A 265
G++ L++FGEM ++ P+ + SV+SAC LGAL LG H +++
Sbjct: 209 KGGIFDTALRMFGEM--QRVHDPDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMV 266
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+V+V T L+DMY K G LE +F MA + ++ MI GLAMHG+ K AL+ + M
Sbjct: 267 DDVLVNTCLVDMYCKSGELEIAKQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRM 326
Query: 326 LR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
++ E + P+ + +VGVLSAC+H G+V+EG++ FD M EY + P ++HYGC+VDL RAG
Sbjct: 327 VKVEKIVPNSITFVGVLSACNHRGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAG 386
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD--YVL 441
+ EAL L+ M I+ + V+WRSLL A K + ++E+ E AK +F+ S YVL
Sbjct: 387 RINEALNLVSEMSIKPDAVIWRSLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYVL 446
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LS +YA A RW DV +R M+ KG+ + PG S++E+ V++F + D +HP +NIY++
Sbjct: 447 LSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSIIEIDGVVHEFFAGDTTHPKSENIYKV 506
Query: 502 IHQMEWQLKFEGYSPDISQV-LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ ++E +L+ GY PD S + D D K L+ HS++LAIAF +++ PIR+ +
Sbjct: 507 VTEIEEKLESIGYLPDYSGAPMVDEVNDGKLNTLRLHSERLAIAFGILNSKPDVPIRVFK 566
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+CNDCH TKLIS IY EIIVRDR RFH FKDGTCSC DYW
Sbjct: 567 NLRVCNDCHRVTKLISRIYNVEIIVRDRARFHHFKDGTCSCMDYW 611
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 357/604 (59%), Gaps = 37/604 (6%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW--------------- 78
+LK+C K E +++H VLK GF + + ++L++ + +W
Sbjct: 70 LLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISM-YVQNWRLEDAYKVFDRSSHR 128
Query: 79 ---------------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
G + A +F +I +N +I G+ + ++EAL L+ EM
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
+ V PD T+ + ACA +++ G Q+H V GF+ +L + N+LI++Y KC +VE
Sbjct: 189 KMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVE 248
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F+ + K V SW+ +I + L+ E L LF EM P + ++SVL AC
Sbjct: 249 TACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSVLPAC 307
Query: 244 THLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F M K +
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 367
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ MI G AMHG+ + +FS M + G+EPDD+ +VG+LSACSH+G+++ G F M
Sbjct: 368 WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 427
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
+Y++ P ++HYGC++DL+G +G+ EA E+I +M ++ + V+W SLL A K+H N+E+
Sbjct: 428 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELA 487
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E A+NL +I +PS Y+LLSN+YA A RW DVA+IR + K + + PG S +EV
Sbjct: 488 ESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSV 547
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V++FV D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KL
Sbjct: 548 VFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 607
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
AIAF LI G+ + I +NLR+C +CH TKL+S IY+REI+ RDR RFH F+DG CSC
Sbjct: 608 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSC 667
Query: 602 RDYW 605
DYW
Sbjct: 668 NDYW 671
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 195/380 (51%), Gaps = 35/380 (9%)
Query: 69 LVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
L+ C S H+ + YA S+F I EP +NT+IRG + +L LY M G+
Sbjct: 1 LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGL 60
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY----------- 176
P+++TFP L K+CAK + EG QIHG V K+GF+ DL+V SLI+MY
Sbjct: 61 LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120
Query: 177 ------------------GKCEKVEFASA--IFKQMDQKSVASWSAIIAAHASNGLWSEC 216
G + + SA +F ++ K V SW+A+I+ +A G + E
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L+LF EM RP+ES V+VLSAC H G+++LG+ H + + N+ + +LID
Sbjct: 181 LELFEEMMKMNV-RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALID 239
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y KCG +E LF+ ++ K ++++ +I G KEAL +F EMLR G P+DV
Sbjct: 240 LYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 299
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY-GCVVDLMGRAGMLGEALELIQS 395
+ VL AC+H G ++ G + + V ++D+ + G + A ++ S
Sbjct: 300 MLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 359
Query: 396 MPIQQNDVVWRSLLSASKVH 415
M + ++ W +++ +H
Sbjct: 360 M-LHKSLSSWNAMIFGFAMH 378
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 153/341 (44%), Gaps = 59/341 (17%)
Query: 24 ELNLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----S 76
++N+R E +T+L C ++E ++VH+ V GF SNL AL S
Sbjct: 189 KMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGF------DSNLKIVNALIDLYS 242
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
G ++ AC +F+ + +NTLI G+ ++EAL L+ EM G P++ T +
Sbjct: 243 KCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 302
Query: 137 LFKACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+ ACA L A+ G IH ++ K G ++ SLI+MY KC +E A +F M
Sbjct: 303 VLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLH 362
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
KS++SW+A+I A +G LF M P++ V +LSAC+H G LDLG+
Sbjct: 363 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-EPDDITFVGLLSACSHSGMLDLGR- 420
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGL 309
+FR M ++T Y MI L
Sbjct: 421 ----------------------------------HIFRSMTQDYKMTPKLEHYGCMIDLL 446
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
G KEA + + M +EPD V++ +L AC G V
Sbjct: 447 GHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNV 484
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/597 (39%), Positives = 348/597 (58%), Gaps = 35/597 (5%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMDYACSIFRQIDEPGAFDFNT 101
+ + K+ HA +L G + S+L+A A+S DYA SI+ I P F N
Sbjct: 43 GITQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNN 102
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+IR FVK ++ LY+ M V P+ T + +AC+ A++EG Q+ HV K+
Sbjct: 103 MIRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKL 162
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQ----------------------------- 191
GF D+FV+N+LI++Y C +VE A +F +
Sbjct: 163 GFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKL 222
Query: 192 ---MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
M +K V SW II+ NG + L F E+ +K RP E+ILVS+L+A LG
Sbjct: 223 FVEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKL-RPNEAILVSLLAAAAQLGT 281
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L+ GK H + + T+L+DMY KCGC+++ LF M +K + +++VMI G
Sbjct: 282 LEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICG 341
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
LA HG G+EAL++F + L +G P +V ++GVL+ACS AGLV+EG F M Y I P
Sbjct: 342 LATHGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEP 401
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
++HYGC+VDL+ RAG + +A+E+I MP + V+W S+L + +VH +E+GE L
Sbjct: 402 EMEHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKL 461
Query: 429 FQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQ 488
Q++ H YV L+ ++AR ++W DV+K+R MA + N+ G+SL+E +V++FV+
Sbjct: 462 IQMDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAG 521
Query: 489 DRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI 548
D+ H IY+M+ M ++ GYS ++S VL D++E+EK +K HS++LAIAF L+
Sbjct: 522 DKEHERTTEIYKMLEIMGVRIAAAGYSANVSSVLHDIEEEEKENAIKEHSERLAIAFGLL 581
Query: 549 HLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G IRI +NLR+C DCH +K+IS+++EREIIVRD RFH FK G CSC+DYW
Sbjct: 582 VTKDGDCIRIIKNLRVCGDCHEVSKIISLVFEREIIVRDGSRFHHFKKGICSCQDYW 638
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 144/355 (40%), Gaps = 77/355 (21%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCA---------------- 74
+L+ C N + E +V HV+K GF + F + L+ TC
Sbjct: 139 VLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSR 198
Query: 75 -LSHWGSM----------DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
+ W SM A +F ++ E + T+I G V+ E E+AL + E+
Sbjct: 199 DVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGCVQNGELEKALDYFKELG 258
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
E+ + P+ +L A A+L L+ G +IH + F + +L++MY KC ++
Sbjct: 259 EQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTALVDMYAKCGCID 318
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
+ +F +M +K SW+ +I A++GL E L LF + + + P + VL+AC
Sbjct: 319 ESRFLFDRMPEKDKWSWNVMICGLATHGLGQEALALFEKFLTQG-FHPVNVTFIGVLTAC 377
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-- 301
+ + G + +G F++M D +
Sbjct: 378 S-----------------------------------RAGLVSEGKHFFKLMTDTYGIEPE 402
Query: 302 ---YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
Y M+ L+ G +A+ + + M PD V++ VL +C G + G
Sbjct: 403 MEHYGCMVDLLSRAGFVYDAVEMINRM---PAPPDPVLWASVLGSCQVHGFIELG 454
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/519 (41%), Positives = 318/519 (61%), Gaps = 1/519 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F + + +NT+I G + E+AL + EM + PD+FT ++ A+
Sbjct: 192 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 251
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L +G +IHG+ + G++ D+F+ +SLI+MY KC +V+ + +F + Q SW++IIA
Sbjct: 252 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 311
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
NG++ E LK F +M K +P S++ AC HL L LGK HG +IR+
Sbjct: 312 CVQNGMFDEGLKFFQQMLIAKI-KPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 370
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV + ++L+DMY KCG + +F M ++++ MI G A+HG +A+S+F M
Sbjct: 371 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 430
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
EG++P+ V ++ VL+ACSHAGLV+E F+ M +YRI+P ++HY V DL+GR G L
Sbjct: 431 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 490
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
EA E I M I+ VW +LL+A +VH N+E+ E +K LF ++ + YVLLSN+Y
Sbjct: 491 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 550
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
+ A RW D K+R M KG+ + P S +E+ KV+ FV+ D+SHP +D I E + +
Sbjct: 551 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 610
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
Q++ EGY D ++VL DV+E++KR L HS++LAI F +I G+ IR+ +NLR+C
Sbjct: 611 EQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCV 670
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCHT TK IS I REI+VRD RFH FKDG CSC D+W
Sbjct: 671 DCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 191/415 (46%), Gaps = 39/415 (9%)
Query: 34 CLTILK---TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
C T+L+ + K+ + K++HA +L+ +P S +++ S+ + + IF
Sbjct: 8 CKTLLQNPSSVKSKSQAKQLHAQILRTSLP-SPSLLSTILSI--YSNLNLLHDSLLIFNS 64
Query: 91 I-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ P + ++IR + F +L + +M G PD+ FP++ K+C ++ L+
Sbjct: 65 LPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRF 124
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA---------------------- 187
G +HG + ++G DL+ N+L+NMY K +E +
Sbjct: 125 GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESY 184
Query: 188 -------IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+F+ M ++ + SW+ +I+ +A NG+ + L + EM N RP+ L SVL
Sbjct: 185 YLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADL-RPDSFTLSSVL 243
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
L GK HG IRN +V + +SLIDMY KC ++ +F M+ +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+++ +I+G +G E L F +ML ++P+ V + ++ AC+H ++ G +
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ R V +VD+ + G + A + M + + V W +++ +H
Sbjct: 364 -IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMEL-YDMVSWTAMIMGYALH 416
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 9/219 (4%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
L I NL + K++H + ++ G+ + F S+L+ A C +D +C +F +
Sbjct: 243 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT-----RVDDSCRVFYML 297
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N++I G V+ F+E L + +M ++P++ +F ++ ACA L L G
Sbjct: 298 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 357
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+HG++ + F+ ++F+ ++L++MY KC + A IF +M+ + SW+A+I +A +G
Sbjct: 358 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 417
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+ + LF M E +P ++VL+AC+H G +D
Sbjct: 418 HAYDAISLFKRMEVEGV-KPNYVAFMAVLTACSHAGLVD 455
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 346/573 (60%), Gaps = 6/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK C K L E ++VHA +LK GF N F + L+ A + G + A +F +
Sbjct: 126 SVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYA--NCGQIGVARHVFDGMP 183
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N+++ G+ K ++E + L+ ++ E +E D+ T ++ AC +L L+ G
Sbjct: 184 ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGEL 243
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
I ++ G + + SLI+MY KC +V+ A +F +MD++ V +WSA+I+ +A
Sbjct: 244 IGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADR 303
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L LF EM + P E +VSVL +C LGA + GK H + + L V + T
Sbjct: 304 CKEALNLFHEMQKGNVY-PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LID Y KCG +++ + +F+ M+ K T++ +I GLA +G+GK AL FS ML ++P
Sbjct: 363 QLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKP 422
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+DV ++GVLSACSHA LV++G F+ M+ ++ I P ++HYGC+VD++GRAG L EA +
Sbjct: 423 NDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQF 482
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I +MP N VVWR+LL++ + H N+E+ E + +++ ++ H DY+LLSN YA R
Sbjct: 483 IDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRV 542
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
D ++R+ + K + + PG SL+E+ V++F S+D H I++ + +M Q+K
Sbjct: 543 EDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRL 602
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P+ + +E+ K + HS+KLAIA+ LI S + IRI++NLRMC DCH T
Sbjct: 603 GYVPNTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNAT 662
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS ++ER IIVRDR RFH FKDG CSC DYW
Sbjct: 663 KFISQVFERMIIVRDRNRFHHFKDGLCSCNDYW 695
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/375 (32%), Positives = 213/375 (56%), Gaps = 3/375 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
IL+ CK ++ ++VHAH+LK +P ++ + AL ++DYA SIF ID+P +
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPES 86
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +IRG + + AL L+ +M E+ V+ D FTF ++ KAC++++AL+EG Q+H
Sbjct: 87 SAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHAL 146
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ K GF+ + FV+N+LI MY C ++ A +F M ++S+ +W+++++ + NGLW E
Sbjct: 147 ILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEV 206
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+KLF ++ + ++ ++SVL AC L L++G+ ++ N + TSLID
Sbjct: 207 VKLFRKILELRI-EFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLID 265
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KCG ++ LF M + + +S MISG A + KEAL++F EM + + P++V
Sbjct: 266 MYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVT 325
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V VL +C+ G G +K + ++ TV ++D + G + ++E+ + M
Sbjct: 326 MVSVLYSCAMLGAYETGKWVHFYIK-KKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEM 384
Query: 397 PIQQNDVVWRSLLSA 411
+N W +L+
Sbjct: 385 SF-KNVFTWTALIQG 398
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/586 (40%), Positives = 352/586 (60%), Gaps = 10/586 (1%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R EQ CL +L+ + A +LK G NP + L A A + ++ S
Sbjct: 28 RAAEQHCLRLLERSSTPASLLQSFAFLLKSGLHSNPLVVTRLFAASASAAPALLEPLVSS 87
Query: 88 FRQIDEP-GAFDFNTLIRGFVKE---VEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
P AF NTLIR V A + M V P+ FTFP L K+CA
Sbjct: 88 LLGPSLPLDAFLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAA 147
Query: 144 LQALKE-GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF---ASAIFKQMDQKSVAS 199
L + G+Q H K GF D +V N+LI+MY C F A +F++M ++S +
Sbjct: 148 LPGSPDVGLQAHAAALKFGFAADHYVSNTLIHMY-SCFGAGFLGDARNVFERMPRESAVT 206
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
WSA+I + GL S+ + LF M RP+E ++ VL+A LGAL+L + +
Sbjct: 207 WSAMIGGYVRAGLSSDAVVLFRGMQVSGV-RPDEVTVIGVLAAAADLGALELTRWVGRFV 265
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
R +V + +LID KCG ++ + +F M ++ ++++ +I LAM G+GKEA+
Sbjct: 266 EREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAV 325
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F EM G+ PDDV ++GVL+ACSHAG+V+EG FD MK EY I P ++HYGC+VD+
Sbjct: 326 GVFEEMKAVGVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDM 385
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
GRAGM+ + LE +++MP++ N ++WR+L++A + H LE+GE +NL H ++Y
Sbjct: 386 FGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANY 445
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
V+LSN+YA QRW + ++IR EM+ +G+ + PG SLVE+ +V++F++ D SHP + IY
Sbjct: 446 VMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHPQYKEIY 505
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
M+ +M +L+ G+ S+VL D+DE++K L+ HS+KLAIAF L+ G+ +R+
Sbjct: 506 RMVEEMSRELRRIGHIAATSEVLLDLDEEDKEGALQWHSEKLAIAFVLLRTPPGTQVRVV 565
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH K IS +Y REI+VRDR RFHRFKDG+CSC+D+W
Sbjct: 566 KNLRVCSDCHAAIKCISQVYNREIVVRDRSRFHRFKDGSCSCKDFW 611
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/582 (37%), Positives = 353/582 (60%), Gaps = 6/582 (1%)
Query: 27 LRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
++ E L +L C L+ K++H + + G N A+ +A A + G++
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIA--AYTRCGALCS 360
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
+ +F +D +N L+ G+ + + +AL LY +M + G++PD FT +L AC++
Sbjct: 361 SERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+++L G +IHG + G D F+ SL+++Y C K A +F M+ +S+ SW+ +
Sbjct: 421 MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVM 480
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA ++ NGL E + LF +M ++ +P E ++ V AC+ L AL LGK H ++
Sbjct: 481 IAGYSQNGLPDEAINLFRQMLSDGI-QPYEIAIMCVCGACSQLSALRLGKELHCFALKAH 539
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++ V +S+IDMY K GC+ +F + +K +++V+I+G +HG+GKEAL +F
Sbjct: 540 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFE 599
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+MLR GL+PDD + G+L ACSHAGLV +GL F++M + I P ++HY CVVD++GRA
Sbjct: 600 KMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRA 659
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G + +AL LI+ MP + +W SLLS+ ++H NL +GE A L ++ P +YVL+S
Sbjct: 660 GRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLIS 719
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N++A + +W DV ++R M GL + G S +EV KV+ F+ D P + + E
Sbjct: 720 NLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWR 779
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E ++ GY+PD VL D++E++K L+GHS+KLAI+F L++ ++G P+R+ +NLR
Sbjct: 780 RLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLR 839
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH K IS + R+I+VRD KRFH F+DG CSC DYW
Sbjct: 840 ICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 8/316 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+L+ C K++E +++H V F N F + + T S GS + +F ++
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIIT-MYSMCGSPSDSRMVFDKLR 61
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQALKEGM 151
F +N ++ + + FE+A+ +++E+ +PDNFT P + KACA L L G
Sbjct: 62 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IHG K+ D+FV N+LI MYGKC VE A +F+ M ++++ SW++II + NG
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 212 LWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
E F EM E+ + P+ + LV+VL C ++ G HG ++ ++V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG- 329
SLIDMY KC L + LF K ++++ MI G A + +M E
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 330 -LEPDDVVYVGVLSAC 344
++ D+ + VL C
Sbjct: 302 KMKADEFTILNVLPVC 317
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 141/278 (50%), Gaps = 5/278 (1%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS-LINMYGKCEKVEFASAIFKQMDQK 195
L +AC + + ++ G ++H V C+ FV N+ +I MY C + +F ++ +K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ W+AI++A+ N L+ + + +F E+ + +P+ L V+ AC L L LG+
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG + +V V +LI MY KCG +E+ + +F M ++ ++++ +I G + +G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 316 KEALSIFSEML--REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+E+ + F EML E PD V VL C+ + +G + + ++ + +
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKG-MAVHGLAVKLGLNEELMVN 242
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + L EA +L+ ++N V W S++
Sbjct: 243 NSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGG 279
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 343/573 (59%), Gaps = 8/573 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + K L + +H + + GF + A+ ++ T GS+ A +F+ +
Sbjct: 250 LPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDT--YFKCGSVRSARLVFKGMSSR 307
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+NT+I G+ + E EEA + +M + GVEP N + ACA L L+ G +H
Sbjct: 308 NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH 367
Query: 155 GHV--FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+ K+GF D+ V NSLI+MY KC++V+ A+++F + K+V +W+A+I +A NG
Sbjct: 368 RLLDEKKIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGC 425
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E L LF EM + +P+ LVSV++A L K HG IR + NV V T
Sbjct: 426 VNEALNLFCEMQSHDI-KPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCT 484
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LID + KCG ++ LF +M ++ +T++ MI G +G G+EAL +F+EM ++P
Sbjct: 485 ALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKP 544
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+++ ++ V++ACSH+GLV EG+ F+ MK Y + PT+ HYG +VDL+GRAG L +A +
Sbjct: 545 NEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKF 604
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ MP++ V ++L A ++H N+E+GE A LF ++ +VLL+NMYA A W
Sbjct: 605 IQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMW 664
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
VA++RT M KG+ ++PG SLVE+ +V+ F S +HP IY + + ++K
Sbjct: 665 DKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAA 724
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD + + DV+ED K + L HS++LAIAF L++ G+ I I +NLR+C DCH T
Sbjct: 725 GYVPDTNSI-HDVEEDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEAT 783
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS++ REIIVRD +RFH FK+G CSC DYW
Sbjct: 784 KYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 238/497 (47%), Gaps = 38/497 (7%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ C +L+E ++ ++K GF+ + L++ + S+ A +F ++
Sbjct: 50 LLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISL--FCKFNSITEAARVFEPVEHKLD 107
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
++T+++G+ K +A+ Y M V P + F L + + L+ G +IHG
Sbjct: 108 VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGM 167
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V GF+ +LF +++N+Y KC ++E A +F++M Q+ + SW+ ++A +A NG
Sbjct: 168 VITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRA 227
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+++ +M E +P+ LVSVL A L AL +G+ HG R V V T+++D
Sbjct: 228 VQVVLQM-QEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLD 286
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y KCG + +F+ M+ + ++++ MI G A +G+ +EA + F +ML EG+EP +V
Sbjct: 287 TYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVS 346
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+G L AC++ G + G R+ E +I V ++ + + + A + ++
Sbjct: 347 MMGALHACANLGDLERGRYVH-RLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNL 405
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF-QINSH--HPSDYVLLSNMYA------ 447
+ V W +++ N + E A NLF ++ SH P + L+S + A
Sbjct: 406 K-HKTVVTWNAMILGYA--QNGCVNE--ALNLFCEMQSHDIKPDSFTLVSVITALADLSV 460
Query: 448 -RAQRWYDVAKIRTEM------ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
R +W IRT M + ++ ++ ARK++ + Q+R
Sbjct: 461 TRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLM-QER---------- 509
Query: 501 MIHQMEWQLKFEGYSPD 517
H + W +GY +
Sbjct: 510 --HVITWNAMIDGYGTN 524
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 215/477 (45%), Gaps = 59/477 (12%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+L +++H V+ GF N F + NL A C ++ A +F ++ + +
Sbjct: 157 DLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCR-----QIEDAYKMFERMPQRDLVSW 211
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
NT++ G+ + A+ + +M E G +PD+ T ++ A A L+AL+ G IHG+ F+
Sbjct: 212 NTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFR 271
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
GFE + V ++++ Y KC V A +FK M ++V SW+ +I +A NG E
Sbjct: 272 AGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFAT 331
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F +M +E P ++ L AC +LG L+ G+ H L +V V SLI MY
Sbjct: 332 FLKMLDEGV-EPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYS 390
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KC ++ +F + K +T++ MI G A +G EAL++F EM ++PD V
Sbjct: 391 KCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVS 450
Query: 340 VLSAC---------------------------------SHA--GLVNEGLLCFDRMKLEY 364
V++A +HA G + FD M+ +
Sbjct: 451 VITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERH 510
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSASKVHHNLEIG 421
I + ++D G G EAL+L M ++ N++ + S+++A +E G
Sbjct: 511 VIT-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEG 565
Query: 422 EIAAKNLFQINSHHPS--DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
+++ + P+ Y + ++ RA R D K +M K PG +++
Sbjct: 566 MYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVK-----PGITVL 617
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/576 (38%), Positives = 349/576 (60%), Gaps = 11/576 (1%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
++LK C L EFK +H V+K+ + + + N+ A C G + A +F
Sbjct: 84 SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC-----GDLKSARFLFE 138
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + ++I G++K EAL LY +M E G PD T L ACA+L+ L
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
GM++H H+ ++ + + ++L+NMY KC ++ A +F ++ K V +WSA+I +
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVK 258
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N +E L+LF E+ RP E +++V+SAC LG L+ G+ H + R +V
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ SLIDM+ KCG ++ +F M+ K ++++ M++G A+HG G+EAL+ F M
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD 378
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L+PD++ ++GVL+ACSHAGLV EG F ++ Y + +HYGC+VDL+ RAG+L EA
Sbjct: 379 LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEA 438
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E I+ MP+Q + +W S+L A +V++NLE+GE AA+ L ++ + Y+LLSN+YA+
Sbjct: 439 REFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKR 498
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+ W +V K+R M KG+ ++PG S V + + F++ D SHP I M+ Q+ +L
Sbjct: 499 KMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKL 558
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY D S+VL ++D+++K E + HS+KLA+ + L+ G I I +NLR+C+DCH
Sbjct: 559 KLAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCH 618
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T KL+S IY+R+I +RDR RFH FKDG+CSCRDYW
Sbjct: 619 TLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 181/367 (49%), Gaps = 6/367 (1%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKAC 141
YA S+F E +N+++R FV AL Y EM ER PD FTFP+L K C
Sbjct: 30 YAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A L K G +HG V K DL+++ +L+NMY C ++ A +F++M ++ W+
Sbjct: 90 ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++I+ + N +E L L+ +M E + P+E + +++SAC L L +G H +
Sbjct: 150 SMISGYMKNHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ ++ ++L++MY KCG L+ +F ++DK +S +I G + + EAL +
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 322 FSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
F E+ + P++V + V+SAC+ G + G D + + +V ++D+
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMF 327
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
+ G + A + SM ++ + W S+++ + H L +A L Q P +
Sbjct: 328 SKCGDIDAAKRIFDSMS-YKDLISWNSMVNGFAL-HGLGREALAQFRLMQTTDLQPDEIT 385
Query: 441 LLSNMYA 447
+ + A
Sbjct: 386 FIGVLTA 392
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 86/164 (52%)
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V +A ++F + V +W++++ A ++ + L+ + EM P+ S+L
Sbjct: 28 VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C L +GK HG +++ + ++ +ET+L++MY CG L+ LF M + ++
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
++ MISG + EAL ++ +M +G PD+V ++SAC+
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 350/568 (61%), Gaps = 6/568 (1%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+++ C+++ +++HA +L + F ++ CALS +G +DYA +F QI P
Sbjct: 63 LIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRP 122
Query: 95 GAFDFNTLIRGFVK-EVEFEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQALKEGMQ 152
F +N++IRG + + +E + L+ +M RG P+ FT + KAC+ + AL+EG Q
Sbjct: 123 NIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQ 182
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H +V K GF FV+ +L+N Y KCE + AS +F ++ +++ +WS +I+ +A GL
Sbjct: 183 VHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGL 242
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E L LF +M P+E +VSV+SAC GALD GK H + + + ++ + T
Sbjct: 243 VNEALGLFRDMQKAGV-VPDEVTMVSVISACAASGALDTGKWVHAYINKQLIETDLELST 301
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L++MY KCGC+E+ +F M K +S MI GLA++G ++AL F M ++P
Sbjct: 302 ALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKP 361
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V ++GVLSAC+H+GLV+EG + M LE+ IVP+++ YGC+VDL+ RA ++ +A L
Sbjct: 362 NHVTFIGVLSACAHSGLVSEGRRYWSSM-LEFGIVPSMELYGCMVDLLCRASLVEDACTL 420
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+++MPI N V+WR+LL K NL+ E+ A+ L ++ H+ +Y+LLSN+YA +W
Sbjct: 421 VETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQW 480
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
++++R +M G+ PG S +EV V++FV D SHP + E++ + ++
Sbjct: 481 EKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMGDWSHPEAMEVREILRDISKRVHAV 540
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
G+ P IS VL +V ++EK L HS++LAIA+ L+ IRI +NLR+C DCH T
Sbjct: 541 GHQPGISDVLHNVVDEEKENALCEHSERLAIAYGLLKTKTPMAIRIVKNLRVCGDCHEVT 600
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCS 600
K+IS Y REIIVRDR RFH+F +G+CS
Sbjct: 601 KIISAEYRREIIVRDRVRFHKFVNGSCS 628
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/603 (38%), Positives = 359/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K E +++H HVLK G+ + + ++L++
Sbjct: 109 LLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD 168
Query: 72 ----TCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + S Y S + DE D +N +I G+ + +EAL L+ EM +
Sbjct: 169 VVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMK 228
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T ++ ACA+ +++ G Q+H + GF +L + N+LI++Y KC +VE
Sbjct: 229 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ESPNDVTMLSILPACA 347
Query: 245 HLGALDLGKCTHGSLIRNISALNVIV--ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+++G+ H + + + + TSLIDMY KCG +E +F + ++ ++
Sbjct: 348 HLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSW 407
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A IFS M + +EPDD+ +VG+LSACSH+G+++ G F MK
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 467
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y+I P ++HYGC++DL+G +G+ EA E+I +M ++ + V+W SLL A K++ N+E+GE
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGE 527
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW +VAKIR + KG+ + PG S +E+ V
Sbjct: 528 SYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVV 587
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 588 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 647
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 648 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 707
Query: 603 DYW 605
DYW
Sbjct: 708 DYW 710
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 131/421 (31%), Positives = 219/421 (52%), Gaps = 39/421 (9%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIF 88
+ L++L CK L+ + +HA ++K G + S L+ C LS H+ + YA S+F
Sbjct: 1 RNHPSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVF 60
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I EP +NT+ RG + AL+LY M G+ P+ +TFP L K+CAK +A +
Sbjct: 61 ETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFR 120
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
EG QIHGHV K+G++ DL+V SLI+MY + ++E A +F Q + V S++A+I +A
Sbjct: 121 EGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYA 180
Query: 209 SNGLWSECLKLFGEM-------------------NNEKCW-----------RPEESILVS 238
S G + K+F E+ NN++ RP+ES +VS
Sbjct: 181 SKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVS 240
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
V+SAC +++LG+ H + + N+ + +LID+Y+KCG +E LF ++ K
Sbjct: 241 VVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKD 300
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG----L 354
++++ +I G KEAL +F EMLR G P+DV + +L AC+H G + G +
Sbjct: 301 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHV 360
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
R+K + H ++D+ + G + A ++ S+ + ++ W +++ +
Sbjct: 361 YINKRLK---GVANASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAM 416
Query: 415 H 415
H
Sbjct: 417 H 417
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/574 (37%), Positives = 344/574 (59%), Gaps = 6/574 (1%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L C N L +++H+ V+K GF ++ + L++ A GS+ A +F ++
Sbjct: 450 VILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYA--RCGSIKDARLLFNKM 507
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +I G K EAL ++ +M + G++P+ T+ ++ AC+ AL G
Sbjct: 508 VRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGR 567
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH V + G D V N+L+NMY C V+ A +F +M Q+ + +++A+I +A++
Sbjct: 568 RIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L E LKLF + E +P++ +++L+AC + G+L+ K H ++++ + +
Sbjct: 628 LGKEALKLFDRLQEEGL-KPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLG 686
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+ Y KCG L +F M + ++++ +I G A HG+G++ L +F M EG++
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIK 746
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V +V +LSACSHAGL+ EG F M ++ I PT++HYGC+VDL+GRAG L E
Sbjct: 747 PDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEA 806
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI++MP Q N +W +LL A ++H N+ + E AA++ +++ + + YV LS+MYA A
Sbjct: 807 LIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGM 866
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W AK+R M +G+ + PG S +EV K++ FV++DRSHP + IY + ++ +K
Sbjct: 867 WDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKM 926
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY PD V+ DVDE EK + HS++LAIA+ LI G+PIRI +NLR+C DCHT
Sbjct: 927 EGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTA 986
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK I+ I +REI+ RD RFH FKDG CSC DYW
Sbjct: 987 TKFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 5/368 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K VH+H+L G + + LV A GS +F ++ +NT+I G
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKC--GSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +EEA +Y++M G+ P+ T+ L AC AL G +IH V K GF D+
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
VQN+LI+MY +C ++ A +F +M +K + SW+A+I A +GL +E L +F +M +
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM-QQA 541
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P S+L+AC+ ALD G+ H +I A + V +L++MY CG ++
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDA 601
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M + + Y+ MI G A H GKEAL +F + EGL+PD V Y+ +L+AC+++
Sbjct: 602 RQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 661
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G + E + L+ + +V + G +AL + M +++N + W +
Sbjct: 662 GSL-EWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNA 719
Query: 408 LLSASKVH 415
++ H
Sbjct: 720 IIGGCAQH 727
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 194/398 (48%), Gaps = 15/398 (3%)
Query: 27 LRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWN---PFCASNLVATCALSHWGS 80
L L + +L +CK+ LE +++H +K ++ C N+ A C GS
Sbjct: 240 LALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKC-----GS 294
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ A +F +++ + +I G+ E A ++ +M + GV P+ T+ + A
Sbjct: 295 IHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
+ ALK G +H H+ G E DL V +L+ MY KC + +F+++ + + +W
Sbjct: 355 FSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAW 414
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+ +I A G W E +++ +M E P + V +L+AC + AL G+ H ++
Sbjct: 415 NTMIGGLAEGGNWEEASEIYHQMQREGMM-PNKITYVILLNACVNPTALHWGREIHSRVV 473
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
++ ++ V+ +LI MY +CG ++ LF M K ++++ MI GLA G G EAL+
Sbjct: 474 KDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALA 533
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F +M + GL+P+ V Y +L+ACS ++ G ++ +E + +V++
Sbjct: 534 VFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV-IEAGLATDAHVANTLVNMY 592
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
G + +A ++ M Q D+V + + HNL
Sbjct: 593 SMCGSVKDARQVFDRMT--QRDIVAYNAMIGGYAAHNL 628
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 201/426 (47%), Gaps = 49/426 (11%)
Query: 28 RLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSM 81
R+ + + +LK C K+L ++VH H+++ + + + N+ C GS+
Sbjct: 138 RVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQC-----GSI 192
Query: 82 DYACSIFRQID--EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ A ++ +++ E +N ++ G+V+ EEAL L EM + G+ T L
Sbjct: 193 EEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLS 252
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
+C AL+ G +IH K D+ V N ++NMY KC + A +F +M+ KSV S
Sbjct: 253 SCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVS 312
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+ II +A G ++F +M E P ++VL+A + AL GK H +
Sbjct: 313 WTIIIGGYADCGHSEIAFEIFQKMQQEGV-VPNRITYINVLNAFSGPAALKWGKTVHSHI 371
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+ ++ V T+L+ MY KCG + +F + ++ + ++ MI GLA G +EA
Sbjct: 372 LNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEAS 431
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGLLCFD---------- 358
I+ +M REG+ P+ + YV +L+AC H+ +V +G + FD
Sbjct: 432 EIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM-FDISVQNALISM 490
Query: 359 ----------RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP---IQQNDVVW 405
R+ + + + ++ + ++G+ EAL + Q M ++ N V +
Sbjct: 491 YARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTY 550
Query: 406 RSLLSA 411
S+L+A
Sbjct: 551 TSILNA 556
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
+ A+ + + ++G ++ + + K C +++ L G ++H H+ + D + N+L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 173 INMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
INMY +C +E A ++ +++ +++V SW+A++ + G E LKL EM
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
+ + +LS+C AL+ G+ H ++ +V V +++MY KCG + + +
Sbjct: 243 GRATTM-RLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
F M K ++++++I G A G + A IF +M +EG+ P+ + Y+ VL+A S
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/527 (41%), Positives = 320/527 (60%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + YA IF P F +NT+IRG+ A+ LY +MF G+ P+++TF +
Sbjct: 15 GHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVL 74
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC KL L EG ++H + K G + + + N LI +Y C +++A +F +M + A
Sbjct: 75 NACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSA 134
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SWS +++ ++ NG E LKL EM E + L SV+ C LG LDLGK H
Sbjct: 135 SWSTMVSGYSQNGQAVETLKLLREMQAENV-SSDAFTLASVVGVCGDLGVLDLGKWVHSY 193
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ + ++V++ T+L+ MY KCG L+ L +F+ MA++ T+S+MI+G A+HG ++A
Sbjct: 194 IDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKA 253
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F M R + P+ V + VLSA SH+GLV +G F+ M EY+I P ++HYGC+VD
Sbjct: 254 LQLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVD 313
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L RAGM+G A + IQ+MPI+ N V+WR+LL A K H +GE ++ + +++ P +
Sbjct: 314 LFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPEN 373
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YV +SN+YA RW V ++R+ M K + G+S +E+ V+KF+ + SHP + I
Sbjct: 374 YVFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKI 433
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y M+HQM +LK G+ VL D+DE+EK L HS++LAIA+ L+H GSPIRI
Sbjct: 434 YGMLHQMARKLKQVGHVASTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRI 493
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR C DCH KLIS +Y REII+RDR FH F++ CSC DYW
Sbjct: 494 VKNLRACRDCHEVIKLISEVYNREIILRDRVCFHHFRERGCSCNDYW 540
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/598 (38%), Positives = 345/598 (57%), Gaps = 34/598 (5%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS-MDYACSIFRQIDEPGAFDF 99
C EE K++HA +LK G + + + ++ C S + YA +F D P F +
Sbjct: 53 CSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLW 112
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N +IRGF E E +L LY M + +TFP+L KAC+ L AL+E QIH + K
Sbjct: 113 NLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITK 172
Query: 160 VGFECDLFVQNSLINMYG-------------------------------KCEKVEFASAI 188
+G+E D++ NSLIN Y K K++ A +
Sbjct: 173 LGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTL 232
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F++M +K+ SW+ +I+ + G+ E L+LF EM N P+ L + LSAC LGA
Sbjct: 233 FRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDV-EPDNVSLANALSACAQLGA 291
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L+ GK H L + ++ ++ LIDMY KCG + + L +F+ + K ++ +ISG
Sbjct: 292 LEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISG 351
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
A HG G+EA+S F EM + G++P+ + + VL+ACS+ GLV EG L F M+ +Y + P
Sbjct: 352 YAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKP 411
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
T++HYGCVVDL+ RAG+L EA IQ MP++ N V+W +LL A ++H N+E+GE + L
Sbjct: 412 TIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEIL 471
Query: 429 FQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQ 488
I+ +H YV +N++A ++W A+ R M +G+ + PG S + + ++F++
Sbjct: 472 IAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAG 531
Query: 489 DRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL-KGHSQKLAIAFAL 547
DRSHP + I M +L+ GY P++ +L D+ +D++RE + HS+KLAI + L
Sbjct: 532 DRSHPEIEKIQSKWKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGL 591
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I G+ IRI +NLR+C DCH TKLIS IY+R+I++RDR RFH F+DG CSC DYW
Sbjct: 592 IKTKPGTTIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 144/285 (50%), Gaps = 34/285 (11%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCA------LSH--------- 77
++LK C NL EE ++HA + K G+ + + ++L+ + A L+H
Sbjct: 149 SLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKP 208
Query: 78 ----W----------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
W G MD A ++FR++ E A + T+I G+V+ +EAL L++EM
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
VEPDN + ACA+L AL++G IH ++ K D + LI+MY KC +
Sbjct: 269 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMG 328
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +FK + +KSV +W+A+I+ +A +G E + F EM +P +VL+AC
Sbjct: 329 EALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI-KPNVITFTTVLTAC 387
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEKG 287
++ G ++ GK ++ R+ + I ++D+ + G L++
Sbjct: 388 SYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEA 432
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 345/580 (59%), Gaps = 6/580 (1%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TCALSHWGSMDYACS 86
R K E ++ +L ++ HAH++ G + + L+ +CA GS+ Y
Sbjct: 7 RRKSAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAA---GSIAYTRR 63
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+FR + +P +F FN+LI+ +A+F Y M + P +TF ++ KACA L
Sbjct: 64 LFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSL 123
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L+ G +H HVF G+ + FVQ +L+ Y K A +F +M Q+S+ +W+++I+
Sbjct: 124 LRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISG 183
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NGL SE +++F +M E P+ + VSVLSAC+ LG+LDLG H ++ +
Sbjct: 184 YEQNGLASEAVEVFNKMR-ESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRM 242
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV++ TSL++M+ +CG + + +F M + ++++ MISG MHG G EA+ +F M
Sbjct: 243 NVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMK 302
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ P+ V YV VLSAC+HAGL+NEG L F MK EY +VP V+H+ C+VD+ GR G+L
Sbjct: 303 ACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLL 362
Query: 387 GEALELIQSMPIQQ-NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
EA + ++ + ++ VW ++L A K+H N ++G A+NL +P YVLLSNM
Sbjct: 363 NEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNM 422
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA A R V +R M +GL + G+S ++V + Y F D+SHP + IY + ++
Sbjct: 423 YALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKSHPETNEIYCYLDEL 482
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
W+ K GY+P + +++E+E+ L+ HS+KLA+AF L+ G +RI +NLR+C
Sbjct: 483 MWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTCHGVTLRIVKNLRIC 542
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH+ K ISV+ REIIVRD+ RFH F++G+CSC DYW
Sbjct: 543 EDCHSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/543 (41%), Positives = 328/543 (60%), Gaps = 5/543 (0%)
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--E 124
+ L ALS G + YA I + +F NT+IR + + + +AL L+ M
Sbjct: 30 TPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLCQP 89
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
PD FT+P L K+CA+L+ + G Q+HG ++K G E D +V N LI+MY C K
Sbjct: 90 TSPRPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGR 149
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F +M + V SW+++I + E ++LF EM E P E+ +VSVL AC
Sbjct: 150 AYKVFGKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMV-EDGVEPNEATVVSVLRACA 208
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
GA+ +G+ G + L V T+LIDMY KCG + +F + +K ++
Sbjct: 209 DAGAVGMGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTA 268
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MISGLA HG +EA+++F +M GL PD+ VLSAC +AG +EG F+ M +Y
Sbjct: 269 MISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKY 328
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE-- 422
I PT+QHYGC+VDL+ R G L EA E I+ MPI+ + V+WR+L+ ASKVH +++ E
Sbjct: 329 GIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQL 388
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
+ + L +++S YVLL N+YA A +W+D AK+R M KGL++ PG S +EV V
Sbjct: 389 MKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLV 448
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F + D H + IY + ++E +LK EGY P +S+VL ++D EK +L+ HS+KLA
Sbjct: 449 HEFAAGDSGHIEAEKIYAKLDEVEERLKAEGYHPKLSEVLLEIDNKEKAFQLRHHSEKLA 508
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+AF LI S G+ IRI +NLR C DCH+ KLIS IY+++IIVRDR RFH F +G CSC+
Sbjct: 509 VAFGLIKTSPGTEIRIVKNLRSCEDCHSVLKLISKIYQQDIIVRDRIRFHHFINGDCSCK 568
Query: 603 DYW 605
DYW
Sbjct: 569 DYW 571
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 347/573 (60%), Gaps = 7/573 (1%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C +L E ++VH+ V+ G + + ++L+A A +G M A +F ++ E
Sbjct: 167 VLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYA--KFGDMGTARMVFDRMAE 224
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT+I G+ K + A +++ M + G+ D T L ACA L+A+KEG I
Sbjct: 225 RDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVI 284
Query: 154 HGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
HG+ + + F NSLI MY C + A +F+++ K SW+++I +A NG
Sbjct: 285 HGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGD 344
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L+LF M + P++ ++VL AC + AL G H L++ N IV T
Sbjct: 345 AFESLRLFRRMALDGSG-PDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG L +F M DK +++S M++G +HG+G+EA+SI M + P
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIP 463
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D+ V+ +LSACSHAGLV EG F +M+ EY + P + HY C+VDL+GRAG L EA +
Sbjct: 464 DNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVI 523
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I++M I+ +W +LL+AS++H N+++ EI+A+ +F +N S Y+ LSN+YA +RW
Sbjct: 524 IRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRW 583
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DV ++R + KGL +SPG S +E+ V++F+ D+SH ++IY +++++ QLK
Sbjct: 584 DDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEA 643
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD S V DV+E+ K + L HS++LAIAFALI+ G+ IRI +NLR+C DCHT T
Sbjct: 644 GYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVT 703
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS + REII+RD RFH F G CSC DYW
Sbjct: 704 KLISELTGREIIMRDIHRFHHFIKGFCSCGDYW 736
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 190/392 (48%), Gaps = 10/392 (2%)
Query: 29 LKEQECLTILKTCKNLEEFKK---VHAHVLKWGFFWN-PFCASNLVATCALSHWGSMDYA 84
L +C +L++ N + FK+ +HAH++ + N + + L A A G M A
Sbjct: 57 LTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYA--GCGLMSQA 114
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
IF I +F +N +IRG+ ++L LY EM G DNFT+P + KAC L
Sbjct: 115 EVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL 174
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
++ G ++H V G E D++V NSL+ MY K + A +F +M ++ + SW+ +I
Sbjct: 175 LLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMI 234
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-I 263
+ +A N +F M + + + L+ +LSAC L A+ GK HG +RN I
Sbjct: 235 SGYAKNADSGTAFLVFDLMGKAGLF-ADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSI 293
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N SLI+MY C C+ LF + K ++++ MI G A +G E+L +F
Sbjct: 294 GNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFR 353
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M +G PD V ++ VL AC + G+ + + T+ +VD+ +
Sbjct: 354 RMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTA-LVDMYSKC 412
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G L + + MP ++ V W ++++ +H
Sbjct: 413 GSLACSRRVFDEMP-DKSLVSWSAMVAGYGLH 443
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/579 (37%), Positives = 342/579 (59%), Gaps = 17/579 (2%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGF-----FWNPFCASNLVATCALSHWGSMDYACS 86
++ILKTC +L E K +H V+K G WN N+ A C GS +YAC
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLV--NVYAKC-----GSANYACK 247
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F +I E + LI GFV E + L ++N+M G P+ +TF ++ ++C+ L
Sbjct: 248 VFGEIPERDVVSWTALITGFVAE-GYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD 306
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G Q+H + K + + FV +L++MY K +E A IF ++ ++ + +W+ I+A
Sbjct: 307 VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAG 366
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+A +G + +K F +M E +P E L S LS C+ + LD G+ H I+ +
Sbjct: 367 YAQDGQGEKAVKCFIQMQREGV-KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ V ++L+DMY KCGC+E +F + + ++++ +I G + HGQG +AL F ML
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
EG PD+V ++GVLSACSH GL+ EG F+ + Y I PT++HY C+VD++GRAG
Sbjct: 486 DEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKF 545
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
E I+ M + N ++W ++L A K+H N+E GE AA LF++ S+Y+LLSNM+
Sbjct: 546 HEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMF 605
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A W DV +R M+++G+ + PG S VEV +V+ F+S D SHP I+ + +
Sbjct: 606 AAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLH 665
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+L GY+P+ VL +V + EK+E L HS++LA+AFAL+ S IRI +NLR+C
Sbjct: 666 QKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICG 725
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + K IS I +E++VRD FH FK+G+CSC+++W
Sbjct: 726 DCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 181/368 (49%), Gaps = 6/368 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +HA V K+GF + ++ V + S++ F+ + N L+ GF
Sbjct: 110 ESIHACVCKYGFESDILISNAFVTMYMKTQ--SVENGWQFFKAMMIENLASRNNLLSGFC 167
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ + ++ G EP+ +TF ++ K CA L EG IHG V K G D
Sbjct: 168 DTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSH 227
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ NSL+N+Y KC +A +F ++ ++ V SW+A+I + G + L++F +M E
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEG 286
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ P +S+L +C+ L +DLGK H +++N N V T+L+DMY K LE
Sbjct: 287 -FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA 345
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F + + ++V+++G A GQG++A+ F +M REG++P++ LS CS
Sbjct: 346 ETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI 405
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
++ G M ++ + +VD+ + G + +A E++ + ++ V W +
Sbjct: 406 ATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNT 463
Query: 408 LLSASKVH 415
++ H
Sbjct: 464 IICGYSQH 471
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 2/242 (0%)
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
+EA+ L+ M + + F F +L A A L G IH V K GFE D+ + N+
Sbjct: 71 LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+ MY K + VE FK M +++AS + +++ + ++ ++ E + P
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEG-FEP 189
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+S+L C G L+ GK HG +I++ + + SL+++Y KCG +F
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ ++ ++++ +I+G G G L IF++ML EG P+ ++ +L +CS V+
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 308
Query: 352 EG 353
G
Sbjct: 309 LG 310
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 124/255 (48%), Gaps = 3/255 (1%)
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G D + +SL+N+Y KCE ++ A + ++M + V W+ +++ S E
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++LF M + + R + I S++SA LG G+ H + + ++++ + +
Sbjct: 75 VQLFYLMRHTRI-RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY+K +E G F+ M + + + ++SG + I ++L EG EP+
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ +L C+ G +NEG ++ ++ I P + +V++ + G A ++ +
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQV-IKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252
Query: 397 PIQQNDVVWRSLLSA 411
P +++ V W +L++
Sbjct: 253 P-ERDVVSWTALITG 266
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 220/568 (38%), Positives = 342/568 (60%), Gaps = 15/568 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L+++ C ++ K++HA +L+ G F++PF AS L+ ALS + S+DYA +F QI P
Sbjct: 39 LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHP 98
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKEGMQI 153
+ +NTLIR + ++L ++ M + + PD FTFP L KA ++L+ L G
Sbjct: 99 NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAF 158
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG V KV D+F+ NSLI+ Y KC ++ +F ++ V SW+++I A G
Sbjct: 159 HGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCP 218
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+LF EM + +P +V VLSAC + G+ H + RN ++ + +
Sbjct: 219 EEALELFQEMETQNV-KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNA 277
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI------------SGLAMHGQGKEALSI 321
++DMY KCG +E LF M +K ++++ M+ GLAMHG GK+A+++
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIAL 337
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
FS+M + ++P+ V + +L ACSH GLV EG F++M+L Y ++P V+HY C+VD++G
Sbjct: 338 FSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILG 397
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG+L EA+ELI+ MP+ VW +LL A +H N+ + E A L ++ + YVL
Sbjct: 398 RAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVL 457
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA+A +W V+ +R M GL + PG S +EV V++F+ D SHP+ IY
Sbjct: 458 LSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAK 517
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ ++ +L+ GY P+ S +L+ V+E++ +E+ L HS+KLAIAF LI Q PIRI +
Sbjct: 518 LDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVK 577
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDR 588
NLR+C DCH+ KL+S +Y+REI++RDR
Sbjct: 578 NLRVCGDCHSVAKLVSKLYDREILLRDR 605
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/610 (39%), Positives = 363/610 (59%), Gaps = 20/610 (3%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP 63
+ +LH++ L PP + R EQ CL +L+ + A +LK G NP
Sbjct: 22 SPLLHRTGL-----SPPA--DCGARAAEQHCLHLLERSSAPAAVLQSLAFLLKSGLHANP 74
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEP-GAFDFNTLIRGF----VKEVEFEEALFL 118
+ L A+ A + ++ + P AF NTLIR + A F
Sbjct: 75 LVLTRLFASSAAAAPALLEPLVAALLVPSVPIDAFLANTLIRAHAASPLPSARLRAASF- 133
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ M P+ FTFP L KACA + G+Q H K GF D +V N+LI+MY
Sbjct: 134 FPLMLRSATLPNKFTFPFLLKACAAFPGV--GVQAHAAALKFGFTTDQYVSNTLIHMY-S 190
Query: 179 CEKVEF---ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
C EF A +F +M + S +WSA+I + +GL S+ + LF EM RP+E
Sbjct: 191 CFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGV-RPDEVT 249
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
++ VL+A LGAL+L + + + +V + +LID KCG L+ + +F+ M
Sbjct: 250 MIGVLAAAADLGALELARWVGRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMK 309
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
++ ++++ +I LAM G+GKEA+++F EM G+ PDDV ++GVL+ACSHAG+V+EG
Sbjct: 310 ERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYG 369
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+ M++ Y I P ++HYGC+VD+ GRAGM+ A+E + MP++ N ++WR+L++A + H
Sbjct: 370 YFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMKPNPIIWRTLVAACRAH 429
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
LE+GE +NL H ++YV+LSN+YA +RW + ++IR EM+ +G+ + PG SL
Sbjct: 430 GRLELGETITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSL 489
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
VE+ +V++F++ D SHP W IY M+ +M +L+ G+ S+VL D+DE++K L+
Sbjct: 490 VELDGEVHEFIAGDESHPQWKEIYMMVEEMARELRRAGHISATSEVLLDLDEEDKEVALQ 549
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF L+ G+ +R+ +NLR+C+DCH K IS++Y REIIVRDR RFHRFK
Sbjct: 550 WHSEKLAIAFVLLRTPPGTQVRVVKNLRVCSDCHAAIKCISLVYNREIIVRDRSRFHRFK 609
Query: 596 DGTCSCRDYW 605
+G+CSC D+W
Sbjct: 610 NGSCSCNDFW 619
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/599 (39%), Positives = 354/599 (59%), Gaps = 35/599 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK C K E +++H HVLK G + + ++L+A
Sbjct: 109 LLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRD 168
Query: 72 ----TCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFE 124
T + + S Y S + DE D +N LI G+ + ++EAL L+ EM +
Sbjct: 169 VVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMK 228
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V+PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC +VE
Sbjct: 229 TNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
AS +F+ + K V SW+ +I + L+ E L LF EM P E ++S+L AC
Sbjct: 289 ASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ESPNEVTMLSILPACA 347
Query: 245 HLGALDLGKCTHGSLIRNISALN--VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + ++ + TSLIDMY KCG +E +F M ++ ++
Sbjct: 348 HLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A IFS M ++G+EPDD+ +VG+LSACSH+G+++ G F M
Sbjct: 408 NAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y+I P ++HYGC++DL+G +G+ EA E+I SM + + V+W SLL A K+H N+E+GE
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGE 527
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I + YVLLSN+YA A RW +VAK R + KG+ + PG S +E+ V
Sbjct: 528 SFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVV 587
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 588 HEFIIGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 647
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F DG CSC
Sbjct: 648 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 217/420 (51%), Gaps = 37/420 (8%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIF 88
+ L++L CK L+ + +HA ++K G + S L+ LS H+ + YA S+F
Sbjct: 1 RNHPSLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVF 60
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I EP +NT+ RG + AL+LY M G+ P+++TFP L KACAK +A +
Sbjct: 61 DSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFR 120
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
EG QIHGHV K+G + DL+V SLI MY K + E A +F Q + V S++A+I +A
Sbjct: 121 EGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYA 180
Query: 209 SNGL-------------------------------WSECLKLFGEMNNEKCWRPEESILV 237
SNG + E L+LF EM +P+ES +V
Sbjct: 181 SNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNV-KPDESTMV 239
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VLSAC +++LG+ H + + N+ + +LID+Y+KCG +E LF ++ K
Sbjct: 240 TVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK 299
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LL 355
++++ +I G KEAL +F EMLR G P++V + +L AC+H G ++ G +
Sbjct: 300 DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIH 359
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ +L+ P+ ++D+ + G + A ++ SM + ++ W +++ +H
Sbjct: 360 VYIDKRLKGVSNPSSLRTS-LIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMH 417
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/527 (41%), Positives = 327/527 (62%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A IF +++E ++ +I + + +AL L+ M G+ PD T +L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC+ L+ L+ G IH V+K G + D FV +L++MYGKC ++E A +F +M ++ +
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I +A G +E L LF +M E P++ +V+V+ AC LGA+ +
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGV-VPDKVAMVTVVFACAKLGAMHKARTIDDY 358
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ R L+VI+ T++IDM+ KCGC+E +F M +K +++S MI+ HGQG++A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F MLR G+ P+ + V +L ACSHAGLV EGL F M +Y + V+HY CVVD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EAL+LI+SM +++++ +W + L A + H ++ + E AA +L ++ +P
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 538
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y+LLSN+YA A RW DVAK R M+ + L + PG++ +EV K ++F D +HP I
Sbjct: 539 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 598
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YEM+ + +L+ GY PD + VL DVDE+ K L HS+KLAIAF LI + +PIRI
Sbjct: 599 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRI 658
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCHT+ KL+S I R IIVRD RFH FK+G CSC DYW
Sbjct: 659 IKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 169/312 (54%), Gaps = 7/312 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
++ GF K ++ + E+ G PDN+T P + +AC L+ L+ G IH V+K G
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
+ D FV +L++MY KC ++E A +F +M ++ + +W+ +I +A G +E L LF
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M E P++ +V+V+ AC LGA+ + + R L+VI+ T++IDMY KC
Sbjct: 121 KMREEGV-VPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
GC+E +F M +K +++S MI+ HGQG++AL +F ML G+ PD + +L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC--VVDLMGRAGMLGEALELIQSMPIQ 399
ACS + G L + Y+ + H+ C +VD+ G+ + +A L MP +
Sbjct: 240 YACSDLKNLQMGRLIH---HIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP-E 295
Query: 400 QNDVVWRSLLSA 411
++ V W ++
Sbjct: 296 RDLVTWTVMIGG 307
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 213/420 (50%), Gaps = 21/420 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+++ C KNL+ + +H V K+G + F + LV ++ A +F ++ E
Sbjct: 36 VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCR--EIEDARFLFDKMQE 93
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +I G+ + + E+L L+ +M E GV PD + ACAKL A+ + I
Sbjct: 94 RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARII 153
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
++ + F+ D+ + ++I+MY KC VE A IF +M++K+V SWSA+IAA+ +G
Sbjct: 154 DDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQG 213
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L LF M + P++ L S+L AC+ L L +G+ H + + L+ V +
Sbjct: 214 RKALDLFRMMLSSGML-PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAA 272
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+DMY KC +E LF M ++ +T++VMI G A G E+L +F +M EG+ PD
Sbjct: 273 LVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPD 332
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
V V V+ AC+ G +++ D R K + ++ ++D+ + G + A
Sbjct: 333 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGT----AMIDMHAKCGCVESAR 388
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI---NSHHPSDYVLLSNMYA 447
E+ M ++N + W ++++A H A +LF + + P+ L+S +YA
Sbjct: 389 EIFDRME-EKNVISWSAMIAAYGYHGQGR----KALDLFPMMLRSGILPNKITLVSLLYA 443
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 351/603 (58%), Gaps = 35/603 (5%)
Query: 37 ILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C L+ E +++H HVLK G+ + + ++L++
Sbjct: 109 LLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRD 168
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + S Y A +F +I +N +I G+ +EAL L+ EM +
Sbjct: 169 VVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMK 228
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V+PD T + ACA+ +++ G Q+H + G +L + N+LI++Y KC +VE
Sbjct: 229 TNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVET 288
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 289 ACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSG-ENPNDVTMLSILPACA 347
Query: 245 HLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
LGA+D G+ H + + I + + TSLIDMY KCG +E +F M +
Sbjct: 348 QLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSAC 407
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ A IFS M + G+EPDD+ +VG+LSACSH+G+++ G F M
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
Y+I P ++HYGC++DL+G G+ EA E+I +M ++ + V+W SLL A K+H N+E+GE
Sbjct: 468 NYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGE 527
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+ L +I +P YVLLSN+YA A RW +VA IR + KG+ + PG S +E+ V
Sbjct: 528 SFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVV 587
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K+ L+ HS+KLA
Sbjct: 588 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLA 647
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 648 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 707
Query: 603 DYW 605
DYW
Sbjct: 708 DYW 710
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 190/356 (53%), Gaps = 33/356 (9%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIF 88
+ L++L CK L+ + +HA ++K G + S L+ C LS ++ + YA S+F
Sbjct: 1 RNHPSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVF 60
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I EP +NT+ RG + A+ LY M G+ P+++TFP L K+CAKL+ K
Sbjct: 61 ETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSK 120
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK--------------------------- 181
EG QIHGHV K+G+E DL+V SLI+MY K +
Sbjct: 121 EGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYA 180
Query: 182 ----VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+E A +F ++ K V SW+AII+ +A G E L LF EM +P+ES +V
Sbjct: 181 SRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNV-KPDESTMV 239
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+V+SAC G++ LG+ H + + N+ + +LID+Y KCG +E LF+ +++K
Sbjct: 240 TVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK 299
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++++ MI G KEAL +F EMLR G P+DV + +L AC+ G ++ G
Sbjct: 300 DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 152/342 (44%), Gaps = 59/342 (17%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N++ E +T++ C +++ ++VH+ + G SNL AL S
Sbjct: 230 NVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGL------GSNLKIVNALIDLYSKC 283
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ AC +F+ + +NT+I G+ ++EAL L+ EM G P++ T ++
Sbjct: 284 GEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSIL 343
Query: 139 KACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA+L A+ G IH ++ K G ++ SLI+MY KC +E A +F M ++
Sbjct: 344 PACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRT 403
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+++ +A+I A +G + +F M P++ V +LSAC+H G LDLG+
Sbjct: 404 LSACNAMIFGFAMHGRANAAFDIFSRMRKNGI-EPDDITFVGLLSACSHSGMLDLGR--- 459
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAM 311
+FR M ++T Y MI L
Sbjct: 460 --------------------------------RIFRSMTQNYKITPKLEHYGCMIDLLGH 487
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G KEA + + M +EPD V++ +L AC G V G
Sbjct: 488 LGLFKEAEEMINTMT---MEPDGVIWCSLLKACKMHGNVELG 526
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/575 (40%), Positives = 348/575 (60%), Gaps = 9/575 (1%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C +L E +KVHA V+ G + + +++++ +G ++ A +F ++
Sbjct: 130 VLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSM--YFKFGDVEAARVVFDRMLV 187
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT++ GFVK E A ++ +M G D T AL AC + LK G +I
Sbjct: 188 RDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEI 247
Query: 154 HGHVFKVGFE---CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
HG+V + G C+ F+ NS+I+MY CE V A +F+ + K V SW+++I+ +
Sbjct: 248 HGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKC 307
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + L+LFG M P+E ++SVL+AC + AL LG +++ +NV+V
Sbjct: 308 GDAFQALELFGRMVVVGAV-PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVV 366
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+LI MY CG L +F M +K +VM++G +HG+G+EA+SIF EML +G+
Sbjct: 367 GTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGV 426
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD+ ++ VLSACSH+GLV+EG F +M +Y + P HY C+VDL+GRAG L EA
Sbjct: 427 TPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAY 486
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+I++M ++ N+ VW +LLSA ++H N+++ I+A+ LF++N S YV LSN+YA +
Sbjct: 487 AVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAER 546
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
RW DV +R +A + L + P +S VE+ + V++F D SH D+IY + + QLK
Sbjct: 547 RWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLK 606
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL DV+E+ K + L HS++LA+AFALI+ G+ IRI +NLR+C DCHT
Sbjct: 607 KAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHT 666
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K+IS + REII+RD RFH F+DG CSC YW
Sbjct: 667 VIKMISKLTNREIIMRDICRFHHFRDGLCSCGGYW 701
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 196/389 (50%), Gaps = 29/389 (7%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFW-NPFC 65
SLL T PK P +C T+L++ N L + ++HAHV G N +
Sbjct: 2 SLLKTTATLIPK-PSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYL 60
Query: 66 ASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
A+ L A A+ G M YA IF QI +F +N++IRG+ ALFLY +M
Sbjct: 61 ATKLAACYAVC--GHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHF 118
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G +PDNFT+P + KAC L + G ++H V G E D++V NS+++MY K VE A
Sbjct: 119 GQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAA 178
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F +M + + SW+ +++ NG ++FG+M + + + + L+++LSAC
Sbjct: 179 RVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDG-FVGDRTTLLALLSACGD 237
Query: 246 LGALDLGKCTHGSLIRNISA---LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
+ L +GK HG ++RN + N + S+IDMY C + LF + K +++
Sbjct: 238 VMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSW 297
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +ISG G +AL +F M+ G PD+V + VL+AC+ +
Sbjct: 298 NSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISAL------------ 345
Query: 363 EYRIVPTVQHY----GCVVDLMGRAGMLG 387
R+ TVQ Y G VV+++ ++G
Sbjct: 346 --RLGATVQSYVVKRGYVVNVVVGTALIG 372
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/525 (39%), Positives = 321/525 (61%), Gaps = 1/525 (0%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D +F + +NT+I G+ + +E+AL + EM ++PD+FT ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
++ + +G +IHG+V + G + D+++ +SL++MY K ++E + +F ++ + SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
++++A + NG ++E L+LF +M K +P SV+ AC HL L LGK HG ++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKV-KPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
R N+ + ++L+DMY KCG ++ +F M +++++ +I G A+HG G EA+S
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM R+G++P+ V +V VL+ACSH GLV+E F+ M Y + ++HY V DL+
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG L EA I M ++ VW +LLS+ VH NLE+ E A+ +F ++S + YV
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
L+ NMYA RW ++AK+R M KGL + P S +E+ K + FVS DRSHP+ D I E
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ + Q++ EGY D S VL DVDE+ KRE L GHS++LA+AF +I+ G+ IR+ +
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 670
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
N+R+C DCH K IS I EREIIVRD RFH F G CSC DYW
Sbjct: 671 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 39/364 (10%)
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F+ + P + ++IR F + F +AL + EM G PD+ FP++ K+C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKC-------------------------EKV 182
+ G +HG + ++G +CDL+ N+L+NMY K E V
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 183 EFASAI-----------FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+ + I F+ M +K V S++ IIA +A +G++ + L++ EM +P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL-KP 240
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ L SVL + + GK HG +IR +V + +SL+DMY K +E +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ + ++++ +++G +G+ EAL +F +M+ ++P V + V+ AC+H ++
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + L + +VD+ + G + A ++ M + ++V W +++
Sbjct: 361 LGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418
Query: 412 SKVH 415
+H
Sbjct: 419 HALH 422
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++ C +L K++H +VL+ GF N F AS LV S G++ A IF +++
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM--YSKCGNIKAARKIFDRMN 405
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G EA+ L+ EM +GV+P+ F A+ AC+ + + E
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 153 IHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS-WSAIIAA 206
+ KV G +L ++ ++ G+ K+E A +M + S WS ++++
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L K ++++ + Q+H + + +I++Y + + A +FK +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKC 254
V +W ++I L+S+ L F EM + +C P+ ++ SVL +CT + L G+
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC--PDHNVFPSVLKSCTMMMDLRFGES 126
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC------------------------- 289
HG ++R ++ +L++MY K + +
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 290 -----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+F +M K ++Y+ +I+G A G ++AL + EM L+PD
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 339 GVL 341
VL
Sbjct: 247 SVL 249
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/581 (38%), Positives = 337/581 (58%), Gaps = 7/581 (1%)
Query: 29 LKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L L+IL C K LE K +H+H+ + G + + L++ A G + A
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA--RCGDLPKAR 385
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F + + +N +I G+ + + EA+ LY +M GV+P TF L ACA
Sbjct: 386 ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
A +G IH + + G + + + N+L+NMY +C + A +F+ + V SW+++IA
Sbjct: 446 AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
HA +G + KLF EM NE+ P+ SVLS C + AL+LGK HG + +
Sbjct: 506 GHAQHGSYETAYKLFQEMQNEE-LEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQ 564
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
L+V + +LI+MY++CG L+ +F + + ++++ MI G A G+ +A+ +F +M
Sbjct: 565 LDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQM 624
Query: 326 LREGLEP-DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
EG P D + +LSAC+HAGLV EG F M+ EY ++PT++HYGC+V L+GRA
Sbjct: 625 QNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRAR 684
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
EA LI MP + VW +LL A ++H N+ + E AA N ++N+ +P+ Y+LLSN
Sbjct: 685 RFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSN 744
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA A RW DVAKIR M +G+ + PG S +EV +++F++ DRSHP IY + +
Sbjct: 745 VYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKR 804
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ +++ GY PD VL D+ + + L HS++LAIA+ LI G+PIRI +NLR+
Sbjct: 805 LSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRI 864
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCHT +K IS + REII RD RFH FK+G CSC DYW
Sbjct: 865 CGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 195/380 (51%), Gaps = 8/380 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L+ C L E K++HA +++ G + F SNL+ + +D A +F+++
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFL-SNLLINMYVKCRSVLD-AHQVFKEM 88
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N+LI + ++ ++A L+ EM G P+ T+ ++ AC L+ G
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH + K G++ D VQNSL++MYGKC + A +F + + V S++ ++ +A
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
ECL LFG+M++E P++ +++L A T LD GK H + ++ V
Sbjct: 209 YVKECLGLFGQMSSEGI-SPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+ M V+CG ++ F+ +AD+ + Y+ +I+ LA HG EA + M +G+
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+ Y+ +L+ACS + + G L + E VQ ++ + R G L +A E
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHIS-EDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
L +MP +++ + W ++++
Sbjct: 387 LFYTMP-KRDLISWNAIIAG 405
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 183/378 (48%), Gaps = 7/378 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L T L+E K++H ++ G + + LV C G +D A F+ I +
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV--RCGDVDSAKQAFKGIADR 293
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N LI + EA Y M GV + T+ ++ AC+ +AL+ G IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ + G D+ + N+LI+MY +C + A +F M ++ + SW+AIIA +A
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E ++L+ +M +E +P + +LSAC + A GK H ++R+ N + +L
Sbjct: 414 EAMRLYKQMQSEGV-KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
++MY +CG L + +F + ++++ MI+G A HG + A +F EM E LEPD+
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ + VLS C + + G R+ E + V ++++ R G L +A +
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRIT-ESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 395 SMPIQQNDVV-WRSLLSA 411
S+ Q DV+ W +++
Sbjct: 592 SL--QHRDVMSWTAMIGG 607
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 158/299 (52%), Gaps = 4/299 (1%)
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
R E D T+ AL + C + + L E +IH + + G D+F+ N LINMY KC V
Sbjct: 21 RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +FK+M ++ V SW+++I+ +A G + +LF EM N + P + +S+L+AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG-FIPNKITYISILTACY 139
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
L+ GK H +I+ + V+ SL+ MY KCG L + +F ++ + ++Y+
Sbjct: 140 SPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
M+ A KE L +F +M EG+ PD V Y+ +L A + +++EG ++ +E
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEE 258
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH-HNLEIGE 422
+ ++ +V + R G + A + + + ++ VV+ +L++A H HN+E E
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIAALAQHGHNVEAFE 316
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/618 (38%), Positives = 363/618 (58%), Gaps = 50/618 (8%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS--HWGSMDYACSIFRQIDEPG 95
+ TC+ + + ++HA +K G + A+ ++ CA S H +DYA IF Q+ +
Sbjct: 23 INTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 82
Query: 96 AFDFNTLIRGFVKEVEFEE--ALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F +NT+IRGF + E + A+ L+ EM + +EP+ FTFP++ KACAK +++G Q
Sbjct: 83 CFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQ 142
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKC-----------------EKV------------- 182
IHG K GF D FV ++L+ MY C E V
Sbjct: 143 IHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVV 202
Query: 183 ---------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ A +F +M Q+SV SW+ +I+ ++ NG + + +++F EM +
Sbjct: 203 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGE 262
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
RP LVSVL A + LG+L+LG+ H + ++ ++ ++LIDMY KCG +EK
Sbjct: 263 DIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 322
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ +F + + +T+S MI+G A+HGQ +A+ F +M + G+ P DV Y+ +L+ACSHA
Sbjct: 323 IMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHA 382
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV EG F +M + P ++HYGC+VDL+GR G+L EA E I +MPI+ +DV+W++
Sbjct: 383 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKA 442
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A ++H N+E+G+ A L + H YV LSNMYA W +V+++R M +
Sbjct: 443 LLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDI 502
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PG S +++ +++F+ +D SHP I M+ ++ +L+ GY P +QVL +++E
Sbjct: 503 RKDPGCSWIDIDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLLNLEE 562
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
++K L HS+K+A AF LI S G PIRI +NLR+C DCH+ KLIS +Y+R+I VRD
Sbjct: 563 EDKENALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRD 622
Query: 588 RKRFHRFKDGTCSCRDYW 605
RKRFH F+DG+CSC DYW
Sbjct: 623 RKRFHHFQDGSCSCMDYW 640
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 143/343 (41%), Gaps = 60/343 (17%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE----K 181
G P + FP + C ++ L QIH K G D ++ +
Sbjct: 12 GNSPASSLFPQI-NTCRTIRDLS---QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRD 67
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE--CLKLFGEMNNEKCWRPEESILVSV 239
+++A IF QM Q++ SW+ II + + + LF EM +++ P SV
Sbjct: 68 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSV 127
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-------- 291
L AC G + GK HG ++ + V ++L+ MYV CG ++ LF
Sbjct: 128 LKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIERE 187
Query: 292 ---------------------------------RMMADKCQ----LTYSVMISGLAMHGQ 314
RM+ DK + ++++ MISG + +G
Sbjct: 188 MVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGF 247
Query: 315 GKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQH 372
K+A+ +F EM + E + P+ V V VL A S G + G L RI +
Sbjct: 248 FKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLG- 306
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++D+ + G++ +A+ + + +P ++N + W ++++ +H
Sbjct: 307 -SALIDMYSKCGIIEKAIMVFERLP-RENVITWSAMINGFAIH 347
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/572 (39%), Positives = 339/572 (59%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L F +H+ V K GF + F +N+V C S G + A +F +
Sbjct: 110 VLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVV--CFYSKCGFLRDAWKVFDDMVV 167
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +I G ++ +F EA+ L+ + E G+ PD F + +ACA+L L+ G I
Sbjct: 168 KNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWI 227
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
+ + G ++FV SL++MY KC +E A +F M +K + WSA+I +ASNGL
Sbjct: 228 DRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLP 287
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++LF EM RP+ +V LS+C LGAL+LG G + N ++ TS
Sbjct: 288 REAIELFFEMRKVNV-RPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTS 346
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LID Y KCG +E+ L +++MM +K ++ ++ +ISGLAM+GQ A +F +M + G+ P+
Sbjct: 347 LIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPN 406
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ +VG+L C+HAGLV++G F+ M ++ + PT++HYGC+VDL+ RAG L EA LI
Sbjct: 407 EHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLI 466
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ MP++ N +VW SLL ++H ++ E K L ++ + YVLLSN+Y+ ++RW
Sbjct: 467 KGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWD 526
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ KIR+ + KG+ + PG+S VEV V++F+ D SHP IYE + + LK G
Sbjct: 527 EAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAG 586
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y+P VL DV+E+EK L HS+KLA+AFALI IR+ +NLR+C DCH K
Sbjct: 587 YNPTTEFVLFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIK 646
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS + REI++RD RFH F DG CSCRDYW
Sbjct: 647 HISKVTGREIVIRDNNRFHCFSDGACSCRDYW 678
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 170/316 (53%), Gaps = 3/316 (0%)
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +NT+IRG V + F A+ LY M + + PD+FTF + KACA+L G+ IH
Sbjct: 69 TFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHS 128
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
VFK GF+CD+FV+ +++ Y KC + A +F M K+V SW+ +I G + E
Sbjct: 129 LVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFRE 188
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ LF + E RP+ ++V VL AC LG L+ G+ + + NV V TSL+
Sbjct: 189 AVDLFRGL-LESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLV 247
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KCG +E+ +F M +K + +S MI G A +G +EA+ +F EM + + PD
Sbjct: 248 DMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCY 307
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
VG LS+C+ G + G M E + V ++D + G + EAL + +
Sbjct: 308 AMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTS-LIDFYAKCGSMEEALGVYKM 366
Query: 396 MPIQQNDVVWRSLLSA 411
M +++ VV+ +++S
Sbjct: 367 MK-EKDRVVFNAVISG 381
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/580 (37%), Positives = 340/580 (58%), Gaps = 6/580 (1%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TCALSHWGSMDYACS 86
++K E ++ +L ++ HAH++ G + + L+ +CA GS+ Y
Sbjct: 7 KIKSAEYEAVVSAGPHLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAA---GSIAYTRR 63
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+FR + +P +F FN+LI+ K +A+ Y M + P +TF ++ KACA L
Sbjct: 64 LFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSL 123
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L G +H HVF G+ D FVQ +LI Y K A +F +M Q+S+ +W+++I+
Sbjct: 124 LCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISG 183
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NGL +E +++F +M + P+ + VSVLSAC+ LG+LD G H ++ + +
Sbjct: 184 YEQNGLANEAVEVFNKMRESRV-EPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITM 242
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV++ TSL++M+ +CG + + +F M + + ++ MISG MHG G EA+ +F M
Sbjct: 243 NVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMK 302
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ P+ V +V VLSAC+HAGL++EG F MK EY +VP V+H+ C+VD+ GR G+L
Sbjct: 303 ARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLL 362
Query: 387 GEALELIQSMPIQQ-NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
EA + ++ + + VW ++L A K+H N ++G A+NL +P YVLLSNM
Sbjct: 363 NEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNM 422
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA A R V +R M +GL + G+S ++V + Y F D+SHP + IY + ++
Sbjct: 423 YALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPETNEIYCFLDEL 482
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
W+ K GY+P + +++ +E+ L+ HS+KLA+AF L+ G +RI +NLR+C
Sbjct: 483 IWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVTLRIVKNLRIC 542
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH+ K IS + REIIVRD+ RFH F++G+CSC DYW
Sbjct: 543 EDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/609 (38%), Positives = 349/609 (57%), Gaps = 45/609 (7%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++LK C + + K++H VLK G + F + L+ CA ++YA +F
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECA-----CVEYARLVFD 183
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ E ++T+IR + EF+ AL L EM V P ++ A ++
Sbjct: 184 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 243
Query: 150 GMQIHGHVFKVGFECDLFVQNS--LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA-- 205
G +H +V + + V + L++MY KC + A +F + QK+V SW+A+IA
Sbjct: 244 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 303
Query: 206 -----------------------------AHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
A+A + LF +M RP + +
Sbjct: 304 IRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV-RPTKVTI 362
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VS+LS C GALDLGK H + + ++ I+ T+L+DMY KCG + LF
Sbjct: 363 VSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAIS 422
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ ++ +I+G AMHG G+EAL IF+EM R+G++P+D+ ++G+L ACSHAGLV EG
Sbjct: 423 RDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 482
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F++M + +VP ++HYGC+VDL+GRAG+L EA E+I+SMPI+ N +VW +L++A ++H
Sbjct: 483 FEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHK 542
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N ++GE+AA L +I + VL+SN+YA A RW D A +R M + G+ + PG S++
Sbjct: 543 NPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVI 602
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
EV V++F+ D+SHP I EM+ +M +L GY PD S VL ++DE+EK L
Sbjct: 603 EVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTY 662
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF LI + +PIRI +NLR+CNDCH TKL+S IY R IIVRDR RFH F++
Sbjct: 663 HSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFRE 722
Query: 597 GTCSCRDYW 605
G CSC DYW
Sbjct: 723 GYCSCGDYW 731
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 173/346 (50%), Gaps = 27/346 (7%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
LE+ K++HAH++K F ++ + F P A +N +
Sbjct: 55 TLEQTKQIHAHIIKTHFH------------------HALQIPLNDFPSGLSPSA-QWNFV 95
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I + K + AL +Y ++ + E DNF P++ KAC ++ + G +IHG V K G
Sbjct: 96 ITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL 155
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ D+FV N+L+ MYG+C VE+A +F +M ++ V SWS +I + + N + L+L E
Sbjct: 156 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 215
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA--LNVIVETSLIDMYVK 280
MN + RP E +VS+++ + +GK H +IRN + + V T+L+DMY K
Sbjct: 216 MNFMQV-RPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAK 274
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG L LF + K ++++ MI+G + +EA ++F D +++ +
Sbjct: 275 CGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNR----DVMIWTAM 330
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
LSA + A +++ FD+M+ + PT ++ L AG L
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTS-GVRPTKVTIVSLLSLCAVAGAL 375
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 26/295 (8%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P P + L L++ QIH H+ K F L + + +F S +
Sbjct: 38 PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLN-----------DFPSGL 86
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
A W+ +I ++ L ++ ++ + + + SVL AC +
Sbjct: 87 ------SPSAQWNFVITSYTKRNQPRNALNVYAQLRKMD-FEVDNFMAPSVLKACGQVSW 139
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
LGK HG +++ +V V +L+ MY +C C+E +F M ++ +++S MI
Sbjct: 140 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRS 199
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG----LLCFDRMKLEY 364
L+ + + AL + EM + P +V V +++ + + G E+
Sbjct: 200 LSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEH 259
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
VPT ++D+ + G LG A +L + Q+ V W ++++ + LE
Sbjct: 260 MGVPTTT---ALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIRSNRLE 310
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 345/573 (60%), Gaps = 4/573 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQIDE 93
+ ++ C + E ++ A+ +K F + L+ C S SM YA +F + E
Sbjct: 35 ILLISKCNSERELMQIQAYAIKSHQEDVSF-NTKLINFCTESPTESSMSYARHLFDAMSE 93
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P FN++ RG+ + E L+ E+ E + PDN+TFP+L KACA +AL+EG Q+
Sbjct: 94 PDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQL 153
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K+G + +++V +LINMY +CE V+ A +F ++ + V ++A+I +A
Sbjct: 154 HCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRP 213
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+E L LF EM K +P E L+SVLS+C LG+LDLGK H ++ V V T+
Sbjct: 214 NEALSLFREMQG-KNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTA 272
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDM+ KCG L+ + +F M K +S MI A HGQ + ++ +F M E ++PD
Sbjct: 273 LIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPD 332
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++ ++G+L+ACSH GLV EG F M E+ IVP+++HYG +VDL+GRAG L +A E I
Sbjct: 333 EITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFI 392
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+PI ++WR LL+A H+NLE+ E ++ + +++ H DYV+LSN+YAR ++W
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWE 452
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
V +R M + + PG S +EV V++F S D A ++ + +M +LK G
Sbjct: 453 AVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLAG 512
Query: 514 YSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
Y PD S V+ D+ + EK L+ HS+KLAIAF L++ G+ IR+ +NLR+C DCH+
Sbjct: 513 YVPDTSMVVHADMGDQEKEITLRYHSEKLAIAFGLLNTPPGTTIRVVKNLRVCRDCHSAA 572
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS+I+ R++++RD +RFH F+DG CSCRD+W
Sbjct: 573 KLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 348/579 (60%), Gaps = 4/579 (0%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSI 87
+ Q + ++ C +L E ++ A+ +K F A L+ C S SM YA +
Sbjct: 27 VNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHL 85
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + EP FN++ RG+ + E L+ E+ E G+ PDN+TFP+L KACA +AL
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+EG Q+H K+G + +++V +LINMY +CE V+ A +F ++ + V ++A+I +
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGY 205
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A +E L LF EM K +P E L+SVLS+C LG+LDLGK H ++
Sbjct: 206 ARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V T+LIDM+ KCG L+ + +F M K +S MI A HG+ ++++ +F M
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
E ++PD++ ++G+L+ACSH G V EG F +M ++ IVP+++HYG +VDL+ RAG L
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A E I +PI ++WR LL+A H+NL++ E ++ +F+++ H DYV+LSN+YA
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
R ++W V +R M + + PG S +EV V++F S D A ++ + +M
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 508 QLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+LK GY PD S V+ ++++ EK L+ HS+KLAI F L++ G+ IR+ +NLR+C
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH KLIS+I+ R++++RD +RFH F+DG CSC D+W
Sbjct: 565 DCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 346/576 (60%), Gaps = 10/576 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWN---PFCASNLVATCALSHWGSMDYACSIFRQ 90
++ C N+E +++H+ ++ G + C N+ A C++ GSM A IF Q
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD--GSMCAARKIFDQ 334
Query: 91 IDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
I + F + +I G+V++ + EEAL L+ M V P++FTF + KACA L AL+
Sbjct: 335 ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+ H K+GF V NSLI+MY + +++ A F + +K++ S++ +I A+A
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N E L+LF E+ ++ S+LS +G + G+ H +I++ LN
Sbjct: 455 NLNSEEALELFNEIEDQG-MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LI MY +CG +E +F M D+ ++++ +I+G A HG +AL +F +ML EG
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P++V Y+ VLSACSH GLVNEG F M E+ ++P ++HY C+VD++GR+G L EA
Sbjct: 574 VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEA 633
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
++ I SMP + + +VWR+ L A +VH NLE+G+ AAK + + H P+ Y+LLSN+YA
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASI 693
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W +V+ IR M K L + G S VEV KV+KF D SHP IY+ + + ++
Sbjct: 694 SKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKI 753
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY P++ VL DV+E++K + L HS+K+A+AF LI S+ PIR+ +NLR+C DCH
Sbjct: 754 KKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCH 813
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ K IS+ REIIVRD RFH KDG CSC +YW
Sbjct: 814 SAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 171/372 (45%), Gaps = 11/372 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+ V+K G+ + C + + G + A +F ++ E A + +I ++
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
EA+ L+ +M G EPD FT + ACA ++ L G Q+H + G D V
Sbjct: 250 GYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309
Query: 170 NSLINMYGKCE---KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS-ECLKLFGEMNN 225
LINMY KC + A IF Q+ +V SW+A+I + G + E L LF M
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYVKCGCL 284
P S L AC +L AL +G+ ++ S++N V SLI MY + G +
Sbjct: 370 THVI-PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC-VANSLISMYARSGRI 427
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ F ++ +K ++Y+ +I A + +EAL +F+E+ +G+ + +LS
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487
Query: 345 SHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
+ G + +G R +K ++ +V + ++ + R G + A ++ + M +N +
Sbjct: 488 ASIGTIGKGEQIHARVIKSGLKLNQSVCN--ALISMYSRCGNIESAFQVFEDME-DRNVI 544
Query: 404 VWRSLLSASKVH 415
W S+++ H
Sbjct: 545 SWTSIITGFAKH 556
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 94 PGAFDFNTLIRGFVKEVE---FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
P + N L ++E+ +A+ M +G PD T+ K C + ++ G
Sbjct: 26 PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIG 85
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAAHAS 209
+H + + + D NSLI++Y KC + E A++IF+ M + + SWSA+++ A+
Sbjct: 86 TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFAN 145
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNV 268
N + L F +M E + P E + AC+ + +G G +I+ +V
Sbjct: 146 NNMGFRALLTFVDM-IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDV 204
Query: 269 IVETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V LIDM+VK G L +F M ++ +T+++MI+ L G EA+ +F +M+
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIF 264
Query: 328 EGLEPDDVVYVGVLSACSHAGLV 350
G EPD GV+SAC++ L+
Sbjct: 265 SGYEPDRFTLSGVISACANMELL 287
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L C + D+G H L ++ L+ + SLI +Y KCG EK +FR+M
Sbjct: 73 LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRD 132
Query: 300 L-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
L ++S M+S A + G AL F +M+ G P++ + ACS A V+ G F
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192
Query: 359 RMKLEYRIVPTVQHYGC-VVDLMGRA-GMLGEALELIQSMPIQQNDVVWRSLLS 410
+ ++ + + GC ++D+ + G L A ++ + MP ++N V W +++
Sbjct: 193 FV-IKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/515 (40%), Positives = 322/515 (62%), Gaps = 32/515 (6%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M +GV+P+ FT + KACA + +L++G Q H ++ K+GFE D+ VQ +L++MY +C
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 182 VEFASAIFKQMDQKS-------------------------------VASWSAIIAAHASN 210
+E A +F +M ++S V SW+A+IA +A N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G E L +F +M + + + I+ SVLSAC L AL+LG+ H ++++ AL+++V
Sbjct: 121 GYGDESLNVFNQMR-KTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
++L+DMY K G +E +F M + +++++ +I+G A HG+G +A+ +F +ML+ G+
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+P+++ +VGVLSACSH GLVNEG F+ M Y IVP V HY C++DL+GRAG L EA
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
I MP++ + VW +LL A ++H N E+ + A++L + YVLLSN+YA A
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W D AK+R M +G+ + PG+S +EV ++ FV+ + SHP I+E + + ++K
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMK 419
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY P+ + VL+DV++DEK L HS+KLAIAF +I+ + G+ IR+A+NLR+C DCHT
Sbjct: 420 AAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHT 479
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS+ + R+I+VRD RFH FKDG CSC DYW
Sbjct: 480 VIKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 163/336 (48%), Gaps = 49/336 (14%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSIF 88
T++K C + LE+ K+ H +++K GF S++V AL H GS++ A +F
Sbjct: 15 TVVKACASIASLEQGKQAHNYIIKMGF------ESDVVVQTALVHMYARCGSLEDAGHVF 68
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER----------------------- 125
++ E +N +I G + + ++AL L+ EM ER
Sbjct: 69 DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128
Query: 126 --------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
G++ D F ++ ACA L AL+ G Q H +V + GF D+ V ++L++MY
Sbjct: 129 VFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYA 188
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
K +E A +F +M Q++ SW++II A +G ++ + LF +M + +P E V
Sbjct: 189 KSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQM-LQAGIKPNEISFV 247
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VLSAC+H G ++ G+ + +N + +V T +ID+ + GCL++ M
Sbjct: 248 GVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV 307
Query: 297 KCQLT-YSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ ++ + ++ +HG + A I +L G+E
Sbjct: 308 EPDVSVWGALLGACRIHGNTELAKRIAEHLL--GME 341
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/654 (35%), Positives = 362/654 (55%), Gaps = 76/654 (11%)
Query: 20 PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P+ P L L L + +L +++ K VH+ V F NP L+ A + G
Sbjct: 28 PQNPVLVLELLGK----VLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMR--AYAARG 81
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
A ++F I E +N +IR ++ +++AL ++ +M G PD++T+P + K
Sbjct: 82 EPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLK 141
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
AC+ L+ G+Q+HG VFKVG + +LFV N LI +YGKC + A + +M K V S
Sbjct: 142 ACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVS 201
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA----------- 248
W++++A +A N + + L + EM+ + +P+ + S+L A T+ +
Sbjct: 202 WNSMVAGYAQNMQFDDALDICREMDGVR-QKPDACTMASLLPAVTNTSSENVLYVEEMFM 260
Query: 249 ------------------------------LDLGKC-------THGSLIR---NISAL-- 266
L +GKC T S++R ++SAL
Sbjct: 261 NLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLL 320
Query: 267 ---------------NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
N+++E SLIDMY +CGCLE +F M + +++ +IS M
Sbjct: 321 GRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGM 380
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
GQG A+++F+EM G PD + +V +LSACSH+GL+NEG F +M +Y+I P ++
Sbjct: 381 TGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIE 440
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
H+ C+VDL+GR+G + EA +I+ MP++ N+ VW +LLS+ +V+ N++IG +AA L Q+
Sbjct: 441 HFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQL 500
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
YVLLSN+YA+A RW +V IR+ M + + + PG S VE+ +V+ F++ D
Sbjct: 501 APEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTY 560
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
HP IYE + + ++K GY P L DV+E++K L HS+KLAI FA+++ +
Sbjct: 561 HPQSKEIYEELSVLVGKMKELGYVPKTDSALHDVEEEDKECHLAVHSEKLAIVFAILN-T 619
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
Q SPIRI +NLR+C DCH KLIS I +REI++RD RFH FKDG CSC DYW
Sbjct: 620 QESPIRITKNLRVCGDCHIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 19 PPKGPELNLRLKEQE-------CLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASN 68
P K +L L++ + E C ++L+ C +L +++H +V + N ++
Sbjct: 283 PGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENS 342
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
L+ A G ++ A +F ++ + +LI + + A+ L+ EM G
Sbjct: 343 LIDMYA--RCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQS 400
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN--SLINMYGKCEKVEFAS 186
PD+ F A+ AC+ L EG + + ++ +++ L+++ G+ +V+ A
Sbjct: 401 PDSIAFVAILSACSHSGLLNEG-KFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAY 459
Query: 187 AIFKQMDQK-SVASWSAIIAA 206
I KQM K + W A++++
Sbjct: 460 NIIKQMPMKPNERVWGALLSS 480
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/588 (39%), Positives = 338/588 (57%), Gaps = 12/588 (2%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSH 77
++ L+ + L+IL C E K VHA + G + A++L+ TC
Sbjct: 252 QVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC---- 307
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
GS++ A +F + + +I G+ + E+A L+ M E G++PD T+ +
Sbjct: 308 -GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHI 366
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA L +IH V GF DL V +L++MY KC ++ A +F M ++ V
Sbjct: 367 MNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDV 426
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SWSA+I A+ NG +E + F M P+ +++L+AC HLGALD+G +
Sbjct: 427 VSWSAMIGAYVENGYGTEAFETFHLMKRSNI-EPDGVTYINLLNACGHLGALDVGMEIYT 485
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
I+ +V + +LI M K G +E+ +F M + +T++ MI G ++HG +E
Sbjct: 486 QAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNARE 545
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +F ML+E P+ V +VGVLSACS AG V+EG F + IVPTV+ YGC+V
Sbjct: 546 ALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMV 605
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L EA LI+SMP++ +W SLL A ++H NL++ E AA+ I+ + +
Sbjct: 606 DLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGA 665
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YV LS+MYA A W +VAK+R M S+G+ + G + +EVA KV+ FV +DRSHP
Sbjct: 666 VYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGE 725
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ +K EGY P VL DV E +K E + HS+KLAIA+ ++ L G+PIR
Sbjct: 726 IYAELARLMNAIKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIR 785
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C+DCH+ +K IS + REII RD RFH FKDG CSC DYW
Sbjct: 786 IYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCSCGDYW 833
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 187/386 (48%), Gaps = 8/386 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L++L C + L K+VHA V+ GF + + LV+ GSMD A +F +
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKG--GSMDDARQVFDGL 219
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
FN ++ G+ K ++E+A L+ M + G++P+ +F ++ C +AL G
Sbjct: 220 HIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGK 279
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H G D+ V SLI MY C +E A +F M + V SW+ +I +A NG
Sbjct: 280 AVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ LF M E +P+ + +++AC L+ + H + +++V
Sbjct: 340 NIEDAFGLFATMQEEGI-QPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVS 398
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+ MY KCG ++ +F M + +++S MI +G G EA F M R +E
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V Y+ +L+AC H G ++ G+ + + ++ +V V ++ + + G + A
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQ-AIKADLVSHVPLGNALIIMNAKHGSVERARY 517
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHN 417
+ +M ++++ + W +++ +H N
Sbjct: 518 IFDTM-VRRDVITWNAMIGGYSLHGN 542
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 194/390 (49%), Gaps = 16/390 (4%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+ + + + + C L + K+V H+++ G N + + L+ ++ G++ A
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSIC--GNVTEAR 112
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
IF ++ +N LI G+ + +EA L+ +M + G+EP TF ++ AC+
Sbjct: 113 QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPA 172
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
L G ++H V GF D + +L++MY K ++ A +F + + V++++ ++
Sbjct: 173 GLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVG 232
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+A +G W + +LF M + +P + +S+L C AL GK H +
Sbjct: 233 GYAKSGDWEKAFELFYRM-QQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLV 291
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
++ V TSLI MY CG +E +F M + ++++VMI G A +G ++A +F+ M
Sbjct: 292 DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATM 351
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY----RIVPTVQHYGCVVDLMG 381
EG++PD + Y+ +++AC+ + +N ++ + +V T +V +
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVST-----ALVHMYA 406
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G + +A ++ +MP +++ V W +++ A
Sbjct: 407 KCGAIKDARQVFDAMP-RRDVVSWSAMIGA 435
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 47/351 (13%)
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
F + V + L + E G D+ T+ LF+ C +L+ G Q+ H+ + G + +
Sbjct: 35 FTRRVGANDVL---QRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLN 91
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
++ N+LI +Y C V A IF ++ K+V +W+A+IA +A G E LF +M +
Sbjct: 92 IYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVD 151
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E P +SVL AC+ L+ GK H ++ + + T+L+ MYVK G ++
Sbjct: 152 EGL-EPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMD 210
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC- 344
+F + + T++VM+ G A G ++A +F M + GL+P+ + ++ +L C
Sbjct: 211 DARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCW 270
Query: 345 ----------SHAGLVNEGLL------------------------CFDRMKLEYRIVPTV 370
HA +N GL+ FD MK V V
Sbjct: 271 TPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMK-----VRDV 325
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMP---IQQNDVVWRSLLSASKVHHNL 418
+ +++ G + +A L +M IQ + + + +++A + NL
Sbjct: 326 VSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANL 376
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/576 (39%), Positives = 351/576 (60%), Gaps = 7/576 (1%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C +F + +H++ +K G F ++ L+ A +GS+ +F ++
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA--EFGSLKDCQKVFDRM 308
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N++I+ + + A+ L+ EM ++PD T +L ++L ++
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACR 368
Query: 152 QIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+ G + G F D+ + N+++ MY K V+ A A+F + K V SW+ II+ +A N
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQN 428
Query: 211 GLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G SE ++++ M E + VSVL AC+ GAL G HG L++N L+V
Sbjct: 429 GFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 488
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V TSL DMY KCG L+ L LF + + ++ +I+ HG G++A+ +F EML EG
Sbjct: 489 VGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 548
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++PD + +V +LSACSH+GLV+EG CF+ M+ +Y I P+++HYGC+VDL GRAG L A
Sbjct: 549 VKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIA 608
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L I+SMP+Q + +W +LLSA +VH N+++G+IA+++LF++ H +VLLSNMYA A
Sbjct: 609 LNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 668
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W V +IR+ + KGL ++PG+S +EV KV F + +++HP ++ +Y + + +L
Sbjct: 669 GKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKL 728
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY PD VL+DV++DEK L HS++LA+AFALI + IRI +NLR+C DCH
Sbjct: 729 KMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCH 788
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ TK IS I EREIIVRD RFH FK+G CSC DYW
Sbjct: 789 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 208/418 (49%), Gaps = 24/418 (5%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++LK C+N+ + K+H LK+GF W+ + A++L+ +G++ A +F ++
Sbjct: 158 SVLKACRNVTDGNKIHCLALKFGFMWDVYVAASLIHL--YCRYGAVVNARILFDEMPTRD 215
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+N +I G+ + +EAL L + + R + D+ T +L AC + G+ IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSDGL--RAM--DSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ K G E +LFV N LI++Y + ++ +F +M + + SW++II A+ N
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSL 274
+ LF EM + +P+ L+S+ S + LG + + G +R L ++ + ++
Sbjct: 332 AILLFQEMRLSRI-QPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEP 332
+ MY K G ++ +F + +K ++++ +ISG A +G EA+ +++ M EG +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISA 450
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV-----DLMGRAGMLG 387
+ +V VL ACS AG + +G MKL R++ + V D+ G+ G L
Sbjct: 451 NQGTWVSVLPACSQAGALRQG------MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLD 504
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ--INSHHPSDYVLLS 443
+AL L +P + N V W +L++ H + E + K + + H + LLS
Sbjct: 505 DALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 561
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 179/382 (46%), Gaps = 22/382 (5%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEP 94
T+ + C NL+ K +HA ++ N ++ LV C L G++ A F I
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYL---GNVALARYTFDHIHNR 115
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNE-MFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +N +I G+ + E + ++ M G++PD TFP++ KAC + + +G +I
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKI 172
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K GF D++V SLI++Y + V A +F +M + + SW+A+I+ + +G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNA 232
Query: 214 SECLKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L L + R +S+ +VS+LSACT G + G H I++ + V
Sbjct: 233 KEALTLSDGL------RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LID+Y + G L+ +F M + ++++ +I ++ Q A+ +F EM ++P
Sbjct: 287 KLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQP 346
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR---IVPTVQHYGCVVDLMGRAGMLGEA 389
D + + + S S G + C R + + VV + + G++ A
Sbjct: 347 DCLTLISLASILSQLGEIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
+ +P ++ + W +++S
Sbjct: 404 RAVFNWLP-NKDVISWNTIISG 424
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 144/333 (43%), Gaps = 16/333 (4%)
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEV-EFEEALFLYNEMFERGVEPDNFT-FPALFKACAK 143
S+FRQ+ F +++ V EF + + ++ G E LF+ C
Sbjct: 7 SLFRQVPTCKGGRFTRVLQSVGAVVREFSASANALQDCWKNGNESKEIDDVHTLFRYCTN 66
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
LQ+ K +H + ++ + L+N+Y V A F + + V +W+ +
Sbjct: 67 LQSAK---CLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLM 123
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I+ + G SE ++ F +P+ SVL AC ++ G H ++
Sbjct: 124 ISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFG 180
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+V V SLI +Y + G + LF M + +++ MISG G KEAL+
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALT--- 237
Query: 324 EMLREGLEP-DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
L +GL D V V +LSAC+ AG N G + +++ + + ++DL
Sbjct: 238 --LSDGLRAMDSVTVVSLLSACTEAGDFNRG-VTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G L + ++ M + ++ + W S++ A +++
Sbjct: 295 FGSLKDCQKVFDRMYV-RDLISWNSIIKAYELN 326
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/574 (39%), Positives = 350/574 (60%), Gaps = 8/574 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L C L K + H VLK GF + F + L+ + GS AC +F +
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQF--YHNCGSFGCACDVFDESTV 174
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N +I + + E+A L +EM + + PD T +L ACA+L L+ G
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF 234
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + ++G + +L V N++++MY KC+ +E A +F ++ +K V SW+++++ A +G
Sbjct: 235 LHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGY 294
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ E L LF +M K +E LV VLSAC GALD GK H + + ++++ET
Sbjct: 295 FQEALALFQKMQLNKI-ELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 353
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG ++ L +FR M + T++ +I GLAMHG G++A+S+F +M + L P
Sbjct: 354 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMP 413
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
DDV ++ +L ACSHAGLV+EGL F MK +++I P ++HYGCVVDL+ RA + +AL
Sbjct: 414 DDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAF 473
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I++MPI+ N V+W +LL A + + ++ E + + ++ YV+LSN+YA +W
Sbjct: 474 IENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQW 533
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
K+R +M +KG+ ++PG S +E+ +++FV+ DRSH + IY MI +M ++ +
Sbjct: 534 DHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLD 593
Query: 513 -GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ P + VL D++E+EK L HS+KLAIA LI GSPIRI +NLR+CNDCH++
Sbjct: 594 GGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSF 653
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K+ S +Y REI+ RDR RFH FK+G+CSC D+W
Sbjct: 654 LKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 209/382 (54%), Gaps = 9/382 (2%)
Query: 38 LKT-CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
LKT C ++ + K+ HA +L+ NP +S L++ ALSH G ++YA +F Q+ P
Sbjct: 17 LKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDP 76
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F NT+IRG+ + EA+ LY M ERGV DN+T+P + ACA+L A+K G + H
Sbjct: 77 FICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCE 136
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K GF DLFV N+LI Y C A +F + + V +W+ +I AH + GL +
Sbjct: 137 VLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKA 196
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L EM RP+E +VS++ AC LG L+ GK H N+ V +++D
Sbjct: 197 FDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILD 256
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KC +E +F + +K L+++ M+SGLA G +EAL++F +M +E D++
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316
Query: 337 YVGVLSACSHAGLVNEGL---LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
VGVLSAC+ G +++G L D+ ++ +V +VD+ + G + AL++
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET----ALVDMYAKCGSIDLALQVF 372
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
+ M + +N W +L+ +H
Sbjct: 373 RRMRV-RNVFTWNALIGGLAMH 393
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/573 (40%), Positives = 347/573 (60%), Gaps = 7/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L++C K L K++HA G +N A+ LV A+S+ S+ A ++F +I
Sbjct: 52 SLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSN--SLLNARNLFDKIP 109
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ F +N LIRG+ + A+ LY++M + G+ PDNFT P + KAC+ L A+ EG
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH +V K G+E DLFV +LI+MY KC V A +F ++ + W++++AA+A NG
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E + L EM RP E+ LV+V+S+ + L G+ HG R+ N V+T
Sbjct: 230 PDESISLCREMAANGV-RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT 288
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LIDMY KCG ++ L LF + +K ++++ +I+G AMHG AL +F +M +E P
Sbjct: 289 ALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RP 347
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +VGVL+ACS L++EG ++ M +Y I PTVQHY C++DL+G G L EA +L
Sbjct: 348 DHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDL 407
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I++M ++ + VW +LL++ K+H N+E+ E+A + L ++ +YV+L+NMYA++ +W
Sbjct: 408 IRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKW 467
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
V K+R M K + ++ S +EV KVY F++ D SH D IY + ++E +
Sbjct: 468 EGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEA 527
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+PD V DV+EDEK + HS++LAIAF LI S G+ + I +NLR+C DCH
Sbjct: 528 GYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICEDCHVAI 587
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I EREI VRD R+H FK G CSC D+W
Sbjct: 588 KFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 144/304 (47%), Gaps = 26/304 (8%)
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
++ + +L ++C +AL G Q+H + +G + + L+++Y + A +F
Sbjct: 47 HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD 106
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
++ ++++ W+ +I +A NG + L+ +M + RP+ L VL AC+ L A+
Sbjct: 107 KIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGL-RPDNFTLPFVLKACSALSAIG 165
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
G+ H +I++ ++ V +LIDMY KCGC+ +F + + + ++ M++ A
Sbjct: 166 EGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYA 225
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGLLCFDR 359
+G E++S+ EM G+ P + V V+S+ + H G D+
Sbjct: 226 QNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDK 285
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+K ++D+ + G + AL L + + ++ V W ++++ + H L
Sbjct: 286 VKT------------ALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGYAM-HGLA 331
Query: 420 IGEI 423
+G +
Sbjct: 332 VGAL 335
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/637 (35%), Positives = 368/637 (57%), Gaps = 38/637 (5%)
Query: 4 TSVLHQSLLLTQPEEPP-----KGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWG 58
++ SL + P P P+ L +++ +++L+ +++ + +HA +++ G
Sbjct: 17 STTFAASLPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNG 76
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
+PF L+ +C+ H ++DYA IF+ P + + LI GFV + EA+ L
Sbjct: 77 HSQDPFMVFELLRSCSKCH--AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQL 134
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
Y+ M + PDN+ ++ KAC AL+EG ++H K+GF + V+ ++ +YGK
Sbjct: 135 YSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGK 194
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK--CW------- 229
C ++ A +F++M + VAS + +I++++ GL E +F + + CW
Sbjct: 195 CGELGDARRVFEEMPEDVVAS-TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGF 253
Query: 230 ---------------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
RP E +V VLSAC+ LGAL++G+ H + + LN+
Sbjct: 254 VRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNL 313
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +LI+MY +CG +++ +F M D+ +TY+ MISGL+M+G+ ++A+ +F M+
Sbjct: 314 FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGR 373
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
L P +V +VGVL+ACSH GLV+ G F M +YR+ P ++HYGC+VDL+GR G L E
Sbjct: 374 RLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEE 433
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A +LI++M + + ++ +LLSA K+H NLE+GE AK L YVLLS++YA
Sbjct: 434 AYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYAS 493
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
+ +W + A++R +M G+ + PG S +EV ++++F+ D HP + IYE + ++
Sbjct: 494 SGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRL 553
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
L+ EGY P+ VL+D+++ EK L HS++LAI + LI + IR+ +NLR+C DC
Sbjct: 554 LRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDC 613
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H+ KLI+ I R+I+VRDR RFH F++G CSC DYW
Sbjct: 614 HSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 344/578 (59%), Gaps = 8/578 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++L+ C ++ + K+HAH+L G+ NP + L+ CA+S GS+ YA +F +I P
Sbjct: 27 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 86
Query: 95 GAFDFNTLIRGFVKEVEFEE--ALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGM 151
+N++IRGF + + A+ YN M PD +TF L KAC + + +
Sbjct: 87 QTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCR 146
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++HG + + G++ D+ + +LI Y +E A +F++M + + SW+++I+ + G
Sbjct: 147 EVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTG 206
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L E LK++ +M + LVS+LS+C H+GAL +G H N+ V
Sbjct: 207 LHEEALKMYDQMRISNVGF-DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVG 265
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LIDMY KCG L L +F M + T++ MI G +HG+G EA++ F ML G+
Sbjct: 266 NALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVR 325
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + ++G+L CSH GLV EG+ F M E+ + P ++HYGC+VDL GRAG L EALE
Sbjct: 326 PNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALE 385
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I+S P Q + V+WR+LL + K+H N+EIGE+A +NL Q+ S D VLLS +YA A+
Sbjct: 386 VIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKD 445
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
VA++R + S+G+ +PG+S +EV +V++FV D+SHP IY + ++ +
Sbjct: 446 LQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASL 505
Query: 512 EGYSPDISQVLRDVDEDEK----RERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
GY+ + S ++ + + + HS+KLAIA+ L +G+ + I +NLR+C D
Sbjct: 506 VGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRD 565
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH +TK +S+ ++REIIVRDR RFH FK G CSC+++W
Sbjct: 566 CHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 603
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/590 (37%), Positives = 348/590 (58%), Gaps = 36/590 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H ++K+GF F S+LV A G + A +F ++ E +NT+I G +
Sbjct: 158 RQIHGQIVKFGFGAYVFVGSSLVDMYA--KMGLVSVASQVFDEVQERNVVMYNTMITGLL 215
Query: 108 KEVEFE-------------------------------EALFLYNEMFERGVEPDNFTFPA 136
+ + EA+ L+ +M + G+ D +TF +
Sbjct: 216 RSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGS 275
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ AC L+ALKEG +IH + + G+ ++FV ++L++MY KC V +A A+FK+M K+
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKN 335
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+A++ + NG E +++F +M P++ L SV+S+C +L +L+ G H
Sbjct: 336 VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGI-EPDDFTLGSVISSCANLASLEEGAQFH 394
Query: 257 -GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+L+ + + + V +LI +Y KCG +E LF M+ + +++++ ++SG A G+
Sbjct: 395 CQALVSGLISF-ITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKA 453
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
E + +F ML +GL+PD V ++ VLSACS AGLV G F+ M ++ I+P HY C
Sbjct: 454 NETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTC 513
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++DL GRAG L EA I MP + + W +LLS+ +++ N EIG+ AA++L +++ +
Sbjct: 514 MIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQN 573
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
P+ Y+LLS++YA +W +VA++R M KG + PGFS ++ KVY F + D+S P
Sbjct: 574 PAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFS 633
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
D IY + ++ ++ EGY PD S VL DV++ EK + L HS+KLAIAF L+ + G P
Sbjct: 634 DQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHGLP 693
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH TK IS I +REI+VRD RFH FKDGTCSC D+W
Sbjct: 694 IRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 200/435 (45%), Gaps = 72/435 (16%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+N + KK+H ++K NP F +NL+ A S G++ YA +F ++ +P +F +
Sbjct: 19 RNQTQAKKLHCLIIK--SLTNPETFLYNNLIN--AYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 100 NT-------------------------------LIRGFVKEVEFEEALFLYNEMFERGV- 127
NT LI G+V EA+ YN M + GV
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+ TF + + + G QIHG + K GF +FV +SL++MY K V AS
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 188 IFKQMDQKSVA-------------------------------SWSAIIAAHASNGLWSEC 216
+F ++ +++V SW+ +I NGL +E
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ LF +M E ++ SVL+AC L AL GK H +IR+ NV V ++L+D
Sbjct: 255 MDLFRDMRQEGM-AMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVD 313
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KC + +F+ MA+K ++++ M+ G +G +EA+ +F +M R G+EPDD
Sbjct: 314 MYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFT 373
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V+S+C++ + EG F L ++ + ++ L G+ G + ++ +L M
Sbjct: 374 LGSVISSCANLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432
Query: 397 PIQQNDVVWRSLLSA 411
+++V W +L+S
Sbjct: 433 SF-RDEVSWTALVSG 446
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 138/255 (54%), Gaps = 7/255 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C + L+E K++H +++ G+ N F S LV S+ YA ++F+++
Sbjct: 275 SVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCR--SVRYAEAVFKRMA 332
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ ++ G+ + EEA+ ++ +M G+EPD+FT ++ +CA L +L+EG Q
Sbjct: 333 NKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQ 392
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V N+LI +YGKC +E ++ +F +M + SW+A+++ +A G
Sbjct: 393 FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGK 452
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
+E + LF M + +P+ ++VLSAC+ G ++ G+ S++++ +
Sbjct: 453 ANETIDLFERMLVQGL-KPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHY 511
Query: 272 TSLIDMYVKCGCLEK 286
T +ID++ + G LE+
Sbjct: 512 TCMIDLFGRAGRLEE 526
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 62/277 (22%)
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
K C + + + ++H + K + F+ N+LIN Y K + +A +F +M Q +
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 199 SWSAIIAAHASNGLWS-------------------------------ECLKLFGEMNNEK 227
SW+ +++A++ +G S E +K + M +
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK------- 280
++L + G +DLG+ HG +++ V V +SL+DMY K
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 281 -------------------CGCLEKGLC-----LFRMMADKCQLTYSVMISGLAMHGQGK 316
G L G+ LF M ++ ++++ MI+GL +G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
EA+ +F +M +EG+ D + VL+AC + EG
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEG 289
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/457 (46%), Positives = 300/457 (65%), Gaps = 2/457 (0%)
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IH V + GF ++VQNSL+++Y C V A +F +M +K + +W+++I A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG E L L+ EMN+ K +P+ +VS+LSAC +GAL LGK H +I+ N+
Sbjct: 67 NGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-LRE 328
L+D+Y +CG +E+ LF M DK ++++ +I GLA++G GKEA+ +F M E
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
GL P ++ +VG+L ACSH G+V EG F RM+ EY+I P ++H+GC+VDL+ RAG + +
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A E I+SMP+Q N V+WR+LL A VH + ++ E A + Q+ +H DYVLLSNMYA
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 305
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
QRW DV KIR +M G+ + PG SLVEV +V++F+ D+SHP D IY + +M +
Sbjct: 306 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 365
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
L+ EGY P IS V DV+E+EK + HS+K+AIAF LI + SPI + +NLR+C DC
Sbjct: 366 LRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADC 425
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H KL+S +Y REI+VRDR RFH FK+G+CSC+DYW
Sbjct: 426 HLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ + LG+ H +IR+ + V+ SL+ +Y CG + +F M +K + ++ +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
I+G A +G+ +EAL++++EM +G++PD V +LSAC+ G + G M ++
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ + ++DL R G + EA L M + +N V W SL+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 20/189 (10%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIF 88
+++L C + K+VH +++K G N ++ +L A C G ++ A ++F
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC-----GRVEEAKTLF 147
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEA--LFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
++ + + + +LI G +EA LF Y E E G+ P TF + AC+
Sbjct: 148 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE-GLLPCEITFVGILYACSHCGM 206
Query: 147 LKEGMQIHGHV---FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSA 202
+KEG + + +K+ + F ++++ + +V+ A K M Q +V W
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRT 264
Query: 203 IIAAHASNG 211
++ A +G
Sbjct: 265 LLGACTVHG 273
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/627 (37%), Positives = 340/627 (54%), Gaps = 39/627 (6%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT 72
L QP P P + L L L+ +VHAH+L G S +VA
Sbjct: 58 LLQPLSAPGPPPI---LSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114
Query: 73 CALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNF 132
A S G +D + S+F I EP + FN++IR + + E + Y M G D F
Sbjct: 115 YASS--GDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYF 172
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV---------- 182
TFP + K+ +L ++ G +HG + ++G + DL+V SLI +YGKC ++
Sbjct: 173 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 232
Query: 183 ---------------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
+ A AIF++M +++ SW+ +I+ ++ +GL + L LF
Sbjct: 233 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 292
Query: 222 EMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
EM E RP ++SVL AC L L+ G+ H R N V +L MY K
Sbjct: 293 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 352
Query: 281 CGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
CG L F + +K + ++ MI+ A +G G +A+S F EM++ G++PDD+ +
Sbjct: 353 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 412
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
G+LS CSH+GLV+ GL F+ M Y I P V+HY CV DL+GRAG L EA +L+ MP+
Sbjct: 413 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 472
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+W SLL+A + H NLE+ E AA+ LF + + +YVLLSNMYA A RW +V K+
Sbjct: 473 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 532
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R + S+G +SPG S +E+ K + F+ D SHP IY + + ++K GY PD
Sbjct: 533 RAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDT 592
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
S VL D+ E+EK L HS+KLA+AF +++ + +R+ +NLR+C DCHT IS I
Sbjct: 593 SYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEI 652
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
Y RE+IVRD RFH FK G CSC DYW
Sbjct: 653 YGREVIVRDINRFHHFKGGCCSCGDYW 679
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 342/575 (59%), Gaps = 8/575 (1%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L C N L K++H+ V K GF + + L++ S GS+ A +F ++
Sbjct: 332 VILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM--YSRCGSIKDARLVFDKM 389
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +I G K EAL +Y EM + GVEP+ T+ ++ AC+ AL+ G
Sbjct: 390 VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGR 449
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH V + G D V N+L+NMY C V+ A +F +M Q+ + +++A+I +A++
Sbjct: 450 RIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHN 509
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIV 270
L E LKLF + E +P++ +++L+AC + G+L+ + H +L+R + V
Sbjct: 510 LGKEALKLFDRLQEEGL-KPDKVTYINMLNACANSGSLEWAREIH-TLVRKGGFFSDTSV 567
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+ Y KCG +F M + ++++ +I G A HG+G++AL +F M EG+
Sbjct: 568 GNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGV 627
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD V +V +LSACSHAGL+ EG F M ++ I+PT++HYGC+VDL+GRAG L EA
Sbjct: 628 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAE 687
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
LI++MP Q N +W +LL A ++H N+ + E AA++ +++ + YV LS+MYA A
Sbjct: 688 ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAG 747
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W AK+R M +G+ + PG S ++V K++ FV++DRSHP + IY + ++ +K
Sbjct: 748 MWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMK 807
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
+GY PD V+ DVDE EK + HS++LAIA+ LI G+ I I +NLR+C DCHT
Sbjct: 808 MKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHT 867
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I +REII RD RFH FKDG CSC DYW
Sbjct: 868 ATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 3/321 (0%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ L + L+ K VH+ +L G + + LV A GS +
Sbjct: 227 RITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKC--GSYKDCRQV 284
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F ++ +NT+I G + +EEA +YN+M GV P+ T+ L AC AL
Sbjct: 285 FEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAAL 344
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G +IH V K GF D+ VQN+LI+MY +C ++ A +F +M +K V SW+A+I
Sbjct: 345 HWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGL 404
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A +G +E L ++ EM P S+L+AC+ AL+ G+ H ++ A +
Sbjct: 405 AKSGFGAEALTVYQEMQQAGV-EPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +L++MY CG ++ +F M + + Y+ MI G A H GKEAL +F +
Sbjct: 464 AHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 523
Query: 328 EGLEPDDVVYVGVLSACSHAG 348
EGL+PD V Y+ +L+AC+++G
Sbjct: 524 EGLKPDKVTYINMLNACANSG 544
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 205/440 (46%), Gaps = 57/440 (12%)
Query: 28 RLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSM 81
++ + + +LK C K+L ++VH H+++ + + + N+ C GS+
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQC-----GSI 74
Query: 82 DYACSIFRQID--EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ A +++++ E +N ++ G+++ E+AL L +M + G+ PD T +
Sbjct: 75 EEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLS 134
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
+C AL+ G +IH + G D+ V N ++NMY KC +E A +F +M++KSV S
Sbjct: 135 SCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVS 194
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+ I +A G ++F +M E P +SVL+A + AL GK H +
Sbjct: 195 WTITIGGYADCGRSETAFEIFQKMEQEGV-VPNRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+ + V T+L+ MY KCG + +F + ++ + ++ MI GLA G +EA
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 320 SIFSEMLREGLEPDDVVYVGVLSAC----------------------------------- 344
++++M REG+ P+ + YV +L+AC
Sbjct: 314 EVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMY 373
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP---IQQN 401
S G + + L FD+M + V + ++ + ++G EAL + Q M ++ N
Sbjct: 374 SRCGSIKDARLVFDKM-----VRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPN 428
Query: 402 DVVWRSLLSASKVHHNLEIG 421
V + S+L+A LE G
Sbjct: 429 RVTYTSILNACSSPAALEWG 448
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 136/253 (53%), Gaps = 3/253 (1%)
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+E + A+ + + ++G + ++ + + K C +++ L G Q+H H+ + D +
Sbjct: 2 IEKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV 61
Query: 170 NSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
N+LINMY +C +E A ++K++ +++V SW+A++ + G + LKL +M
Sbjct: 62 NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P+ + ++S LS+C GAL+ G+ H ++ +V V +++MY KCG +E+
Sbjct: 122 L-APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEA 180
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M K +++++ I G A G+ + A IF +M +EG+ P+ + Y+ VL+A S
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSP 240
Query: 348 GLVNEGLLCFDRM 360
+ G R+
Sbjct: 241 AALKWGKAVHSRI 253
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/584 (38%), Positives = 350/584 (59%), Gaps = 7/584 (1%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+++ ++IL C L + +H +V+K G ++ F ++ L+ A +G+++
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA--KFGNLE 368
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A F+Q+ +N++I + + + A + +M G +PD T +L A
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 143 KLQALKEGMQIHGHVFKVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ + K +HG + + G+ D+ + N++++MY K ++ A +F+ + K V SW+
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWN 488
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+I +A NGL SE ++++ M K P + VS+L A H+GAL G HG +I+
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIK 548
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
L+V V T LID+Y KCG L + LF + + +T++ +IS +HG ++ L +
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EML EG++PD V +V +LSACSH+G V EG CF R+ EY I P+++HYGC+VDL+G
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLG 667
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L A + I+ MP+Q + +W +LL A ++H N+E+G+ A+ LF+++S + YVL
Sbjct: 668 RAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA +W V K+R+ +GL ++PG+S +EV RKV F + ++SHP IYE
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + ++K GY PD S VL+DV+EDEK L HS++LAIAF +I SPIRI +N
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH TK IS I +REI+VRD RFH FKDG CSC DYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 200/391 (51%), Gaps = 19/391 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C L + +K+H K GF WN F A++L+ S +G A S+F +
Sbjct: 224 VLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHM--YSRFGFTGIARSLFDDMPFRDM 281
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I G ++ +AL + +EM G++ + T ++ C +L + M IH +
Sbjct: 282 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLY 341
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G E DLFV N+LINMY K +E A F+QM V SW++IIAA+ N
Sbjct: 342 VIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA 401
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSLI 275
F +M ++P+ LVS+ S + HG ++R + +V++ +++
Sbjct: 402 HGFFVKM-QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PD 333
DMY K G L+ +F ++ K ++++ +I+G A +G EA+ ++ +M+ E E P+
Sbjct: 461 DMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPN 519
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGE 388
+V +L A +H G + +G MK+ R++ T H C++D+ G+ G L +
Sbjct: 520 QGTWVSILPAYAHVGALQQG------MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 573
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A+ L +P Q++ V W +++S +H + E
Sbjct: 574 AMSLFYQVP-QESSVTWNAIISCHGIHGHAE 603
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 22/372 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +HA ++ G + F ++ LV A + G + + F QI + + +N++I +V
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYA--NLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193
Query: 108 KEVEFEEALF-LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
F EA+ Y + + PD +TFP + KAC L +G +IH FK+GF+ ++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNV 250
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FV SLI+MY + A ++F M + + SW+A+I+ NG ++ L + EM E
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ +VS+L C LG + H +I++ ++ V +LI+MY K G LE
Sbjct: 311 GI-KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
F+ M ++++ +I+ + A F +M G +PD +L+ S
Sbjct: 370 ARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPD------LLTLVSL 423
Query: 347 AGLVNEGLLCFDRMKLEYRI------VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
A +V + C + + I + V VVD+ + G+L A ++ + +P++
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK- 482
Query: 401 NDVV-WRSLLSA 411
DV+ W +L++
Sbjct: 483 -DVISWNTLITG 493
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 23/325 (7%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G + + F LF + K K +H + G +F+ L+N+Y V +
Sbjct: 114 GNQNEEIDFNFLFDSSTKTPFAK---CLHALLVVAGKVQSIFISTRLVNLYANLGDVSLS 170
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
F Q+ QK V +W+++I+A+ NG + E + F ++ RP+ VL AC
Sbjct: 171 RCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC-- 228
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
G L G+ H + NV V SLI MY + G LF M + +++ M
Sbjct: 229 -GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 287
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC---FDRMKL 362
ISGL +G +AL + EM EG++ + V V +L C G ++ +L + L
Sbjct: 288 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL 347
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIG 421
E+ + + ++++ + G L +A + Q M I DVV W S+++A + + +
Sbjct: 348 EFDLFVS----NALINMYAKFGNLEDARKAFQQMFI--TDVVSWNSIIAAYEQNDD---- 397
Query: 422 EIAAKNLF---QINSHHPSDYVLLS 443
+ A F Q+N P L+S
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVS 422
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/605 (36%), Positives = 359/605 (59%), Gaps = 12/605 (1%)
Query: 10 SLLLTQPEEPP-----KGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPF 64
SL + P P P+ L +++ +++L+ K++ + +HA +++ G +PF
Sbjct: 6 SLPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPF 65
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
L+ +C+ H ++DYA IF+ P + + LI GFV + +A+ LY+ M
Sbjct: 66 MVFELLRSCSKCH--AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLH 123
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ PDN+ ++ KAC AL+EG ++H K+G + V+ ++ +YGKC ++
Sbjct: 124 DSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGD 183
Query: 185 ASAIFKQMDQKSVAS----WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
A +F++M + VA W+A+I N + L+ F M E RP E +V VL
Sbjct: 184 ARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENV-RPNEFTIVCVL 242
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SAC+ LGAL++G+ H + + LN+ V +LI+MY +CG +++ +F M D+ +
Sbjct: 243 SACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVI 302
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
TY+ MISGL+M+G+ ++A+ +F M+ L P +V +VGVL+ACSH GLV+ G F M
Sbjct: 303 TYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSM 362
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+Y + P ++HYGC+VDL+GR G L EA +LI++M + + ++ +LLSA K+H NLE+
Sbjct: 363 TRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLEL 422
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GE AK L YVLLS++YA + +W + A++R +M G+ + PG S +EV
Sbjct: 423 GEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNN 482
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
++++F+ D HP + IYE + ++ L+ EGY P+ VL+D+++ EK L HS++
Sbjct: 483 EIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSER 542
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAI + LI + IR+ +NLR+C DCH+ KLI+ I R+++VRDR RFH F++G CS
Sbjct: 543 LAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACS 602
Query: 601 CRDYW 605
C DYW
Sbjct: 603 CGDYW 607
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 233/610 (38%), Positives = 349/610 (57%), Gaps = 39/610 (6%)
Query: 28 RLKEQECL-TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS 86
R +E E +++ K++ ++HA +L+ G + NP L + A G +D +
Sbjct: 43 RFQEVERFASLIDKSKSVAHLLQIHASLLRRGLYHNPILNFKLQRSYAA--LGRLDCSVF 100
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F DEP F F+ +I V+ F+ A Y++M GVEP+ FTF ++ K+C+
Sbjct: 101 VFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS---- 156
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGK-----CEKVEF----------------- 184
L+ G +H K+G DL+V+ L+++Y + C + F
Sbjct: 157 LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTC 216
Query: 185 ---------ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
A ++F+ M ++ V W+ +I +A +G+ +E LKLF M K P E
Sbjct: 217 YSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVT 275
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+++VLSAC LGAL+ G+ H + +NV V T+LIDMY KCG LE +F +
Sbjct: 276 VLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIR 335
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
DK + ++ MI G AMHG + AL +F EM G +P D+ ++G+LSAC H GLV EG
Sbjct: 336 DKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRS 395
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M+ +Y I P ++HYGC+V+L+GRAG L EA L+++M I + V+W +LL ++H
Sbjct: 396 FFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLH 455
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N+++GE AK L + YVLLSNMYA W VAK+RT M G+ + G S
Sbjct: 456 VNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSS 515
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+EV KV++FV+ +R HP IY M++++ LK GY+P VL D+ E++K + L+
Sbjct: 516 IEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLE 575
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF LI G+ ++I +NLR+C+DCHT K+IS I R+I++RDR RFH F+
Sbjct: 576 VHSEKLAIAFGLISTKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFE 635
Query: 596 DGTCSCRDYW 605
DG CSC DYW
Sbjct: 636 DGLCSCGDYW 645
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/634 (37%), Positives = 358/634 (56%), Gaps = 44/634 (6%)
Query: 13 LTQPEEPPKGPELNLRLKEQ----------ECLTILKTCKNLEEFKKVHAHVLKWGFFWN 62
L++ EEP K + R++ Q L L K+L E ++H K GF +
Sbjct: 97 LSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSD 156
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
PF + LV A G + A +F ++ ++ +I G+ + F +AL L+ EM
Sbjct: 157 PFVQTGLVRMYAAC--GRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEM 214
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE-- 180
VEPD + AC + L G IH + + D +Q++L+ MY C
Sbjct: 215 KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSM 274
Query: 181 -----------------------------KVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++E A ++F QM +K + WSA+I+ +A +
Sbjct: 275 DLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESD 334
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E L LF EM + +P++ ++SV++AC HLGALD K H + +N + +
Sbjct: 335 SPQEALNLFNEMQSLGI-KPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN 393
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI+MY KCG LE+ +F M K ++++ MIS AMHG AL F +M E +E
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE 453
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + +VGVL ACSHAGLV EG F M E+ I P HYGC+VDL GRA +L EALE
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
L+++MP+ N ++W SL++A +VH +E+GE AAK L +++ H +V LSN+YA+A+R
Sbjct: 514 LVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARR 573
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV ++R M KG+++ G S E+ ++++F+ DRSH D IYE ++++ +LK
Sbjct: 574 WEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKL 633
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GYSP+ +L D++E+EK+E + HS+KLA+ + L+ GS IRI +NLR+C DCHT+
Sbjct: 634 VGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTF 693
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KL S +YEREI+VRDR RFH +KDG CSC+DYW
Sbjct: 694 IKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 208/419 (49%), Gaps = 49/419 (11%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV-ATCALSHWGSMDYACSIFRQIDE 93
+ L + +L K+VHA +L+ + LV ++CALS S+DYA S+F I +
Sbjct: 27 FSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALS--SSLDYALSVFNLIPK 84
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P N +R + E E+ L +Y M +G+ D F+FP L KA +++++L EG++I
Sbjct: 85 PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG K+GF+ D FVQ L+ MY C ++ A +F +M + V +WS +I + +GL+
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLF 204
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
++ L LF EM N P+E +L +VLSAC G L GK H ++ N ++ ++++
Sbjct: 205 NDALLLFEEMKNYNV-EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSA 263
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLT-------------------------------Y 302
L+ MY CG ++ L LF M K + +
Sbjct: 264 LVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCW 323
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
S MISG A +EAL++F+EM G++PD V + V++AC+H G D+ K
Sbjct: 324 SAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLG-------ALDQAKW 376
Query: 363 EYRIVPTVQHYG------CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ V G ++++ + G L A + MP ++N + W ++SA +H
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMH 434
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/576 (39%), Positives = 345/576 (59%), Gaps = 10/576 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWN---PFCASNLVATCALSHWGSMDYACSIFRQ 90
++ C N+E +++H+ ++ G + C N+ A C++ GSM A IF Q
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD--GSMCAARKIFDQ 334
Query: 91 IDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
I + F + +I G+V++ + EEAL L+ M V P++FTF + KACA L AL+
Sbjct: 335 ILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRI 394
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+ H K+GF V NSLI+MY + +++ A F + +K++ S++ +I A+A
Sbjct: 395 GEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAK 454
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N E L+LF E+ ++ S+LS +G + G+ H +I++ LN
Sbjct: 455 NLNSEEALELFNEIEDQG-MGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS 513
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LI MY +CG +E +F M D+ ++++ +I+G A HG +AL +F +ML EG
Sbjct: 514 VCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEG 573
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+ V Y+ VLSACSH GLVNEG F M E+ ++P ++HY C+VD++GR+G L EA
Sbjct: 574 VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEA 633
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
++ I SMP + + +VWR+ L A +VH NLE+G+ AAK + + H P+ Y+LLSN+YA
Sbjct: 634 IQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAST 693
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W +V+ IR M K L + G S VEV KV+KF D SHP IY+ + + ++
Sbjct: 694 SKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKI 753
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY P++ VL DV+E++K + L HS+K+A+AF LI S+ PIR+ +NLR+C DCH
Sbjct: 754 KKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCH 813
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ K IS+ REIIVRD RFH KDG CSC +YW
Sbjct: 814 SAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 11/372 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+ V+K G+ + C + + G + A +F ++ E A + +I ++
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
EA+ L+ EM G EPD FT + ACA ++ L G Q+H + G D V
Sbjct: 250 GYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG 309
Query: 170 NSLINMYGKCE---KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS-ECLKLFGEMNN 225
LINMY KC + A IF Q+ +V SW+A+I + G + E L LF M
Sbjct: 310 CCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMIL 369
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYVKCGCL 284
P S L AC +L AL +G+ ++ S++N V SLI MY + G +
Sbjct: 370 THVI-PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC-VANSLISMYARSGRI 427
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ F ++ +K ++Y+ +I A + +EAL +F+E+ +G+ + +LS
Sbjct: 428 DDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGA 487
Query: 345 SHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
+ G + +G R +K ++ +V + ++ + R G + A ++ + M +N +
Sbjct: 488 ASIGTIGKGEQIHARVIKSGLKLNQSVCN--ALISMYSRCGNIESAFQVFEDME-DRNVI 544
Query: 404 VWRSLLSASKVH 415
W S+++ H
Sbjct: 545 SWTSIITGFAKH 556
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 94 PGAFDFNTLIRGFVKEVE---FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
P + N L ++E+ +A+ M +G PD T+ K C + ++ G
Sbjct: 26 PTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIG 85
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAAHAS 209
+H + + + D NSLI++Y KC + E A++IF+ M + + SWSA+++ A+
Sbjct: 86 TLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFAN 145
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNV 268
N + L F +M E + P E + AC+ + +G G +++ +V
Sbjct: 146 NNMGFRALLTFVDM-IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV 204
Query: 269 IVETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V LIDM+VK G L +F M ++ +T+++MI+ L G EA+ +F EM+
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMIL 264
Query: 328 EGLEPDDVVYVGVLSACSHAGLV 350
G EPD GV+SAC++ L+
Sbjct: 265 SGYEPDRFTLSGVISACANMELL 287
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L C + D+G H L ++ L+ + SLI +Y KCG EK +F++M
Sbjct: 73 LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRD 132
Query: 300 L-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
L ++S M+S A + G AL F +M+ G P++ + ACS A V+ G F
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192
Query: 359 -RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+K Y G + + G L A ++ + MP ++N V W +++
Sbjct: 193 FVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMP-ERNAVTWTLMIT 244
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/584 (38%), Positives = 346/584 (59%), Gaps = 34/584 (5%)
Query: 53 HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEF 112
H +K GF N F + +L +D A +F D +N ++ G+ + +F
Sbjct: 132 HAVKHGFDSNLFVQKAFIHMFSLCRL--VDLARKVFDMGDAWEVVTWNIMLSGYNRVKQF 189
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
+++ L+ EM +RGV P++ T + AC+KL+ L+ G I+ ++ E +L ++N L
Sbjct: 190 KKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL------------------WS 214
I+M+ C +++ A ++F M + V SW++I+ A+ G W+
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309
Query: 215 -------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
E L LF EM +P+E +VS+L+AC HLGAL+LG+ + +
Sbjct: 310 AMIDGYLRMNRFIEALALFREMQMSNV-KPDEFTMVSILTACAHLGALELGEWVKTYIDK 368
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
N + V +LIDMY KCG + K +F+ M K + T++ MI GLA++G G+EAL++
Sbjct: 369 NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAM 428
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
FS M+ + PD++ Y+GVL AC+HAG+V +G F M +++ I P V HYGC+VDL+G
Sbjct: 429 FSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLG 488
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L EA E+I +MP++ N +VW SLL A +VH N+++ E+AAK + ++ + + YVL
Sbjct: 489 RAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVL 548
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
L N+YA +RW ++ ++R M +G+ ++PG SL+E+ VY+FV+ D+SHP IY
Sbjct: 549 LCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAK 608
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ M L GYSPD S+V D+ E++K L HS+KLAIA+ALI G IRI +N
Sbjct: 609 LENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKN 668
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LRMC DCH KL+S Y RE+IVRD+ RFH F+ G+CSC ++W
Sbjct: 669 LRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 201/407 (49%), Gaps = 36/407 (8%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+++L+ CK++ + K++H+H +K G +P ++A C G M YA +F I +P
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQP 70
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
F +NT+I+G+ + + + +Y M ++PD FTFP L K + AL+ G +
Sbjct: 71 TLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLL 130
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H K GF+ +LFVQ + I+M+ C V+ A +F D V +W+ +++ + +
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFK 190
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ LF EM ++ P LV +LSAC+ L L+ GK + + I N+I+E L
Sbjct: 191 KSKMLFIEM-EKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK------------------ 316
IDM+ CG +++ +F M ++ ++++ +++G A GQ
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309
Query: 317 -------------EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
EAL++F EM ++PD+ V +L+AC+H G + G + + ++
Sbjct: 310 AMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE--WVKTYID 367
Query: 364 YRIVPTVQHYG-CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ G ++D+ + G +G+A ++ + M ++ W +++
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH-HKDKFTWTAMI 413
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/510 (42%), Positives = 321/510 (62%), Gaps = 32/510 (6%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
V PD FT + KAC KL + G IHG K+GF +LF+QN ++N+YG C ++ A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 187 AIFKQMDQKSVASWSAIIAAHASNG------------------LWS-------------E 215
+F++M Q+ +W+ +IA A G W+ E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ LF ++ +E RP E +VSVL+AC LG LDLG+ H ++ NV V +LI
Sbjct: 126 AIDLFMKLEDEAV-RPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLI 184
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMYVKCGCLE +F M ++ +++S MI+GLAMHGQ +EAL +FSEM++ G++P+ V
Sbjct: 185 DMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGV 244
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++G+L ACSH GL++EG F M +Y ++P ++HYGCVVDL RAG+L EA E I S
Sbjct: 245 TFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILS 304
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
MPI+ N VVW +LL KVH N+++ E A K+L +++ + YV++SN+YA A+RW D
Sbjct: 305 MPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDA 364
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
A++R M +G+ ++ G+S + V V++FV+ D++HP ++I ++ ++ ++K GY+
Sbjct: 365 ARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYA 424
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P S VL D++E EK + L HS+KLA+ F L+ +G+PIRI +NLR+C DCH K+I
Sbjct: 425 PKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKII 484
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S I REIIVRDR RFH F+DG CSCRD+W
Sbjct: 485 SGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 157/346 (45%), Gaps = 43/346 (12%)
Query: 34 CLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATCA------------- 74
C +LK C L + K +H K GF N F + NL C
Sbjct: 13 CSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMP 72
Query: 75 -------------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
L+ G +D A F ++ + ++I GFV+ + EA+ L+ +
Sbjct: 73 QRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMK 132
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
+ + V P+ T ++ ACA L L G +H + K GF+ ++ V N+LI+MY KC
Sbjct: 133 LEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGC 192
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+E A +F +M++++V SWSA+IA A +G E L LF EM +P + +L
Sbjct: 193 LENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGV-KPNGVTFIGLLH 251
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMADKCQ- 299
AC+H+G +D G+ S+ + + I ++D++ + G LE+ M K
Sbjct: 252 ACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNG 311
Query: 300 LTYSVMISGLAMHGQ---GKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ + ++ G +H +EA+ SE L+P + Y V+S
Sbjct: 312 VVWGALLGGCKVHKNIDLAEEAIKHLSE-----LDPLNDGYYVVIS 352
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 344/578 (59%), Gaps = 8/578 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++L+ C ++ + K+HAH+L G+ NP + L+ CA+S GS+ YA +F +I P
Sbjct: 9 LSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNP 68
Query: 95 GAFDFNTLIRGFVKEVEFEE--ALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGM 151
+N++IRGF + + A+ YN M PD +TF L KAC + + +
Sbjct: 69 QTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCR 128
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++HG + + G++ D+ + +LI Y +E A +F++M + + SW+++I+ + G
Sbjct: 129 EVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMISCYCQTG 188
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L E LK++ +M + LVS+LS+C H+GAL +G H N+ V
Sbjct: 189 LHEEALKMYDQMRISNVGF-DGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLVENIFVG 247
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LIDMY KCG L L +F M + T++ MI G +HG+G EA++ F ML G+
Sbjct: 248 NALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVR 307
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + ++G+L CSH GLV EG+ F M E+ + P ++HYGC+VDL GRAG L EALE
Sbjct: 308 PNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALE 367
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I+S P Q + V+WR+LL + K+H N+EIGE+A +NL Q+ S D VLLS +YA A+
Sbjct: 368 VIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKD 427
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
VA++R + S+G+ +PG+S +EV +V++FV D+SHP IY + ++ +
Sbjct: 428 LQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEVIHRASL 487
Query: 512 EGYSPDISQVLRDVDEDEK----RERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
GY+ + S ++ + + + HS+KLAIA+ L +G+ + I +NLR+C D
Sbjct: 488 VGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRD 547
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH +TK +S+ ++REIIVRDR RFH FK G CSC+++W
Sbjct: 548 CHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 585
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 339/601 (56%), Gaps = 38/601 (6%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++ K + ++HA + + G +P N + + G +DY+ ++F + P
Sbjct: 35 VLIDKSKTISHLLQIHAVLFRHGLDHHPIL--NFKLQRSYASLGRLDYSVALFGRTQNPS 92
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F + +I G E+AL Y +M +GVEP+ FTF ++ K C ++ G +H
Sbjct: 93 VFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHS 148
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS---------------- 199
K+GF+ DL+V+ L+++Y + V A +F M +KS+ S
Sbjct: 149 QAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDA 208
Query: 200 ---------------WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
W+ +I + NG+ +E L LF M K +P E ++SVLSAC
Sbjct: 209 ARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKA-KPNEVTVLSVLSACG 267
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
LGAL+ G+ H + N NV V T+L+DMY KCG LE +F + DK + ++
Sbjct: 268 QLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNS 327
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MI G AMHG +EAL +F M R GL P ++ ++G+LSAC H+G V EG F++MK EY
Sbjct: 328 MIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEY 387
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA 424
I P ++HYGC+V+L+GRAG + +A EL+++M I+ + V+W +LL A ++H + +GE
Sbjct: 388 GIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKI 447
Query: 425 AKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYK 484
+ L N + Y+LLSN+YA W VA++RT M G+ + PG S +EV KV++
Sbjct: 448 VELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHE 507
Query: 485 FVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIA 544
F++ +HP IY M+ ++ LK GY+P VL D+ E EK L+ HS+KLAIA
Sbjct: 508 FLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIA 567
Query: 545 FALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
F LI+ G+ I+I +NLR+C DCH TKLIS I R+I+VRDR RFH F +G+CSC DY
Sbjct: 568 FGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDY 627
Query: 605 W 605
W
Sbjct: 628 W 628
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/608 (37%), Positives = 359/608 (59%), Gaps = 44/608 (7%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG--SMDYACSIFRQIDE- 93
+LK +L + K++HA V+ G N ++L+ S+ G ++ +A +F Q
Sbjct: 61 LLKKRPSLTQIKQIHAQVVTHGLAQN----TSLLGPLIHSYIGCRNLSFARIVFDQFPSL 116
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQALKE-G 150
P +N +I+ + K +E+L+L+++M G D +TF +F AC++ L+ G
Sbjct: 117 PPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYG 176
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+HG V K G+E D+FV NSL+NMY ++ A +F +M Q+ V +W++++ +A
Sbjct: 177 ENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMR 236
Query: 211 G-------------------------------LWSECLKLFGEMNNEKCWRPEESILVSV 239
G ++E L+ F +M +P E++LVS+
Sbjct: 237 GELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSI 296
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
LSAC HLGALD GK H + +N L+ + T+LIDMY KCG ++ +F + +
Sbjct: 297 LSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDL 356
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
LT++ MISGL+MHG G E L FSEML EG +PDD+ +GVL+ CSH+GLV EGL F
Sbjct: 357 LTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHD 416
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M + IVP ++HYGC++DL+GRAG L A E I+SMP++ + V WR+LLSA ++H +++
Sbjct: 417 MIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVD 476
Query: 420 IGEIAAKNLFQI-NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
+GE ++ ++ H YVLLSN+YA +W V K+R M+ +G PG S +E+
Sbjct: 477 LGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEI 536
Query: 479 ARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDEDEKRERLKGH 537
V++F++ D+ HP I + ++++ ++ E GY P QVL D++E++K + + H
Sbjct: 537 DGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDKEQAVSWH 596
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLA+AF L+ +G+ IRI +NLR C DCH+ K IS+++ REI+VRDR RFH F+ G
Sbjct: 597 SEKLAVAFGLLSTQEGT-IRITKNLRTCEDCHSAMKTISLVFNREIVVRDRSRFHTFRYG 655
Query: 598 TCSCRDYW 605
CSC DYW
Sbjct: 656 NCSCTDYW 663
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/575 (39%), Positives = 336/575 (58%), Gaps = 10/575 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL+TC +L +++H V+K GF +N + S L+ A G +D A I +++
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYA--KHGELDTARGILQRLR 477
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + +I G+ + F EAL L+ EM +G+ DN F + ACA +QAL +G Q
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ 537
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH + G+ DL + N+L+++Y +C + + A F+++D K SW+A+I+ A +G
Sbjct: 538 IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGH 597
Query: 213 WSECLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
E L++F +MN E ++ S +SA + + GK H +I+
Sbjct: 598 CEEALQVFSQMNQAGV---EANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEA 654
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
LI +Y KCG +E F M +K ++++ MI+G + HG G EA+S+F EM + GL
Sbjct: 655 SNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGL 714
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+ V +VGVLSACSH GLVNEGL F M E+ +VP +HY CVVDL+GRA +L A
Sbjct: 715 MPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAR 774
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
E I+ MPI+ + ++WR+LLSA VH N+EIGE AA++L ++ + YVLLSNMYA +
Sbjct: 775 EFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSG 834
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W + R M +G+ + PG S +EV ++ F DR HP + IYE I + +
Sbjct: 835 KWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAG 894
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY D +L DV++++K HS+KLA+AF L+ L+ PIR+ +NLR+CNDCH
Sbjct: 895 EIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHN 954
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ K +S I R I+VRD RFH F+ G CSC+DYW
Sbjct: 955 WIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 170/321 (52%), Gaps = 6/321 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C +E FK ++H ++KWG F + LV S WG++ A IF ++
Sbjct: 218 SVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL--YSRWGNLIAAEQIFSKMH 275
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N+LI G + + AL L+ +M ++PD T +L ACA + A +G Q
Sbjct: 276 RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ 335
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H +V K+G DL ++ SL+++Y KC +E A F + ++V W+ ++ A+ G
Sbjct: 336 LHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGN 395
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
SE +F +M E P + S+L CT LGALDLG+ H +I++ NV V +
Sbjct: 396 LSESYWIFLQMQIEGL-MPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS 454
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ + + + ++ ++++ MI+G H EAL +F EM +G+
Sbjct: 455 VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRS 514
Query: 333 DDVVYVGVLSACSHAGLVNEG 353
D++ + +SAC+ +N+G
Sbjct: 515 DNIGFSSAISACAGIQALNQG 535
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 198/402 (49%), Gaps = 20/402 (4%)
Query: 26 NLRLKEQECLTILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
N+ E ++L+ C + +++HA ++ GF +P + L+ S G +
Sbjct: 106 NVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDL--YSKNGHV 163
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D A +F ++ + + +I G + +EA+ L+ +M + V P + F ++ AC
Sbjct: 164 DLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSAC 223
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
K++ K G Q+HG + K G + FV N+L+ +Y + + A IF +M ++ S++
Sbjct: 224 TKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYN 283
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++I+ A G L+LF +M + C +P+ + S+LSAC +GA GK H +I+
Sbjct: 284 SLISGLAQRGFSDRALQLFEKMQLD-CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIK 342
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ ++I+E SL+D+YVKC +E F + + ++VM+ G E+ I
Sbjct: 343 MGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWI 402
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--V 376
F +M EGL P+ Y +L C+ G ++ G ++ +++ + Y C +
Sbjct: 403 FLQMQIEGLMPNQYTYPSILRTCTSLGALDLG------EQIHTQVIKSGFQFNVYVCSVL 456
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
+D+ + G L A ++Q + ++ DVV + + A H+L
Sbjct: 457 IDMYAKHGELDTARGILQRL--REEDVVSWTAMIAGYTQHDL 496
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 204/402 (50%), Gaps = 19/402 (4%)
Query: 24 ELNLRLKEQECLTI---LKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
++ L + +C+T+ L C ++ + K++H++V+K G +S+L+ +L
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGM------SSDLIIEGSLLD 357
Query: 78 WG----SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
++ A F + +N ++ + + E+ +++ +M G+ P+ +T
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYT 417
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+P++ + C L AL G QIH V K GF+ +++V + LI+MY K +++ A I +++
Sbjct: 418 YPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLR 477
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++ V SW+A+IA + + L++E LKLF EM N+ R + S +SAC + AL+ G+
Sbjct: 478 EEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI-RSDNIGFSSAISACAGIQALNQGQ 536
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + + ++ + +L+ +Y +CG + F + K ++++ +ISG A G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+EAL +FS+M + G+E + + +SA ++ + +G M ++ +
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQ-IHAMMIKTGYDSETEAS 655
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ L + G + +A MP ++N V W ++++ H
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQH 696
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 153/579 (26%), Positives = 251/579 (43%), Gaps = 73/579 (12%)
Query: 24 ELNLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E +R Q L + + C N L + KK+HA + K GF S L+ L+H G
Sbjct: 3 ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLI-DIYLAH-GE 60
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +F I +N +I G + + + L L++ M V PD TF ++ +A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 141 CAKLQA-LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C+ +A + QIH + GF V N LI++Y K V+ A +F+++ K S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W A+I+ + NG E + LF +M+ P + SVLSACT + LG+ HG +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVI-PTPYVFSSVLSACTKIELFKLGEQLHGFI 239
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ + V +L+ +Y + G L +F M + +++Y+ +ISGLA G AL
Sbjct: 240 VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAG--------------------LVNEGLL---- 355
+F +M + ++PD V +LSAC+ G L+ EG L
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLY 359
Query: 356 --CFD-RMKLEYRIVPTVQH---YGCVVDLMGRAGMLGEALELIQSMPIQ---QNDVVWR 406
CFD EY + ++ + ++ G+ G L E+ + M I+ N +
Sbjct: 360 VKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYP 419
Query: 407 SLLSASKVHHNLEIGE----IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA-----K 457
S+L L++GE K+ FQ N + S +L +MYA+ D A +
Sbjct: 420 SILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCS---VLIDMYAKHGE-LDTARGILQR 475
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYK-FVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
+R E G++ ++ + K F + DNI G+S
Sbjct: 476 LREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNI--------------GFSS 521
Query: 517 DIS-----QVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
IS Q L + + + G+S+ L+I AL+ L
Sbjct: 522 AISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSL 560
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 121/233 (51%), Gaps = 2/233 (0%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M ERG+ + T+ LF+ C +L + ++H +FK GF+ + + + LI++Y +
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V+ A +F + +V+ W+ +I+ + L S+ L LF M E P+ES SVL
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENV-TPDESTFASVLR 119
Query: 242 ACTHLGA-LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
AC+ A + + H +I + + +V LID+Y K G ++ +F + K +
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++ MISGL+ +G+ EA+ +F +M + + P V+ VLSAC+ L G
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLG 232
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/611 (36%), Positives = 352/611 (57%), Gaps = 34/611 (5%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ + + +L + +E +++HA + G + + V ALS +DYA I
Sbjct: 3 RIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQI 62
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQ 145
+ ++P F N++IR K E++ Y + G ++PDN+T L +AC L+
Sbjct: 63 LDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR 122
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMY----------------------------- 176
+ G+Q+HG + GF+ D VQ LI++Y
Sbjct: 123 MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVT 182
Query: 177 --GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
+C V FA +F+ M ++ +W+A+I+ +A G E L +F M E +
Sbjct: 183 ACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-KVNGV 241
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
++SVLSACT LGALD G+ H + RN + V + T+L+D+Y KCG +EK + +F M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+K T+S ++GLAM+G G++ L +FS M ++G+ P+ V +V VL CS G V+EG
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
FD M+ E+ I P ++HYGC+VDL RAG L +A+ +IQ MP++ + VW SLL AS++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
+ NLE+G +A+K + ++ + + YVLLSN+YA + W +V+ +R M SKG+ + PG S
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
++EV +V++F D+SHP + I + + +L+ GY D + V+ D+DE+EK + L
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDAL 541
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+K AIAF ++ L + PIRI +NLR+C DCH + +IS I+ REIIVRDR RFH F
Sbjct: 542 CLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHF 601
Query: 595 KDGTCSCRDYW 605
KDG CSC +W
Sbjct: 602 KDGHCSCNGFW 612
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/587 (37%), Positives = 347/587 (59%), Gaps = 32/587 (5%)
Query: 49 KVHAHVLKWGFFWNPFCASNLV--------ATCALSHWGSMD--------------YACS 86
+VH HV+K+GF F S LV CA + M CS
Sbjct: 163 QVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCS 222
Query: 87 -------IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+F + E + + +I GF + EA+ L+ EM +E D +TF ++
Sbjct: 223 RIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLT 282
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
AC + AL+EG Q+H ++ + ++ ++FV ++L++MY KC+ ++ A +F++M+ K+V S
Sbjct: 283 ACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVS 342
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH-GS 258
W+A++ + NG E +K+F +M N P++ L SV+S+C +L +L+ G H +
Sbjct: 343 WTAMLVGYGQNGYSEEAVKIFCDMQNNGI-EPDDFTLGSVISSCANLASLEEGAQFHCRA 401
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L+ + + + V +L+ +Y KCG +E LF M+ +++++ ++SG A G+ E
Sbjct: 402 LVSGLISF-ITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANET 460
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F ML G +PD V ++GVLSACS AGLV +G F+ M E+RI+P HY C++D
Sbjct: 461 LRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMID 520
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L RAG L EA + I MP + + W SLLS+ + H N+EIG+ AA++L ++ H+ +
Sbjct: 521 LFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTAS 580
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y+LLS++YA +W +VA +R M KGL + PG S ++ +V+ F + D+S+P D I
Sbjct: 581 YILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQI 640
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ +++ EGY PD++ VL DVD+ EK + L HS+KLAIAF LI + G PIR+
Sbjct: 641 YSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRV 700
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TK IS I +REI+VRD RFH FKDG CSC D+W
Sbjct: 701 VKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 198/440 (45%), Gaps = 75/440 (17%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+LK C++ KK+H H++K F NP F +NLV+ A + + + YA +F Q+ +
Sbjct: 21 LLKHCRDT---KKIHCHIIKA--FRNPEIFLLNNLVS--AYAKFDRITYARRVFDQMPQR 73
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE----- 149
+ +NTL+ + K E +++ M R + N A LQ++K
Sbjct: 74 NLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLML 133
Query: 150 ---------------------------GMQIHGHVFKVGFECDLFVQNSLINMYGK---- 178
G+Q+HGHV K GF+ +FV + L++MY K
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 179 ---------------------------CEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
C ++E + +F M +K SW+A+IA NG
Sbjct: 194 FCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNG 253
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L E + LF EM E ++ SVL+AC + AL GK H +IR N+ V
Sbjct: 254 LDREAIDLFREMRLENL-EMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVG 312
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++L+DMY KC ++ +FR M K ++++ M+ G +G +EA+ IF +M G+E
Sbjct: 313 SALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIE 372
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PDD V+S+C++ + EG F L ++ + +V L G+ G + ++
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIEDSHR 431
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
L M ++V W +L+S
Sbjct: 432 LFSEMSY-VDEVSWTALVSG 450
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 62/275 (22%)
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV--- 197
C L+ ++ +IH H+ K ++F+ N+L++ Y K +++ +A +F QM Q+++
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 198 ----------------------------ASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
SW+++I+A+A G + +K + M +
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK--------- 280
L ++L + G + LG HG +++ V V + L+DMY K
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 281 ----------------------CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
C +E LF M +K ++++ MI+G +G +EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ +F EM E LE D + VL+AC + EG
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEG 293
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/607 (38%), Positives = 350/607 (57%), Gaps = 19/607 (3%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQEC-LTILKTCK--NLEEFKKVHAHVLKWGFFWNP 63
L Q+L L E P +Q C L IL + +L + VH ++ GF +P
Sbjct: 54 LKQALYLLSHESNPT---------QQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDP 104
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
F A+ L+ S ++D A +F + + + +N L R + L LY M
Sbjct: 105 FLATKLINM--FSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMN 162
Query: 124 ERGVEPDNFTFPALFKACAK----LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
GV D FT+ L KAC + L++G +IH H+ + G+ + V +L++MY +
Sbjct: 163 MMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARF 222
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN-NEKCWRPEESILVS 238
V +ASA+F +M K+V SWSA+IA +A NG E L+LF EM N P +VS
Sbjct: 223 GCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVS 282
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
VL AC AL+ GK H ++R + V ++LI MY +CG LE G +F M K
Sbjct: 283 VLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKD 342
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
+ ++ +IS +HG G++A+ IF EM+ G P + ++ VL ACSH GLV EG F+
Sbjct: 343 VVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFE 402
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
M E+ I P+V+HY C+VDL+GRA L EA ++I+ + I+ VW SLL A ++H ++
Sbjct: 403 SMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHV 462
Query: 419 EIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
E+ E A+K LF++ + +YVLL+++YA A+ W +V +++ + S+ L + PG S +EV
Sbjct: 463 ELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEV 522
Query: 479 ARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHS 538
RK+Y F S D +P + ++ ++ + ++K GY+P VL D+D++EK + GHS
Sbjct: 523 RRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHS 582
Query: 539 QKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+KLA+AF LI+ S+G IRI +NLR+C DCH+ TK IS +REI+VRD RFH FKDG
Sbjct: 583 EKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGV 642
Query: 599 CSCRDYW 605
CSC DYW
Sbjct: 643 CSCGDYW 649
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 344/572 (60%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C + E K+H+ V+K G + F +L+ + G +D A +F I +
Sbjct: 114 VLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINL--YTKCGFIDNAFKVFDDIPD 171
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ I G+V + EA+ ++ + E G+ PD+F+ + AC + L+ G I
Sbjct: 172 KNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWI 231
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
++ + G ++FV +L++ YGKC +E A ++F M +K++ SWS++I +ASNGL
Sbjct: 232 DEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLP 291
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L LF +M NE +P+ +V VL +C LGAL+LG + N N ++ T+
Sbjct: 292 KEALDLFFKMLNEGL-KPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTA 350
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG +++ +FR M K ++ ++ ISGLAM G K+AL +F +M + G++PD
Sbjct: 351 LIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPD 410
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+VG+L AC+HAGLV EG F+ M+ + + P ++HYGC+VDL+GRAG L EA +LI
Sbjct: 411 RNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLI 470
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+SMP++ N +VW +LL ++H + ++ E+ K L + H +YVLLSN+YA + +W
Sbjct: 471 KSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWE 530
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ AKIR+ M+ +G+ + PG+S +EV V++F+ D SHP + IY + ++ LK G
Sbjct: 531 EAAKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAG 590
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y P VL D++E+EK + HS+KLA+AF LI + I + +NLR+C DCH K
Sbjct: 591 YVPTTDHVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIK 650
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I REIIVRD RFH F DG CSC+DYW
Sbjct: 651 HISRIAGREIIVRDNNRFHCFTDGLCSCKDYW 682
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 205/372 (55%), Gaps = 13/372 (3%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L+ K +HA +L+ G + + + ++ ++G+ +Y+ I Q EP F FNT+I
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSF--NFGNTNYSFRILDQTKEPNIFLFNTMI 80
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
RG V F+E++ +Y+ M + G+ PD+FTFP + KACA++ + G+++H V K G E
Sbjct: 81 RGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D FV+ SLIN+Y KC ++ A +F + K+ ASW+A I+ + G E + +F +
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E RP+ LV VLSAC G L G+ + N NV V T+L+D Y KCG
Sbjct: 201 -LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGN 259
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E+ +F M +K +++S MI G A +G KEAL +F +ML EGL+PD VGVL +
Sbjct: 260 MERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCS 319
Query: 344 CSHAGLVNEGLLCFDRMK----LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
C+ G + G + + L+ ++ T ++D+ + G + A E+ + M +
Sbjct: 320 CARLGALELGDWASNLINGNEFLDNSVLGTA-----LIDMYAKCGRMDRAWEVFRGMR-K 373
Query: 400 QNDVVWRSLLSA 411
++ VVW + +S
Sbjct: 374 KDRVVWNAAISG 385
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/544 (39%), Positives = 338/544 (62%), Gaps = 5/544 (0%)
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG-FVKEVEFEEALFLYNEM 122
F S +++ ALS +G+ DYA IF QI PG F +N++IRG ++ +E + L+ +M
Sbjct: 23 FLISKILSFAALSPFGNFDYARKIFSQIPNPGIFAYNSVIRGCLYTKIPSKEPIHLFKDM 82
Query: 123 FERGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
+G P+ FT + KAC+ + AL+EG QIH + + GF +VQ+SL+N Y KCE+
Sbjct: 83 VGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEE 142
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+ A +F ++ ++++ WSA+++ +A G+ +E L +F EM P+E LV VLS
Sbjct: 143 ITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGI-EPDEVSLVGVLS 201
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC +GALD+GK H + + + +++ + T+LI+MY KCGC+EK +F M K
Sbjct: 202 ACAMVGALDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKA 261
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+S MI GLA+HG ++AL++FS M +P+ V ++G+LSAC+H GLV++G + M
Sbjct: 262 WSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSM- 320
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
LE I P+++HYGC+VDL+ R G++ EA + +P + V+WR+LL A + L+
Sbjct: 321 LELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKA 379
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E+ A L ++ +Y++L+N+YA + V+ +R M G+ PG + +EV
Sbjct: 380 EMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGF 439
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V+ FV+ D SHP + I + + + ++ GY P +S VL V+++EK L HS++L
Sbjct: 440 VHNFVTGDWSHPEAEEIKKTLRDVALKILISGYKPFVSVVLHLVNDEEKENVLYEHSERL 499
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
AIA+ L+ + IRI +NLR+C DCH TK+IS IY+REIIVRDR RFH+F +GTCSC
Sbjct: 500 AIAYGLMKTKAPATIRIVKNLRVCGDCHEVTKIISKIYDREIIVRDRVRFHKFVNGTCSC 559
Query: 602 RDYW 605
+DYW
Sbjct: 560 KDYW 563
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C LEE K++HA +L+ GF +P+ S+LV S + A +F +I E
Sbjct: 98 VLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNF--YSKCEEITIARKVFDEITE 155
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
++ ++ G+ + EAL ++ EM G+EPD + + ACA + AL G +
Sbjct: 156 RNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWV 215
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H ++ K DL + +LINMY KC +E A IF +M K +WS++I A +GL
Sbjct: 216 HAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLA 275
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ L +F M + +P + +LSAC H G + GK
Sbjct: 276 EDALNVFSRMEEAQA-KPNHVTFIGILSACAHGGLVSDGK 314
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 351/585 (60%), Gaps = 5/585 (0%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E +++ E L +L C+ +F K++H + L+ GF + +N + GS
Sbjct: 393 EDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVA-GYAKCGS 451
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ YA +F ++ +N LI G V+ +AL LY M G+EPD FT +L A
Sbjct: 452 LHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSA 511
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA+L++L G +IHG + + GFE D F+ SL+++Y +C K+ A F M++K++ W
Sbjct: 512 CARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCW 571
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+ +I + N + L +F +M + K W P+E ++ L AC+ + AL LGK H +
Sbjct: 572 NTMINGFSQNEFPFDALDMFHQMLSSKIW-PDEISIIGALGACSQVSALRLGKELHCFAV 630
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
++ + V SLIDMY KCGC+E+ +F + K ++T++V+I+G +HG G++A+
Sbjct: 631 KSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIE 690
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M G PD V ++ +L+AC+HAGLV EGL +M+ + I P ++HY CVVD++
Sbjct: 691 LFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDML 750
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG L EALEL+ +P + + +W SLLS+ + + +L+IGE A L ++ +YV
Sbjct: 751 GRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYV 810
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
L+SN YAR +W +V K+R M GL + G S +E+ KV +F+ D S I +
Sbjct: 811 LISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQ 870
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
++E ++ GY PD S VL +++EDEK + L+ HS+KLAI+F L++ ++G+ +R+ +
Sbjct: 871 TWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCK 930
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH KL+S I +REIIVRD KRFH FK+G CSC DYW
Sbjct: 931 NLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 156/306 (50%), Gaps = 5/306 (1%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
KN+E +K+H + F N + T S S +C +F F +N
Sbjct: 107 KNIEIGRKIHNFISTSPHFQNDVVLITRLVT-MYSICDSPYDSCLVFNASRRKNLFLWNA 165
Query: 102 LIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
L+ G+++ F +A+F++ EM PDNFT P + KAC + ++ G +HG K
Sbjct: 166 LLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKT 225
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
D+FV N+LI MYGK VE A +F +M Q+++ SW++++ A NG++ E LF
Sbjct: 226 KVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLF 285
Query: 221 -GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
G +N ++ P+ + +V+V+ C G + LG HG ++ + V +SL+DMY
Sbjct: 286 KGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYS 345
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-LREGLEPDDVVYV 338
KCG L + LF +K ++++ MI G + + A + +M + + ++ ++V +
Sbjct: 346 KCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLL 404
Query: 339 GVLSAC 344
VL C
Sbjct: 405 NVLPVC 410
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L + C + + ++ G +IH + F+ D+ + L+ MY C+ + +F +K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ W+A+++ + N L+ + + +F EM + + P+ L V+ AC + + LG+
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++ +V V +LI MY K G +E + +F M + ++++ ++ +G
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 316 KEALSIFSEMLR--EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+E+ +F +L EGL PD V V+ C+ G V G++ F + L+ + ++
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMV-FHGLALKLGLCGELKVN 337
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G L EA L + ++N + W S++
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTN--EKNVISWNSMIGG 373
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/591 (39%), Positives = 350/591 (59%), Gaps = 28/591 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L C +LE K++HA+ LK G N F S LV + + S R
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV-----DMYCNCKQVLSGRRVF 361
Query: 92 DEPGAFD-----FNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQ 145
D G FD +N +I G+ + +EAL L+ M E G+ ++ T + AC +
Sbjct: 362 D--GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
A IHG V K G + D FVQN+L++MY + K++ A IF +M+ + + +W+ +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 206 AHASNGLWSECLKLFGEMNN----------EKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ + + L L +M N +P L+++L +C L AL GK
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H I+N A +V V ++L+DMY KCGCL+ +F + K +T++V+I MHG G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EA+ + M+ +G++P++V ++ V +ACSH+G+V+EGL F MK +Y + P+ HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
VVDL+GRAG + EA +L+ MP N W SLL AS++H+NLEIGEIAA+NL Q+ +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
S YVLL+N+Y+ A W ++R M +G+ + PG S +E +V+KFV+ D SHP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
+ + + + +++ EGY PD S VL +V+EDEK L GHS+KLAIAF +++ S G+
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+A+NLR+CNDCH TK IS I +REII+RD +RFHRFK+GTCSC DYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 138/256 (53%), Gaps = 6/256 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+R V+ EA+ Y +M G++PDN+ FPAL KA A LQ ++ G QIH HV+K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 162 FECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
+ D + V N+L+N+Y KC +F ++ +++ SW+++I++ S W L+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLG---ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
M +E P LVSV++AC++L L +GK H +R LN + +L+ M
Sbjct: 188 RCMLDENV-EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAM 245
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y K G L L + +T++ ++S L + Q EAL EM+ EG+EPD+
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 338 VGVLSACSHAGLVNEG 353
VL ACSH ++ G
Sbjct: 306 SSVLPACSHLEMLRTG 321
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 29/404 (7%)
Query: 35 LTILKTCKNLEE------FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
++++ C NL K+VHA+ L+ G N F + LVA +G + S
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAM-----YGKLGKLASSK 256
Query: 89 RQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+ G D +NT++ + + EAL EM GVEPD FT ++ AC+ L+
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 146 ALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
L+ G ++H + K G + + FV ++L++MY C++V +F M + + W+A+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A ++ N E L LF M + + V+ AC GA + HG +++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V+ +L+DMY + G ++ + +F M D+ +T++ MI+G ++AL + +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 325 ML-----------REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
M R L+P+ + + +L +C+ + +G ++ + V
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVG 555
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+VD+ + G L + ++ +P Q+N + W ++ A +H N
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 35/395 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK +L++ K++HAHV K+G+ + +N + G +F +I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRIS 160
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKE 149
E +N+LI ++E AL + M + VEP +FT ++ AC+ L + L
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H + + G E + F+ N+L+ MYGK K+ + + + + +W+ ++++
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNV 268
N E L+ EM E P+E + SVL AC+HL L GK H ++N S N
Sbjct: 280 NEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY C + G +F M D+ ++ MI+G + + KEAL +F M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 329 -GLEPDDVVYVGVLSACSHAG-----------LVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
GL + GV+ AC +G +V GL DR + VQ+ +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL---DRDRF-------VQN--TL 446
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+D+ R G + A+ + M ++ V W ++++
Sbjct: 447 MDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/531 (39%), Positives = 323/531 (60%), Gaps = 1/531 (0%)
Query: 75 LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
+SH S+D IF + E +NT+I G + + E L + EM ++PD+FT
Sbjct: 244 ISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTL 303
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
++ A+ + +G +IHG + G + +++V +SLI+MY KC +V + +F + +
Sbjct: 304 SSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE 363
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+ SW++IIA NGL+ E LK F +M K +P+ S++ AC HL L LGK
Sbjct: 364 RDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKI-KPKSYSFSSIMPACAHLTTLHLGKQ 422
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG + RN N+ + +SL+DMY KCG + +F M + ++++ MI G A+HG
Sbjct: 423 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGH 482
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+A+ +F +M EG+EP+ V ++ VL+ACSHAGLV+E F+ M L++ I P V+HY
Sbjct: 483 ALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYA 542
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
V DL+GRAG L EA + I MPI VW +LLSA +VH N+++ E A + +++
Sbjct: 543 AVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPK 602
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
+ Y+LL+N+Y+ A+RW + AK R + G+ ++P S +EV KVY F++ D SHP
Sbjct: 603 NTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPC 662
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
++ I E + + ++ EGY PD S+V DV+E++K+ + HS++LAI F +I+ G+
Sbjct: 663 YEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGT 722
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCHT TK IS I REI+VRD RFH FK+GTCSC DYW
Sbjct: 723 TIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 28/309 (9%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+ K+ + +++HA VLK F + + SH + + +F + P A +
Sbjct: 20 SIKSRSQAQQLHAQVLK---FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAW 76
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
++IR + ++L + M G+ PD+ FP++ KACA L L G +HG++ +
Sbjct: 77 KSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIR 136
Query: 160 VGFECDLFVQNSLINMYGKCEKVE-------FASAIFKQMDQKSVASWSAIIAAHASNGL 212
VG + DL+ N+L+NMY K ++ AS + +M +++ + +A + + G
Sbjct: 137 VGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLV-GNQGR 195
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ F + C E V + ++ C G I++IS +
Sbjct: 196 KVSDIEAFNY--DVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDIS------HS 247
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+D K +F MM +K ++++ +I+G A +G E L++ EM L+P
Sbjct: 248 MSVDSVRK---------IFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKP 298
Query: 333 DDVVYVGVL 341
D VL
Sbjct: 299 DSFTLSSVL 307
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN-MYGKCEKVEFASAIFKQMDQ 194
+L + +++ + Q+H V K F+ SL+ +Y + + +F +
Sbjct: 13 SLLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHF 70
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+W ++I + S+GL + L F M + P+ ++ SVL AC L L+LG+
Sbjct: 71 PPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLY-PDHNVFPSVLKACAMLMDLNLGES 129
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKG----LCLFRMMADKCQLTYSVMISGLA 310
HG +IR ++ +L++MY K L+K L +++ + + T SV + +
Sbjct: 130 LHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVL 189
Query: 311 MHGQGKEALSI 321
+ QG++ I
Sbjct: 190 VGNQGRKVSDI 200
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 328/530 (61%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G +D A ++FR++ + + ++I G+ +E EA+ L+ EM E G+ PD +T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
A+ CA+ + L EG ++H + + D+FV N+L++MY KC ++ A +F +M K
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ II ++ N +E L LF + EK + P+E + VL AC L A D G+
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN + V SL+DMY KCG L LF +A K ++++VMI+G MHG G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KEA+++F++M + G+E D++ +V +L ACSH+GLV+EG F+ M+ E +I PTV+HY C
Sbjct: 582 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 641
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD++ R G L +A I++MPI + +W +LL ++HH++++ E A+ +F++ +
Sbjct: 642 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 701
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVL++N+YA A++W V ++R + +GL ++PG S +E+ +V FV+ D S+P
Sbjct: 702 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPET 761
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+NI + ++ ++ EGYSP L D +E EK E L GHS+KLA+A +I G
Sbjct: 762 ENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKI 821
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH K +S + REI++RD RFH+FKDG CSCR +W
Sbjct: 822 IRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 196/379 (51%), Gaps = 8/379 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C K+L++ K+V + GF + S L + ++ G + A +F ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL--SLMYTNCGDLKEASRVFDEVK 156
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
A +N L+ K +F ++ L+ +M GVE D++TF + K+ + L+++ G Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG + K GF V NSL+ Y K ++V+ A +F +M ++ V SW++II + SNGL
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L +F +M + + +VSV + C + LG+ H ++ +
Sbjct: 277 AEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG L+ +FR M+D+ ++Y+ MI+G A G EA+ +F EM EG+ P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D VL+ C+ L++EG + +K E + + ++D+ + G + EA EL
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEA-EL 453
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+ S ++ + W +++
Sbjct: 454 VFSEMRVKDIISWNTIIGG 472
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 160/307 (52%), Gaps = 4/307 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +LK GF ++LVA + +D A +F ++ E +N++I G+V
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQ--RVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
E+ L ++ +M G+E D T ++F CA + + G +H K F +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
N+L++MY KC ++ A A+F++M +SV S++++IA +A GL E +KLF EM E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P+ + +VL+ C LD GK H + N ++ V +L+DMY KCG +++
Sbjct: 393 I-SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSH 346
+F M K ++++ +I G + + EALS+F+ +L E PD+ VL AC+
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 347 AGLVNEG 353
++G
Sbjct: 512 LSAFDKG 518
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 148/329 (44%), Gaps = 33/329 (10%)
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
D NT +R F + E A+ L + ++P T ++ + CA ++LK+G ++ +
Sbjct: 63 DANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFI 120
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
GF D + + L MY C ++ AS +F ++ + W+ ++ A +G +S +
Sbjct: 121 RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF +M + + V + + L ++ G+ HG ++++ V SL+
Sbjct: 181 GLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y+K ++ +F M ++ ++++ +I+G +G ++ LS+F +ML G+E D
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 338 VGVLSACSHAGLVNEGL--------LCF--------------------DRMKLEYRIVP- 368
V V + C+ + L++ G CF D K +R +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 369 -TVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V Y ++ R G+ GEA++L + M
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 31 EQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
E+ +L C +L F K +H ++++ G+F + A++LV A G++ A +
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA--KCGALLLAHML 556
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F I + +I G+ +EA+ L+N+M + G+E D +F +L AC+ +
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 148 KEG 150
EG
Sbjct: 617 DEG 619
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/599 (38%), Positives = 353/599 (58%), Gaps = 34/599 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLV---ATCALSHWGSMDYACSIF 88
++L C +L+ K++HA+ L+ N F S LV C G + + +
Sbjct: 221 SVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLD 280
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQAL 147
R+I +N +I G+ + E+AL L+ EM G+ + T ++ A + + +
Sbjct: 281 RKIGL-----WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGI 335
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
IHG+V K G E + ++QN+LI+MY + ++ + IF M+ + + SW+ II ++
Sbjct: 336 SRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSY 395
Query: 208 ASNGLWSECLKLFGEM-------------NNEK--CWRPEESILVSVLSACTHLGALDLG 252
G S+ L L EM N+EK ++P L++VL C L AL G
Sbjct: 396 VICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKG 455
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
K H IRN+ A V V ++L+DMY KCGCL +F M + +T++V+I MH
Sbjct: 456 KEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMH 515
Query: 313 GQGKEALSIFSEMLREG-----LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
G+GKE+L +F +M+ EG ++P +V ++ + ++CSH+G+V+EGL F +MK E+ I
Sbjct: 516 GKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIE 575
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAK 426
P HY C+VDL+GRAG + EA L+ +MP + V W SLL A +++HN+EIGEIAA+
Sbjct: 576 PAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAE 635
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
NL Q+ S YVLLSN+Y+ A W +R M + G+ + PG S +E +V+KF+
Sbjct: 636 NLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFL 695
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
+ D SHP + +++ + + +LK EGY PD + VL D+DE+EK L GHS+KLAIAF
Sbjct: 696 AGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFG 755
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+++ G+ IR+A+NLR+CNDCHT +K IS I +REII+RD +RFH FKDGTCSC DYW
Sbjct: 756 ILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 123/237 (51%), Gaps = 7/237 (2%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC--DLFVQNSLINMYGKC 179
M G PDNF FPA+ KA A +Q L G QIH HVFK G+ + + N+L+NMYGKC
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+ A +F ++ ++ SW++II+A W +K F M E + P LVS+
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEG-FEPSSFTLVSM 119
Query: 240 LSACTHLGALD---LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
AC++L D LGK HG R +L+ MY K G L+ L + D
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRK-GHWRTFSNNALMAMYAKLGRLDDAKSLLVLFED 178
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ +T++ MIS + + + EAL M+ EG++PD V + VL ACSH L+ G
Sbjct: 179 RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTG 235
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 13/299 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCA--LSHWGSMDYACSIFRQ 90
+LK ++E K++HAHV K+G+ F + + T G + A +F +
Sbjct: 15 AVLKAVAGIQELYLGKQIHAHVFKFGY--GSFSSVTIDNTLVNMYGKCGGLGDAYKVFDR 72
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ---AL 147
I E +N++I + E+E A+ + M G EP +FT ++ AC+ L+ L
Sbjct: 73 ITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGL 132
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G QIHG F+ G F N+L+ MY K +++ A ++ + + + +W+++I++
Sbjct: 133 WLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSF 191
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL- 266
+ N + E L M E +P+ SVL AC+HL L GK H +R +
Sbjct: 192 SQNERFMEALMFLRLMVLEGV-KPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE 250
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N V ++L+DMY CG +E G +F + D+ ++ MI+G A ++AL +F EM
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEM 309
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 174/385 (45%), Gaps = 22/385 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K++H + G W F + L+A A G +D A S+ ++ +N++I F
Sbjct: 136 KQIHGCCFRKGH-WRTFSNNALMAMYA--KLGRLDDAKSLLVLFEDRDLVTWNSMISSFS 192
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC-DL 166
+ F EAL M GV+PD TF ++ AC+ L L+ G +IH + + +
Sbjct: 193 QNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENS 252
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FV ++L++MY C +VE +F + + + W+A+IA +A + + L LF EM
Sbjct: 253 FVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAA 312
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ + S++ A + + HG +I+ N ++ +LIDMY + G ++
Sbjct: 313 AGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKT 372
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-------EG---------L 330
+F M D+ ++++ +I+ + G+ +AL + EM R +G
Sbjct: 373 SKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPF 432
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+P+ + + VL C+ + +G + + V +VD+ + G L A
Sbjct: 433 KPNSITLMTVLPGCASLSALAKGKE-IHAYAIRNLLASQVTVGSALVDMYAKCGCLNLAR 491
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVH 415
+ MPI +N + W ++ A +H
Sbjct: 492 RVFDQMPI-RNVITWNVIIMAYGMH 515
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/591 (39%), Positives = 350/591 (59%), Gaps = 28/591 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L C +LE K++HA+ LK G N F S LV + + S R
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV-----DMYCNCKQVLSGRRVF 361
Query: 92 DEPGAFD-----FNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQ 145
D G FD +N +I G+ + +EAL L+ M E G+ ++ T + AC +
Sbjct: 362 D--GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
A IHG V K G + D FVQN+L++MY + K++ A IF +M+ + + +W+ +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 206 AHASNGLWSECLKLFGEMNN----------EKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ + + L L +M N +P L+++L +C L AL GK
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H I+N A +V V ++L+DMY KCGCL+ +F + K +T++V+I MHG G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EA+ + M+ +G++P++V ++ V +ACSH+G+V+EGL F MK +Y + P+ HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
VVDL+GRAG + EA +L+ MP N W SLL AS++H+NLEIGEIAA+NL Q+ +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
S YVLL+N+Y+ A W ++R M +G+ + PG S +E +V+KFV+ D SHP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
+ + + + +++ EGY PD S VL +V+EDEK L GHS+KLAIAF +++ S G+
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+A+NLR+CNDCH TK IS I +REII+RD +RFHRFK+GTCSC DYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 138/256 (53%), Gaps = 6/256 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+R V+ EA+ Y +M G++PDN+ FPAL KA A LQ ++ G QIH HV+K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 162 FECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
+ D + V N+L+N+Y KC +F ++ +++ SW+++I++ S W L+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLG---ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
M +E P LVSV++AC++L L +GK H +R LN + +L+ M
Sbjct: 188 RCMLDENV-EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAM 245
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y K G L L + +T++ ++S L + Q EAL EM+ EG+EPD+
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 338 VGVLSACSHAGLVNEG 353
VL ACSH ++ G
Sbjct: 306 SSVLPACSHLEMLRTG 321
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 29/404 (7%)
Query: 35 LTILKTCKNLEE------FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
++++ C NL K+VHA+ L+ G N F + LVA +G + S
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAM-----YGKLGKLASSK 256
Query: 89 RQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+ G D +NT++ + + EAL EM GVEPD FT ++ AC+ L+
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 146 ALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
L+ G ++H + K G + + FV ++L++MY C++V +F M + + W+A+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A ++ N E L LF M + + V+ AC GA + HG +++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V+ +L+DMY + G ++ + +F M D+ +T++ MI+G ++AL + +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 325 ML-----------REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
M R L+P+ + + +L +C+ + +G ++ + V
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVG 555
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+VD+ + G L + ++ +P Q+N + W ++ A +H N
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 35/395 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK +L++ K++HAHV K+G+ + +N + G +F +I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRIS 160
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKE 149
E +N+LI ++E AL + M + VEP +FT ++ AC+ L + L
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H + + G E + F+ N+L+ MYGK K+ + + + + +W+ ++++
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNV 268
N E L+ EM E P+E + SVL AC+HL L GK H ++N S N
Sbjct: 280 NEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY C + G +F M D+ ++ MI+G + + KEAL +F M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 329 -GLEPDDVVYVGVLSACSHAG-----------LVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
GL + GV+ AC +G +V GL DR + VQ+ +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL---DRDRF-------VQN--TL 446
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+D+ R G + A+ + M ++ V W ++++
Sbjct: 447 MDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/575 (39%), Positives = 349/575 (60%), Gaps = 6/575 (1%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C +F + +H++ +K G F ++ L+ A +G + +F ++
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA--EFGRLRDCQKVFDRM 308
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N++I+ + + A+ L+ EM ++PD T +L ++L ++
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 152 QIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+ G + G F D+ + N+++ MY K V+ A A+F + V SW+ II+ +A N
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G SE ++++ M E + VSVL AC+ GAL G HG L++N L+V V
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
TSL DMY KCG LE L LF + + ++ +I+ HG G++A+ +F EML EG+
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD + +V +LSACSH+GLV+EG CF+ M+ +Y I P+++HYGC+VD+ GRAG L AL
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I+SM +Q + +W +LLSA +VH N+++G+IA+++LF++ H +VLLSNMYA A
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W V +IR+ KGL ++PG+S +EV KV F + +++HP ++ +Y + ++ +LK
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD VL+DV++DEK L HS++LAIAFALI + IRI +NLR+C DCH+
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I EREIIVRD RFH FK+G CSC DYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 206/412 (50%), Gaps = 13/412 (3%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++LK C+ + + K+H LK+GF W+ + A++L+ S + ++ A +F ++
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHL--YSRYKAVGNARILFDEMPVRD 215
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+N +I G+ + +EAL L N + R + D+ T +L AC + G+ IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGL--RAM--DSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ K G E +LFV N LI++Y + ++ +F +M + + SW++II A+ N
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSL 274
+ LF EM + +P+ L+S+ S + LG + + G +R L ++ + ++
Sbjct: 332 AISLFQEMRLSRI-QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPD 333
+ MY K G ++ +F + + ++++ +ISG A +G EA+ +++ M EG + +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+V VL ACS AG + +G+ R+ L+ + V + D+ G+ G L +AL L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ--INSHHPSDYVLLS 443
+P + N V W +L++ H + E + K + + H + LLS
Sbjct: 510 YQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 24/383 (6%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEP 94
T+ + C NL+ K +HA ++ N ++ LV C L G++ A F I
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL---GNVALARHTFDHIQNR 115
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNE-MFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +N +I G+ + E + ++ M G+ PD TFP++ KAC + + +G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K GF D++V SLI++Y + + V A +F +M + + SW+A+I+ + +G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 214 SECLKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L L + R +S+ +VS+LSACT G + G H I++ + V
Sbjct: 233 KEALTLSNGL------RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LID+Y + G L +F M + ++++ +I ++ Q A+S+F EM ++P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR---IVPTVQHYGCVVDLMGRAGMLGEA 389
D + + + S S G + C R + + VV + + G++ A
Sbjct: 347 DCLTLISLASILSQLGDIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 390 LELIQSMPIQQNDVV-WRSLLSA 411
+ +P DV+ W +++S
Sbjct: 404 RAVFNWLP--NTDVISWNTIISG 424
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 18/296 (6%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
LF+ C LQ+ K +H + ++ + L+N+Y V A F + +
Sbjct: 59 TLFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V +W+ +I+ + G SE ++ F P+ SVL AC + +D G
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--ID-GNKI 172
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H ++ +V V SLI +Y + + LF M + +++ MISG G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 316 KEALSIFSEMLREGLEP-DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
KEAL+ L GL D V V +LSAC+ AG N G + +++ + +
Sbjct: 233 KEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRG-VTIHSYSIKHGLESELFVSN 286
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
++DL G L + ++ M + ++ + W S++ A +++ + A +LFQ
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYV-RDLISWNSIIKAYELNEQ----PLRAISLFQ 337
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/579 (38%), Positives = 346/579 (59%), Gaps = 4/579 (0%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSI 87
+ Q + ++ C +L E ++ A+ +K F A L+ C S SM YA +
Sbjct: 27 VNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHL 85
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + EP FN++ RG+ + E L+ E+ E G+ PDN+TFP+L KACA +AL
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+EG Q+H K+G + +++V +LINMY +CE V+ A +F ++ + V ++A+I +
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGY 205
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A +E L LF EM K +P E L+SVLS+C LG+LDLGK H ++
Sbjct: 206 ARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V T+LIDM+ KCG L+ + +F M K +S MI A HG+ ++++ +F M
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
E ++PD++ ++G+L+ACSH G V EG F +M ++ IVP+++HYG +VDL+ AG L
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLE 384
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A E I +PI ++WR LL+A H+NL++ E ++ +F+++ H DYV+LSN+YA
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
R ++W V +R M + + PG S +EV V++F S D A ++ + +M
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 508 QLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+LK GY PD S V+ ++++ EK L+ HS+KLAI F L++ G+ IR+ +NLR+C
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH KLIS+I+ R+++ RD +RFH F+DG CSC D+W
Sbjct: 565 DCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/592 (38%), Positives = 351/592 (59%), Gaps = 14/592 (2%)
Query: 24 ELNLRLKEQ----ECLTILKTCKNLEEF------KKVHAHVLKWGFFWNPFCASNLVATC 73
EL LR++E+ + +TI+ + + + +H + ++ GF F +
Sbjct: 262 ELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGF--ESFVNVSTALVD 319
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
S GS+ A IF ++ +N++I G+V+ + A+ ++ +M + VE N T
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
ACA L +++G +H + ++ D+ V NSLI+MY KC++V+ A+ IF+ +
Sbjct: 380 VMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQ 439
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
K++ SW+A+I +A NG +E + F +M + +P+ +VSV+ A L L K
Sbjct: 440 HKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI-KPDSFTMVSVIPALAELSVLPQAK 498
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG +IR NV V T+L+DMY KCG + LF MM ++ T++ MI G HG
Sbjct: 499 WIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHG 558
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
GK AL +F +M +E ++P++V ++ VLSACSH+GLV EG F MK +Y + P + HY
Sbjct: 559 LGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHY 618
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
G +VDL+GRA L EA + IQ MPI+ V+ ++L A ++H N+E+GE AA +F ++
Sbjct: 619 GAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDP 678
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
+VLL+N+YA A W VA++RT M KG+ ++PG+S+VE+ +V+ F S SHP
Sbjct: 679 DDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHP 738
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
IY + + ++K GY PD + V DV++ K + L HS+KLAIAF+L++ S G
Sbjct: 739 QAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHSEKLAIAFSLLNTSPG 797
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ I + +NLR+C DCH TK IS++ +REIIVRD +RFH FKDGTCSC DYW
Sbjct: 798 TTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 165/317 (52%), Gaps = 3/317 (0%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ C +++E + ++K G + + LV+ +GS+ A +F+ I++
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSL--FCKFGSLHEAARVFQPIEDKID 140
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
++T+++G+ + ++A+ + M GV P + F L K C L++G +IH
Sbjct: 141 ELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQ 200
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ GF ++F ++NMY KC VE A +F +M ++ + W+ II+ +A NG
Sbjct: 201 LIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTA 260
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L+L M E+ RP+ +VS+L A +G+L +G+ HG +R V V T+L+D
Sbjct: 261 LELVLRM-QEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY KCG + +F M K ++++ MI G +G A+ IF +M+ E +E +V
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVT 379
Query: 337 YVGVLSACSHAGLVNEG 353
+G L AC+ G V +G
Sbjct: 380 VMGALHACADLGDVEQG 396
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 347/589 (58%), Gaps = 34/589 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H HV+K+GF F S LV S G + A +F ++ E +NTLI G +
Sbjct: 163 RQIHGHVVKFGFMSYVFVGSPLVDM--YSKMGMISCARKVFDELPEKNVVMYNTLIMGLM 220
Query: 108 KEVEFEEALFLYNEMFER-------------------------------GVEPDNFTFPA 136
+ E++ L+ EM ER ++ D +TF +
Sbjct: 221 RCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGS 280
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ AC + AL+EG Q+H ++ + ++ ++FV ++L++MY KC+ ++ A A+FK+M K+
Sbjct: 281 VLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKN 340
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+A++ + NG E +K F +M P++ L SV+S+C +L +L+ G H
Sbjct: 341 VVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI-EPDDFTLGSVISSCANLASLEEGAQFH 399
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ + + V +L+ +Y KCG +E LF ++ K ++T++ ++SG A G+
Sbjct: 400 ARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 459
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
E + +F ML GL+PD V ++GVLSACS AGLV +G F+ M E+ IVP HY C+
Sbjct: 460 ETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCM 519
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
+DL RAG + EA I MP + + W +LLS+ + + N++IG+ AA+ L +++ H+
Sbjct: 520 IDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNT 579
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLLS++YA +W +VA++R +M KGL + PG S ++ +V+ F + D+S+P D
Sbjct: 580 ASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSD 639
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
IY + ++ +++ EGY PD++ VL DV + EK + L HS+KLAIAF L+ + G PI
Sbjct: 640 QIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPI 699
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C+DCH TK IS I REI+VRD RFH FKDGTCSC D+W
Sbjct: 700 RVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGDFW 748
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 203/442 (45%), Gaps = 72/442 (16%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C N + K +H+H++K + F +NL+++ A GS+ YAC +F Q+
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYA--KLGSIPYACKVFDQMPH 72
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNF-------------------- 132
P + +NT++ + K E +L++ M R GV ++
Sbjct: 73 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 133 ------------TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK-- 178
TF L +K +K G QIHGHV K GF +FV + L++MY K
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192
Query: 179 -----------------------------CEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
C +VE + +F +M ++ SW+++I
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NGL + + +F EM E + ++ SVL+AC + AL GK H +IR N+
Sbjct: 253 NGLDRDAIDIFREMKLENL-QMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V ++L+DMY KC ++ +F+ M K ++++ M+ G +G +EA+ FS+M + G
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+EPDD V+S+C++ + EG F L ++ + +V L G+ G + ++
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDS 430
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
L + +++V W +L+S
Sbjct: 431 HRLFNEISF-KDEVTWTALVSG 451
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 63/281 (22%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
AL K C + + +H H+ K + F+ N+LI+ Y K + +A +F QM
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEM-------------------------------- 223
++ SW+ I++A++ G SE LF M
Sbjct: 74 NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK--- 280
N+ + ++L + G + LG+ HG +++ V V + L+DMY K
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193
Query: 281 ----------------------------CGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
CG +E LF M ++ ++++ MI+G +
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G ++A+ IF EM E L+ D + VL+AC + EG
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 328/530 (61%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G +D A ++FR++ + + ++I G+ +E EA+ L+ EM E G+ PD +T
Sbjct: 191 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 250
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
A+ CA+ + L EG ++H + + D+FV N+L++MY KC ++ A +F +M K
Sbjct: 251 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 310
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ II ++ N +E L LF + EK + P+E + VL AC L A D G+
Sbjct: 311 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 370
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN + V SL+DMY KCG L LF +A K ++++VMI+G MHG G
Sbjct: 371 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 430
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KEA+++F++M + G+E D++ +V +L ACSH+GLV+EG F+ M+ E +I PTV+HY C
Sbjct: 431 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 490
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD++ R G L +A I++MPI + +W +LL ++HH++++ E A+ +F++ +
Sbjct: 491 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 550
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVL++N+YA A++W V ++R + +GL ++PG S +E+ +V FV+ D S+P
Sbjct: 551 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPET 610
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+NI + ++ ++ EGYSP L D +E EK E L GHS+KLA+A +I G
Sbjct: 611 ENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKI 670
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH K +S + REI++RD RFH+FKDG CSCR +W
Sbjct: 671 IRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 170/324 (52%), Gaps = 3/324 (0%)
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F ++ A +N L+ K +F ++ L+ +M GVE D++TF + K+ + L+++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G Q+HG + K GF V NSL+ Y K ++V+ A +F +M ++ V SW++II +
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
SNGL + L +F +M + + +VSV + C + LG+ H ++ +
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+L+DMY KCG L+ +FR M+D+ ++Y+ MI+G A G EA+ +F EM
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
EG+ PD VL+ C+ L++EG + +K E + + ++D+ + G +
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 388 EALELIQSMPIQQNDVVWRSLLSA 411
EA EL+ S ++ + W +++
Sbjct: 299 EA-ELVFSEMRVKDIISWNTIIGG 321
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 160/307 (52%), Gaps = 4/307 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +LK GF ++LVA + +D A +F ++ E +N++I G+V
Sbjct: 64 EQLHGFILKSGFGERNSVGNSLVAFYLKNQ--RVDSARKVFDEMTERDVISWNSIINGYV 121
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
E+ L ++ +M G+E D T ++F CA + + G +H K F +
Sbjct: 122 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 181
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
N+L++MY KC ++ A A+F++M +SV S++++IA +A GL E +KLF EM E
Sbjct: 182 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 241
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P+ + +VL+ C LD GK H + N ++ V +L+DMY KCG +++
Sbjct: 242 I-SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSH 346
+F M K ++++ +I G + + EALS+F+ +L E PD+ VL AC+
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 347 AGLVNEG 353
++G
Sbjct: 361 LSAFDKG 367
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 31 EQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
E+ +L C +L F K +H ++++ G+F + A++LV A G++ A +
Sbjct: 348 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA--KCGALLLAHML 405
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F I + +I G+ +EA+ L+N+M + G+E D +F +L AC+ +
Sbjct: 406 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 465
Query: 148 KEG 150
EG
Sbjct: 466 DEG 468
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/595 (39%), Positives = 349/595 (58%), Gaps = 36/595 (6%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L C +LE K++HA+ LK G N F S LV D C+ + +
Sbjct: 220 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV-----------DMYCNCKQVL 268
Query: 92 DEPGAFD---------FNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKAC 141
FD +N +I G+ + +EAL L+ M E G+ ++ T + AC
Sbjct: 269 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 328
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ A IHG V K G + D FVQN+L++MY + K++ A IF +M+ + + +W+
Sbjct: 329 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 388
Query: 202 AIIAAHASNGLWSECLKLFGEMNN----------EKCWRPEESILVSVLSACTHLGALDL 251
+I + + + L L +M N +P L+++L +C L AL
Sbjct: 389 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 448
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK H I+N A +V V ++L+DMY KCGCL+ +F + K +T++V+I M
Sbjct: 449 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 508
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
HG G+EA+ + M+ +G++P++V ++ V +ACSH+G+V+EGL F MK +Y + P+
Sbjct: 509 HGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 568
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQ 430
HY CVVDL+GRAG + EA +L+ MP N W SLL AS++H+NLEIGEIAA+NL Q
Sbjct: 569 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 628
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
+ + S YVLL+N+Y+ A W ++R M +G+ + PG S +E +V+KFV+ D
Sbjct: 629 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDS 688
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
SHP + + + + +++ EGY PD S VL +V+EDEK L GHS+KLAIAF +++
Sbjct: 689 SHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNT 748
Query: 551 SQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S G+ IR+A+NLR+CNDCH TK IS I +REII+RD +RFHRFK+GTCSC DYW
Sbjct: 749 SPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 6/236 (2%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD-LFVQNSLINMYGKCE 180
M G++PDN+ FPAL KA A LQ ++ G QIH HV+K G+ D + V N+L+N+Y KC
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+F ++ +++ SW+++I++ S W L+ F M +E P LVSV+
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENV-EPSSFTLVSVV 119
Query: 241 SACTHLG---ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+AC++L L +GK H +R LN + +L+ MY K G L L +
Sbjct: 120 TACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+T++ ++S L + Q EAL EM+ EG+EPD+ VL ACSH ++ G
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 234
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 187/404 (46%), Gaps = 29/404 (7%)
Query: 35 LTILKTCKNLEE------FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
++++ C NL K+VHA+ L+ G N F + LVA +G + S
Sbjct: 116 VSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAM-----YGKLGKLASSK 169
Query: 89 RQIDEPGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+ G D NT++ + + EAL EM GVEPD FT ++ AC+ L+
Sbjct: 170 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 229
Query: 146 ALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
L+ G ++H + K G + + FV ++L++MY C++V +F M + + W+A+I
Sbjct: 230 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 289
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A ++ N E L LF M + + V+ AC GA + HG +++
Sbjct: 290 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 349
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V+ +L+DMY + G ++ + +F M D+ +T++ MI+G ++AL + +
Sbjct: 350 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 409
Query: 325 ML-----------REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
M R L+P+ + + +L +C+ + +G ++ + V
Sbjct: 410 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVG 468
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+VD+ + G L + ++ +P Q+N + W ++ A +H N
Sbjct: 469 SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 35/395 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK +L++ K++HAHV K+G+ + +N + G +F +I
Sbjct: 15 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRIS 73
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKE 149
E +N+LI ++E AL + M + VEP +FT ++ AC+ L + L
Sbjct: 74 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 133
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H + + G E + F+ N+L+ MYGK K+ + + + + +W+ ++++
Sbjct: 134 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 192
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNV 268
N E L+ EM E P+E + SVL AC+HL L GK H ++N S N
Sbjct: 193 NEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 251
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY C + G +F M D+ ++ MI+G + + KEAL +F M
Sbjct: 252 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 311
Query: 329 -GLEPDDVVYVGVLSACSHAG-----------LVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
GL + GV+ AC +G +V GL DR + VQ+ +
Sbjct: 312 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL---DRDRF-------VQN--TL 359
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+D+ R G + A+ + M ++ V W ++++
Sbjct: 360 MDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 393
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/577 (37%), Positives = 348/577 (60%), Gaps = 13/577 (2%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFW-NPFCAS--NLVATCALSHWGSMDYACSIF 88
++IL+ C N + + VH +K W FC + ++ A C G +D A +F
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKC-----GVLDGAILVF 56
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ + +LI + +E +EA+ L++EM GV PD FT + ACA +L+
Sbjct: 57 DLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLE 116
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +H ++ + + ++FV N+L++MY KC +E A+++F +M K + SW+ +I ++
Sbjct: 117 NGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS 176
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N L +E L LFG+M E +P+ + L +L AC L +LD GK HG ++RN +
Sbjct: 177 KNSLPNEALSLFGDMVLE--MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ 234
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +L+DMYVKCG LF M+ K +T++VMI+G MHG G A++ F+EM +
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA 294
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+EPD+V ++ +L ACSH+GL++EG F+ M+ E + P ++HY C+VDL+ R+G L
Sbjct: 295 GIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A + I+SMPI+ + +W +LLS ++HH++++ E A+++F++ + YVLL+N YA
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAE 414
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A++W +V K+R ++ +GL ++PG S +EV KV+ F++ + SHP I ++ ++ +
Sbjct: 415 AEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSK 474
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K EGY P L + D +K L GHS+KLA+AF +++L IR+++NLR+C DC
Sbjct: 475 MKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDC 534
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H K IS REI++RD RFH FKDG C CR +W
Sbjct: 535 HEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 92/176 (52%), Gaps = 2/176 (1%)
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+VS+L AC + G + LG+ HGS ++ +L+DMY KCG L+ + +F +M+
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ +T++ +I+ A G EA+ +F EM REG+ PD VL AC+ G + G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ ++ E + + ++D+ + G + +A + MP+ ++ + W +++
Sbjct: 121 VHNYIR-ENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV-KDIISWNTMIGG 174
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 345/575 (60%), Gaps = 11/575 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVA---TCALSHWGSMDYACSIFRQ 90
++K C L + + +H K + F + L+A C L + +F
Sbjct: 214 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE----EAVKRVFDL 269
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+D +N L+ G+ + + +AL LY +M + G++PD FT +L AC+++++L G
Sbjct: 270 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYG 329
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+IHG + G D F+ SL+++Y C K A +F M+ +S+ SW+ +IA ++ N
Sbjct: 330 EEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQN 389
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL E + LF +M ++ +P E ++ V AC+ L AL LGK H ++ ++ V
Sbjct: 390 GLPDEAINLFRQMLSDGI-QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFV 448
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+S+IDMY K GC+ +F + +K +++V+I+G +HG+GKEAL +F +MLR GL
Sbjct: 449 SSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 508
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PDD + G+L ACSHAGLV +GL F++M + I P ++HY CVVD++GRAG + +AL
Sbjct: 509 KPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDAL 568
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
LI+ MP + +W SLLS+ ++H NL +GE A L ++ P +YVL+SN++A +
Sbjct: 569 RLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSG 628
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W DV ++R M GL + G S +EV KV+ F+ D P + + E ++E ++
Sbjct: 629 KWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKIS 688
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY+PD VL D++E++K L+GHS+KLAI+F L++ ++G P+R+ +NLR+C DCH
Sbjct: 689 SIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHN 748
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + R+I+VRD KRFH F+DG CSC DYW
Sbjct: 749 AAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 783
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 202/388 (52%), Gaps = 15/388 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+L+ C K++E +++H V F N F + + T S GS + +F ++
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIIT-MYSMCGSPSDSRMVFDKLR 168
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQALKEGM 151
F +N ++ + + FE+A+ +++E+ +PDNFT P + KACA L L G
Sbjct: 169 RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 228
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA-SAIFKQMDQKSVASWSAIIAAHASN 210
IHG K+ D+FV N+LI MYGKC VE A +F MD K+V+SW+A++ +A N
Sbjct: 229 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ L L+ +M + P+ + S+L AC+ + +L G+ HG +RN A++ +
Sbjct: 289 SDPRKALDLYLQMTDSGL-DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFI 347
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SL+ +Y+ CG LF M + ++++VMI+G + +G EA+++F +ML +G+
Sbjct: 348 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407
Query: 331 EPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+P ++ + V ACS + G L CF L+ + + ++D+ + G +G
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCF---ALKAHLTEDIFVSSSIIDMYAKGGCIGL 464
Query: 389 ALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ + + ++ DV W +++ +H
Sbjct: 465 SQRIFDRL--REKDVASWNVIIAGYGIH 490
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 228/603 (37%), Positives = 357/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K +E +++H HVLK G + + ++L++
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T + + S Y A +F +I +N +I G+ + ++EAL L+ +M +
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC ++E
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+++ K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACA 378
Query: 245 HLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F + K ++
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ + +FS M + G++PDD+ +VG+LSACSH+G+++ G F M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y++ P ++HYGC++DL+G +G+ EA E+I M ++ + V+W SLL A K+H N+E+GE
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW +VAK R + KG+ + PG S +E+ V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 603 DYW 605
DYW
Sbjct: 739 DYW 741
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 197/374 (52%), Gaps = 38/374 (10%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L +PP ++ L++L CK L+ + +HA ++K G + S L+
Sbjct: 19 FLPSSSDPPYD-----SIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE 73
Query: 72 TCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
C LS H+ + YA S+F+ I EP +NT+ RG + AL LY M G+ P+
Sbjct: 74 FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY---GKCEK------ 181
++TFP + K+CAK +A KEG QIHGHV K+G + DL+V SLI+MY G+ E
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 182 ----------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+E A +F ++ K V SW+A+I+ +A G + E L+L
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F +M RP+ES +V+V+SAC G+++LG+ H + + N+ + +LID+Y
Sbjct: 254 FKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG LE LF + K ++++ +I G KEAL +F EMLR G P+DV +
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 340 VLSACSHAGLVNEG 353
+L AC+H G ++ G
Sbjct: 373 ILPACAHLGAIDIG 386
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 16/237 (6%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N+R E +T++ C ++E ++VH + GF SNL AL S
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF------GSNLKIVNALIDLYSKC 314
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ AC +F ++ +NTLI G+ ++EAL L+ EM G P++ T ++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 139 KACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA L A+ G IH ++ K G ++ SLI+MY KC +E A +F + KS
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++SW+A+I A +G LF M +P++ V +LSAC+H G LDLG+
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-QPDDITFVGLLSACSHSGMLDLGR 490
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 54/364 (14%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN---MYGKCEKVEFASAIFKQM 192
+L C LQ+L+ IH + K+G + + LI + E + +A ++FK +
Sbjct: 38 SLLHNCKTLQSLR---IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+ ++ W+ + HA + LKL+ M + P VL +C A G
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEG 153
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLE---------------------KGLC-- 289
+ HG +++ L++ V TSLI MYV+ G LE KG
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 290 --------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
LF + K ++++ MISG A G KEAL +F +M++ + PD+ V V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 342 SACSHAGLVNEGL---LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
SAC+ +G + G L D ++ ++ ++DL + G L A L + +P
Sbjct: 274 SACAQSGSIELGRQVHLWID----DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ-------R 451
+ DV+ + L H NL + + P+D +LS + A A R
Sbjct: 330 K--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 452 WYDV 455
W V
Sbjct: 388 WIHV 391
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/584 (38%), Positives = 349/584 (59%), Gaps = 7/584 (1%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+++ ++IL C L + +H +V+K G ++ F ++ L+ A +G+++
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYA--KFGNLE 368
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A F+Q+ +N++I + + + A + +M G +PD T +L A
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVA 428
Query: 143 KLQALKEGMQIHGHVFKVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ + K +HG + + G+ D+ + N++++MY K ++ A +F+ + K V SW+
Sbjct: 429 QSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWN 488
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+I +A NGL SE ++++ M K P + VS+L A H+GAL G HG +I+
Sbjct: 489 TLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIK 548
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
L+V V T LID+Y KCG L + LF + + +T++ +IS +HG ++ L +
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EML EG++PD V +V +LSACSH+G V EG CF R+ EY I P+++HYGC+VDL+G
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLG 667
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L A I+ MP+Q + +W +LL A ++H N+E+G+ A+ LF+++S + YVL
Sbjct: 668 RAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVL 727
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA +W V K+R+ +GL ++PG+S +EV RKV F + ++SHP IYE
Sbjct: 728 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEE 787
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + ++K GY PD S VL+DV+EDEK L HS++LAIAF +I SPIRI +N
Sbjct: 788 LRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKN 847
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH TK IS I +REI+VRD RFH FKDG CSC DYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 200/391 (51%), Gaps = 19/391 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C L + +++H K GF WN F A++L+ S +G A S+F +
Sbjct: 224 VLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHM--YSRFGFTGIARSLFDDMPFRDM 281
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I G ++ +AL + +EM G++ + T ++ C +L + M IH +
Sbjct: 282 GSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLY 341
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G E DLFV N+LINMY K +E A F+QM V SW++IIAA+ N
Sbjct: 342 VIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTA 401
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSLI 275
F +M ++P+ LVS+ S + HG ++R + +V++ +++
Sbjct: 402 HGFFVKM-QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVV 460
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PD 333
DMY K G L+ +F ++ K ++++ +I+G A +G EA+ ++ +M+ E E P+
Sbjct: 461 DMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPN 519
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGE 388
+V +L A +H G + +G M++ R++ T H C++D+ G+ G L +
Sbjct: 520 QGTWVSILPAYAHVGALQQG------MRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 573
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A+ L +P Q++ V W +++S +H + E
Sbjct: 574 AMSLFYQVP-QESSVTWNAIISCHGIHGHAE 603
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 177/372 (47%), Gaps = 22/372 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +HA ++ G + F ++ LV A + G + + F QI + + +N++I +V
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYA--NLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193
Query: 108 KEVEFEEALF-LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
F EA+ Y + + PD +TFP + KAC L +G +IH FK+GF+ ++
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNV 250
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FV SLI+MY + A ++F M + + SW+A+I+ NG ++ L + EM E
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ +VS+L C LG + H +I++ ++ V +LI+MY K G LE
Sbjct: 311 GI-KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
F+ M ++++ +I+ + A F +M G +PD +L+ S
Sbjct: 370 ARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPD------LLTLVSL 423
Query: 347 AGLVNEGLLCFDRMKLEYRI------VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
A +V + C + + I + V VVD+ + G+L A ++ + + ++
Sbjct: 424 ASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVK- 482
Query: 401 NDVV-WRSLLSA 411
DV+ W +L++
Sbjct: 483 -DVISWNTLITG 493
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 23/325 (7%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G + + F LF + K K +H + G +F+ L+N+Y V +
Sbjct: 114 GNQNEEIDFNFLFDSSTKTPFAK---CLHALLVVAGKVQSIFISTRLVNLYANLGDVSLS 170
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
F Q+ QK V +W+++I+A+ NG + E + F ++ RP+ VL AC
Sbjct: 171 RCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC-- 228
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
G L G+ H + NV V SLI MY + G LF M + +++ M
Sbjct: 229 -GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 287
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC---FDRMKL 362
ISGL +G +AL + EM EG++ + V V +L C G ++ +L + L
Sbjct: 288 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL 347
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIG 421
E+ + + ++++ + G L +A + Q M I DVV W S+++A + + +
Sbjct: 348 EFDLFVS----NALINMYAKFGNLEDARKAFQQMFI--TDVVSWNSIIAAYEQNDD---- 397
Query: 422 EIAAKNLF---QINSHHPSDYVLLS 443
+ A F Q+N P L+S
Sbjct: 398 PVTAHGFFVKMQLNGFQPDLLTLVS 422
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/575 (38%), Positives = 337/575 (58%), Gaps = 10/575 (1%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL+TC + L+ +++H V+K GF +N + S L+ A G +D A I R +
Sbjct: 420 SILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA--KHGKLDTAHVILRTLT 477
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + LI G+ + F EAL + EM RG++ DN F + ACA +QAL +G Q
Sbjct: 478 EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQ 537
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH + G+ DL + N+L+++Y +C +++ A F+++D K SW+ +I+ A +G
Sbjct: 538 IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGY 597
Query: 213 WSECLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ LK+F +MN K E S S +SA ++ + GK H +I+ ++ V
Sbjct: 598 CEDALKVFAQMNRAKL---EASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEV 654
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LI Y KCG +E F M +K ++++ MI+G + HG G EA+++F +M + G
Sbjct: 655 SNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGE 714
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+ V +VGVLSACSH GLV +GL F+ M E+ +VP HY CVVDL+ RAG L A
Sbjct: 715 MPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRAR 774
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I+ MPI+ + +WR+LLSA VH N+E+GE AA++L ++ + YVLLSNMYA +
Sbjct: 775 KFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSG 834
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W + R M ++G+ + PG S +EV V+ F DR HP D IYE + ++ +
Sbjct: 835 KWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAA 894
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY D +L DV++++K + HS+KLAI F L+ LS PI + +NLR+C DCH+
Sbjct: 895 EIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHS 954
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ K +S I R IIVRD RFH F+ G CSC+DYW
Sbjct: 955 WIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C ++ F +++HA V K+G + + LV S + A +F ++
Sbjct: 218 SVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTL--YSRMPNFVSAEKVFSKMQ 275
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
FN+LI G ++ + AL L+ +M ++PD T +L ACA AL +G Q
Sbjct: 276 SKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ 335
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H +V K G D+ V+ +L+++Y C ++ A +F ++V W+ ++ A
Sbjct: 336 LHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDN 395
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
SE ++F +M K P + S+L CT +GALDLG+ H +I+ NV V +
Sbjct: 396 LSESFRIFRQM-QIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ + R + + ++++ +ISG A H EAL F EML G++
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQS 514
Query: 333 DDVVYVGVLSACSHAGLVNEG 353
D++ + +SAC+ +N+G
Sbjct: 515 DNIGFSSAISACAGIQALNQG 535
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 199/393 (50%), Gaps = 19/393 (4%)
Query: 33 ECLTI---LKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHWGSMD 82
+C+T+ L C + L + +++H++V+K G +S+++ AL + +
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGI------SSDMIVEGALLDLYVNCSDIK 366
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F +N ++ F K E+ ++ +M +G+ P+ FT+P++ + C
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ AL G QIH V K GF+ +++V + LI+MY K K++ A I + + + V SW+A
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTA 486
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ +A + L++E LK F EM N + + + S +SAC + AL+ G+ H +
Sbjct: 487 LISGYAQHNLFAEALKHFKEMLN-RGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ ++ + +L+ +Y +CG +++ F + K ++++ +ISG A G ++AL +F
Sbjct: 546 GYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVF 605
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
++M R LE + +SA ++ + +G M ++ ++ ++ +
Sbjct: 606 AQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ-IHAMIIKRGFDSDIEVSNALITFYAK 664
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G + +A MP ++NDV W ++++ H
Sbjct: 665 CGSIEDARREFCEMP-EKNDVSWNAMITGYSQH 696
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 196/405 (48%), Gaps = 22/405 (5%)
Query: 24 ELNLRLKEQECLTILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
E N+ E ++L+ C + +++HA ++ G +P ++ L+ A + G
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKN--G 161
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ A +F + + + +I GF + EEA+ L+ EM G+ P + F ++
Sbjct: 162 LIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLS 221
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C K++ G Q+H VFK G + +V N+L+ +Y + A +F +M K S
Sbjct: 222 GCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVS 281
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
++++I+ A G L+LF +M + +P+ + S+LSAC GAL G+ H +
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDY-LKPDCVTVASLLSACASNGALCKGEQLHSYV 340
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+ + ++IVE +L+D+YV C ++ +F + + ++VM+ E+
Sbjct: 341 IKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESF 400
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC- 375
IF +M +GL P+ Y +L C+ G ++ G ++ +++ T Y C
Sbjct: 401 RIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG------EQIHTQVIKTGFQFNVYVCS 454
Query: 376 -VVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNL 418
++D+ + G L A +++++ ++DVV W +L+S HNL
Sbjct: 455 VLIDMYAKHGKLDTAHVILRTLT--EDDVVSWTALISG-YAQHNL 496
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 244/566 (43%), Gaps = 63/566 (11%)
Query: 32 QECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
Q + +L C N L E KK+H +LK GF + LV G +D +F
Sbjct: 11 QTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDV--YFALGDLDGVVKVF 68
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ-AL 147
+ ++ +I GF+++ L L++ M E V P +F ++ +AC+ + +
Sbjct: 69 EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ QIH + G C + N LI +Y K + A +F + K SW A+I+
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGF 188
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ NG E + LF EM+ + P + SVLS CT + D+G+ H + + S+L
Sbjct: 189 SQNGYEEEAIHLFCEMHTAGIF-PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +L+ +Y + +F M K +++++ +ISGLA G AL +F++M R
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307
Query: 328 EGLEPDDVVYVGVLSACSHAG--------------------LVNEGLL------CFDRMK 361
+ L+PD V +LSAC+ G ++ EG L C D +K
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSD-IK 366
Query: 362 LEYRIVPTVQHYGCVV-DLM----GRAGMLGEALELIQSMPIQ---QNDVVWRSLLSASK 413
+ + T Q V+ ++M G+ L E+ + + M I+ N + S+L
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426
Query: 414 VHHNLEIGE----IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
L++GE K FQ N + S +L +MYA+ + D A + ++
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCS---VLIDMYAKHGK-LDTAHVILRTLTED--- 479
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS-----QVLRD 524
+V + + + A + EM+++ Q G+S IS Q L
Sbjct: 480 ----DVVSWTALISGYAQHNLFAEALKHFKEMLNR-GIQSDNIGFSSAISACAGIQALNQ 534
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHL 550
+ + + G+S+ L+I AL+ L
Sbjct: 535 GRQIHAQSYVSGYSEDLSIGNALVSL 560
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 8/293 (2%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M RG+ + T+ L C +L E ++HG + K+GF + + N L+++Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
++ +F+ M +SV SW II+ + + L LF M E P E SVL
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENV-SPTEISFASVLR 119
Query: 242 ACT-HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
AC+ H + + H +I + + I+ LI +Y K G + +F + K +
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV 179
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
++ MISG + +G +EA+ +F EM G+ P V+ VLS C+ L + G
Sbjct: 180 SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGE---QLH 236
Query: 361 KLEYRIVPTVQHYGC--VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
L ++ +++ Y C +V L R A ++ M +++V + SL+S
Sbjct: 237 ALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ-SKDEVSFNSLISG 288
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 330/574 (57%), Gaps = 6/574 (1%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L+IL C E K VHA + G + A+ L+ GS++ A +F ++
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRM--YMGCGSIEGARRVFDKM 324
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +IRG+ + E+A L+ M E G++PD T+ + ACA L
Sbjct: 325 KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAR 384
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH V + GF DL V +L++MY KC ++ A +F M ++ V SWSA+I A+ NG
Sbjct: 385 EIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENG 444
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + F M P+ +++L+AC HLGALDLG + I+ ++ V
Sbjct: 445 CGEEAFETFHLMKRNNV-EPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG 503
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI+M VK G +E+ +F M + +T++VMI G ++HG +EAL +F ML+E
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ V +VGVLSACS AG V EG F + IVPT++ YGC+VDL+GRAG L EA
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAEL 623
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI MP++ N +W +LL+A +++ NL++ E AA+ + + YV LS+MYA A
Sbjct: 624 LINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGM 683
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W +VAK+R M S+G+ + G + +EV K++ FV +DRSHP IY + ++ +K
Sbjct: 684 WENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKR 743
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY P VL +V E EK E + HS+KLAIA+ ++ L G+PIRI +NLR+C DCH+
Sbjct: 744 EGYIPVTQNVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSA 803
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+K IS + REII RD RFH FK+G CSC DYW
Sbjct: 804 SKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 202/406 (49%), Gaps = 12/406 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L +L C + L+ K+ HA V+K GF + + LV+ GSMD A +F +
Sbjct: 166 LIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKG--GSMDGARQVFDGL 223
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ FN +I G+ K + E+A L+ M + G +P+ +F ++ C+ +AL G
Sbjct: 224 YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGK 283
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H G D+ V +LI MY C +E A +F +M + V SW+ +I +A N
Sbjct: 284 AVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENS 343
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ LF M E +P+ + +++AC L L + H ++R +++V+
Sbjct: 344 NIEDAFGLFATMQEEGI-QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVD 402
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+ MY KCG ++ +F M+ + +++S MI +G G+EA F M R +E
Sbjct: 403 TALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVE 462
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V Y+ +L+AC H G ++ G+ + + ++ +V + ++++ + G + A
Sbjct: 463 PDVVTYINLLNACGHLGALDLGMEIYTQ-AIKADLVSHIPVGNALINMNVKHGSIERARY 521
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHN----LEIGEIAAKNLFQINS 433
+ ++M +Q++ V W ++ +H N L++ + K F+ NS
Sbjct: 522 IFENM-VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNS 566
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 182/373 (48%), Gaps = 23/373 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+V H+++ G N + + L+ ++ G+M A F ++ +N +I G+
Sbjct: 81 KQVRDHIIQSGRQLNIYELNTLIKLHSIC--GNMLEARQTFDSVENKTVVTWNAIIAGYA 138
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +EA L+ +M + +EP TF + AC+ LK G + H V KVGF D
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFR 198
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ +L++MY K ++ A +F + ++ V++++ +I +A +G + +LF M E
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEG 258
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++P +S+L C+ AL GK H + +V V T+LI MY+ CG +E
Sbjct: 259 -FKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGA 317
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M + ++++VMI G A + ++A +F+ M EG++PD + Y+ +++AC+ +
Sbjct: 318 RRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASS 377
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM---------GRAGMLGEALELIQSMPI 398
+ L I V G DL+ + G + +A ++ +M
Sbjct: 378 A----------DLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS- 426
Query: 399 QQNDVVWRSLLSA 411
+++ V W +++ A
Sbjct: 427 RRDVVSWSAMIGA 439
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 121/237 (51%), Gaps = 12/237 (5%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D+ T+ LF+ C L+ G Q+ H+ + G + +++ N+LI ++ C + A F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
++ K+V +W+AIIA +A G E LF +M +E P + VL AC+ L
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE-AMEPSIITFLIVLDACSSPAGL 178
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
LGK H +I+ + + T+L+ MYVK G ++ +F + + T++VMI G
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGLL 355
A G G++A +F M +EG +P+ + ++ +L CS HA +N GL+
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLV 295
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/586 (39%), Positives = 351/586 (59%), Gaps = 21/586 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLK--WGFFWNPFCASNLVATC------ALSHWGSMDYACS 86
L L C +L ++HA +K G +P + L+ C A +H + YA
Sbjct: 32 LAYLPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAH---LAYARQ 88
Query: 87 IFRQIDEPGAFD-FNTLIRGFVKEVEFEEALF----LYNEMFERGVEPDNFTFPALFKAC 141
+F +I PG +NTL+RG+ + ++ M E GV PD +TF +L KAC
Sbjct: 89 VFDRIPHPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKAC 148
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A +A +EG Q HG K G +V +LINMY +C V A +F +MD + V S++
Sbjct: 149 ASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYN 208
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+I A + L E L LF EM K +P L+SVLSAC LGAL+LG+ H IR
Sbjct: 209 AMITASVRSSLPGEALVLFREMQ-AKGLKPTSVTLISVLSACALLGALELGRWIH-DYIR 266
Query: 262 NISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ +++ V T+LIDMY KCG LE + +F+ M + + +SVM+ A HG G+EA+S
Sbjct: 267 KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAIS 326
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM ++G++PDDV ++GVL ACSH+G+V+EGL FD M+ EY IV ++HYGCV DL+
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLL 385
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
R+G L A + I +PI+ ++WR+LLSA H ++++G+ + + +++ H DYV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
+ SN+ A RW ++ +R M+ KG+ + PG S +E+ V++F + D SHP
Sbjct: 446 IFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARR 505
Query: 501 MIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
M+ ++ QLK GY P+ S V ++ E+EK L+ HS+KLAI+F L++ + G+ +RI
Sbjct: 506 MVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIV 565
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ KL+S+++ R II+RD RFH F+DG CSC DYW
Sbjct: 566 KNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/586 (39%), Positives = 351/586 (59%), Gaps = 21/586 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLK--WGFFWNPFCASNLVATC------ALSHWGSMDYACS 86
L L C +L ++HA +K G +P + L+ C A +H + YA
Sbjct: 32 LAYLPHCTSLRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAH---LAYARQ 88
Query: 87 IFRQIDEPG-AFDFNTLIRGFVKEVEFEEALF----LYNEMFERGVEPDNFTFPALFKAC 141
+F +I PG +NTL+RG+ + ++ M E GV PD +TF +L KAC
Sbjct: 89 VFDRIPHPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMMEEGVAPDTYTFVSLLKAC 148
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A +A +EG Q HG K G +V +LINMY +C V A +F +MD + V S++
Sbjct: 149 ASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYN 208
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+I A + L E L LF EM K +P L+SVLSAC LGAL+LG+ H IR
Sbjct: 209 AMITASVRSSLPGEALVLFREMQ-AKGLKPTSVTLISVLSACALLGALELGRWIH-DYIR 266
Query: 262 NISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ +++ V T+LIDMY KCG LE + +F+ M + + +SVM+ A HG G+EA+S
Sbjct: 267 KMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAIS 326
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM ++G++PDDV ++GVL ACSH+G+V+EGL FD M+ EY IV ++HYGCV DL+
Sbjct: 327 MFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVSGIKHYGCVTDLL 385
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
R+G L A + I +PI+ ++WR+LLSA H ++++G+ + + +++ H DYV
Sbjct: 386 ARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYV 445
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
+ SN+ A RW ++ +R M+ KG+ + PG S +E+ V++F + D SHP
Sbjct: 446 IFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARR 505
Query: 501 MIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
M+ ++ QLK GY P+ S V ++ E+EK L+ HS+KLAI+F L++ + G+ +RI
Sbjct: 506 MVDEVIEQLKLVGYVPNTSHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIV 565
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ KL+S+++ R II+RD RFH F+DG CSC DYW
Sbjct: 566 KNLRVCPDCHSMAKLVSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 611
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/617 (37%), Positives = 353/617 (57%), Gaps = 35/617 (5%)
Query: 21 KGPELNLRLKEQECLTILKTCKNLEEF-KKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
K +NL + IL + + + +++H + K+G+ F S LV A + G
Sbjct: 130 KDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT--G 187
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRG-----FVKEVE----------------------- 111
++ A IF +I E +NT+I G F+ E E
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 112 ---FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
F+EA+ + EM G D FTF ++ AC AL EG QIH ++ + ++ ++FV
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
++L++MY KC V++A A+F++M K+V SW+A++ + NG E +++F +M +
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P++ L SV+S+C +L +L+ G HG + + V V +LI +Y KCG LE
Sbjct: 368 -HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAH 426
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
LF M + +++++ ++SG A G+ E +S+F ML G+ PD V +VGVLSACS AG
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV +G F+ M E+RI P HY C++DL+ RAG L EA I MP + + W +L
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
LS+ +++ NLEIG+ AA++L ++ +P+ Y+LLS++YA +W DVAK+R M G+
Sbjct: 547 LSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S ++ KV+ F + DRS P D IY + + ++ EGY PD+S VL DV++
Sbjct: 607 KEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKS 666
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK + L HS+KLAIAF L+ + G IR+ +NLR+C DCH TK IS I +REI+VRD
Sbjct: 667 EKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDA 726
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH FKDG CSC D+W
Sbjct: 727 VRFHLFKDGVCSCGDFW 743
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 202/442 (45%), Gaps = 75/442 (16%)
Query: 38 LKTC---KNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQID 92
LK C +N + KK+H +++ NP F +NL+ T G + A ++F I
Sbjct: 12 LKFCCEARNRAQVKKLHCRIIRT--LTNPETFLYNNLINT--YGKLGDLKNARNVFDHIP 67
Query: 93 EPGAFDFNTLIR-----GFVKEVE--------------------------FEEALFLYNE 121
+P F +NTL+ G++++++ E++ +YN
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 122 MFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M + G V + TF + + + G QIHG +FK G++ LFV + L++MY K
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 181 KVEFASAIFKQMDQKSVA-------------------------------SWSAIIAAHAS 209
+ A+ IF+++ +K++ SW+ II
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NGL+ E + F EM E + ++ SVL+AC ALD GK H +IR N+
Sbjct: 248 NGLFKEAVDKFKEMGIEG-FCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIF 306
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V ++L+DMY KC ++ +FR M K ++++ M+ G +G +EA+ IF +M R
Sbjct: 307 VGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PDD V+S+C++ + EG F L ++ V ++ L G+ G L A
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQ-FHGQALASGLICFVTVSNALITLYGKCGSLEHA 425
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
+L M I +++V W +L+S
Sbjct: 426 HQLFHEMKI-RDEVSWTALVSG 446
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 62/282 (21%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ A K C + + + ++H + + + F+ N+LIN YGK ++ A +F +
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 194 QKS-------------------------------VASWSAIIAAHASNGLWSECLKLFGE 222
Q + V SW+++++ +A NGL SE ++++
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M + ++L ++ G +DLG+ HG + + + V + L+DMY K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 283 CL-----------EKGLC--------------------LFRMMADKCQLTYSVMISGLAM 311
+ EK + LF M +K ++++ +I+GL
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+G KEA+ F EM EG D + VL+AC ++EG
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEG 289
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/623 (38%), Positives = 363/623 (58%), Gaps = 33/623 (5%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
M+ + +LH QP P + L++ +TC ++ + K++HA L+ +
Sbjct: 1 MSISLLLHPLSPHIQPANSPSASTAGNH--HRRILSLAETCSDMSQLKQLHAFTLRTTYP 58
Query: 61 WNP---FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEF-EEAL 116
P F ++ S + ++YA +F I+ +F +NTLIR +V EEA
Sbjct: 59 DEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAF 116
Query: 117 FLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM 175
LY +M ERG PD TFP + KACA + L EG Q+H + K GF D++V N LI+
Sbjct: 117 MLYRKMLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVKHGFSGDVYVNNGLIHF 176
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
YG C ++ A +F +M ++S+ SW+++I A G + L+LF +M +K + P+
Sbjct: 177 YGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDM--QKSFEPDGYT 234
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNIS---ALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+ SVLSAC LG+L LG +H L+RN A++V+++ SLI+MY KCG L +F+
Sbjct: 235 MQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQ 294
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEPDDVVYVGVLSACSHAGLV 350
M +++ MI G A HG+ +EA++ F M++EG ++P+ V +V +L AC+H G+V
Sbjct: 295 GMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMV 354
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
N+G FD M EY I P ++HYGC++DL+ RAG + EA++++ SMP++ + V+WRSLL
Sbjct: 355 NKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLD 414
Query: 411 AS-KVHHNLEIGEIAAKNLFQI-------NSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
A K ++E+ E A+N+ NS+ YVLLS +YA A RW DV +R M
Sbjct: 415 ACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLM 474
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
+ G+ + PG S +E+ +F + D SHP IY+ + ++ +L+ ++
Sbjct: 475 SDHGIRKEPGCSSIEINGISNEFFAGDTSHPQTKQIYQQLKVIDDRLR---------SIV 525
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
++ K L+ HS++LAIAF LI L +PIRI +NLR+C+DCH TKLIS ++ E
Sbjct: 526 DATNDSSKEYSLRLHSERLAIAFGLISLPPQTPIRIFKNLRVCSDCHEVTKLISKVFNTE 585
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRDR RFH FKDG+CSC DYW
Sbjct: 586 IIVRDRVRFHHFKDGSCSCLDYW 608
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/613 (37%), Positives = 351/613 (57%), Gaps = 38/613 (6%)
Query: 27 LRLKEQECLTIL-KTCKNLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYA 84
RL E L +L ++++E ++HA +L+ +P + NL A + G + ++
Sbjct: 24 FRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHS 83
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++F Q +P F F I ++A LY ++ + P+ FTF +L K+C+
Sbjct: 84 LALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST- 142
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE------------------------ 180
K G IH HV K G D +V L+++Y K
Sbjct: 143 ---KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMI 199
Query: 181 -------KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
VE A A+F M ++ + SW+ +I +A +G ++ L LF ++ E +P+E
Sbjct: 200 TCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+V+ LSAC+ +GAL+ G+ H + + LNV V T LIDMY KCG LE+ + +F
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNE 352
K + ++ MI+G AMHG ++AL +F+EM GL+P D+ ++G L AC+HAGLVNE
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G+ F+ M EY I P ++HYGC+V L+GRAG L A E I++M + + V+W S+L +
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
K+H + +G+ A+ L +N + YVLLSN+YA + VAK+R M KG+ + PG
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S +E+ KV++F + DR H IY M+ ++ ++K GY P+ + VL+D++E EK +
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQ 559
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L+ HS++LAIA+ LI GSP++I +NLR+C+DCHT TKLIS I R+I++RDR RFH
Sbjct: 560 SLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 593 RFKDGTCSCRDYW 605
F DG+CSC D+W
Sbjct: 620 HFTDGSCSCGDFW 632
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/506 (41%), Positives = 325/506 (64%), Gaps = 1/506 (0%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N++IR ++ + +L+++ M + + PD+ TFPA+ KA A+L G IHG V +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+GF CD++ +L+++Y C + AS +F +M +++ +W+A+I + N + + +
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F M + +P E +V VLSAC+HLGA + GK H + N LNV V T+LIDMY
Sbjct: 178 FRGMLADGA-QPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG + + +F + +K T++V+ISG AM+GQG AL FS ML E +PD+V ++G
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
VL AC H GLV EG F MK ++ + P ++HYGC+VDL+GRAG+L EALELIQSM I+
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ ++WR+LL A +VH N ++GE K L ++ ++ +YVLLSN+Y+R +RW +V K+R
Sbjct: 357 PDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLR 416
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M+ +G+ + PG S +E+ VY+FV+ + P ++ IY+ + + +LK GY
Sbjct: 417 GMMSLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTD 476
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
L D++++EK + HS+KLA+AF L++ +RI +NLR+C DCH + K++S++Y
Sbjct: 477 MALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVY 536
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+R I+VRDR RFH F +G CSCRDYW
Sbjct: 537 KRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 13/292 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
K +H V++ GF + + ++ LV TC S+ A +F ++ E A +N LI
Sbjct: 109 KMIHGIVIQMGFICDVYTSTALVHLYCTCL-----SISDASQLFDEMPERNAVTWNALIT 163
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+ +F +A+ + M G +P T + AC+ L A +G IH ++
Sbjct: 164 GYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRL 223
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++FV +LI+MY KC V +F+++ +K+V +W+ +I+ +A NG L+ F M
Sbjct: 224 NVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRML 283
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCGC 283
E ++P+E + VL AC H G + G+ S+ + I ++D+ + G
Sbjct: 284 MEN-FKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGL 342
Query: 284 LEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
LE+ L L + M+ + + + ++ +HG K I ++ LEP++
Sbjct: 343 LEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPNN 392
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 228/573 (39%), Positives = 346/573 (60%), Gaps = 7/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L++C K LE K++HA + + G +N A+ LV ++ + S+ A +F +I
Sbjct: 63 SLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCN--SLRNAHHLFDKIP 120
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ F +N LIR + E A+ LY++M E G++PDNFT P + KAC+ L + EG
Sbjct: 121 KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRV 180
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH V + G+E D+FV +L++MY KC V A +F ++ + W++++AA+A NG
Sbjct: 181 IHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGH 240
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L L EM K RP E+ LV+V+S+ + L G+ HG R+ N V+T
Sbjct: 241 PDESLSLCCEMA-AKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKT 299
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LIDMY KCG ++ LF + +K ++++ +I+G AMHG EAL +F M++E +P
Sbjct: 300 ALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QP 358
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +VG L+ACS L++EG ++ M + RI PTV+HY C+VDL+G G L EA +L
Sbjct: 359 DHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDL 418
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ M + + VW +LL++ K H N+E+ E+A + L ++ +YV+L+NMYA++ +W
Sbjct: 419 IRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQSGKW 478
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
VA++R M KG+ ++ S +EV KVY F+S D SHP IY + ++E ++
Sbjct: 479 EGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGLMREA 538
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD V DV+EDEK + + HS++LAIAF LI G+ + I +NLR+C DCH
Sbjct: 539 GYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDCHVAI 598
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I EREI VRD R+H F+ G CSC DYW
Sbjct: 599 KFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 119/226 (52%), Gaps = 2/226 (0%)
Query: 129 PDN-FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P N + + +L ++C +AL+ G Q+H + ++G +L + L+N Y C + A
Sbjct: 55 PSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F ++ + ++ W+ +I A+A NG + L+ +M E +P+ L VL AC+ L
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQM-LEYGLKPDNFTLPFVLKACSALS 173
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+ G+ H +IR+ +V V +L+DMY KCGC+ +F + D+ + ++ M++
Sbjct: 174 TIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLA 233
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
A +G E+LS+ EM +G+ P + V V+S+ + + G
Sbjct: 234 AYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHG 279
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/587 (39%), Positives = 352/587 (59%), Gaps = 20/587 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFF-WNPFCASNLVAT-CALSHWGSMDYACSIFRQ 90
++L C +LE K++HA+ LK G N F S LV C S C +F
Sbjct: 303 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS---GCRVFDG 359
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKE 149
+ + +N +I G+ + EEAL L+ EM E G+ ++ T + AC + A +
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
IHG V K G + D FVQN+L++MY + K++ A IF +M+ + + +W+ II +
Sbjct: 420 KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVF 479
Query: 210 NGLWSECLKLFGEMN------NEKCWR----PEESILVSVLSACTHLGALDLGKCTHGSL 259
+ + L + +M +E+ R P L+++L +C L AL GK H
Sbjct: 480 SERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+N A +V V ++L+DMY KCGCL+ +F + + +T++V++ MHG ++A+
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAI 599
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+ M+ +G++P++V ++ V +ACSH+G+VNEGL F MK +Y + P+ HY CVVDL
Sbjct: 600 DMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDL 659
Query: 380 MGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
+GRAG + EA +LI +P + W SLL A ++H+NLEIGEIAA+NL Q+ + S
Sbjct: 660 LGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASH 719
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLL+N+Y+ A WY ++R M ++G+ + PG S +E +V+KFV+ D SHP + +
Sbjct: 720 YVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 779
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ + +++ EGY PD S VL +V+EDEK L GHS+KLAIAF +++ S G+ IR+
Sbjct: 780 RGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 839
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
A+NLR+CNDCH TK IS + +REII+RD +RFH FK+GTCSC DYW
Sbjct: 840 AKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 133/256 (51%), Gaps = 6/256 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+R V+ EA+ Y +M G++PDNF FPAL KA A LQ + G QIH HV+K G
Sbjct: 64 LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123
Query: 162 FECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
+ D + V N+L+N+Y KC +F ++ +++ SW+++I++ S W L+ F
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLG---ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
M +E P LVSV AC++ L +GK H +R LN + +L+ M
Sbjct: 184 RCMLDEDV-EPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRK-GELNSFIINTLVAM 241
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y K G L L + +T++ ++S L + Q EAL EM+ EG+EPD
Sbjct: 242 YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301
Query: 338 VGVLSACSHAGLVNEG 353
VL ACSH ++ G
Sbjct: 302 SSVLPACSHLEMLRTG 317
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 180/382 (47%), Gaps = 17/382 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VHA+ L+ G N F + LVA G + + + + +NT++
Sbjct: 218 KQVHAYGLRKGEL-NSFIINTLVAM--YGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLC 274
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG-FECDL 166
+ +F EAL EM GVEPD FT ++ AC+ L+ L+ G ++H + K G + +
Sbjct: 275 QNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 334
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FV ++L++MY C++V +F M + + W+A+I +A N E L LF EM
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ + V+ AC GA + HG +++ + V+ +L+DMY + G ++
Sbjct: 395 AGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDI 454
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML-----------REGLEPDDV 335
+F M D+ +T++ +I+G + ++AL + +M R L+P+ +
Sbjct: 455 AKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSI 514
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+ +L +C+ + +G ++ + V +VD+ + G L + ++
Sbjct: 515 TLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 573
Query: 396 MPIQQNDVVWRSLLSASKVHHN 417
+PI +N + W ++ A +H N
Sbjct: 574 IPI-RNVITWNVIVMAYGMHGN 594
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 11/321 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK +L++ K++HAHV K+G+ + +N + G +F +I
Sbjct: 98 ALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRIS 156
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKE 149
E +N+LI ++E AL + M + VEP +FT ++ AC+ + L
Sbjct: 157 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLM 216
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H + + G E + F+ N+L+ MYGK K+ + + + + + +W+ ++++
Sbjct: 217 GKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQ 275
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNV 268
N + E L+ EM E P+ + SVL AC+HL L GK H ++N S N
Sbjct: 276 NEQFLEALEYLREMVLEGV-EPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 334
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY C + G +F M D+ ++ MI+G A + +EAL +F EM
Sbjct: 335 FVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEES 394
Query: 329 -GLEPDDVVYVGVLSACSHAG 348
GL + GV+ AC +G
Sbjct: 395 AGLLANSTTMAGVVPACVRSG 415
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/570 (38%), Positives = 341/570 (59%), Gaps = 6/570 (1%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C ++ +H HVLK G + F ++ L+ S +G + A +F Q++
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINM--YSKFGRLQDAQMVFDQME 284
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I + + + AL + M G+ PD T +L ++L +
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 153 IHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
I G V + + D+ + N+L+NMY K + A +F Q+ +K SW+ ++ + NG
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNG 404
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L SE + + M + P + VS++ A +H+GAL G H LI+N L+V V
Sbjct: 405 LASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA 464
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T LID+Y KCG LE + LF + + ++ +I+ L +HG+G+EAL +F +ML E ++
Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVK 524
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D + +V +LSACSH+GLV+EG CFD M+ EY I P+++HYGC+VDL+GRAG L +A E
Sbjct: 525 ADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYE 584
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
L+++MPIQ + +W +LLSA K++ N E+G +A+ L +++S + YVLLSN+YA ++
Sbjct: 585 LVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEK 644
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W V K+R+ +GL ++PG+S V V K F + +++HP + IY+ + + ++K
Sbjct: 645 WEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKS 704
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD S V +D++EDEK + L HS++LAIAF +I SPIRI +NLR+C DCH
Sbjct: 705 LGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNA 764
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
TK IS I EREI+VRD RFH FKDG CSC
Sbjct: 765 TKYISRISEREIVVRDSNRFHHFKDGICSC 794
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 198/387 (51%), Gaps = 19/387 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
ILK C +L + KKVH V K GF + F A++LV S +G +D A +F +
Sbjct: 130 ILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHL--YSRYGVLDVAHKVFVDMPVKDV 187
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I GF + AL + N M GV+ D T ++ CA+ + G+ IH H
Sbjct: 188 GSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLH 247
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G + D+FV N+LINMY K +++ A +F QM+ + + SW++IIAA+ N S
Sbjct: 248 VLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTA 307
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLI 275
L+ F M RP+ +VS+ S + L + + G +IR +V++ +L+
Sbjct: 308 LRFFKGMQLGGI-RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM--LREGLEPD 333
+MY K G + +F + K ++++ +++G +G EA+ ++ M R+ + P+
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PN 425
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGE 388
+V ++ A SH G + +G MK+ +++ + C++DL G+ G L +
Sbjct: 426 QGTWVSIIPAYSHVGALQQG------MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A+ L +P + V W +++++ +H
Sbjct: 480 AMSLFYEIP-RDTSVPWNAIIASLGIH 505
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 190/390 (48%), Gaps = 19/390 (4%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K+ + + +C N+ KK+HA +L +G N ++ L+ ++H G + + S F
Sbjct: 21 KDADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLI-NLYVTH-GDISLSRSTFD 78
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER----GVEPDNFTFPALFKACAKLQ 145
I + F +N++I +V+ ++ EA+ N++F + PD +TFP + KAC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV--- 135
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+L +G ++H VFK+GFE D+FV SL+++Y + ++ A +F M K V SW+A+I+
Sbjct: 136 SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
NG + L + M E + + + S+L C + G H ++++
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGV-KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+V V +LI+MY K G L+ +F M + ++++ +I+ + AL F M
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM 314
Query: 326 LREGLEPDDVVYVGVLSACSHAG--LVNEGLLCF--DRMKLEYRIVPTVQHYGCVVDLMG 381
G+ PD + V + S S ++ +L F R L+ +V +V++
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG----NALVNMYA 370
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G + A + +P +++ + W +L++
Sbjct: 371 KLGYMNCAHTVFDQLP-RKDTISWNTLVTG 399
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/452 (46%), Positives = 305/452 (67%), Gaps = 1/452 (0%)
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+A AKL ++EG ++H + GFE +FVQN+L++MY C E A +F+ M ++++
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+++I +A NG +E L LF EM + P+ +VS+LSAC LGAL LG+ H
Sbjct: 63 TWNSVINGYALNGRPNEALTLFREMG-LRGVEPDGFTMVSLLSACAELGALALGRRAHVY 121
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+++ N+ +L+D+Y KCG + + +F M +K ++++ +I GLA++G GKEA
Sbjct: 122 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 181
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F E+ R+GL P ++ +VGVL ACSH G+V+EG F RMK EY IVP ++HYGC+VD
Sbjct: 182 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 241
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG++ +A E IQ+MP+Q N VVWR+LL A +H +L +GE+A L Q+ H D
Sbjct: 242 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGD 301
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA QRW DV K+R M +G+ ++PG SLVE+ ++++FV DRSHP + I
Sbjct: 302 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEI 361
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ LK EGY P IS VL D++E+EK L HS+K+AIAF LI+ + G PIR+
Sbjct: 362 YVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRV 421
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKR 590
+NLR+C DCH KLIS +++REI+VRDR R
Sbjct: 422 VKNLRVCADCHLAIKLISKVFDREIVVRDRSR 453
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 9/213 (4%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDF 99
++ E +KVH+ ++ GF F + LV A C G + A +F + E +
Sbjct: 10 DVREGEKVHSIAIRNGFESLVFVQNTLVHMYAAC-----GHAESAHKLFELMAERNLVTW 64
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N++I G+ EAL L+ EM RGVEPD FT +L ACA+L AL G + H ++ K
Sbjct: 65 NSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVK 124
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
VG + +L N+L+++Y KC + A +F +M++KSV SW+++I A NG E L+L
Sbjct: 125 VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALEL 184
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
F E+ K P E V VL AC+H G +D G
Sbjct: 185 FKEL-ERKGLMPSEITFVGVLYACSHCGMVDEG 216
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/510 (41%), Positives = 322/510 (63%), Gaps = 3/510 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N++I + + A+ L++ M E GV PD T +L A A+ +H +V
Sbjct: 237 WNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVR 296
Query: 159 KVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ G++ D+ N++++MY K K++ A +F + + V SW+ +I + NGL +E +
Sbjct: 297 RRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAI 356
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+++ +M+N + +P + VSVL A ++LG L G H I+ L+V V T LID+
Sbjct: 357 RIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDL 416
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L + + LF M + ++ +I+GL +HG G +ALS+FS+M +E ++PD V +
Sbjct: 417 YAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTF 476
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
V +L+ACSHAGLV++G FD M+ Y IVP +HY C+VD++GRAG L EA E IQSMP
Sbjct: 477 VSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMP 536
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
I+ + VW +LL A ++H N+E+G++A++NLF+++ + YVL+SNMYA+ +W V
Sbjct: 537 IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDA 596
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVS--QDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
+R+ + + L ++PG+S +EV V F S Q HP + I +H + ++K GY
Sbjct: 597 VRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYV 656
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
PD S VL+DV+EDEK + L HS++LAIAF +I+ G+P+ I +NLR+C DCH+ TK I
Sbjct: 657 PDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYI 716
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S I EREIIVRD RFH FKDG CSC D+W
Sbjct: 717 SKITEREIIVRDANRFHHFKDGHCSCGDFW 746
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 185/383 (48%), Gaps = 10/383 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+++ ++HA L+ G N F + +LV A +G + A +F ++ E
Sbjct: 75 LVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVH--AYLRFGRVAEAYRVFDEMPERD 132
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+N ++ G + +A+ L M GV D T ++ C L + +H
Sbjct: 133 VPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHV 192
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ K G +LFV N+LI++YGK + A +F M + + +W++II+A+ G +
Sbjct: 193 YAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAA 252
Query: 216 CLKLF-GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL-IRNISALNVIVETS 273
++LF G M + C P+ LVS+ SA G K H + R ++I +
Sbjct: 253 AVELFHGMMESGVC--PDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNA 310
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEP 332
++DMY K ++ +F + D+ ++++ +I+G +G EA+ I+++M EGL+P
Sbjct: 311 MVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKP 370
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+V VL A S+ G + +G+ + ++ + V C++DL + G L EA+ L
Sbjct: 371 IQGTFVSVLPAYSYLGGLQQGMR-MHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFL 429
Query: 393 IQSMPIQQNDVVWRSLLSASKVH 415
+ MP +++ W ++++ VH
Sbjct: 430 FEHMP-RRSTGPWNAIIAGLGVH 451
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFA 185
+ PD+FTFP L +A Q+H ++G ++F SL++ Y + +V A
Sbjct: 65 LRPDSFTFPPLVRAAP---GPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F +M ++ V +W+A+++ N ++ + L G M E + L SVL C
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGV-AGDAVTLSSVLPMCVV 180
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
LG L H +++ + + V +LID+Y K G L + +F MA + +T++ +
Sbjct: 181 LGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSI 240
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG--LVNEGLLCFDRMKLE 363
IS G+ A+ +F M+ G+ PD + V + SA + G L + + C+ R +
Sbjct: 241 ISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRR-- 298
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
V + +VD+ + + A ++ ++P ++ V W +L++
Sbjct: 299 GWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLP-DRDVVSWNTLITG 345
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/506 (41%), Positives = 324/506 (64%), Gaps = 1/506 (0%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N++IR ++ + +L+++ M + + PD+ TFPA+ KA A+L G IHG V +
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+GF CD++ +L+++Y C + AS +F +M +++ +W+A+I + N + + +
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F M + +P E +V VLSAC+HLGA + GK H + N LNV V T+LIDMY
Sbjct: 178 FRGMLADGA-QPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYA 236
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG + + +F + +K T++V+ISG AM+GQG AL FS ML E +PD+V ++G
Sbjct: 237 KCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLG 296
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
VL AC H GLV EG F MK ++ + P ++HYGC+VDL+GRAG+L EALELIQSM I+
Sbjct: 297 VLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSIE 356
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ ++WR+LL A +VH N ++GE K L ++ ++ +YVLLSN+Y+R +RW +V K+R
Sbjct: 357 PDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLR 416
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M +G+ + PG S +E+ VY+FV+ + P ++ IY+ + + +LK GY
Sbjct: 417 GMMNLRGIRKVPGCSSIEINNVVYEFVASNDRKPEFEAIYKQLDNLIKKLKENGYVTGTD 476
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
L D++++EK + HS+KLA+AF L++ +RI +NLR+C DCH + K++S++Y
Sbjct: 477 MALYDIEKEEKEHSVMYHSEKLALAFGLLNSPLDCTLRIVKNLRICLDCHEFFKVLSLVY 536
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+R I+VRDR RFH F +G CSCRDYW
Sbjct: 537 KRYIVVRDRNRFHHFYEGFCSCRDYW 562
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 141/292 (48%), Gaps = 13/292 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
K +H V++ GF + + ++ LV TC S+ A +F ++ E A +N LI
Sbjct: 109 KMIHGIVIQMGFICDVYTSTALVHLYCTCL-----SISDASQLFDEMPERNAVTWNALIT 163
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+ +F +A+ + M G +P T + AC+ L A +G IH ++
Sbjct: 164 GYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRL 223
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++FV +LI+MY KC V +F+++ +K+V +W+ +I+ +A NG L+ F M
Sbjct: 224 NVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRML 283
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCGC 283
E ++P+E + VL AC H G + G+ S+ + I ++D+ + G
Sbjct: 284 MEN-FKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGL 342
Query: 284 LEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
LE+ L L + M+ + + + ++ +HG K I ++ LEP++
Sbjct: 343 LEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIE--LEPNN 392
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/574 (39%), Positives = 348/574 (60%), Gaps = 11/574 (1%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C LE K+VH + + GF + F + LVA A G ++ A +F +D+
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYA--KCGRVEQARIVFEGLDD 232
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+ + EAL ++ +M +R V+PD ++ +A ++ L++G I
Sbjct: 233 RNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSI 292
Query: 154 HGHVFKVG--FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
HG V K+G FE DL + SL MY KC +V A + F QM+ +V W+A+I+ +A NG
Sbjct: 293 HGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNG 350
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+E + LF EM ++ R + + S + AC +G+LDL K + + +V V
Sbjct: 351 YTNEAVGLFQEMISKNI-RTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVN 409
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+LIDM+ KCG ++ +F DK + +S MI G +HG+G++A+ +F M + G+
Sbjct: 410 TALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVC 469
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+DV +VG+L+AC+H+GLV EG F MK Y I QHY CVVDL+GR+G L EA +
Sbjct: 470 PNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYD 528
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I +MPI+ VW +LL A K++ ++ +GE AA+ LF ++ + YV LSN+YA ++
Sbjct: 529 FITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRL 588
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VAK+R M KGL++ G+SL+E+ K+ F D+SHP + I+E + +E +LK
Sbjct: 589 WDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKE 648
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ P I VL D++++EK E L HS++LAIA+ LI + G+ +RI +NLR C +CH+
Sbjct: 649 AGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSA 708
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS + REI+VRD RFH FK+G CSCRDYW
Sbjct: 709 TKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 196/370 (52%), Gaps = 7/370 (1%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
++HA ++ G + F + V A + G + YA +F + EP F +N +IRG+
Sbjct: 87 LNQIHAQLVVSGLVESGFLVTKFVN--ASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGY 144
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
F +A+ +Y+ M GV PD FT P + KAC+ + L+ G ++HG +F++GFE D+
Sbjct: 145 SSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDV 204
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FVQN L+ +Y KC +VE A +F+ +D +++ SW+++I+ + NGL E L++FG+M
Sbjct: 205 FVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQR 264
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+P+ LVSVL A T + L+ GK HG +++ + SL MY KCG +
Sbjct: 265 NV-KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMV 323
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
F M + ++ MISG A +G EA+ +F EM+ + + D + + AC+
Sbjct: 324 ARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQ 383
Query: 347 AGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
G ++ D + K EYR V ++D+ + G + A E+ + ++ VVW
Sbjct: 384 VGSLDLAKWMGDYINKTEYRNDVFVN--TALIDMFAKCGSVDLAREVFDRT-LDKDVVVW 440
Query: 406 RSLLSASKVH 415
+++ +H
Sbjct: 441 SAMIVGYGLH 450
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/525 (42%), Positives = 322/525 (61%), Gaps = 33/525 (6%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE--------- 163
EEAL L+ EM GV D + AC+++ ++ G +HG KVG E
Sbjct: 252 EEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNAL 311
Query: 164 -----------------------CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
DL NS+I+ Y +C ++ A +F M +K V SW
Sbjct: 312 IHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSW 371
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
SA+I+ +A + +SE L LF EM RP+E+ LVS +SACTHL LDLGK H +
Sbjct: 372 SAMISGYAQHECFSEALALFQEMQLHGV-RPDETALVSAISACTHLATLDLGKWIHAYIS 430
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
RN +NVI+ T+LIDMY+KCGC+E L +F M +K T++ +I GLAM+G +++L+
Sbjct: 431 RNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLN 490
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F++M + G P+++ ++GVL AC H GLVN+G F+ M E++I ++HYGC+VDL+
Sbjct: 491 MFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLL 550
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG+L EA ELI SMP+ + W +LL A + H + E+GE + L Q+ H +V
Sbjct: 551 GRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHV 610
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA W +V +IR MA G+ ++PG S++E V++F++ D++HP ++I
Sbjct: 611 LLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEH 670
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
M+ + +LK EGY P S+V D+DE+EK L HS+KLA+AF LI +S +PIR+ +
Sbjct: 671 MLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITISPPTPIRVTK 730
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+CNDCHT KLIS ++R+I+VRDR RFH FK G CSC D+W
Sbjct: 731 NLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 48/316 (15%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---DYACSIFRQID 92
++L++CK FK++ + + G +P+ AS L+ SH ++ Y+ IF +
Sbjct: 8 SLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFS--SHSTTLVPFHYSLRIFNHLR 65
Query: 93 EPGAFDFNTLIRGFVK-EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P F +NT++R + + +AL Y +PD++T+P L + CA + EG
Sbjct: 66 NPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGR 125
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+H H GF+ D++V+N+L+N+Y C V A +F++ + SW+ ++A + G
Sbjct: 126 QLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAG 185
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E ++F M PE N I
Sbjct: 186 EVEEAERVFEGM-------PER---------------------------------NTIAS 205
Query: 272 TSLIDMYVKCGCLEKGLCLFRMM--ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
S+I ++ + GC+EK +F + ++ +++S M+S + G+EAL +F EM G
Sbjct: 206 NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSG 265
Query: 330 LEPDDVVYVGVLSACS 345
+ D+VV V LSACS
Sbjct: 266 VAVDEVVVVSALSACS 281
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 171/391 (43%), Gaps = 89/391 (22%)
Query: 46 EFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
E +++HAH + GF + + + NL A C GS+ A +F + +NTL
Sbjct: 123 EGRQLHAHAVSSGFDGDVYVRNTLMNLYAVC-----GSVGSARRVFEESPVLDLVSWNTL 177
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ G+V+ E EEA ++ M ER
Sbjct: 178 LAGYVQAGEVEEAERVFEGMPER------------------------------------- 200
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLF 220
+ NS+I ++G+ VE A IF + ++ + SWSA+++ + N + E L LF
Sbjct: 201 --NTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLF 258
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG---------------SLIRNISA 265
EM +E ++VS LSAC+ + +++G+ HG +LI S+
Sbjct: 259 VEMKGSGV-AVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSS 317
Query: 266 LNVIVE-----------------TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
IV+ S+I Y++CG ++ LF M +K +++S MISG
Sbjct: 318 CGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISG 377
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC---FDRMKLEYR 365
A H EAL++F EM G+ PD+ V +SAC+H ++ G R KL+
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ + ++D+ + G + ALE+ +M
Sbjct: 438 VILSTT----LIDMYMKCGCVENALEVFYAM 464
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+ A +F + E ++ +I G+ + F EAL L+ EM GV PD +
Sbjct: 351 GSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAI 410
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L L G IH ++ + + ++ + +LI+MY KC VE A +F M++K V+
Sbjct: 411 SACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVS 470
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A+I A NG + L +F +M P E + VL AC H+G ++ G+ S
Sbjct: 471 TWNAVILGLAMNGSVEQSLNMFADMKKTGT-VPNEITFMGVLGACRHMGLVNDGRHYFNS 529
Query: 259 LI--RNISALNVIVETSLIDMYVKCGCLEKG 287
+I I A N+ ++D+ + G L++
Sbjct: 530 MIHEHKIEA-NIKHYGCMVDLLGRAGLLKEA 559
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/558 (39%), Positives = 329/558 (58%), Gaps = 32/558 (5%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++D A IF + + +NT++ +V++ E L + EM + G PD T +
Sbjct: 289 GAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAV 348
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC++L + G HG+V + G E V N++INMY KC K E A +F +M K+
Sbjct: 349 SACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRV 408
Query: 199 SWSAIIAAHASNG-------------------------------LWSECLKLFGEMNNEK 227
SW+++IA NG ++ E ++LF M +E
Sbjct: 409 SWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEG 468
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++ +V V SAC +LGALDL K HG + + ++ + T+L+DM+ +CG +
Sbjct: 469 I-TADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSA 527
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ +F M + ++ I +AM G G A+ +F EML++G++PD VV+V +L+A SH
Sbjct: 528 MQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHG 587
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV +G F MK Y I P HYGC+VDL+GRAG+L EAL LI SM ++ NDV+W S
Sbjct: 588 GLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGS 647
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL+A +VH N++I AA+ + +++ +VLLSN+YA A RW DVAK+R + KG
Sbjct: 648 LLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGA 707
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++ PG S +E+ K+++F + D SHP +I M+ ++ +L+ GY PD++ VL DV+E
Sbjct: 708 HKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLLDVNE 767
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
EK L HS+KLAIAFALI QG PIR+A+NLR+C+DCH++ KL+S Y REIIVRD
Sbjct: 768 KEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRD 827
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH F+ G CSC DYW
Sbjct: 828 NNRFHFFQQGFCSCGDYW 845
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 199/368 (54%), Gaps = 21/368 (5%)
Query: 4 TSVLHQSLLLTQPEEP-----PKGPELNLRLKEQECLT-ILKTCKNLEEFKKVHAHVLKW 57
+ LH S L+ P P P EL + K + T K CK + E K++H+ + K
Sbjct: 2 AATLHLSTLI--PATPTSVALPNQNELKILTKHRSSPTGSFKKCKTMTELKQLHSQITKN 59
Query: 58 GFFWNPFCASNLVATCA-LSHWGSMDYACSIFRQIDEPGA-----FDFNTLIRGFVKEVE 111
G +P +NL+++C + + S++YA E + F++LIRGF
Sbjct: 60 GLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGL 119
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
+A+ ++ ++ G PDNFTFP + AC K AL EG Q+HG + K+GFE D+FV+NS
Sbjct: 120 GYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENS 179
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
LI+ YG+C +++ +F +M +++V SW+++I +A G + E + LF EM E RP
Sbjct: 180 LIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEM-VEVGIRP 238
Query: 232 EESILVSVLSACTHLGALDLGK--CT-HGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+V V+SAC L L LG+ CT G L ++AL V +L+DMY+KCG ++K
Sbjct: 239 NSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV---NALVDMYMKCGAIDKAR 295
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F DK + Y+ ++S G +E L++ EML+ G PD + + +SACS
Sbjct: 296 KIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELD 355
Query: 349 LVNEGLLC 356
V+ G C
Sbjct: 356 DVSCGKWC 363
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 200/416 (48%), Gaps = 41/416 (9%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L C L E +VH ++K GF + F ++L+ G +D +F ++ E
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHF--YGECGEIDCMRRVFDKMSE 202
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +LI G+ K ++EA+ L+ EM E G+ P++ T + ACAKLQ L+ G Q+
Sbjct: 203 RNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV 262
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
+ ++ E + + N+L++MY KC ++ A IF + K++ ++ I++ + GL
Sbjct: 263 CTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLA 322
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L + GEM RP+ ++S +SAC+ L + GK HG ++RN V +
Sbjct: 323 REVLAVLGEMLKHGP-RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNA 381
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG------------------ 315
+I+MY+KCG E +F M +K +++++ +I+G +G
Sbjct: 382 IINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSW 441
Query: 316 -------------KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
KEA+ +F M EG+ D V VGV SAC + G ++ L + +
Sbjct: 442 NTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALD--LAKWIHGYI 499
Query: 363 EYRIVPTVQHYG-CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+ + + H G +VD+ R G A+++ M ++++ W + + A + N
Sbjct: 500 KKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/618 (36%), Positives = 352/618 (56%), Gaps = 46/618 (7%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
++ E +++L C ++ + K+VHAH+ + G F + L+ T Y +
Sbjct: 36 KILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLV 95
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F+Q++ P F + LIRG+ + F E++ LYN M +G+ P +FTF AL KAC+ +
Sbjct: 96 FQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDV 155
Query: 148 KEGMQIHGHVFKV-GFECDLFVQNSLINMYGKC--------------------------- 179
G Q+H + GF DL+V N+LI+MY KC
Sbjct: 156 NLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215
Query: 180 ----EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
+E AS +F + K + +W+A++ +A N E L++F M + +E
Sbjct: 216 YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGV-KTDEVT 274
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNIS-------ALNVIVETSLIDMYVKCGCLEKGL 288
LV V+SAC LGA + + +R+++ NV+V ++LIDMY KCG +E
Sbjct: 275 LVGVISACAQLGA-----AKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAY 329
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M ++ +YS MI G AMHG A+ +F EML+ ++P+ V ++GVL+ACSHAG
Sbjct: 330 KVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAG 389
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
+V +G F M+ + + P+ HY C+VDL+GRAG L EAL L++ MP+ + VW +L
Sbjct: 390 MVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGAL 449
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A ++H N ++ +IAA +LF++ + +Y+LLSN+YA A RW DV+K+R M +KGL
Sbjct: 450 LGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLK 509
Query: 469 QSPGFSLVEVARK-VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S VE + +++F + D SHP I + + + +LK+ GY P++S V D+ +
Sbjct: 510 KNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISD 569
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK+ L HS+KLA+AF L+ + G IRI +NLR+C DCH+ S I REI+VRD
Sbjct: 570 EEKKRLLMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRD 629
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH F+DG CSC ++W
Sbjct: 630 NMRFHHFRDGRCSCGNFW 647
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 339/572 (59%), Gaps = 9/572 (1%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
C ++L C ++VH ++K GF N + S LV A G + A ++ +++
Sbjct: 275 CSSVLARCFG----EQVHGFIVKSGFGSNVYVQSALVDMYA--KCGDLKNAKNMLETMED 328
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+L+ GFV+ EEAL L+ M R ++ D++TFP++ C + +
Sbjct: 329 DDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSV 386
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG + K GFE V N+L++MY K ++ A +F++M +K V SW++++ +A N
Sbjct: 387 HGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSH 446
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E LK+F +M P++ I+ S+LSAC L L+ GK H I++ + V S
Sbjct: 447 EESLKIFCDMRVTGV-NPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+ MY KCGCL+ +F M K +T++ +I G A +G+G+ +L + M+ G PD
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPD 565
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++G+L ACSHAGLV+EG F +M Y I P +HY C++DL GR+G L EA +L+
Sbjct: 566 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 625
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
M ++ + VW+SLLSA +VH NLE+ E AA NLF++ + YV+LSNMY+ +++W
Sbjct: 626 DQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWN 685
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
DVAKIR M SKG+ + PG S +E+ +V F+S DR HP IY I ++ ++K G
Sbjct: 686 DVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAG 745
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y PD+S L D+D++ K L HS+KLA+AF L+ +PIRI +NLR+C DCH+ K
Sbjct: 746 YVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMK 805
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS ++ R II+RD FH F++G CSC DYW
Sbjct: 806 YISRVFTRHIILRDSNCFHHFREGECSCGDYW 837
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 198/380 (52%), Gaps = 14/380 (3%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR--Q 90
++L+ C +L + + +H V+K GF N F + LV A + A +F+ +
Sbjct: 167 SVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCK--CVSEAEFLFKGLE 224
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
D + ++ G+ + + +A+ + M +GVE + +TFP + AC+ + A G
Sbjct: 225 FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFG 284
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+HG + K GF +++VQ++L++MY KC ++ A + + M+ V SW++++ +
Sbjct: 285 EQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRH 344
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL E L+LF M+ + ++ SVL+ C +G+++ K HG +I+ +V
Sbjct: 345 GLEEEALRLFKNMHGRN-MKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLV 401
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+DMY K G ++ +F M +K ++++ +++G A + +E+L IF +M G+
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGV 461
Query: 331 EPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
PD + +LSAC+ L+ G + D +K R +V Y +V + + G L +A
Sbjct: 462 NPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGCLDDA 519
Query: 390 LELIQSMPIQQNDVVWRSLL 409
+ SM + ++ + W +++
Sbjct: 520 DAIFVSMQV-KDVITWTAII 538
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 158/304 (51%), Gaps = 15/304 (4%)
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
EA L+ M G + FT ++ + C+ L ++ G IHG V K GFE ++FV L+
Sbjct: 145 EAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLV 204
Query: 174 NMYGKCEKVEFASAIFK--QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+MY KC+ V A +FK + D+K+ W+A++ +A NG + ++ F M+ +
Sbjct: 205 DMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGV-EC 263
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ ++L+AC+ + A G+ HG ++++ NV V+++L+DMY KCG L+ +
Sbjct: 264 NQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNML 323
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M D ++++ ++ G HG +EAL +F M ++ DD + VL+ C G +N
Sbjct: 324 ETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSIN 382
Query: 352 ----EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GL+ + Y++V +VD+ + G + A + + M ++++ + W S
Sbjct: 383 PKSVHGLIIKTGFE-NYKLVSNA-----LVDMYAKTGDMDCAYTVFEKM-LEKDVISWTS 435
Query: 408 LLSA 411
L++
Sbjct: 436 LVTG 439
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 61/299 (20%)
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG-------LWSEC-- 216
++ N L+N K +V A +F +M QK SW+ +I+++ + G L+ C
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 217 ----------------------LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
LF M E W+ + L SVL C+ LG + G+
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEG-WKASQFTLGSVLRVCSSLGLIQTGEM 183
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMH 312
HG +++N NV V T L+DMY KC C+ + LF+ + K + ++ M++G A +
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMK 361
G G +A+ F M +G+E + + +L+ACS H +V G
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGF------- 296
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLE 419
V +VD+ + G L A ++++M + +DVV W SL+ V H LE
Sbjct: 297 -----GSNVYVQSALVDMYAKCGDLKNAKNMLETM--EDDDVVSWNSLM-VGFVRHGLE 347
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/637 (36%), Positives = 352/637 (55%), Gaps = 66/637 (10%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
C ++L C++L+ K+VHA+V K G +P A L+ A+S ++DYA +F
Sbjct: 8 CSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPN 67
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-DNFTFPALFKACAKLQALKEGMQ 152
P F NTLIRG + + +L + EM R P D+F+F L KA A ++L+ G+Q
Sbjct: 68 PDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQ 127
Query: 153 ------IHG-------------------------HVFKVGFECDLFVQNSLINM------ 175
+HG VF+ FE ++ N+++
Sbjct: 128 LHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGD 187
Query: 176 -------------------------YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Y K ++E A +F +M K SWS +I A N
Sbjct: 188 VKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHN 247
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + E F E+ + RP E L LSAC GA++ GK HG + ++ V V
Sbjct: 248 GFFYEAFGFFRELQ-QVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSV 306
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+D Y KCG + +F M +K + +++ MI+GLAMHG G+EA+ +F EM G
Sbjct: 307 NNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESG 366
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PD + ++ +L ACSHAGL+ +G F +MK Y I P ++HYGC+VDL GRAG L +A
Sbjct: 367 IRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKA 426
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E I MP+ ++WR+LL A +H N+++ E + L +++ ++ D+VLLSN+YA A
Sbjct: 427 YEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVA 486
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W DVA +R M + +N++PG+S++EV + +Y FV+ + + + YE + ++ +L
Sbjct: 487 GKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKL 546
Query: 510 KFEG-YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+ EG Y P++ VL D++++EK + + HS+KLA+AF + L +GS IRI +NLR+C DC
Sbjct: 547 RVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDC 606
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT KLIS +Y EI+VRDR RFH FK G+CSCRDYW
Sbjct: 607 HTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 335/582 (57%), Gaps = 11/582 (1%)
Query: 28 RLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
RL L IL L+E + ++H+ K G + + + + ++ S G + A
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL--YSKCGKIKMA 275
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++FR+ P +N +I G+ E E +L L+ E+ G + + T +L L
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL 335
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ IHG+ K F V +L +Y K ++E A +F + +KS+ SW+A+I
Sbjct: 336 MLI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ + NGL + + LF EM N + + P + +LSAC LGAL LGK H L+R+
Sbjct: 393 SGYTQNGLTEDAISLFREMQNSE-FSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTD 450
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++ V T+LI MY KCG + + LF M K ++T++ MISG +HG G+EAL+IFS
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFS 510
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EML G+ P V ++ VL ACSHAGLV EG F+ M Y P+V+HY CVVD++GRA
Sbjct: 511 EMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRA 570
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L AL+ I++MPIQ VW +LL A ++H + + ++ LF+++ + +VLLS
Sbjct: 571 GHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+++ + + A +R + L ++PG++L+E+ + F S D+SHP I+E +
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLE 690
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E +++ GY P+ L DV+E+E+ +K HS++LAIAF LI G+ IRI +NLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT TKLIS I ER I+VRD RFH FKDG CSC DYW
Sbjct: 751 VCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 153/323 (47%), Gaps = 3/323 (0%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
+ + L + K ++ + HA ++ GF + + L T LS G++ YA IF
Sbjct: 18 ISKNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKL--TQRLSDLGAIYYARDIF 75
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQAL 147
+ P F FN L+RGF +L ++ + + ++P++ T+ A + +
Sbjct: 76 LSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDD 135
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ G IHG G + +L + ++++ MY K +VE A +F +M +K W+ +I+ +
Sbjct: 136 RAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
N ++ E +++F ++ NE C R + + L+ +L A L L LG H + +
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V T I +Y KCG ++ LFR + Y+ MI G +G+ + +LS+F E++
Sbjct: 256 DYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 328 EGLEPDDVVYVGVLSACSHAGLV 350
G + V ++ H L+
Sbjct: 316 SGAKLKSSTLVSLVPVSGHLMLI 338
>gi|225432322|ref|XP_002276230.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Vitis vinifera]
Length = 606
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/604 (37%), Positives = 354/604 (58%), Gaps = 7/604 (1%)
Query: 7 LHQSLLLTQPEE-PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFC 65
L+Q+L+ P + +L+ + + + L+ C ++ H +VLK GF + F
Sbjct: 5 LNQNLIFRVPSTCISRQNKLSHFHTKTQLIQRLQDCNDITSVSFSHTNVLKSGFLNDTFT 64
Query: 66 ASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
++L+ + + A +F ++ EP F +L+ GF+K + AL ++ +M E
Sbjct: 65 TNHLINSYV--RIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRPKSALLIFCKMLES 122
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
V P+ FTF + AC+ L L+ G +IH HV G +C+L V +SLI+MYGKC V+ A
Sbjct: 123 WVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDA 182
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F MD ++V SW+++I A+ N L L+LF E N P +L SV++AC
Sbjct: 183 RRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSPNHFMLASVINACAS 242
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
LG L GK H ++IR N +V ++L+DMY KCGC+ +FR + D + Y+ M
Sbjct: 243 LGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSVIPYTSM 302
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
I G A +G GK +L IF EML ++P+DV +VGVL ACSH+GLV++GL M ++
Sbjct: 303 IVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHG 362
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ--QNDVVWRSLLSASKVHHNLEIGEI 423
+VP +HY CVVD++GR G L EA +L +S+ ++ Q ++W +LLSAS+++ ++I
Sbjct: 363 VVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAVE 422
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
A+K L + N + YV +SN YA A +W +V IR EM G+ + PG S VE+ Y
Sbjct: 423 ASKWLIESNQQVAAAYVTMSNTYAMAGKWENVHSIRYEMKHYGVYKEPGCSWVEIRDSAY 482
Query: 484 KFVSQDRSHPA-WDNIYEMIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKL 541
F + D S A + ++ ++E ++K GY ++ DV+E+ K E + HS++L
Sbjct: 483 VFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERL 542
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
A+AF LI + +G IR+ +NLRMC DCH KLIS I ER+ +VRD RFH F++G+C+C
Sbjct: 543 ALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHFENGSCTC 602
Query: 602 RDYW 605
RD+W
Sbjct: 603 RDFW 606
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/614 (38%), Positives = 354/614 (57%), Gaps = 44/614 (7%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E + +T L CKNL + K+VHA +L G + + + L+ T + Y SIF Q
Sbjct: 46 ESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
++ P F +N LIRG++ E +E+ Y+ M + GV P +FTF ALFKAC + G
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165
Query: 151 MQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
QIHG VG F DL V NS+I+MY KC +E +F +M + V SW+ +I+A+
Sbjct: 166 RQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVK 225
Query: 210 NGLWSECLKLFGEM--NNEKCW-----------RPEESI-----------------LVSV 239
+G +LF + + W +P E+I L+ V
Sbjct: 226 SGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGV 285
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALN-------VIVETSLIDMYVKCGCLEKGLCLFR 292
+SAC LGA + IR+++ + V+V ++LIDMY KCG + +F+
Sbjct: 286 ISACAQLGA-----AKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M ++ +YS MI G AMHG+ +A+ +F EM++ ++P+ V ++GVL+ACSHAG+V +
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G F+ M+ Y I P+ HY C+VDL+GRAG L EA EL+++MPI+ + VW +LL A
Sbjct: 401 GWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGAC 460
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
++H + +I IAA +LF++ + +Y+LL+N+YA RW DV+ +R M ++GL ++P
Sbjct: 461 RIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPA 520
Query: 473 FSLVEVARK-VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
FS +E + V++F S D +HP I + + + +L+ +GY P +S V DV++++KR
Sbjct: 521 FSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKR 580
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
L HS+KLA+AF LI GS IRI +NLR+C DCH+ S I REIIVRD RF
Sbjct: 581 RILMTHSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRF 640
Query: 592 HRFKDGTCSCRDYW 605
H F DG CSC ++W
Sbjct: 641 HHFHDGICSCGNFW 654
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 324/530 (61%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G +D A +FR++ + ++I G+ +E EA+ L+ EM E G+ PD +T
Sbjct: 342 SKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
A+ CA+ + L EG ++H + + D+FV N+L++MY KC + A +F +M K
Sbjct: 402 AVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVK 461
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ +I ++ N +E L LF + EK + P+E + VL AC L A D G+
Sbjct: 462 DIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN + V SL+DMY KCG L LF + K ++++VMI+G MHG G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFG 581
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KEA+++F++M + G+EPD++ +V +L ACSH+GLV+EG F+ M+ E +I PTV+HY C
Sbjct: 582 KEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 641
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD++ R G L +A I++MPI + +W +LL ++HH++++ E A+ +F++ +
Sbjct: 642 IVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPEN 701
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVL++N+YA A++W +V ++R + +GL ++PG S +E+ +V FV+ D S+P
Sbjct: 702 TGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPET 761
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ I + + ++ EGYSP L D +E EK E L GHS+KLA+A +I G
Sbjct: 762 EKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKI 821
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH K +S + REI++RD RFH+FKDG CSCR +W
Sbjct: 822 IRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 198/381 (51%), Gaps = 12/381 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL--SHWGSMDYACSIFRQ 90
++L+ C K+L++ K+V + GF + SNL + AL ++ G + A +F Q
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVLD----SNLGSKLALMYTNCGDLKEASRVFDQ 154
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ A +N L+ K +F ++ L+ +M GVE D++TF + K+ + L+++ G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+HG++ K GF V NSL+ Y K +V+ A +F +M ++ V SW++II + SN
Sbjct: 215 EQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL + L +F +M + + +VSV + C + LG+ H ++ +
Sbjct: 275 GLAEKGLSVFVQMLFSGI-EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRF 333
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+DMY KCG L+ +FR M+ + ++Y+ MI+G A G EA+ +F EM EG+
Sbjct: 334 CNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD VL+ C+ L++EG + +K E + + ++D+ + G + EA
Sbjct: 394 SPDVYTVTAVLNCCARNRLLDEGKRVHEWIK-ENDMGFDIFVSNALMDMYAKCGSMREA- 451
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
EL+ S ++ + W +++
Sbjct: 452 ELVFSEMRVKDIISWNTVIGG 472
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 152/329 (46%), Gaps = 33/329 (10%)
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
D NT +R F + + A+ L + + ++P T ++ + CA ++LK+G ++ +
Sbjct: 63 DANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFI 120
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
GF D + + L MY C ++ AS +F Q+ + W+ ++ A +G +S +
Sbjct: 121 RGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF +M + + V + + L +++ G+ HG ++++ V SL+
Sbjct: 181 GLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAF 239
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y+K ++ +F M ++ ++++ +I+G +G ++ LS+F +ML G+E D
Sbjct: 240 YLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATI 299
Query: 338 VGVLSACSHAGLVNEG--LLCF--------------------------DRMKLEYRIVP- 368
V V + C+ + L++ G + CF D K+ +R +
Sbjct: 300 VSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSG 359
Query: 369 -TVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V Y ++ R G+ GEA++L + M
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 31 EQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
E+ +L C +L F K +H ++++ G+F + A++LV A G++ A +
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA--KCGALLLARLL 556
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F I + +I G+ +EA+ L+N+M + G+EPD +F +L AC+ +
Sbjct: 557 FDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLV 616
Query: 148 KEG 150
EG
Sbjct: 617 DEG 619
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 364/631 (57%), Gaps = 38/631 (6%)
Query: 10 SLLLTQPEEPP-----KGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPF 64
SL + P P P+ L +++ +++L+ K++ + +HA +++ G +PF
Sbjct: 23 SLPFSGPSPKPHPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPF 82
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
L+ +C+ H ++DYA IF+ P + + LI GFV + +A+ LY+ M
Sbjct: 83 MVFELLRSCSKCH--AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLH 140
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ PDN+ ++ KAC AL+EG ++H K+G + V+ ++ +YGKC ++
Sbjct: 141 DSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGD 200
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK--CW------------- 229
A +F++M + VAS + +I++++ GL E +F + + CW
Sbjct: 201 ARRVFEEMPEDVVAS-TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEM 259
Query: 230 ---------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
RP E +V VLSAC+ LGAL++G+ H + + LN+ V +L
Sbjct: 260 NRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNAL 319
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
I+MY +CG +++ +F M D+ +TY+ MISGL+M+G+ ++A+ +F M+ L P +
Sbjct: 320 INMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTN 379
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V +VGVL+ACSH GLV+ G F M +Y + P ++HYGC+VDL+GR G L EA +LI+
Sbjct: 380 VTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIR 439
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
+M + + ++ +LLSA K+H NLE+GE AK L YVLLS++YA + +W +
Sbjct: 440 TMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKE 499
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
A++R +M G+ + PG S +EV ++++F+ D HP + IYE + ++ L+ EGY
Sbjct: 500 AAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGY 559
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P+ VL+D+++ EK L HS++LAI + LI + IR+ +NLR+C DCH+ KL
Sbjct: 560 HPEKEVVLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKL 619
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I+ I R+++VRDR RFH F++G CSC DYW
Sbjct: 620 IAKITRRKVVVRDRNRFHYFENGACSCGDYW 650
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/648 (36%), Positives = 350/648 (54%), Gaps = 73/648 (11%)
Query: 27 LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYAC 85
L E C IL ++ KK+H VL + WNP L+ A G A
Sbjct: 17 LSFTEDLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAAC--GEPGLAR 74
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
IF +I + FN +IR +V +++AL +Y M+ +G PD +T+P + KA ++
Sbjct: 75 HIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSD 134
Query: 146 ALKEGMQIHGHVFKVGFEC-------------------------------DLFVQNSLIN 174
+L G+QIHG V K+G + D+ NS+++
Sbjct: 135 SLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVS 194
Query: 175 MYGK----------CEKVE---------------------------FASAIFKQMDQKSV 197
+Y + C ++E + +F ++ +KSV
Sbjct: 195 VYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSV 254
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+ +IA + +N + E + L+ +M P+ +VSVL A L AL LG+ H
Sbjct: 255 ISWNVMIAMYVNNSMPKEAVVLYSQMEANGV-EPDVVSIVSVLPAYGDLSALSLGRRVHK 313
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
R N+++E +LIDMY KCGCL +F M + ++++ +IS GQG++
Sbjct: 314 FAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRD 373
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A+++F+EM GL PD + +V VL+ACSHAGL+++G F+ M E I P ++H+ CVV
Sbjct: 374 AVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVV 432
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG + EA I+ MP++ ++ VW LLSA +V+ N+ IG +AA L +N H
Sbjct: 433 DLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSG 492
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLSN+YA+A RW DVA IR+ M KG+ + PG S VE+ V+ F++ D SHP
Sbjct: 493 YYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKK 552
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IYE + + ++K GY P+ L DV+E++K L HS+KLA+AFA+I+ G+PIR
Sbjct: 553 IYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIR 612
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C DCH KLIS I EREII+RD RFH F++G CSC DYW
Sbjct: 613 VTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/586 (37%), Positives = 345/586 (58%), Gaps = 23/586 (3%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG--------------------SM 81
K+ + +HA V++ GF ++ + A+ L+ + H +
Sbjct: 90 KHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKI 149
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D +F ++ +NT+I G + +EEAL + EM + + PD+FT ++
Sbjct: 150 DSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIF 209
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ + +G +IHG+ + GF+ D+F+ +SLI+MY KC +VE + F + + SW+
Sbjct: 210 TEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWN 269
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+IIA NG + + L F M EK +P + SV+ AC HL AL+LGK H +IR
Sbjct: 270 SIIAGCVQNGRFDQGLGFFRRMLKEKV-KPMQVSFSSVIPACAHLTALNLGKQLHAYIIR 328
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRM--MADKCQLTYSVMISGLAMHGQGKEAL 319
N + +SL+DMY KCG ++ +F M D+ ++++ +I G AMHG +A+
Sbjct: 329 LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAV 388
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
S+F EML +G++P V ++ VL+ACSHAGLV+EG F+ M+ ++ + P ++HY V DL
Sbjct: 389 SLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADL 448
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG L EA + I +M + VW +LL+A + H N+E+ E + ++ + +
Sbjct: 449 LGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAH 508
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
V++SN+Y+ AQRW D AK+R M GL ++P S +EV KV+ F++ D+SHP +D I
Sbjct: 509 VIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKIN 568
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
E ++ + Q++ EGY D ++VL DVDE+ KR+ L+ HS++LAIAF +I + G+ IR+
Sbjct: 569 EALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVI 628
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+N+R+C DCHT K ++ I REIIVRD RFH FK+G+CSC DYW
Sbjct: 629 KNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 23/282 (8%)
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P + + +I+ + +L +N + G+ PD FP+L +A + +
Sbjct: 39 PHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSL 98
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCE----------------------KVEFASAIFKQ 191
H V ++GF DL+ N+L+NMY K K++ +F +
Sbjct: 99 HAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDR 158
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
M + V SW+ +IA +A NG++ E L + EM E RP+ L S+L T +
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENL-RPDSFTLSSILPIFTEHANVTK 217
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK HG IR+ +V + +SLIDMY KC +E +C F +++++ ++++ +I+G
Sbjct: 218 GKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQ 277
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+G+ + L F ML+E ++P V + V+ AC+H +N G
Sbjct: 278 NGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLG 319
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 332/562 (59%), Gaps = 3/562 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L+ +KVH + K G P ++LV A G + A IF ++ E + LI
Sbjct: 213 LQVGQKVHMEIAKAGLELEPRVGTSLVGMYA--KCGDISKAQVIFDKLPEKNVVTWTLLI 270
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ ++ + + AL L +M + V P+ T+ ++ + C AL+ G ++H ++ + G+
Sbjct: 271 AGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYG 330
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+++V N+LI MY KC ++ A +F + + V +W+A++ +A G E + LF M
Sbjct: 331 REIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ +P++ S L++C+ L GK H L+ +L+V ++++L+ MY KCG
Sbjct: 391 QQQGI-KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGS 449
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
++ +F M+++ + ++ MI+G A HG+ +EAL F +M ++G++PD V + VLSA
Sbjct: 450 MDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSA 509
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C+H GLV EG F M L+Y I P V+HY C VDL+GRAG L EA +I +MP Q
Sbjct: 510 CTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPS 569
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
VW +LLSA ++H ++E GE AA+N+ +++ YV LSN+YA A R+ D K+R M
Sbjct: 570 VWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVME 629
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
+ + + PG S +EV KV+ F +D+SHP IY + ++ Q+K +GY PD VL
Sbjct: 630 KRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLH 689
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
DVDE++K + L HS++LAI + L+ G+PIRI +NLR+C DCHT +K IS + REI
Sbjct: 690 DVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREI 749
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
I RD RFH F DG CSC D+W
Sbjct: 750 IARDAHRFHHFVDGVCSCGDFW 771
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 190/385 (49%), Gaps = 11/385 (2%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
QEC + ++LE+ ++VHA +LK G N + + L++ A GS+ A +F I
Sbjct: 104 QECARL----RSLEQGREVHAAILKSGIQPNRYLENTLLSMYA--KCGSLTDARRVFDGI 157
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + +I FV + EA Y M G +PD TF +L A + L+ G
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H + K G E + V SL+ MY KC + A IF ++ +K+V +W+ +IA +A G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+L +M + P + S+L CT AL+ GK H +I++ + V
Sbjct: 278 QVDVALELLEKMQQAEV-APNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVV 336
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI MY KCG L++ LF + + +T++ M++G A G EA+ +F M ++G++
Sbjct: 337 NALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIK 396
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD + + L++CS + EG ++ Y + +Q +V + + G + +A
Sbjct: 397 PDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDAR 454
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVH 415
+ M ++N V W ++++ H
Sbjct: 455 LVFNQMS-ERNVVAWTAMITGCAQH 478
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 168/332 (50%), Gaps = 22/332 (6%)
Query: 88 FRQIDE-PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
FR++D + D + L K+ +EAL + N M +G + F L + CA+L++
Sbjct: 56 FRKVDTLANSGDVSIL----CKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRS 111
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L++G ++H + K G + + +++N+L++MY KC + A +F + +++ SW+A+I A
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEA 171
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ E K + M C +P++ VS+L+A T+ L +G+ H + + L
Sbjct: 172 FVAGNQNLEAYKCYETMKLAGC-KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLEL 230
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V TSL+ MY KCG + K +F + +K +T++++I+G A GQ AL + +M
Sbjct: 231 EPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQ 290
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-------CVVDL 379
+ + P+ + Y +L C+ + G K+ I+ + YG ++ +
Sbjct: 291 QAEVAPNKITYTSILQGCTTPLALEHG------KKVHRYIIQS--GYGREIWVVNALITM 342
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G L EA +L +P ++ V W ++++
Sbjct: 343 YCKCGGLKEARKLFGDLP-HRDVVTWTAMVTG 373
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/527 (40%), Positives = 318/527 (60%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F ++ E +N ++ G ++ E LFL+ EM E G PD FT ++
Sbjct: 37 GDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVL 96
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ CA L+A G Q+H +V K G+E +L V +SL +MY K + + K M ++V
Sbjct: 97 RGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVV 156
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +IA +A NG + L L+ M RP++ LVSV+S+ L L G+ H
Sbjct: 157 AWNTLIAGNAQNGHFEGVLDLYNMMKMSGL-RPDKITLVSVISSSAELATLFQGQQIHAE 215
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I+ + V V +SLI MY KCGCLE + + +S MI+ HG+G+EA
Sbjct: 216 AIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEA 275
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +M +EGL +DV ++ +L ACSH GL +G+ F M +Y + P ++HY CVVD
Sbjct: 276 VHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVD 335
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GR+G L EA +I+SMP++ + V+W++LLSA ++H N ++ A+ + ++N +
Sbjct: 336 LLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSAT 395
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN++A A+RW DV+K+RT M + + + PG S +EV +V++F D+SHP + I
Sbjct: 396 YVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEI 455
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ ++ ++K GY PD + V D D +EK L HS+KLAIAF L+++ GSPIR+
Sbjct: 456 DLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRV 515
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH KLIS I REIIVRD RFH FK G CSC DYW
Sbjct: 516 MKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 146/313 (46%), Gaps = 12/313 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C L K+VHA+VLK+G+ +N S+L S GS+ + + +
Sbjct: 94 SVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKS--GSLGEGEKVIKAMR 151
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+NTLI G + FE L LYN M G+ PD T ++ + A+L L +G Q
Sbjct: 152 IRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQ 211
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K G + V +SLI+MY KC +E + + WS++IAA+ +G
Sbjct: 212 IHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGR 271
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M E + + L S+L AC+H G + G ++ L +E
Sbjct: 272 GEEAVHLFEQMEQEGLGGNDVTFL-SLLYACSHNGLKEKGMGFFKLMVEKY-GLKPRLEH 329
Query: 272 -TSLIDMYVKCGCLEKGLCLFRMMADKCQLT-YSVMISGLAMHGQGKEALSIFSEMLREG 329
T ++D+ + GCL++ + R M + + + ++S +H A E+LR
Sbjct: 330 YTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILR-- 387
Query: 330 LEPDDVVYVGVLS 342
L P D +LS
Sbjct: 388 LNPQDSATYVLLS 400
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 124/251 (49%), Gaps = 3/251 (1%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++ N LIN + + ++ A +F +M +++VA+W+A+++ L LF EM
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREM- 80
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+E + P+E L SVL C L A GK H +++ N++V +SL MY+K G L
Sbjct: 81 HELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+G + + M + + ++ +I+G A +G + L +++ M GL PD + V V+S+
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSS 200
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ + +G ++ V ++ + + G L ++++ + + V+
Sbjct: 201 AELATLFQGQQIHAE-AIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSVL 258
Query: 405 WRSLLSASKVH 415
W S+++A H
Sbjct: 259 WSSMIAAYGFH 269
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+RNI + N+ LI+ +V+ G L+ + +F M ++ T++ M+SGL + L
Sbjct: 20 MRNIMSHNI-----LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGL 74
Query: 320 SIFSEMLREGLEPDDVVYVGVLSAC-----SHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+F EM G PD+ VL C S+AG + + E+ +V
Sbjct: 75 FLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVL--KYGYEFNLVVG----S 128
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
+ + ++G LGE ++I++M I +N V W +L++ + + + E G + N+ +++
Sbjct: 129 SLAHMYMKSGSLGEGEKVIKAMRI-RNVVAWNTLIAGNAQNGHFE-GVLDLYNMMKMSGL 186
Query: 435 HPSDYVLLSNMYARAQ--RWYDVAKIRTEMASKGLNQS 470
P L+S + + A+ + +I E G N +
Sbjct: 187 RPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSA 224
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/580 (39%), Positives = 343/580 (59%), Gaps = 15/580 (2%)
Query: 34 CLTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSI 87
C T+LK C +L E K +HA +L F + + NL A C G + YA +
Sbjct: 18 CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKC-----GDLVYARKL 72
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F ++ + LI G+ + ++AL L EM G++P+ FT +L KA + + +
Sbjct: 73 FDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGST 132
Query: 148 K--EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+G Q+HG + G++ +++V ++++MY +C +E A IF M K+ SW+A+IA
Sbjct: 133 DVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIA 192
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+A G + LF M E +P SVL AC +G+L+ GK H +I+
Sbjct: 193 GYARKGQGDKAFCLFSNMLRENV-KPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEK 251
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
L V +L+DMY K G +E +F +A + ++++ M++G + HG GK AL F EM
Sbjct: 252 LVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEM 311
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
LR + P+D+ ++ VL+ACSHAGL++EG FD MK +Y + P + HY +VDL+GRAG
Sbjct: 312 LRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGH 370
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L A++ I MPI+ VW +LL A ++H N+E+G AA+ +F+++SH+P +VLL N+
Sbjct: 371 LDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNI 430
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA A RW D AK+R M G+ + P S VE+ +V+ FV+ D +HP I+ M Q+
Sbjct: 431 YALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQI 490
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
++K GY PD S VL +D+ E+ +L+ HS+KLA+AFAL++ GS IRI +N+R+C
Sbjct: 491 SDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRIC 550
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH+ K +S + EREIIVRD RFH F DG CSC DYW
Sbjct: 551 GDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 342/617 (55%), Gaps = 52/617 (8%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+ K C L+ + K V+ ++L GF N +++ G MD A F +I+
Sbjct: 117 VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDM--FIKCGRMDIARRFFEEIEF 174
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
F +N ++ G+ + EF++AL ++ +M GV+P++ T + AC L L+ G +I
Sbjct: 175 KDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 234
Query: 154 HGHVFKVG-FECDLFVQNSLINMYGKCEKVE----------------------------- 183
HG+ KV + DL V NSL++ Y KC VE
Sbjct: 235 HGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQY 294
Query: 184 --------------FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
A ++F ++ + V W++II+A A +G L L EMN
Sbjct: 295 GDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV- 353
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYVKCGCLEKGL 288
+VS L AC+ L AL GK H +IR + N I+ SLIDMY +CG ++K
Sbjct: 354 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL-NSLIDMYGRCGSIQKSR 412
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F +M + ++++VMIS MHG G +A+++F + GL+P+ + + +LSACSH+G
Sbjct: 413 RIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSG 472
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L+ EG F MK EY + P V+ Y C+VDL+ RAG E LE I+ MP + N VW SL
Sbjct: 473 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSL 532
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A ++H N ++ E AA+ LF++ +YVL++N+Y+ A RW D AKIR M +G+
Sbjct: 533 LGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVT 592
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S +EV RK++ FV D SHP + I + + + +K GY PD + VL+DVDED
Sbjct: 593 KPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDED 652
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK L GHS+K+A+AF LI + G+P+RI +NLR+C DCH+ TK IS + +R+II+RD
Sbjct: 653 EKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDN 712
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F DG CSC DYW
Sbjct: 713 YRFHHFVDGVCSCGDYW 729
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 207/442 (46%), Gaps = 56/442 (12%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL+ C+ L + +VHA ++ G F S L+ G ++ A +F ++
Sbjct: 15 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEV--YCQTGCVEDARRMFDKMS 72
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E F + ++ + ++EE + L+ M GV PD+F FP +FKAC++L+ + G
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
++ ++ +GFE + V+ S+++M+ KC +++ A F++++ K V W+ +++ + S G
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL--NVIV 270
+ + L +F +M E +P + S +SACT+L L G+ HG I+ + L +++V
Sbjct: 193 FKKALNVFRKMVLEGV-KPNSITIASAVSACTNLSLLRHGREIHGYCIK-VEELDSDLLV 250
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM--ISGLAMHGQGKEALSIFSEM--- 325
SL+D Y KC +E F M+ ++++ M ++G +G GK AL F M
Sbjct: 251 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIA 310
Query: 326 ---LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC------- 375
E D VV+ ++SAC+ +G L M L V TV
Sbjct: 311 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 370
Query: 376 ---------------------------VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
++D+ GR G + ++ + MP Q++ V W +
Sbjct: 371 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVSWNVM 429
Query: 409 LSASKVHHNLEIGEIAAKNLFQ 430
+S +H G + A NLFQ
Sbjct: 430 ISVYGMHG---FG-MDAVNLFQ 447
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/570 (38%), Positives = 339/570 (59%), Gaps = 9/570 (1%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEPGAFDFN 100
+L + VH ++ G +P+ A+ L+ C L GS+D+AC +F + E F +N
Sbjct: 88 NSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDL---GSVDHACKVFDETREKTIFVWN 144
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA----KLQALKEGMQIHGH 156
+ R E+ L LY +M G+ + FT+ + KAC + L++G +IH H
Sbjct: 145 AIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAH 204
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ + G+E + V +L+++Y + V +AS++F M K++ SWSA+IA +A N + +
Sbjct: 205 ILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKA 264
Query: 217 LKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+LF M E C P +VSVL AC L AL+ GK H ++R + V +LI
Sbjct: 265 LELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLI 324
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY +CG + G +F M + ++++ +IS MHG GK+A+ IF M+ G+ P +
Sbjct: 325 TMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYI 384
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++ VL ACSHAGLV E + F+ M +YRI P ++HY C+VD++GRA L EA+ELIQ+
Sbjct: 385 TFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQN 444
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
M + VW SLL + ++H N+E+ E A+ LF++ + +YVLLS++YA+++ W DV
Sbjct: 445 MDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDV 504
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
++R ++ S+GL + P S +EV RK+Y VS + +P + + + + ++K +GY
Sbjct: 505 RRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYV 564
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P + V D+DE+EK + GHS KLA+AF LI+ S+G IRI+ NLR+C DCH + K +
Sbjct: 565 PQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFV 624
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S REI++RD RFH FKDG CSC DYW
Sbjct: 625 SKFTNREILLRDVNRFHCFKDGVCSCGDYW 654
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 17/297 (5%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P TF L +C + +L +G+ +H + G + D ++ LINMY V+ A +
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW--RPEESILVS-VLSACT- 244
F + +K++ W+AI A A + L L+G+MN W P + VL AC
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMN----WIGIPSNRFTYTYVLKACVV 187
Query: 245 ---HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
+ L GK H ++R+ +V V T+L+D+Y + G + +F M DK ++
Sbjct: 188 SELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVS 247
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLE--PDDVVYVGVLSACSHAGLVNEGLLCFDR 359
+S MI+ A + +AL +F M+ E + P+ + V VL AC+ + G L
Sbjct: 248 WSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAY 307
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ L + T+ ++ + GR G + + M ++ DV+ W SL+S +H
Sbjct: 308 V-LRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM--KKRDVISWNSLISIYGMH 361
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/582 (37%), Positives = 343/582 (58%), Gaps = 6/582 (1%)
Query: 27 LRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+R E TI+ +C + + E + H + LK G ++ + + L+ C S +
Sbjct: 125 MRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALI--CMYSRRSDVKG 182
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A S++ ++ F +N +I G ++ EAL + + M + + DN T+ F C+
Sbjct: 183 AMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSH 242
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L+ L+ G+Q+H +F+ G E D FV +++I+MYGKC + A +F ++ K+V SW+AI
Sbjct: 243 LKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAI 302
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
+AA++ NG + E L F EM + P E +L++C + AL GK H + ++
Sbjct: 303 LAAYSQNGCFEEALNFFPEMEVDGLL-PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSG 361
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++IV +LI+MY K G +E +F M + +T+S MI GL+ HG G+EAL +F
Sbjct: 362 FEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQ 421
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EML P V +VGVLSAC+H G V EG +++ + I P V+HY C+V L+ +A
Sbjct: 422 EMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKA 481
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA ++S P++ + V WR+LLSA VH N +G+ A+ + Q++ Y+LLS
Sbjct: 482 GRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLS 541
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
NMYA+A+RW V KIR M + + + PG S +E+ ++ FVS+ ++HP + IYE +
Sbjct: 542 NMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQ 601
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ ++ GY PDI+ V DV++++KRE + HS+KLAIA+ L+ G+PIR+ +NLR
Sbjct: 602 ELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLR 661
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
MC DCH+ KLIS + R IIVRD RFH F DG CSC DYW
Sbjct: 662 MCVDCHSAVKLISKVTNRMIIVRDANRFHCFGDGGCSCADYW 703
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 185/394 (46%), Gaps = 19/394 (4%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH-WGSMD---YACSIF 88
+ L + KNL+ K +HAH++ N N+V +L + + D A +F
Sbjct: 30 QLLKVSADTKNLKFGKMIHAHLI----ITNQATKDNIVQVNSLINLYAKCDQIMVARILF 85
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQAL 147
+ + + L+ G+ E L L+ M + P+ + F + +C+ +
Sbjct: 86 DGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQV 145
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
EG Q HG+ K G +V+N+LI MY + V+ A +++ ++ V S++ II
Sbjct: 146 VEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGL 205
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
NG SE L++ M +E C + V+ C+HL L LG H + R + +
Sbjct: 206 LENGYPSEALEVLDRMVDE-CIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYD 264
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +++IDMY KCG + +F + K ++++ +++ + +G +EAL+ F EM
Sbjct: 265 SFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEV 324
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK---LEYRIVPTVQHYGCVVDLMGRAG 384
+GL P++ + +L++C+ + G L R+K E I+ ++++ ++G
Sbjct: 325 DGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVG----NALINMYSKSG 380
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
+ A ++ M I ++ + W +++ HH L
Sbjct: 381 SIEAAHKVFLEM-ICRDSITWSAMICGLS-HHGL 412
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/579 (38%), Positives = 336/579 (58%), Gaps = 12/579 (2%)
Query: 23 PELNLRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P+ NL K +LK C L E+ + VHAH++ F N N++ + G
Sbjct: 85 PDYNLYSK------LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNM-YAKCG 137
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+D A +F ++ + LI GF + +AL L+ +M G +P++FT +L K
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
A L G Q+H K G++ ++V ++L++MY +C ++ A F M KS S
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+A+I+ HA G L L +M K ++P SVLSAC +GAL+ GK H +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQ-RKNFQPTHFTYSSVLSACASIGALEQGKWVHAHM 316
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I++ L + +L+DMY K G ++ +F + ++++ M++G A HG GKE L
Sbjct: 317 IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETL 376
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
F +MLR G+EP+++ ++ VL+ACSH+GL++EGL F+ MK +Y++ P V HY VDL
Sbjct: 377 DRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDL 435
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GR G+L A I+ MPI+ VW +LL A ++H N+E+G AA+ F+++ H
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPR 495
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
+LLSN+YA A RW DVAK+R M G+ + P S VE+ V+ FV+ D +HP I
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIR 555
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
++ ++K GY PD S VL VD+ E+ E+L+ HS+KLA+AFAL++ GSPIRI
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+N+R+C DCH K +S + +REIIVRD RFHRF+DG+
Sbjct: 616 KNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDGS 654
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 342/573 (59%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ LK C + E +++H+ ++K + F A LV S MD A + +
Sbjct: 289 SALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDM--YSKCEMMDDARRAYDSMP 346
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +N LI G+ + + +A+ L+++MF ++ + T + K+ A LQA+K Q
Sbjct: 347 KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQ 406
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K G D +V NSL++ YGKC ++ AS IF++ + + +++++I A++ G
Sbjct: 407 IHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGD 466
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E LKL+ +M + +P+ I S+L+AC +L A + GK H I+ ++
Sbjct: 467 GEEALKLYLQMQDADI-KPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASN 525
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY KCG +E F + ++ +++S MI G A HG GKEAL +F++MLR+G+ P
Sbjct: 526 SLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPP 585
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + V VL AC+HAGLVNEG F++M++ + I PT +HY C++DL+GR+G L EA+EL
Sbjct: 586 NHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVEL 645
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ S+P + + VW +LL A+++H N+E+G+ AAK LF + +VLL+N+YA A W
Sbjct: 646 VNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMW 705
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VAK+R M + + PG S +E+ KVY F+ DRSH D IY + Q+ L
Sbjct: 706 ENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKA 765
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GYS + + +VD+ EK + L HS+KLA+AF LI G PIR+ +NLR+C DCHT+
Sbjct: 766 GYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFF 825
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K + I REIIVRD RFH FKDG+CSC DYW
Sbjct: 826 KFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 188/368 (51%), Gaps = 15/368 (4%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++HAH++K+GF +P ++LV S YA + + E +++L+ G+V+
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTL--YSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQ 59
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
EEAL ++NEM GV+ + FTFP++ KAC+ + L G ++HG GFE D FV
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+L+ MY KC ++ + +F + +++V SW+A+ + + + L E + LF EM
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
E SI + +L+AC L DLG+ HG +++ L+ +L+DMY K G +E +
Sbjct: 180 MPNEFSISI-ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F+ +A ++++ +I+G +H AL + EM G P+ L AC+ G
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGC-----VVDLMGRAGMLGEALELIQSMPIQQNDV 403
G +L ++ H +VD+ + M+ +A SMP +++ +
Sbjct: 299 FKELG------RQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDII 351
Query: 404 VWRSLLSA 411
W +L+S
Sbjct: 352 AWNALISG 359
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 186/382 (48%), Gaps = 8/382 (2%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL C L+E +K+H +LK G + F A+ LV S G ++ A ++F+ I
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDM--YSKAGEIEGAVAVFQDIAH 246
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P +N +I G V + AL L +EM G P+ FT + KACA + + G Q+
Sbjct: 247 PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQL 306
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H + K+ DLF L++MY KCE ++ A + M +K + +W+A+I+ ++ G
Sbjct: 307 HSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDH 366
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ + LF +M +E ++ L +VL + L A+ + K H I++ + V S
Sbjct: 367 LDAVSLFSKMFSEDI-DFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINS 425
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+D Y KC +++ +F + + Y+ MI+ + +G G+EAL ++ +M ++PD
Sbjct: 426 LLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPD 485
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ +L+AC++ +G +++ + + +V++ + G + +A
Sbjct: 486 PFICSSLLNACANLSAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAF 544
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
+P + V W +++ H
Sbjct: 545 SEIP-NRGIVSWSAMIGGYAQH 565
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 135/270 (50%), Gaps = 13/270 (4%)
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
M++H H+ K GF D ++N L+ +Y KC + +A + + + V SWS++++ + N
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 211 GLWSECLKLFGEMN--NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G E L +F EM KC E SVL AC+ L++G+ HG + +
Sbjct: 61 GFVEEALLVFNEMCLLGVKC---NEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDG 117
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +L+ MY KCG L+ LF + ++ ++++ + S EA+ +F EM+R
Sbjct: 118 FVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRS 177
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY--GCVVDLMGRAGML 386
G+ P++ +L+AC AGL EG L L ++ + + +VD+ +AG +
Sbjct: 178 GIMPNEFSISIILNAC--AGL-QEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEI 234
Query: 387 GEALELIQSMPIQQNDVV-WRSLLSASKVH 415
A+ + Q I DVV W ++++ +H
Sbjct: 235 EGAVAVFQD--IAHPDVVSWNAIIAGCVLH 262
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/558 (39%), Positives = 322/558 (57%), Gaps = 36/558 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +DY+ ++F + P F + +I G E+AL Y +M +GVEP+ FTF ++
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSIL 82
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
K C ++ G +H K+GF+ DL+V+ L+++Y + V A +F M +KS+
Sbjct: 83 KLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 138
Query: 199 S-------------------------------WSAIIAAHASNGLWSECLKLFGEMNNEK 227
S W+ +I + NG+ +E L LF M K
Sbjct: 139 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 198
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P E ++SVLSAC LGAL+ G+ H + N NV V T+L+DMY KCG LE
Sbjct: 199 A-KPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 257
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F + DK + ++ MI G AM G +EAL +F M R GL P ++ ++G+LSAC H+
Sbjct: 258 RLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHS 317
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G V EG F++MK EY I P ++HYGC+V+L+GRAG + +A EL+++M I+ + V+W +
Sbjct: 318 GWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGT 377
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A ++H + +GE + L N + Y+LLSN+YA W VA++RT M G+
Sbjct: 378 LLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGV 437
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PG S +EV KV++F++ +HP IY M+ ++ LK GY+P VL D+ E
Sbjct: 438 KKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 497
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
EK L+ HS+KLAIAF LI+ G+ I+I +NLR+C DCH TKLIS I R+I+VRD
Sbjct: 498 TEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRD 557
Query: 588 RKRFHRFKDGTCSCRDYW 605
R RFH F +G+CSC DYW
Sbjct: 558 RNRFHHFVNGSCSCGDYW 575
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 42/267 (15%)
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
Y +++++ A+F + SV W+AII HA GL + L + +M + P
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGV-EPNAFT 77
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG------------- 282
S+L C ++ GK H ++ ++ V T L+D+Y + G
Sbjct: 78 FSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133
Query: 283 ------------C------LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
C L+ LF M ++ + ++VMI G +G EAL +F
Sbjct: 134 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 193
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRA 383
ML+ +P++V + VLSAC G + G +E + H G +VD+ +
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY--IENNGIQFNVHVGTALVDMYSKC 251
Query: 384 GMLGEALELIQSMPIQQNDVV-WRSLL 409
G L +A + I DVV W S++
Sbjct: 252 GSLEDARLVFDK--IDDKDVVAWNSMI 276
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 30 KEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS 86
E L++L C L E + VH+++ G +N + LV S GS++ A
Sbjct: 202 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDM--YSKCGSLEDARL 259
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F +ID+ +N++I G+ +EAL L+ M G+ P N TF + AC
Sbjct: 260 VFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGW 319
Query: 147 LKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAII 204
+ EG I + + G E + ++N+ G+ VE A + K M+ + W ++
Sbjct: 320 VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 379
Query: 205 AA---HASNGLWSECLKLFGEMN 224
A H L + ++L + N
Sbjct: 380 GACRLHGKIALGEKIVELLVDQN 402
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y G L+ + LF + ++ +I G A+ G ++AL+ +++ML +G+EP+ +
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 338 VGVLSACS-------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+L C H+ V G FD L R ++D+ R G + A
Sbjct: 79 SSILKLCPIEPGKALHSQAVKLG---FDS-DLYVRT--------GLLDVYARGGDVVSAQ 126
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
+L +MP +++ V ++L+ H L+ AA+ LF
Sbjct: 127 QLFDTMP-EKSLVSLTAMLTCYAKHGELD----AARVLF 160
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 341/610 (55%), Gaps = 29/610 (4%)
Query: 14 TQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC 73
T+P+ P + + +++L+ CK+ + ++A +++ +PF L+ C
Sbjct: 23 TKPKNTPN--------RRRHFISLLQNCKHNNQIPPIYAKIIRNHHHQDPFVVFELLRVC 74
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
S+ S+ YA IF P + + LI G V + + + LY +M + PD++
Sbjct: 75 --SNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYA 132
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
++ KAC ALKEG ++H V K+G + ++ LI +YGKC E A +F +M
Sbjct: 133 VTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMP 192
Query: 194 QKSVAS------------------WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
++ V + W+A+I NG + L++F M E P E
Sbjct: 193 ERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVM-PNEVT 251
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+V VLSAC+ LGAL LG+ + ++ LN V +LI+MY +CG +++ +F M
Sbjct: 252 IVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMK 311
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+K +TY+ MI G A+HG+ EA+ +F ++++G P V +VGVL+ACSH GL G
Sbjct: 312 EKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFE 371
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M +Y I P ++HYGC+VDL+GR G L EA I+ M + + V+ +LLSA K+H
Sbjct: 372 IFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIH 431
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
NLE+ E AK+L + Y+LLSN Y+ + +W + A++RT M +G+ + PG S
Sbjct: 432 GNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSS 491
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+EV ++++F+ D HP + IY+ + ++ L+ EGY+P VL D+++ EK L
Sbjct: 492 IEVNNEIHEFLLGDLRHPQKEKIYKKLEELNQILRLEGYTPATEVVLHDIEKSEKEWALA 551
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS++LAI + LI + +R+ +NLR+CNDCH KLIS I R+I+VRDR RFH F+
Sbjct: 552 IHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITRRKIVVRDRNRFHHFE 611
Query: 596 DGTCSCRDYW 605
+G CSC DYW
Sbjct: 612 NGVCSCGDYW 621
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/514 (41%), Positives = 312/514 (60%), Gaps = 3/514 (0%)
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
EP +N L+ GF + + + AL + M G++P+ T AC +++ LK G +
Sbjct: 461 EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IHG+V + E V ++LI+MY C+ +E A ++F ++ + V W++II+A A +G
Sbjct: 521 IHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGR 580
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVE 271
L L EMN +VS L AC+ L AL GK H +IR + N I+
Sbjct: 581 SVNALDLLREMNLSNV-EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFIL- 638
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
SLIDMY +CG ++K +F +M + ++++VMIS MHG G +A+++F + GL+
Sbjct: 639 NSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLK 698
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + + +LSACSH+GL+ EG F MK EY + P V+ Y C+VDL+ RAG E LE
Sbjct: 699 PNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLE 758
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+ MP + N VW SLL A ++H N ++ E AA+ LF++ +YVL++N+Y+ A R
Sbjct: 759 FIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGR 818
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W D AKIR M +G+ + PG S +EV RK++ FV D SHP + I + + + +K
Sbjct: 819 WEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKE 878
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD + VL+DVDEDEK L GHS+K+A+AF LI + G+P+RI +NLR+C DCH+
Sbjct: 879 IGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCGDCHSA 938
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS + +R+II+RD RFH F DG CSC DYW
Sbjct: 939 TKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 197/439 (44%), Gaps = 97/439 (22%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECL----TILKTCKNLEEFK---KVHAH 53
+ ++L S+ LT P+E C+ +IL+ C+ L + +VHA
Sbjct: 70 LNNAAMLLSSMDLTNPDE---------------CIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 54 VLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
++ G F S L+ G ++ A +F ++ E F + ++ + ++E
Sbjct: 115 LVVNGVDVCEFLGSRLLEV--YCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYE 172
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
E + L+ M GV PD+F FP +FKAC++L+ + G ++ ++ +GFE + V+ S++
Sbjct: 173 ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSIL 232
Query: 174 NMYGKCEKVEFASAIFKQMDQKSV-----------------------------------A 198
+M+ KC +++ A F++++ K V
Sbjct: 233 DMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV 292
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE-------------------------- 232
+W+AII+ +A +G + E K F EM K ++P
Sbjct: 293 TWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRK 352
Query: 233 --------ESILV-SVLSACTHLGALDLGKCTHGSLIRNISAL--NVIVETSLIDMYVKC 281
SI + S +SACT+L L G+ HG I+ + L +++V SL+D Y KC
Sbjct: 353 MVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK-VEELDSDLLVGNSLVDYYAKC 411
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
+E F M+ ++++ M++G A+ G +EA+ + SEM +G+EPD + + G++
Sbjct: 412 RSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLV 471
Query: 342 SACSHAGLVNEGLLCFDRM 360
+ + G L F RM
Sbjct: 472 TGFTQYGDGKAALEFFQRM 490
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 182/401 (45%), Gaps = 44/401 (10%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ ++ + C KL L+ G Q+H + G + F+ + L+ +Y + VE A +F +M
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+++V SW+AI+ + G + E +KLF M NE RP+ + V AC+ L +GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV-RPDHFVFPKVFKACSELKNYRVGK 210
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
+ ++ N V+ S++DM++KCG ++ F + K +++M+SG G
Sbjct: 211 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 270
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+ K+AL S+M G++PD V + ++S + +G E F M P V +
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330
Query: 374 GCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSA----SKVHHNLEIGEIAAK 426
++ + G EAL + + M ++ N + S +SA S + H EI
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI------ 384
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
+ + I +L+ N +Y AK R+ VEVAR+ + +
Sbjct: 385 HGYCIKVEELDSDLLVGNSLV---DYY--AKCRS---------------VEVARRKFGMI 424
Query: 487 SQDRSHPAWDNI---------YEMIHQMEWQLKFEGYSPDI 518
Q +W+ + +E ++ ++KF+G PDI
Sbjct: 425 KQT-DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 210 NGLWSECLKLFGEMNNEKCWRPEE--SILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
NG+ + L M+ P+E I S+L C L L LG H L+ N +
Sbjct: 67 NGVLNNAAMLLSSMD---LTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVC 123
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ + L+++Y + GC+E +F M+++ +++ ++ G +E + +F M+
Sbjct: 124 EFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVN 183
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
EG+ PD V+ V ACS G +D M
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/526 (39%), Positives = 317/526 (60%), Gaps = 1/526 (0%)
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S D IF + E +NT+I G + +EE L + EM ++PD+FT ++
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
A+ + G +IHG + G + D++V +SLI+MY KC +V + +F + ++ S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W++IIA NGL+ E L+ F +M K +P+ S++ AC HL L LGK HG +
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKI-KPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
RN N+ + +SL+DMY KCG + +F M + ++++ MI G A+HGQ +A+
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F +M EG++P+ V ++ VL+ACSH GLV+E F+ M ++ I P V+HY V DL
Sbjct: 427 ELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDL 486
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG L EA + I M I +W +LLSA +VH N+++ E A + +++ ++ Y
Sbjct: 487 LGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAY 546
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
+LL+N+Y+ A+RW + AK R M G+ ++P S +EV KVY F++ D SHP ++ I
Sbjct: 547 ILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIR 606
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
E + + ++ EGY PD S+V DV+E++K+ + HS++LAI F +I+ G IR+
Sbjct: 607 EAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVT 666
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCHT TK IS I REI+VRD RFH FK+GTCSC DYW
Sbjct: 667 KNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 73/439 (16%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+ K+ + +++HA VLK F + + SH + + +F I P A +
Sbjct: 18 SIKSRSQAQQLHAQVLK---FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAW 74
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
++IR + ++L + M G+ PD+ FP++ K+CA L L G +HG++ +
Sbjct: 75 KSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIR 134
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFAS--------------------------------A 187
VG + DL+ N+L+NMY K +E +
Sbjct: 135 VGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRK 194
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF+ M +K + SW+ IIA +A NGL+ E L++ EM +P+ L SVL
Sbjct: 195 IFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL-KPDSFTLSSVLPLIAENV 253
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+ GK HG IR ++ V +SLIDMY KC + +F ++ ++ ++++ +I+
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH--------------------- 346
G +G E L F +ML ++P + ++ AC+H
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 373
Query: 347 -----AGLVNEGLLC---------FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ LV+ C FDRM+L + T GC L G+A E E
Sbjct: 374 NIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA--LHGQAPDAIELFEQ 431
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+++ I+ N V + ++L+A
Sbjct: 432 METEGIKPNHVAFMAVLTA 450
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+I+ C +L K++H ++ + GF N F AS+LV A G++ A IF ++
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA--KCGNIRTAKQIFDRMR 402
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
+ +I G + +A+ L+ +M G++P++ F A+ AC+
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/607 (38%), Positives = 349/607 (57%), Gaps = 43/607 (7%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ 90
++K LEE K H V+K + F ++L+ A C G + +F
Sbjct: 142 LIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKC-----GELGLGYRVFVN 196
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
I +N++I FV+ EEAL L+ EM + V+P+ T + ACAK + G
Sbjct: 197 IPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV------------- 197
+H ++ + L + N++++MY KC VE A +F +M +K +
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 198 ------------------ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
A+W+A+I+A+ G E L+LF E+ K +P+E LVS
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
LSAC LGA+DLG H + + LN + TSLIDMY KCG L+K L +F + K
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDV 436
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
+S MI+GLAMHG GK+A+++FS+M + ++P+ V + +L ACSH GLV EG F++
Sbjct: 437 FVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 496
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M+L Y ++P V+HY C+VD++GRAG+L EA+ELI+ MP+ VW +LL A +H N+
Sbjct: 497 MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV 556
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+ E A L ++ + YVLLSN+YA+A +W V+ +R M GL + PG S +EV
Sbjct: 557 LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHS 538
V++F+ D SHP+ IY + ++ +L+ GY P+ S +L+ V+E++ +E+ L HS
Sbjct: 617 GIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHS 676
Query: 539 QKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+KLAIAF LI Q PIRI +NLR+C DCH+ KL+S +Y+REI++RDR RFH F++G
Sbjct: 677 EKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGH 736
Query: 599 CSCRDYW 605
CSC DYW
Sbjct: 737 CSCMDYW 743
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 217/441 (49%), Gaps = 50/441 (11%)
Query: 16 PEEPPKGPELN--LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC 73
P P LN L+++ C ++ K++HA +L+ G F++PF AS L+
Sbjct: 18 PTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAA 77
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNF 132
ALS + S+DYA +F QI P + +NTLIR + ++L ++ M + + PD F
Sbjct: 78 ALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKF 137
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
TFP L KA ++L+ L G HG V KV D+F+ NSLI+ Y KC ++ +F +
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
++ V SW+++I A G E L+LF EM + +P +V VLSAC + G
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNV-KPNGITMVGVLSACAKKSDFEFG 256
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ H + RN ++ + +++DMY KCG +E LF M +K ++++ M+ G A
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 313 G-----QG--------------------------KEALSIFSEM-LREGLEPDDVVYVGV 340
G QG KEAL +F E+ L + +PD+V V
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 341 LSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
LSAC+ G ++ G + MKL + + ++D+ + G L +AL + S
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS------LIDMYCKCGDLQKALMVFHS 430
Query: 396 MPIQQNDV-VWRSLLSASKVH 415
+++ DV VW ++++ +H
Sbjct: 431 --VERKDVFVWSAMIAGLAMH 449
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/588 (37%), Positives = 342/588 (58%), Gaps = 32/588 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV-----------------------------ATCALSHW 78
++++ +LK+GF + F S LV L
Sbjct: 158 RQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRC 217
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ + +F + E + + +I G ++ EAL ++ EM G D FTF ++
Sbjct: 218 GMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVL 277
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L AL EG QIH +V + + ++FV ++L++MY KC ++ A +FK+M QK+V
Sbjct: 278 TACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVI 337
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH-G 257
SW+A++ + NG E +K+F EM P++ L SV+S+C +L +L+ G H
Sbjct: 338 SWTAMLVGYGQNGFSEEAVKIFFEMQRNGV-EPDDFTLGSVISSCANLASLEEGAQFHCR 396
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+L+ + + + V +LI +Y KCG E LF M + +++++ +++G A G+ E
Sbjct: 397 ALVSGLISF-ITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANE 455
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
+ +F ML GL+PD V ++GVLSACS AGLV +GL F+ M E+ I+P V H C++
Sbjct: 456 TIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCII 515
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L EA I +MP + V W +LLS+ +VH ++EIG+ AA +L + +P+
Sbjct: 516 DLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPA 575
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLS++YA +W VA++R M K + + PG+S ++ KV+ F + D+S P
Sbjct: 576 SYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQ 635
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ +++ EGY PD+S VL DV+E EK + L HS+KLAIAF LI + G PIR
Sbjct: 636 IYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIR 695
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C DCH TK IS I +REI+VRD RFH FKDGTCSC D+W
Sbjct: 696 VIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 148/355 (41%), Gaps = 54/355 (15%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+P+ F L A KL L + H+ + +LF N+++++Y K +
Sbjct: 37 QPETFLSNNLITAYYKLGNLAYAHHVFDHIP----QPNLFSWNTILSVYSKLGLLSQMQQ 92
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF M + SW+ I+ +A+ G S+ ++++ M + ++L C+
Sbjct: 93 IFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFR 152
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVK--------------------------- 280
+DLG+ +G +++ +V V + L+DMY K
Sbjct: 153 CVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMIT 212
Query: 281 ----CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
CG +E+ LF + ++ +++++MI+GL +G +EAL +F EM G D
Sbjct: 213 GLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFT 272
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV------VDLMGRAGMLGEAL 390
+ VL+AC + EG K + V H V VD+ + + A
Sbjct: 273 FGSVLTACGSLLALGEG-------KQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAE 325
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLS 443
+ + MP Q+N + W ++L + E A K F++ N P D+ L S
Sbjct: 326 TVFKRMP-QKNVISWTAMLVG---YGQNGFSEEAVKIFFEMQRNGVEPDDFTLGS 376
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/573 (39%), Positives = 339/573 (59%), Gaps = 7/573 (1%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+LK C L +E K VH HVL F + ++L+ A GS++ A +F ++
Sbjct: 79 TLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYA--RCGSLEGARRLFDEMP 136
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ ++I G+ + +AL L+ M G EP+ FT +L K C + + G Q
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH +K G ++FV +SL++MY +C + A +F ++ K+ SW+A+IA +A G
Sbjct: 197 IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGE 256
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L LF M E +RP E ++LS+C+ +G L+ GK H L+++ L V
Sbjct: 257 GEEALALFVRMQREG-YRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGN 315
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ MY K G + +F + ++ + M+ G A HG GKEA F EM+R G+EP
Sbjct: 316 TLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEP 375
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+D+ ++ VL+ACSHA L++EG F M+ +Y I P V HY +VDL+GRAG+L +A
Sbjct: 376 NDITFLSVLTACSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLLGRAGLLDQAKSF 434
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ MPI+ +W +LL ASK+H N E+G AA+ +F+++ +P + LL+N+YA A RW
Sbjct: 435 IEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRW 494
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DVAK+R M G+ + P S VEV V+ FV+ D +HP + I++M ++ ++K
Sbjct: 495 EDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQKIKEI 554
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD S VL VD+ EK L+ HS+KLA++FAL++ GS IRI +N+R+C DCH+
Sbjct: 555 GYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCGDCHSAI 614
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S++ +REIIVRD RFH F DG CSC DYW
Sbjct: 615 KYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 130/227 (57%), Gaps = 1/227 (0%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+EPD + L K C +L LKEG +H HV F+ DL +QNSL+ MY +C +E A
Sbjct: 70 LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M + + SW+++I +A N S+ L LF M ++ P E L S++ C ++
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGA-EPNEFTLSSLVKCCGYM 188
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+ + G+ H + NV V +SL+DMY +CG L + + +F + K +++++ +I
Sbjct: 189 ASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALI 248
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+G A G+G+EAL++F M REG P + Y +LS+CS G + +G
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQG 295
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 345/580 (59%), Gaps = 9/580 (1%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E+ L +L+ C +L+ +K+HAHV+ G + A+ L+ CA+S GS+ YA +F Q
Sbjct: 4 EKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQ 63
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKE 149
++ P +N++IRGF + +A+ YN+M PD FTF + KAC +++A ++
Sbjct: 64 MECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERK 123
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
++HG V + G++ D+ V +L+ Y V A +F +M + + +W+A+I+ +
Sbjct: 124 CKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISCFSQ 183
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
GL E L+ + +M +E + LV ++S+C HLGAL++G H N ++
Sbjct: 184 QGLHQEALQTYNQMRSENV-DIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLY 242
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LIDMY KCG L++ + +F M K T++ MI G +HG+G EA+ F +ML
Sbjct: 243 VGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 302
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++P+ V ++G+L CSH GLV EG+ F+ M ++R+ P V+HYGC+VDL GRAG L +A
Sbjct: 303 IQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKA 362
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
LE++ S + V+WR LL + K+H N+ IGEIA L ++ + D +LL+ +YA
Sbjct: 363 LEIV-SNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGE 421
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+ VA++R + S+G +PG+S +E+ +V+KFV D+SH +YE + ++ Q
Sbjct: 422 KDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQA 481
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKG----HSQKLAIAFALIHLSQGSPIRIARNLRMC 565
F GY D S + +D E LK HS+KLAIAF L + G+ IRI +NLR+C
Sbjct: 482 SFFGYVGDES--ISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVC 539
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH++ K +SV + REIIVRDR RFH FK G CSC DYW
Sbjct: 540 RDCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/603 (37%), Positives = 346/603 (57%), Gaps = 16/603 (2%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHV--LKWGFFWNPFCASNLV 70
L +P+E P L E +++++ C L + HAH+ L+ F S L+
Sbjct: 52 LLKPKEAATLPREAL---EAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLL 108
Query: 71 ATCALSHWGSMDYAC------SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
A+C + + A ++F QI +P AF +N+LIR AL +Y M
Sbjct: 109 ASCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRAL-PAAGSAPALAVYRRMLR 167
Query: 125 RGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
G P++FT KACA + A EG Q+H + G +VQ L+N+Y KCE+V
Sbjct: 168 AGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVA 227
Query: 184 FASAIFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
A +F M K++ +WSA+++ ++ G+ +E L LF EM P+E +VSV+SA
Sbjct: 228 LARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGV-EPDEVTMVSVISA 286
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C GALDLGK H + R +++ + T+LIDMY KCG +E+ +F M +K +
Sbjct: 287 CAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAW 346
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
S MI G A+HG ++AL +FS ML + P++V ++GVLSAC+H+GLV +G + M+
Sbjct: 347 SAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQ- 405
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
I P++++YGC+VDL+ R+G+L +A + MP+ N V+WR+LL A K + ++I E
Sbjct: 406 NLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAE 465
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A K L ++ H+P +YVLLSN+YA +W V+ +R +M K + G S +E+ +
Sbjct: 466 SATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHL 525
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++FV D SHP I ++ +M +++ G+ P + VL DV E+EK L HS++LA
Sbjct: 526 HEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLA 585
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IA+ L+ IR+ +NLR C DCH K+IS Y REI+VRDR RFH+F G+CSC+
Sbjct: 586 IAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCK 645
Query: 603 DYW 605
D+W
Sbjct: 646 DFW 648
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 329/530 (62%), Gaps = 2/530 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G+++ A +F + E + ++I G+ +E + ++ L++EM + G+ PD FT
Sbjct: 297 SKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTIT 356
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ ACA L+ G +H ++ + + DLFV N+L++MY KC + A ++F +M K
Sbjct: 357 TILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK 416
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ +I ++ N L +E L LF EM +P + +L AC L AL+ G+
Sbjct: 417 DIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS--KPNSITMACILPACASLAALERGQEI 474
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN +L+ V +L+DMY+KCG L LF M+ +K ++++VMI+G MHG G
Sbjct: 475 HGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYG 534
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA++ F+EM G+EPD+V ++ +L ACSH+GL++EG F+ M+ I P +HY C
Sbjct: 535 SEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYAC 594
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+ RAG L +A + I+ MPI+ + +W +LL +++H++++ E A+++F++ +
Sbjct: 595 IVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPEN 654
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVLL+N+YA A++W +V K+R + +GL ++PG S +E+ KV+ FV+ D SHP
Sbjct: 655 TGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLA 714
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ I ++ + ++K EG+ P + L D+ EK L GHS+K+A+AF ++ L G
Sbjct: 715 NKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKT 774
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+R+ +NLR+C DCH K +S + +R+II+RD RFH FKDG+CSCR +W
Sbjct: 775 VRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 178/372 (47%), Gaps = 15/372 (4%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
++ A +F ++ + +N++I G+V E+ L L+ +M G+ D T ++
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAG 260
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C+ L G +HG+ K F +L + N L++MY K + A +F+ M ++SV SW
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+++IA +A GL ++LF EM E P+ + ++L AC G L+ GK H +
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGI-SPDIFTITTILHACACTGLLENGKDVHNYIK 379
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
N ++ V +L+DMY KCG + +F M K ++++ MI G + + EAL+
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL-----LCFDRMKLEYRIVPTVQHYGC 375
+F EM + +P+ + +L AC+ + G + + L+ +
Sbjct: 440 LFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA------NA 492
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD+ + G LG A L +P + D+V +++ A H IAA N + +
Sbjct: 493 LVDMYLKCGALGLARLLFDMIP--EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 436 PSDYVLLSNMYA 447
P + +S +YA
Sbjct: 551 PDEVSFISILYA 562
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 177/401 (44%), Gaps = 66/401 (16%)
Query: 63 PFCASNLVATCAL---SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
P +SNL +CA S S C I D+N I F + A+ L
Sbjct: 41 PLVSSNLYHSCATIGTSVLPSETIDCKIT---------DYNIEICRFCELGNLRRAMELI 91
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD-------------- 165
N+ + +E T+ ++ + CA L+++++G +IH + E D
Sbjct: 92 NQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTC 149
Query: 166 -----------------LFVQNSLINMYGK------------------CEKVEFASAIFK 190
+F+ N L+N Y K +VE A +F
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFD 209
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
++ + V SW+++I+ + SNGL + L LF +M + + +VSV++ C++ G L
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGI-NTDLATMVSVVAGCSNTGMLL 268
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
LG+ HG I+ + + L+DMY K G L + +F M ++ ++++ MI+G A
Sbjct: 269 LGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYA 328
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
G ++ +F EM +EG+ PD +L AC+ GL+ G + +K E ++ +
Sbjct: 329 REGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK-ENKMQSDL 387
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G +G+A + M + ++ V W +++
Sbjct: 388 FVSNALMDMYAKCGSMGDAHSVFSEMQV-KDIVSWNTMIGG 427
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL C +L E +++H H+L+ GF + A+ LV G++ A +F I E
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDM--YLKCGALGLARLLFDMIPE 515
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ +I G+ EA+ +NEM G+EPD +F ++ AC+ L EG
Sbjct: 516 KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 346/585 (59%), Gaps = 13/585 (2%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS--MDYACSIF 88
+ L+ L C +L ++HA +K G +P + L+ C G + YA +F
Sbjct: 25 QHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVF 84
Query: 89 RQIDEPG-AFDFNTLIRGFVKEVEFEEA-----LFLYNEMFERGVEPDNFTFPALFKACA 142
++ +P A +NTL+RG+ + + + ++ M E GV PD +TF +L KACA
Sbjct: 85 DRVTQPSDAVWYNTLLRGYARSSSSSSSSSAAAVRVFVRMLEEGVAPDTYTFVSLLKACA 144
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+A + G Q H K+G +V+ +LINMY +C A F + D V S++A
Sbjct: 145 AARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYAECGDARAARVTFGRADGDCVVSYNA 204
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+IAA + E L LF EM K P ++SVLSAC LGAL LG+ H +R
Sbjct: 205 MIAAAVRSSRPGEALVLFREMQ-AKGLNPTPVTVISVLSACALLGALQLGRWLH-DYVRK 262
Query: 263 ISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ +++ V T+L+DMY KCG LE + +F+ M + + +SVMI A HG G+EA+S+
Sbjct: 263 LGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANHGYGREAISL 322
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM ++G++PDD+ ++G+L ACSH+GLV+EGL FD MK ++ IVP ++HYGCV DL+
Sbjct: 323 FEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMK-DHGIVPGIKHYGCVTDLLA 381
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
R+G L A + I +PI ++WR+LLSA H ++E+G+ + + +++ H DYV+
Sbjct: 382 RSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVI 441
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
SN+ A W ++ ++R M+ KG+ + PG S +E+ V++F + D HP +M
Sbjct: 442 FSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVHEFFAGDGRHPKSQEARKM 501
Query: 502 IHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ ++ QLK GY PD S V ++ E+EK LK HS+KLAIAF L++ + G+ +R+ +
Sbjct: 502 VDEVIDQLKLVGYIPDTSHVFHVEMGEEEKAISLKYHSEKLAIAFGLLNTAPGATLRVVK 561
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH+ K +S+++ R II+RD RFH F+ G CSC DYW
Sbjct: 562 NLRVCPDCHSMAKFVSMVFNRRIILRDLNRFHHFERGICSCGDYW 606
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/603 (37%), Positives = 346/603 (57%), Gaps = 16/603 (2%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHV--LKWGFFWNPFCASNLV 70
L +P+E P L E +++++ C L + HAH+ L+ F S L+
Sbjct: 3 LLKPKEAATLPREAL---EAHIVSLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLL 59
Query: 71 ATCALSHWGSMDYAC------SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
A+C + + A ++F QI +P AF +N+LIR AL +Y M
Sbjct: 60 ASCVSAPAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRAL-PAAGSAPALAVYRRMLR 118
Query: 125 RGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
G P++FT KACA + A EG Q+H + G +VQ L+N+Y KCE+V
Sbjct: 119 AGSPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVA 178
Query: 184 FASAIFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
A +F M K++ +WSA+++ ++ G+ +E L LF EM P+E +VSV+SA
Sbjct: 179 LARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGV-EPDEVTMVSVISA 237
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C GALDLGK H + R +++ + T+LIDMY KCG +E+ +F M +K +
Sbjct: 238 CAKAGALDLGKWVHAYIDRKGITVDLELSTALIDMYAKCGLIERARGVFDAMVEKDTKAW 297
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
S MI G A+HG ++AL +FS ML + P++V ++GVLSAC+H+GLV +G + M+
Sbjct: 298 SAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQ- 356
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
I P++++YGC+VDL+ R+G+L +A + MP+ N V+WR+LL A K + ++I E
Sbjct: 357 NLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAE 416
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A K L ++ H+P +YVLLSN+YA +W V+ +R +M K + G S +E+ +
Sbjct: 417 SATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRSSIEINGHL 476
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++FV D SHP I ++ +M +++ G+ P + VL DV E+EK L HS++LA
Sbjct: 477 HEFVVSDDSHPEIREIRLVLREMADRVRRAGHKPWTAAVLHDVGEEEKEAALCQHSERLA 536
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IA+ L+ IR+ +NLR C DCH K+IS Y REI+VRDR RFH+F G+CSC+
Sbjct: 537 IAYGLLKTRAPHVIRVVKNLRFCLDCHEVAKIISKAYNREIVVRDRVRFHKFMGGSCSCK 596
Query: 603 DYW 605
D+W
Sbjct: 597 DFW 599
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/573 (37%), Positives = 333/573 (58%), Gaps = 6/573 (1%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L CKN LE +++H +++ G + + L+ GS+ A +F +
Sbjct: 592 SVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINM--YIRCGSLQDAYEVFHSLR 649
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I GF + E +A L+ +M G +P TF ++ KAC L EG +
Sbjct: 650 HRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKK 709
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+ H+ G+E D V N+LI+ Y K + A +F +M + + SW+ +IA +A NGL
Sbjct: 710 VIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGL 769
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
L+ +M + + S VS+L+AC+ AL+ GK H +++ +V V
Sbjct: 770 GGTALQFAYQMQEQGVVLNKFS-FVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGA 828
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI MY KCG LE+ +F +K +T++ MI+ A HG +AL F+ M +EG++P
Sbjct: 829 ALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKP 888
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +LSAC+H+GLV EG F ++ ++ + PT++HYGC+V L+GRAG EA L
Sbjct: 889 DGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETL 948
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I MP + VW +LL A ++H N+ + E AA N ++N+ +P+ YVLLSN+YA A RW
Sbjct: 949 INQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRW 1008
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DVAKIR M +G+ + PG S +EV +++F++ DRSHP IYE + ++ +++
Sbjct: 1009 DDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERA 1068
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GYSPD VL ++D++ + L HS++LAIA+ L+ G+PIRI +NLR+C DCHT +
Sbjct: 1069 GYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTAS 1128
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + REII RD RFH FK+G CSC D+W
Sbjct: 1129 KFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 191/381 (50%), Gaps = 10/381 (2%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L++L C K L + +H+H+ + G + ++L++ A G + A +F +
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA--RCGDLPRARELFNTM 446
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N +I G+ + + EA+ LY +M GV+P TF L AC A +G
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH + + G + + + N+L+NMY +C + A +F+ + + SW+++IA HA +G
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ KLF EM E P++ SVL C + AL+LG+ H +I + L+V +
Sbjct: 567 SYEAAYKLFLEMKKEGL-EPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLG 625
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI+MY++CG L+ +F + + ++++ MI G A G+ ++A +F +M +G +
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFK 685
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P + +L AC + ++EG + Y + V + ++ ++G + +A
Sbjct: 686 PVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDAR 743
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
++ MP ++ + W +++
Sbjct: 744 KVFDKMP-NRDIMSWNKMIAG 763
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 189/373 (50%), Gaps = 11/373 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQIDEPGAFD 98
++L E K++HA +++ G + F ++ N+ C S+ A +F ++
Sbjct: 96 RSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCR-----SVSDAHQVFLKMPRRDVIS 150
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N+LI + ++ ++A L+ EM G P T+ ++ AC L+ G +IH +
Sbjct: 151 WNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKII 210
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+ G++ D VQNSL+NMYGKCE + A +F + ++ V S++ ++ +A EC+
Sbjct: 211 EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIG 270
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
LFG+M++E P++ +++L A T LD GK H + ++ V T+L M+
Sbjct: 271 LFGQMSSEGI-PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMF 329
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
V+CG + AD+ + Y+ +I+ LA HG +EA + +M +G+ + Y+
Sbjct: 330 VRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYL 389
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
VL+ACS + + G L + E VQ ++ + R G L A EL +MP
Sbjct: 390 SVLNACSTSKALGAGELIHSHIS-EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP- 447
Query: 399 QQNDVVWRSLLSA 411
+++ + W ++++
Sbjct: 448 KRDLISWNAIIAG 460
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 5/377 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L T L+E K++H + G + + L G + A +
Sbjct: 291 LDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATM--FVRCGDVAGAKQALEAFADR 348
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N LI + +EEA Y +M GV + T+ ++ AC+ +AL G IH
Sbjct: 349 DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIH 408
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ +VG D+ + NSLI+MY +C + A +F M ++ + SW+AIIA +A
Sbjct: 409 SHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRG 468
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E +KL+ +M +E +P + +LSACT+ A GK H ++R+ N + +L
Sbjct: 469 EAMKLYKQMQSEGV-KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
++MY +CG + + +F + ++++ MI+G A HG + A +F EM +EGLEPD
Sbjct: 528 MNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDK 587
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ + VL C + + G + +E + V ++++ R G L +A E+
Sbjct: 588 ITFASVLVGCKNPEALELGRQ-IHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFH 646
Query: 395 SMPIQQNDVVWRSLLSA 411
S+ +N + W +++
Sbjct: 647 SLR-HRNVMSWTAMIGG 662
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 166/367 (45%), Gaps = 39/367 (10%)
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
L N R E + + L + C + ++L E +IH + + G D+F+ N LINMY
Sbjct: 69 LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
KC V A +F +M ++ V SW+++I+ +A G + +LF EM + P + +
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAG-FIPSKITYI 187
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S+L+AC L+ GK H +I + V+ SL++MY KC L +F + +
Sbjct: 188 SILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR 247
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------H 346
++Y+ M+ A +E + +F +M EG+ PD V Y+ +L A + H
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIH 307
Query: 347 AGLVNEGL---------------LCFD----RMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
VNEGL C D + LE V Y ++ + + G
Sbjct: 308 KLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYE 367
Query: 388 EALE---LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL--- 441
EA E ++S + N + S+L+A L GE+ ++ ++ H SD +
Sbjct: 368 EAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG--HSSDVQIGNS 425
Query: 442 LSNMYAR 448
L +MYAR
Sbjct: 426 LISMYAR 432
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/635 (37%), Positives = 344/635 (54%), Gaps = 65/635 (10%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCA----------------L 75
L + + LE KKVH+ ++K G N ++ N+ A C +
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212
Query: 76 SHW----------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
S W G MD A + F Q+ E +N++I G+ + AL ++++M
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272
Query: 126 G-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ PD FT ++ ACA L+ L G QIH H+ GF+ V N+LI+MY +C VE
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 185 A---------------------------------SAIFKQMDQKSVASWSAIIAAHASNG 211
A IF + + V +W+A+I + +G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHG 392
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+ E + LF M E+ RP L ++LS + L +L GK HGS +++ +V V
Sbjct: 393 LYGEAINLFRSMVGEE-QRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVS 451
Query: 272 TSLIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LI MY K G + F ++ ++ ++++ MI LA HG +EAL +F ML EGL
Sbjct: 452 NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD + YVGV SAC+HAGLVN+G FD MK +I+PT+ HY C+VDL GRAG+L EA
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
E I+ MPI+ + V W SLLSA +V+ N+++G++AA+ L + + Y L+N+Y+
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W + AKIR M + + GFS +EV KV+ F +D HP + IY + ++ ++K
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIK 691
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD + VL D++E+ K + L+ HS+KLAIAF LI + +RI +NLR+CNDCHT
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + REIIVRD RFH FKDG CSCRDYW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 177/429 (41%), Gaps = 72/429 (16%)
Query: 55 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE 114
L+ F WN + A + G MD +C F ++ + + + T+I G+ ++ +
Sbjct: 77 LRTAFSWNTVLS-------AYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHK 129
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
A+ + EM G+EP FT + + A + L+ G ++H + K+G ++ V NSL+N
Sbjct: 130 AIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLN 189
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG------------------LWS-- 214
MY KC A +F +M K ++SW+A+IA H G W+
Sbjct: 190 MYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249
Query: 215 -----------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
L +F +M + P+ L SVLSAC +L L +G+ H ++
Sbjct: 250 ISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTG 309
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCL--------------------------------- 290
++ IV +LI MY +CG +E L
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNI 369
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + D+ + ++ MI G HG EA+++F M+ E P+ +LS S +
Sbjct: 370 FDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASL 429
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
G ++ + +V ++ + +AG + A + +++ V W S++
Sbjct: 430 GHGKQIHGS-AVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMII 488
Query: 411 ASKVHHNLE 419
A H + E
Sbjct: 489 ALAQHGHAE 497
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 64/257 (24%)
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG- 211
+H V K G +++ N+L+N+Y K A +F +M ++ SW+ +++A+A G
Sbjct: 36 VHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGD 95
Query: 212 -----------------LWS-------------ECLKLFGEMNNEKCWRPEESILVSVLS 241
W+ + +++ GEM E P + L +VL+
Sbjct: 96 MDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGI-EPSQFTLTNVLA 154
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC-------------------- 281
+ L+ GK H +++ NV V SL++MY KC
Sbjct: 155 SVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISS 214
Query: 282 -----------GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG- 329
G ++ + F MA++ +T++ MISG G AL +FS+MLR+
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSM 274
Query: 330 LEPDDVVYVGVLSACSH 346
L PD VLSAC++
Sbjct: 275 LSPDRFTLASVLSACAN 291
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 336/578 (58%), Gaps = 1/578 (0%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
+ + ++++K+C + + ++HAH++ +P + + A + + + Y+ +F
Sbjct: 25 FEREPLISLIKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLF 84
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ P +N ++R + E L++Y +M +GV D + K+C KL +L
Sbjct: 85 DLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLL 144
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G+QIH +F G + D + S++++Y C K E A +F ++ QK V +W+ +I+
Sbjct: 145 FGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLT 204
Query: 209 SNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
N + L LF M + +P++ + +L AC L AL+ G+ HG + ++
Sbjct: 205 RNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTE 264
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ SLI MY +CG ++K +F M +K +++S MISGL+M+G G+EA+ F EM +
Sbjct: 265 SNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQK 324
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G+EP D + VLSACSH GLV+EG+ FDRM+ E+ I P V HYGC+VDL+GRAGML
Sbjct: 325 NGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLD 384
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A ELI SM ++ + +WR+LL A ++H + +GE ++L ++ S DYVLL N+Y+
Sbjct: 385 QAYELIMSMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYS 444
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
A W V ++R M KG+ +P + +E+ V++F D SHP D IY+ + ++
Sbjct: 445 SAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINK 504
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
QLK GY ++S L ++ +K L HS+KLAIAF ++ G IRIA N+R C D
Sbjct: 505 QLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMD 564
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH + K IS +Y R+++VRDR RFH F++G CSC D+W
Sbjct: 565 CHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSCNDFW 602
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/557 (40%), Positives = 330/557 (59%), Gaps = 12/557 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH HV+K GF + + S+L+ A + + A +F +N +I G+VK
Sbjct: 217 VHTHVVKSGFECDSYIVSSLIHLYA--NGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKH 274
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
VE A +++ M R D ++ + A + + E ++ F E +L
Sbjct: 275 VEMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRL----FDEMPERNLVSW 326
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
NS++ + KC VE A +F +M + V SW++++A +A G +E L LF +M
Sbjct: 327 NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV- 385
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P E+ +VS+LSAC HLGALD G H + N +N IV T+L+DMY KCG +
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M K L ++ +I+G+A+HG KEA +F EM G+EP+D+ +V +LSACSHAG+
Sbjct: 446 VFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGM 505
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V+EG D M Y I P V+HYGCV+DL+ RAG L EA+ELI +MP++ N +LL
Sbjct: 506 VDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALL 565
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
++H N E+GE+ K L + H Y+LLSN+YA A++W D K+R M G+++
Sbjct: 566 GGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 625
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDED 528
PG S++E+ V++FV+ D SHP + IYE ++++ +LK GYS D VL D++E+
Sbjct: 626 VPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEE 685
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
+K L HS+KLAIA+ L+HL IRI +NLR+C DCH KLIS +Y REIIVRDR
Sbjct: 686 DKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDR 745
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+DG CSC D+W
Sbjct: 746 NRFHHFEDGECSCLDFW 762
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 33/417 (7%)
Query: 18 EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
PP P++ L++ CK L K+VHA ++ +PF S L + ALS
Sbjct: 92 NPPSNPQI---------LSLFNPCKTLRHLKQVHAQIIT--HHNSPFQLSALASLSALSP 140
Query: 78 WGS-MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+ + + YA +IF + P +N+LIR EAL LY+ M + G++PD+ T+P
Sbjct: 141 FPTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPF 200
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ KAC + G+ +H HV K GFECD ++ +SLI++Y + + A +F +
Sbjct: 201 VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARD 260
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKC 254
V SW+A+I + + +F M + W ++++ +G +D K
Sbjct: 261 VVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWN-------TMINGYAIVGKIDEAK- 312
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
L + N++ S++ +VKCG +E LF M + ++++ M++ A G+
Sbjct: 313 ---RLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGK 369
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
EAL++F +M G++P + V +LSAC+H G +++GL + + RI
Sbjct: 370 PNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIN-DNRIEVNSIVGT 428
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQ 430
+VD+ + G + A ++ +M + DV+ W ++++ +H N++ A+ LF+
Sbjct: 429 ALVDMYAKCGKISLATQVFNAM--ESKDVLAWNTIIAGMAIHGNVK----EAQQLFK 479
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/603 (37%), Positives = 346/603 (57%), Gaps = 34/603 (5%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ + +++L + +E +++HA + G + V ALS +DYA I
Sbjct: 11 RIVKHPAISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQI 70
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE--RGVEPDNFTFPALFKACAKLQ 145
+ D+P F N++IR K E++ Y+ + G++PDN+T L +AC L
Sbjct: 71 LDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLG 130
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMY----------------------------- 176
+ G+Q+HG + GF+ D VQ LI++Y
Sbjct: 131 MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVT 190
Query: 177 --GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
+C V FA +F+ M +K +W+A+I+ +A G E L LF M E +
Sbjct: 191 ACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGV-KVNGV 249
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
++SVLSACT LGALD G+ H + RN + V + T+L+D+Y KCG ++K + +F M
Sbjct: 250 SMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGM 309
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+K T+S ++GLAM+G G++ L +FS M ++G+ P+ V +V VL CS G V+EG
Sbjct: 310 EEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 369
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
FD M+ E+ I P + HYGC+VDL RAG L +A+ +IQ MP++ + VW SLL AS++
Sbjct: 370 KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRM 429
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
+ NLE+G +A+K + ++ + + YVLLSN+YA + W +V+ +R M SKG+ + PG S
Sbjct: 430 YKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCS 489
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
++EV +V++F D+SHP ++ I + + +L+ GY D + V+ D+DE+EK + L
Sbjct: 490 VMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDAL 549
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+K AIAF ++ L PIRI +NLR+C DCH + +IS I+ REIIVRDR RFH F
Sbjct: 550 CLHSEKAAIAFGIMSLKADVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHF 609
Query: 595 KDG 597
KDG
Sbjct: 610 KDG 612
Score = 367 bits (943), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 187/483 (38%), Positives = 290/483 (60%), Gaps = 2/483 (0%)
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
E G P+ TF ++ AC +EG+ IHG V K G ++ V N+L+N+YGK +
Sbjct: 630 EVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLI 689
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
+ +F+ + K++ SW+ +I H NGL E L F M+ +P+++ ++VL C
Sbjct: 690 SSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF-NMSRWVGLKPDQATFLAVLRVC 748
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+G + L + HG ++ N + T+L+D+Y K G LE +F + + ++
Sbjct: 749 EDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWT 808
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
M++ A HG G++A+ F M+ GL PD V + +L+ACSH+GLV EG F+ M
Sbjct: 809 AMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKR 868
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
YRI P + HY C+VDLMGR+G+L +A LI+ MP++ + VW +LL A +V+ + ++G
Sbjct: 869 YRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTK 928
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAK LF++ +Y++LSN+Y+ + W D ++IR M KGL ++ G+S +E K++
Sbjct: 929 AAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIH 988
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
KFV D SHP + I + + ++ ++K E G+ VL DVDED K E + HS+K+A
Sbjct: 989 KFVVGDWSHPESEKIQKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIA 1048
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+AF L+ +S PI I +NLR+C DCH K IS+I +R II+RD KRFH F +G+CSCR
Sbjct: 1049 MAFGLLVISPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCR 1108
Query: 603 DYW 605
DYW
Sbjct: 1109 DYW 1111
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 49/329 (14%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E+ R E L+++ C N EE +H V+K G + L+ + G
Sbjct: 630 EVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKT--GD 687
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ +C +F + +NT+I ++ EE L +N G++PD TF A+ +
Sbjct: 688 LISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRV 747
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C + ++ IHG + GF + + +L+++Y K ++E +S +F ++ +W
Sbjct: 748 CEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAW 807
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A++AA+A++G + +K F E+ P+ +L+AC+H
Sbjct: 808 TAMLAAYATHGYGRDAIKHF-ELMVHYGLSPDHVTFTHLLNACSH--------------- 851
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQG 315
G +E+G F M+ + ++ YS M+ + G
Sbjct: 852 --------------------SGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLL 891
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++A + EM +EP V+ +L AC
Sbjct: 892 QDAYGLIKEM---PMEPSSGVWGALLGAC 917
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 211 GLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G +C ++ M +E +RP E +S++SAC H G + G C HG ++++ V
Sbjct: 614 GYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVK 673
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +L+++Y K G L LF ++ K ++++ MI +G +E L+ F+ G
Sbjct: 674 VVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVG 733
Query: 330 LEPDDVVYVGVLSACSHAGLVN-----EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
L+PD ++ VL C G+V GL+ F I ++DL + G
Sbjct: 734 LKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTA------LLDLYAKLG 787
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L ++ + + + + W ++L+A H
Sbjct: 788 RLEDSSTVFLEIT-SPDSMAWTAMLAAYATH 817
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/605 (37%), Positives = 346/605 (57%), Gaps = 37/605 (6%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF-RQIDE 93
L+ L+ C E K++HA +LK G +P+ + ++ C S YA +F D
Sbjct: 15 LSCLQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSS--FSSYAHDVFFNGFDR 72
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P F +N +IRG + + +L LY+ M + +TFP L KAC+ L A +E QI
Sbjct: 73 PDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQI 132
Query: 154 HGHVFKVGFECDLFVQNSLINMYG-------------------------------KCEKV 182
H H+ K G+ D++ NSLIN Y K ++
Sbjct: 133 HAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEM 192
Query: 183 EFASAIFKQMDQKSVA-SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+ A +F++M +K+ A SW+ +I+ + G+ E L+LF EM N P+ L S LS
Sbjct: 193 DMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNV-PPDNVSLASALS 251
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC+ LGAL+ GK H + + ++ ++ LIDMY KCG +E+ L +F+ M K
Sbjct: 252 ACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQV 311
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ +ISG A HG G+EA+S F EM G++P+ + + VL+ACS+ GLV EG F+ ++
Sbjct: 312 WTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIE 371
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
+Y + PT++HYGC+VDL+GRAG+L EA IQ MP++ N V+W SLL A ++H N+E+G
Sbjct: 372 RDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELG 431
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E + L +++S+H YV ++N++A ++W A+ R M +G+ + PG S + +
Sbjct: 432 EKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGT 491
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD-VDEDEKRERLKGHSQK 540
++F++ DRSH I + +L+ GY P++ +L D VD++EK + HS+K
Sbjct: 492 THEFLAGDRSHAEIQEIRTKWRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEK 551
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAI + L+ G+ IRI +NLR+C DCH LIS IY+R+I++RDR RFH FKDG CS
Sbjct: 552 LAITYGLMKTKPGTTIRIMKNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCS 611
Query: 601 CRDYW 605
C DYW
Sbjct: 612 CGDYW 616
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/581 (38%), Positives = 343/581 (59%), Gaps = 45/581 (7%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
LE+ K++HAH++K F ++ + F P A +N +
Sbjct: 90 TLEQTKQIHAHIIKTHFH------------------HALQIPLNDFPSGLSPSA-QWNFV 130
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I + K + AL +Y ++ + E DNF P++ KAC ++ + G +IHG V K G
Sbjct: 131 ITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL 190
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW----SAIIAAHASNGLWSECLK 218
+ D+FV N+L+ MYG+C VE+A +F +M ++ V SW +A++ +A G +
Sbjct: 191 DRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQ 250
Query: 219 LFGEMNNEKC--WRPEESILVSVLSACTHLGALDLG-----KCTHGSLIRN-ISALN--- 267
LF + + W ++++ C L+ G + ++ N I+ LN
Sbjct: 251 LFNGLTQKTVVSW-------TAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNKER 303
Query: 268 ----VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
I+ T+L+DMY KCG + LF + ++ +I+G AMHG G+EAL IF+
Sbjct: 304 VEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFA 363
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EM R+G++P+D+ ++G+L ACSHAGLV EG F++M + +VP ++HYGC+VDL+GRA
Sbjct: 364 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 423
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G+L EA E+I+SMPI+ N +VW +L++A ++H N ++GE+AA L +I + VL+S
Sbjct: 424 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 483
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A RW D A +R M + G+ + PG S++EV V++F+ D+SHP I EM+
Sbjct: 484 NIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLA 543
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+M +L GY PD S VL ++DE+EK L HS+KLA+AF LI + +PIRI +NLR
Sbjct: 544 EMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLR 603
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
+CNDCH TKL+S IY R IIVRDR RFH F++G CSC DY
Sbjct: 604 VCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 644
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 27/244 (11%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P P + L L++ QIH H+ K F L + + +F S +
Sbjct: 73 PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLN-----------DFPSGL 121
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
A W+ +I ++ L ++ ++ + + + SVL AC +
Sbjct: 122 ------SPSAQWNFVITSYTKRNQPRNALNVYAQLRKMD-FEVDNFMAPSVLKACGQVSW 174
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL----TYSV 304
LGK HG +++ +V V +L+ MY +C C+E +F M ++ + T +
Sbjct: 175 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTA 234
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
++ A G A +F+ + ++ + V + +++ C + + EG F RM+ E
Sbjct: 235 LLDMYAKCGHLGLARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQ-EE 289
Query: 365 RIVP 368
I P
Sbjct: 290 NIFP 293
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/590 (38%), Positives = 343/590 (58%), Gaps = 34/590 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +H V+K F + F +++L+ S G +D A +F +I E +N++I GFV
Sbjct: 151 QAIHGMVMKASFGSDLFISNSLIHF--YSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFV 208
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ EEAL L+ M P+ T + ACAK L+ G ++ + G + +L
Sbjct: 209 QGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLI 268
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS-------------------------- 201
+ N++++MY KC +E A +F +M++K + SW+
Sbjct: 269 LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRED 328
Query: 202 -----AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
A+I+++ NG E L +F E+ K +P E L S L+AC LGA+DLG H
Sbjct: 329 ITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIH 388
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ + LN + TSLIDMY KCG LEK L +F + + +S MI+GLAMHG G+
Sbjct: 389 VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGR 448
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
A+ +FS+M ++P+ V + +L ACSH+GLV+EG L F++M+ Y +VP +HY C+
Sbjct: 449 AAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACM 508
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VD++GRAG L EA+ELI+ MPI + VW +LL A +++ N+E+ E+A L + +S++
Sbjct: 509 VDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNH 568
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
YVLLSN+YA+A +W V+++R M GL + PG S +EV +++F+ D SHP
Sbjct: 569 GAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLST 628
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSP 555
IY + ++ ++K GY D S +L+ V+E+ +E L HS+KLAIA+ LI + P
Sbjct: 629 EIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRMEPSQP 688
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCH+ KLIS +Y R+I++RDR RFH F G CSC DYW
Sbjct: 689 IRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 215/418 (51%), Gaps = 48/418 (11%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
++ C N + K++HAH+L+ G F++P A+ L CALS S+DYAC +F QI P
Sbjct: 36 LIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNL 95
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKEGMQIHG 155
+ +NTLIR F + + L ++ +M P+++TFP + KA ++ +L G IHG
Sbjct: 96 YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHG 155
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
V K F DLF+ NSLI+ Y ++ A +F ++ +K + SW+++I+ G E
Sbjct: 156 MVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEE 215
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+LF M E RP +V VLSAC L+ G+ + RN +N+I+ +++
Sbjct: 216 ALQLFKRMKMENA-RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAML 274
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA------------------------- 310
DMYVKCG LE LF M +K ++++ MI G A
Sbjct: 275 DMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNA 334
Query: 311 ------MHGQGKEALSIFSEM-LREGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFD 358
+G+ KEAL+IF E+ L + +P++V L+AC+ G ++ G +
Sbjct: 335 LISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ 394
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVH 415
+KL + I + ++D+ + G L +ALE+ S +++ DV VW ++++ +H
Sbjct: 395 GIKLNFHITTS------LIDMYSKCGHLEKALEVFYS--VERRDVFVWSAMIAGLAMH 444
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 145/309 (46%), Gaps = 27/309 (8%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC-----EKVEFASA 187
T P L CA + LK Q+H H+ + G F S ++ C +++A
Sbjct: 32 TVPILIDKCANKKHLK---QLHAHMLRTGL---FFDPPSATKLFTACALSSPSSLDYACK 85
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F Q+ + ++ +W+ +I A AS+ + L +F +M +E P V+ A T +
Sbjct: 86 VFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVS 145
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+L G+ HG +++ ++ + SLI Y G L+ +F + +K ++++ MIS
Sbjct: 146 SLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS 205
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEY 364
G G +EAL +F M E P+ V VGVLSAC+ + G D R ++
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI 265
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEI 423
++ + ++D+ + G L +A L M ++ D+V W +++ ++G+
Sbjct: 266 NLILS----NAMLDMYVKCGSLEDARRLFDKM--EEKDIVSWTTMIDGYA-----KVGDY 314
Query: 424 -AAKNLFQI 431
AA+ +F +
Sbjct: 315 DAARRVFDV 323
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/602 (37%), Positives = 346/602 (57%), Gaps = 37/602 (6%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWG-FFWNPFCASNLV---ATCALSHWGSMDYACSIF 88
++L C LE + ++H + L+ G N F + LV C G + + +
Sbjct: 539 SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQAL 147
R + +N L+ G+ + ++AL L+ EM E P+ TF ++ AC + +
Sbjct: 599 RTVAV-----WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVF 653
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ IHG++ K GF D +VQN+L++MY + +VE + IF +M+++ + SW+ +I
Sbjct: 654 SDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGC 713
Query: 208 ASNGLWSECLKLFGEMNNEKC-----------------WRPEESILVSVLSACTHLGALD 250
G + + L L EM + ++P L++VL C L AL
Sbjct: 714 IVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALG 773
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
GK H ++ A++V V ++L+DMY KCGCL +F M + +T++V+I
Sbjct: 774 KGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYG 833
Query: 311 MHGQGKEALSIFSEML------REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MHG+G+EAL +F M RE + P++V Y+ + +ACSH+G+V+EGL F MK +
Sbjct: 834 MHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASH 893
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEI 423
+ P HY C+VDL+GR+G + EA ELI +MP N V W SLL A ++H ++E GEI
Sbjct: 894 GVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEI 953
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAK+LF + + S YVL+SN+Y+ A W +R +M G+ + PG S +E +V+
Sbjct: 954 AAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVH 1013
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
KF+S D SHP ++E + + +++ EGY PDIS VL +VD++EK L GHS++LAI
Sbjct: 1014 KFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAI 1073
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF L++ G+ IR+A+NLR+CNDCH TK+IS I +REII+RD +RFH F +GTCSC D
Sbjct: 1074 AFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGD 1133
Query: 604 YW 605
YW
Sbjct: 1134 YW 1135
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 190/406 (46%), Gaps = 34/406 (8%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VHA+ L+ G + + LV A G ++ A ++F D +NT+I
Sbjct: 454 KQVHAYTLRNGDL-RTYTNNALVTMYA--RLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL- 166
+ FEEAL M GV PD T ++ AC++L+ L+ G +IH + + G DL
Sbjct: 511 QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG---DLI 567
Query: 167 ---FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
FV +L++MY C++ + +F + +++VA W+A++A +A N + L+LF EM
Sbjct: 568 ENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEM 627
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+E + P + SVL AC + HG +++ + V+ +L+DMY + G
Sbjct: 628 ISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGR 687
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE------------ 331
+E +F M + ++++ MI+G + G+ +AL++ EM R E
Sbjct: 688 VEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDD 747
Query: 332 ------PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
P+ V + VL C+ + +G ++ ++ V +VD+ + G
Sbjct: 748 GGVPFKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQKLAMDVAVGSALVDMYAKCGC 806
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
L A + MPI +N + W L+ A +H E A LF+I
Sbjct: 807 LNLASRVFDQMPI-RNVITWNVLIMAYGMHGKGE----EALELFRI 847
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 123/248 (49%), Gaps = 5/248 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+R F +A+ Y M PDNF FPA+ KA A + L G QIH HVFK G
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360
Query: 162 F--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+ V NSL+NMYGKC + A +F + + SW+++IA W L L
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F M +E P LVSV AC+H+ G + LGK H +RN L +L+ MY
Sbjct: 421 FRLMLSENV-DPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRN-GDLRTYTNNALVTMY 478
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+ G + LF + K ++++ +IS L+ + + +EAL M+ +G+ PD V
Sbjct: 479 ARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLA 538
Query: 339 GVLSACSH 346
VL ACS
Sbjct: 539 SVLPACSQ 546
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 154/303 (50%), Gaps = 11/303 (3%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWG---SMDYACSIFRQIDEPGAFDFNTLIR 104
K++HAHV K+G + +S VA ++ +G + A +F I + +N++I
Sbjct: 350 KQIHAHVFKFG---HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIA 406
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ-ALKEGMQIHGHVFKVGFE 163
+ E+E +L L+ M V+P +FT ++ AC+ ++ ++ G Q+H + + G +
Sbjct: 407 TLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-D 465
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+ N+L+ MY + +V A A+F D K + SW+ +I++ + N + E L M
Sbjct: 466 LRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLM 525
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSLIDMYVKCG 282
+ RP+ L SVL AC+ L L +G+ H +RN + N V T+L+DMY C
Sbjct: 526 IVDGV-RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCK 584
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVL 341
+KG +F + + ++ +++G A + +AL +F EM+ E P+ + VL
Sbjct: 585 QPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVL 644
Query: 342 SAC 344
AC
Sbjct: 645 PAC 647
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/596 (37%), Positives = 343/596 (57%), Gaps = 37/596 (6%)
Query: 43 NLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
+++E ++HA +L+ +P + NL A + G + ++ ++F Q +P F F
Sbjct: 39 SVDEVLQIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 98
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
I ++A LY ++ + P+ FTF ++ K+C+ K G IH HV K G
Sbjct: 99 AINTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCST----KSGKLIHTHVLKFG 154
Query: 162 FECDLFVQNSLINMYGKCE-------------------------------KVEFASAIFK 190
D +V L+++Y K VE A A+F
Sbjct: 155 LGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFD 214
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+M ++ + SW+ +I ++ +G S+ L LF ++ + +P+E +V+ LSAC+ +GAL+
Sbjct: 215 RMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALE 274
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
G+ H + + LNV V T+LIDMY KCG LE+ + +F K + ++ MI+G A
Sbjct: 275 TGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYA 334
Query: 311 MHGQGKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
MHG ++AL +F EM GL+P D+ ++G L AC+HAGLVNEG+ F+ M EY I P
Sbjct: 335 MHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPK 394
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
++HYGC+V L+GRAG L A E+I++M ++ + V+W S+L + K+H +G+ A+ L
Sbjct: 395 IEHYGCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLI 454
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD 489
N + YVLLSN+YA + VAK+R M KG+ + PG S +E+ KV++F + D
Sbjct: 455 GQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGD 514
Query: 490 RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH 549
R H IY M+ +M ++K GY P+ + VL D++E EK L+ HS++LAIA+ LI
Sbjct: 515 REHLKSKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLIS 574
Query: 550 LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
GSP++I +NLR+C+DCHT TKLIS I R+I++RDR RFH F DG+CSC D+W
Sbjct: 575 TKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630
>gi|297737119|emb|CBI26320.3| unnamed protein product [Vitis vinifera]
Length = 522
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/576 (40%), Positives = 324/576 (56%), Gaps = 71/576 (12%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
L +L+ CK L+ K+VHAH++ G ++ + S ++ +T +H A SIF I
Sbjct: 13 LQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTH------ALSIFNHI 66
Query: 92 DEPGAFDFNTLIRGFVK-EVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
P F +NTLI + A LY+ + ++P+ FTFP+LFKAC L+
Sbjct: 67 PNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRH 126
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
D+F+ S++ ++ +E ++ K
Sbjct: 127 ---------------DIFLIKSVLTLF-----IEMQKSLIKA------------------ 148
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
E LV+++SAC LGAL G H ++++ LN
Sbjct: 149 ----------------------NEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHF 186
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+LIDMY KCGCL+ LF + + L Y+ MI G A+HG G +AL +F +M EG
Sbjct: 187 VGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEG 246
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L PDDV V + +CSH GLV EG F+ MK Y + P ++HYGC+VDL+GRAG L EA
Sbjct: 247 LAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREA 306
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E + +MP++ N V+WRSLL A++VH NLEIGE+ K+L Q+ +YVLLSNMYA
Sbjct: 307 EERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYASI 366
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW DV ++R M G+N+ PG SLVEV +++F+ D++HP IY + +M +L
Sbjct: 367 NRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAMHEFLMGDKTHPRSKEIYLKLEEMSRRL 426
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
G+ P +VL D++E+EK + L HS++LAIAFALI +PIRI +NLR+C DCH
Sbjct: 427 HEYGHKPRTLEVLFDIEEEEKEDALSYHSERLAIAFALIASHHCAPIRIIKNLRVCGDCH 486
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T +KLIS IYEREIIVRDR RFH FK+G CSC DYW
Sbjct: 487 TSSKLISKIYEREIIVRDRNRFHHFKEGACSCSDYW 522
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 27 LRLKEQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
++ E + ++ C L + H +VLK N F + L+ S G +D
Sbjct: 146 IKANEVTLVALISACAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDM--YSKCGCLDL 203
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
AC +F Q+ +N +I GF +AL L+ +M G+ PD+ T +C+
Sbjct: 204 ACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSH 263
Query: 144 LQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS-WS 201
+ ++EG + + +V G E L L+++ G+ ++ A M K A W
Sbjct: 264 VGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWR 323
Query: 202 AIIAAHASNG 211
+++ A +G
Sbjct: 324 SLLGAARVHG 333
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 345/580 (59%), Gaps = 9/580 (1%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E+ L +L+ C +L+ +K+HAHV+ G + A+ L+ CA+S GS+ YA +F Q
Sbjct: 4 EKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLLFHQ 63
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKE 149
++ P +N++IRGF + +A+ YN+M PD FTF + KAC +++A ++
Sbjct: 64 MECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKAERK 123
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
++HG V + G++ D+ V +L+ Y V A +F +M + + +W+A+I+ +
Sbjct: 124 CKEVHGSVIRCGYDADVIVCTNLVKCYSAMGLVCIARQVFDKMPARDLVAWNAMISCFSQ 183
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
GL E L+ + +M +E + LV ++S+C HLGAL++G H N ++
Sbjct: 184 QGLHQEALQTYNQMRSENV-DVDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQSLY 242
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LIDMY KCG L++ + +F M K T++ MI G +HG+G EA+ F +ML
Sbjct: 243 VGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 302
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++P+ V ++G+L CSH GLV EG+ F+ M ++R+ P V+HYGC+VDL GRAG L +A
Sbjct: 303 IQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLDKA 362
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
LE++ S + V+WR LL + K+H N+ IGEIA L ++ + D +LL+ +YA
Sbjct: 363 LEIV-SNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAGE 421
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+ VA++R + S+G +PG+S +E+ +V+KFV D+SH +YE + ++ Q
Sbjct: 422 KDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQA 481
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKG----HSQKLAIAFALIHLSQGSPIRIARNLRMC 565
F GY D S + +D E LK HS+KLAIAF L + G+ IRI +NLR+C
Sbjct: 482 SFFGYVGDES--ISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVC 539
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH++ K +SV + REIIVRDR RFH FK G CSC DYW
Sbjct: 540 RDCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/561 (39%), Positives = 336/561 (59%), Gaps = 7/561 (1%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH ++ GF +PF A+ L+ GS+D A +F + E + +N L R
Sbjct: 100 VHRCLVDSGFDQDPFLATKLINM--YYELGSIDRALKVFDETRERTIYVWNALFRALAMV 157
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACA----KLQALKEGMQIHGHVFKVGFECD 165
+E L LY +M G D FT+ + KAC + L++G +IH H+ + G+E +
Sbjct: 158 GHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEAN 217
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+ V +L+++Y K V +A+++F M K+ SWSA+IA A N + + L+LF M
Sbjct: 218 IHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMF 277
Query: 226 EKCWR-PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E C P +V++L AC L AL+ GK HG ++R + V +LI MY +CG +
Sbjct: 278 EACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEV 337
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
G +F M + ++++ +IS MHG GK+A+ IF M+ +G+ P + ++ VL AC
Sbjct: 338 LMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGAC 397
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
SHAGLV EG + F+ M +YRI P ++HY C+VDL+GRA LGEA++LI+ M + V
Sbjct: 398 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTV 457
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W SLL + ++H N+E+ E A+ LF++ + +YVLL+++YA A+ W + + + +
Sbjct: 458 WGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEA 517
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+GL + PG S +EV RKVY FVS D +P + I+ ++ ++ ++K +GY P + VL D
Sbjct: 518 RGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYD 577
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
+DE+EK + GHS+KLA+AF LI+ ++G IRI +NLR+C DCH TK IS REI+
Sbjct: 578 LDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLRLCEDCHAVTKFISKFANREIL 637
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRD RFH F+DG CSC DYW
Sbjct: 638 VRDVNRFHHFRDGVCSCGDYW 658
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 118/219 (53%), Gaps = 5/219 (2%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L + K++HAH+L+ G+ N + L+ A +GS+ YA S+F + ++ +I
Sbjct: 199 LRKGKEIHAHILRHGYEANIHVMTTLLDVYA--KFGSVSYANSVFCAMPTKNFVSWSAMI 256
Query: 104 RGFVKEVEFEEALFLYN-EMFER-GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
F K +AL L+ MFE P++ T + +ACA L AL++G IHG++ +
Sbjct: 257 ACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQ 316
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
+ L V N+LI MYG+C +V +F M ++ V SW+++I+ + +G + +++F
Sbjct: 317 LDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFE 376
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
M ++ P ++VL AC+H G ++ GK S++
Sbjct: 377 NMIHQGV-SPSYISFITVLGACSHAGLVEEGKILFESML 414
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 27/329 (8%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N LI+ K ++AL L P TF L +CA+ +L G+ +H +
Sbjct: 51 NQLIQSLCKGGNLKQALHL----LCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVD 106
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
GF+ D F+ LINMY + ++ A +F + ++++ W+A+ A A G E L L
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDL 166
Query: 220 FGEMNNEKCW--RPEESILVS-VLSACT----HLGALDLGKCTHGSLIRNISALNVIVET 272
+ +MN W P + + VL AC + L GK H ++R+ N+ V T
Sbjct: 167 YIQMN----WIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMT 222
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE- 331
+L+D+Y K G + +F M K +++S MI+ A + +AL +F M+ E
Sbjct: 223 TLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNS 282
Query: 332 -PDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
P+ V V +L AC+ + +G L R +L+ I+P + ++ + GR G +
Sbjct: 283 VPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQLD-SILPVLN---ALITMYGRCGEVL 338
Query: 388 EALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ +M ++ DVV W SL+S +H
Sbjct: 339 MGQRVFDNM--KKRDVVSWNSLISIYGMH 365
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/583 (38%), Positives = 350/583 (60%), Gaps = 6/583 (1%)
Query: 26 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
++ + E L IL C L K++H + ++ GF ++ A+ VA A + G +
Sbjct: 231 DIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVA--AYAKCGMLI 288
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F ++ +N LI G + + +AL LY +M G+ PD FT +L A A
Sbjct: 289 CAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASA 348
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L++L+ G ++HG V + G E D F+ SL+++Y C + A +F M++KS SW+A
Sbjct: 349 HLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNA 408
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ ++ NGL + L LF ++ ++ ++P + +VSVL AC+ AL LGK TH ++
Sbjct: 409 MISGYSQNGLPEDALILFRKLVSDG-FQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ +V V S IDMY K GC+++ +F + +K +++ +I+ +HG G+E++ +F
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELF 527
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
M + G PD ++G+L+ CSHAGLV EGL F+ M+ + I P ++HY CV+D++GR
Sbjct: 528 ERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGR 587
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG L +AL L+ MP Q + VW SLLS + LEIG+I A+ L ++ + +YV L
Sbjct: 588 AGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSL 647
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+YA + RW DV ++R + GL + G S +E+ KV+ FV+ D P +
Sbjct: 648 SNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTW 707
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
++E ++ GY P+ S VL DVDE++K E+L+GHS+KLAI F L++ ++G+ +RI +NL
Sbjct: 708 RKLEKKMCKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNL 767
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCH +K +S + REII+RD KRFH FKDG CSC DYW
Sbjct: 768 RICVDCHNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 119/217 (54%), Gaps = 2/217 (0%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
DNFTFP + KAC G IHG V K+G D+FV N+LI MYGK V+ A +F
Sbjct: 30 DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVF 89
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGE-MNNEKCWRPEESILVSVLSACTHLGA 248
M +++ SW++II+ + NG +C + E M E+ P+ + LV+VL C
Sbjct: 90 HYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVD 149
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
+ +G HG ++ + +V V SL+DMY KCG L + LF K ++++ MI G
Sbjct: 150 VQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGG 209
Query: 309 LAMHGQGKEALSIFSEM-LREGLEPDDVVYVGVLSAC 344
L G EA ++F EM ++E +E ++V + +L AC
Sbjct: 210 LCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 145/299 (48%), Gaps = 4/299 (1%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H V+K G + F + L+A +G +D A +F + +N++I GF +
Sbjct: 53 IHGMVIKMGLLLDVFVGNALIAM--YGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSEN 110
Query: 110 VEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ + EM E G+ PD T + CA+ ++ G++IHG K+G D+
Sbjct: 111 GFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVR 170
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSL++MY KC + A +F + ++K+ SW+ +I + G E LF EM ++
Sbjct: 171 VNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQE 230
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
E ++++L AC + L K HG IR+ + +V + Y KCG L
Sbjct: 231 DIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICA 290
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M K +++ +I G A +G ++AL+++ +M GL PD +L A +H
Sbjct: 291 ERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAH 349
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD--LGKCTHGSLIR 261
+A H N L+S+ + +F ++ + + + V+ ACT G+LD LG+ HG +I+
Sbjct: 3 VAVH-RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIK 59
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
L+V V +LI MY K G ++ + +F M + ++++ +ISG + +G K+ +
Sbjct: 60 MGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDM 119
Query: 322 FSEML--REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
EM+ EGL PD V VL C+ V G+ + ++ + V+ +VD+
Sbjct: 120 LVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRVNNSLVDM 178
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G L EA +++ ++N V W +++
Sbjct: 179 YSKCGYLTEA-QMLFDKNNRKNAVSWNTMIGG 209
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/596 (36%), Positives = 339/596 (56%), Gaps = 35/596 (5%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+++ K++ A ++K P A+ + C H G + YA +F I P F +N +I
Sbjct: 1 MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAII 60
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
R + E E A Y +M V +++TFP L +AC L A+ E +Q+HG V K+GF
Sbjct: 61 RAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFG 120
Query: 164 CDLFVQNSLINMYGKCEK-------------------------------VEFASAIFKQM 192
D+F N+L+++Y C + V+ A +F M
Sbjct: 121 SDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDM 180
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
K+V SW+++I+ G E L L EM N + + + S+L+AC +LGALD G
Sbjct: 181 PLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAG-FELDGVAIASLLTACANLGALDQG 239
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY--SVMISGLA 310
+ H ++ N ++ ++ +L++MYVKCG +E+ L +F + + Y + MI G A
Sbjct: 240 RWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFA 299
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
+HG+G EAL F+ M REG+ P+ + + VL ACS+ GLV EG F MK Y + P++
Sbjct: 300 IHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSI 359
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HYGC+VDL+GR+G L EA ELI+ MP++ + V+W +LL A +H + +G +L +
Sbjct: 360 EHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVE 419
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
++S H Y+ L+ + A +W + A++R +M S G+ SPG S V + V++F++ +
Sbjct: 420 VDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGHQ 479
Query: 491 SHPAWDNIYEMIHQMEWQLK-FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH 549
HP + I + Q+ +L+ EGY P +L D++ +EK + HS+KLAIAF LI+
Sbjct: 480 DHPQMEQIQLKLKQIAERLRQDEGYEPATKDLLLDLENEEKETAMAQHSEKLAIAFGLIN 539
Query: 550 LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+ IR+ +NLR+C DCHT KL+S IY REII+RDR RFH F+DG+CSC+DYW
Sbjct: 540 TKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHFRDGSCSCKDYW 595
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/518 (41%), Positives = 315/518 (60%), Gaps = 8/518 (1%)
Query: 96 AFDFNTLIRGFVKEV-----EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+F +NTLIR V+ + ++ M GV+PD TFP L ++ A L G
Sbjct: 24 SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLG 83
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+H + + G D FVQ SLI+MY V+ A +F M +++V SWS +I +
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSCMINGYVRC 143
Query: 211 GLWSECLKLFGEMN--NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + E L LF EM RP E + VL+AC LGAL+ GK H + + ++V
Sbjct: 144 GQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDV 203
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++ T+LIDMY KCG +EK +F + +K + +S MISGLAMHG +E + +FS+M+
Sbjct: 204 VLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMIN 263
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
+G+ P+ V ++ V AC H GLV+EG RM +Y I+PT+QHYGC+VDL GRAG +
Sbjct: 264 QGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIK 323
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA +++SMP++ + +VW +LLS S++H ++E E+A K L ++ + YVLLSN+YA
Sbjct: 324 EAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYA 383
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+ RW DV +R M + G+ + PG SL+EV +++F D SHP I+ M+ ++
Sbjct: 384 KRGRWEDVRHVRDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILE 443
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
+LK EGY + +VL D+DE+ K L HS+KLA+A+ + S G+PIRI +NLR+C D
Sbjct: 444 RLKVEGYVGNTKEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRD 503
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH K+IS +++REIIVRD RFH F G CSCRDYW
Sbjct: 504 CHVAIKMISKVFDREIIVRDCNRFHHFTQGLCSCRDYW 541
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 146/273 (53%), Gaps = 9/273 (3%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ VHA +L++G +PF ++L++ + S G +D A ++F + E ++ +I G+V
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSS--GLVDMARNLFAVMPERNVISWSCMINGYV 141
Query: 108 KEVEFEEALFLYNEMFERG---VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+ +++EAL L+ EM G V P+ FT + AC +L AL+ G H ++ K G
Sbjct: 142 RCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV 201
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+ + +LI+MY KC VE A+ +F + K V +WSA+I+ A +GL EC+ LF +M
Sbjct: 202 DVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKM 261
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCG 282
N+ RP ++V AC H G + GK + + S + I ++D+Y + G
Sbjct: 262 INQGV-RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAG 320
Query: 283 CLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQ 314
+++ + + M + L + ++SG MHG
Sbjct: 321 RIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGD 353
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 338/566 (59%), Gaps = 10/566 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L K++H + LK F +N A+ VA+ A GS+ YA +F I +N LI
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYA--KCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G + + +L + +M G+ PD+FT +L AC+KL++L+ G ++HG + + E
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV S++++Y C ++ A+F M+ KS+ SW+ +I + NG L +F +M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 224 ---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+ C ++ V AC+ L +L LG+ H ++++ + + SLIDMY K
Sbjct: 589 VLYGIQLCGIS----MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
G + + +F + +K +++ MI G +HG KEA+ +F EM R G PDD+ ++GV
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L+AC+H+GL++EGL D+MK + + P ++HY CV+D++GRAG L +AL ++ ++
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 401 NDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
DV +W+SLLS+ ++H NLE+GE A LF++ P +YVLLSN+YA +W DV K+R
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M L + G S +E+ RKV+ FV +R ++ I + +E ++ GY PD
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
V D+ E+EK E+L+GHS+KLA+ + LI S+G+ IR+ +NLR+C DCH KLIS +
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
EREI+VRD KRFH FK+G CSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 6/274 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPAL 137
GS D + +F + F +N +I + + ++E L + EM + PD+FT+P +
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
KACA + + G+ +HG V K G D+FV N+L++ YG V A +F M ++++
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEM---NNEKCWRPEESILVSVLSACTHLGALDLGKC 254
SW+++I + NG E L GEM N + + P+ + LV+VL C + LGK
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG ++ +++ +L+DMY KCGC+ +F+M +K ++++ M+ G + G
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 315 GKEALSIFSEMLREG--LEPDDVVYVGVLSACSH 346
+ +ML G ++ D+V + + C H
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 10/317 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++K C + + VH V+K G + F + LV+ +H G + A +F + E
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG-TH-GFVTDALQLFDIMPE 250
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE----PDNFTFPALFKACAKLQALKE 149
+N++IR F EE+ L EM E + PD T + CA+ + +
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G +HG K+ + +L + N+L++MY KC + A IFK + K+V SW+ ++ ++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 210 NGLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + +M + + +E +++ + C H L K H ++ N
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+V + + Y KCG L +F + K +++ +I G A + +L +M
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 329 GLEPDDVVYVGVLSACS 345
GL PD +LSACS
Sbjct: 491 GLLPDSFTVCSLLSACS 507
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 13/283 (4%)
Query: 137 LFKACAKLQALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L +A K + ++ G +IH V D + +I MY C + + +F + K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ W+A+I++++ N L+ E L+ F EM + P+ V+ AC + + +G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +++ +V V +L+ Y G + L LF +M ++ ++++ MI + +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 316 KEALSIFSEMLRE----GLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVP 368
+E+ + EM+ E PD V VL C+ + G +++L+ +V
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G + A ++I M +N V W +++
Sbjct: 330 N----NALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 338/566 (59%), Gaps = 10/566 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L K++H + LK F +N A+ VA+ A GS+ YA +F I +N LI
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYA--KCGSLSYAQRVFHGIRSKTVNSWNALI 218
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G + + +L + +M G+ PD+FT +L AC+KL++L+ G ++HG + + E
Sbjct: 219 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 278
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV S++++Y C ++ A+F M+ KS+ SW+ +I + NG L +F +M
Sbjct: 279 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 338
Query: 224 ---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+ C ++ V AC+ L +L LG+ H ++++ + + SLIDMY K
Sbjct: 339 VLYGIQLCGIS----MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 394
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
G + + +F + +K +++ MI G +HG KEA+ +F EM R G PDD+ ++GV
Sbjct: 395 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 454
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L+AC+H+GL++EGL D+MK + + P ++HY CV+D++GRAG L +AL ++ ++
Sbjct: 455 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 514
Query: 401 NDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
DV +W+SLLS+ ++H NLE+GE A LF++ P +YVLLSN+YA +W DV K+R
Sbjct: 515 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 574
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M L + G S +E+ RKV+ FV +R ++ I + +E ++ GY PD
Sbjct: 575 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 634
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
V D+ E+EK E+L+GHS+KLA+ + LI S+G+ IR+ +NLR+C DCH KLIS +
Sbjct: 635 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 694
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
EREI+VRD KRFH FK+G CSC DYW
Sbjct: 695 EREIVVRDNKRFHHFKNGVCSCGDYW 720
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 165/378 (43%), Gaps = 14/378 (3%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFT 133
S G + A IF+ + +NT++ GF E + + +M G V+ D T
Sbjct: 88 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 147
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
C L ++H + K F + V N+ + Y KC + +A +F +
Sbjct: 148 ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR 207
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
K+V SW+A+I HA + L +M P+ + S+LSAC+ L +L LGK
Sbjct: 208 SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL-PDSFTVCSLLSACSKLKSLRLGK 266
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG +IRN ++ V S++ +Y+ CG L LF M DK ++++ +I+G +G
Sbjct: 267 EVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNG 326
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
AL +F +M+ G++ + + V ACS + G R Y + ++
Sbjct: 327 FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG-----REAHAYALKHLLEDD 381
Query: 374 GCV----VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
+ +D+ + G + ++ ++ + +++ W +++ + H L I
Sbjct: 382 AFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGI-HGLAKEAIKLFEEM 439
Query: 430 QINSHHPSDYVLLSNMYA 447
Q H+P D L + A
Sbjct: 440 QRTGHNPDDLTFLGVLTA 457
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 5/252 (1%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVE----PDNFTFPALFKACAKLQALKEGMQIH 154
+N++IR F EE+ L EM E + PD T + CA+ + + G +H
Sbjct: 6 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G K+ + +L + N+L++MY KC + A IFK + K+V SW+ ++ ++ G
Sbjct: 66 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125
Query: 215 ECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ +M + + +E +++ + C H L K H ++ N +V +
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 185
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
+ Y KCG L +F + K +++ +I G A + +L +M GL PD
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 245
Query: 334 DVVYVGVLSACS 345
+LSACS
Sbjct: 246 SFTVCSLLSACS 257
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 5/157 (3%)
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEM---NNEKCWRPEESILVSVLSACTHLGALDL 251
++ SW+++I + NG E L GEM N + + P+ + LV+VL C + L
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK HG ++ +++ +L+DMY KCGC+ +F+M +K ++++ M+ G +
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 312 HGQGKEALSIFSEMLREG--LEPDDVVYVGVLSACSH 346
G + +ML G ++ D+V + + C H
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 157
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/567 (38%), Positives = 334/567 (58%), Gaps = 10/567 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW--GSMDYACSIFRQIDEPG-AFDF 99
N++ +HA ++K NP + CA S + YA ++ + PG F +
Sbjct: 8 NMKSVYNLHATLIKNAQHDNPLSLRTFILRCANSSSPPDTARYAAAVLLRFPIPGDPFPY 67
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N +IR AL L++ M V D+FTFP + K+ +KL IH V K
Sbjct: 68 NAVIRHVALHAP-SLALALFSHMHRTNVPFDHFTFPLILKS-SKLNP----HCIHTLVLK 121
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+GF +++VQN+LIN YG + + +F +M ++ + SWS++I+ A GL E L L
Sbjct: 122 LGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRGLPDEALTL 181
Query: 220 FGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F +M E P+ +++SV+SA + LGAL+LG H + R L V + ++LIDMY
Sbjct: 182 FQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNLTVSLGSALIDMY 241
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+CG +++ + +F M + +T++ +I+GLA+HG+G+EAL F +M+ GL+PD + ++
Sbjct: 242 SRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVESGLKPDRIAFM 301
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
GVL ACSH GLV EG F M EY I P ++HYGC+VDL+GRAGM+ EA + ++ M +
Sbjct: 302 GVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVLEAFDFVEGMRV 361
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ N V+WR+LL A H+ L + E A + + +++ HH DYVLLSN Y W +
Sbjct: 362 RPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYGGVGNWVKKEGV 421
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M + + PG SLV + + ++FVS D SHP W+ I + + +K GY+P
Sbjct: 422 RNSMRESKIVKEPGLSLVHIDQVAHEFVSGDNSHPQWEEITRFLGSVIDTVKLGGYTPST 481
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
VL D+ E+EK L HS+KLA+AF L++ IR+ +NLR+C DCH++ K +S
Sbjct: 482 KNVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKTIRVIKNLRICYDCHSFMKHVSGF 541
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
++R+I++RDR RFH F+ G+CSCRD+W
Sbjct: 542 FDRDIVIRDRSRFHHFRKGSCSCRDFW 568
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/566 (38%), Positives = 338/566 (59%), Gaps = 6/566 (1%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C ++ +H HVLK G + F ++ L+ S +G + A +F Q++
Sbjct: 227 SILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINM--YSKFGRLQDAQMVFDQME 284
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I + + + AL + M G+ PD T +L ++L +
Sbjct: 285 VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 153 IHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
I G V + + D+ + N+L+NMY K + A +F Q+ +K SW+ ++ + NG
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNG 404
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L SE + + M + P + VS++ A +H+GAL G H LI+N L+V V
Sbjct: 405 LASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA 464
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T LID+Y KCG LE + LF + + ++ +I+ L +HG+G+EAL +F +ML E ++
Sbjct: 465 TCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVK 524
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D + +V +LSACSH+GLV+EG CFD M+ EY I P+++HYGC+VDL+GRAG L +A E
Sbjct: 525 ADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYE 584
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
L+++MPIQ + +W +LLSA K++ N E+G +A+ L +++S + YVLLSN+YA ++
Sbjct: 585 LVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEK 644
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W V K+R+ +GL ++PG+S V V K F + +++HP + IY+ + + ++K
Sbjct: 645 WEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKS 704
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD S V +D++EDEK + L HS++LAIAF +I SPIRI +NLR+C DCH
Sbjct: 705 LGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNA 764
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDG 597
TK IS I EREI+VRD RFH FKDG
Sbjct: 765 TKYISRISEREIVVRDSNRFHHFKDG 790
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 198/387 (51%), Gaps = 19/387 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
ILK C +L + KKVH V K GF + F A++LV S +G +D A +F +
Sbjct: 130 ILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHL--YSRYGVLDVAHKVFVDMPVKDV 187
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I GF + AL + N M GV+ D T ++ CA+ + G+ IH H
Sbjct: 188 GSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLH 247
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G + D+FV N+LINMY K +++ A +F QM+ + + SW++IIAA+ N S
Sbjct: 248 VLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTA 307
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLI 275
L+ F M RP+ +VS+ S + L + + G +IR +V++ +L+
Sbjct: 308 LRFFKGMQLGGI-RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALV 366
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM--LREGLEPD 333
+MY K G + +F + K ++++ +++G +G EA+ ++ M R+ + P+
Sbjct: 367 NMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PN 425
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGE 388
+V ++ A SH G + +G MK+ +++ + C++DL G+ G L +
Sbjct: 426 QGTWVSIIPAYSHVGALQQG------MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLED 479
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A+ L +P + V W +++++ +H
Sbjct: 480 AMSLFYEIP-RDTSVPWNAIIASLGIH 505
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 190/390 (48%), Gaps = 19/390 (4%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K+ + + +C N+ KK+HA +L +G N ++ L+ ++H G + + S F
Sbjct: 21 KDADFNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLI-NLYVTH-GDISLSRSTFD 78
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER----GVEPDNFTFPALFKACAKLQ 145
I + F +N++I +V+ ++ EA+ N++F + PD +TFP + KAC
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV--- 135
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+L +G ++H VFK+GFE D+FV SL+++Y + ++ A +F M K V SW+A+I+
Sbjct: 136 SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMIS 195
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
NG + L + M E + + + S+L C + G H ++++
Sbjct: 196 GFCQNGNAAGALGVLNRMKGEGV-KMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+V V +LI+MY K G L+ +F M + ++++ +I+ + AL F M
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM 314
Query: 326 LREGLEPDDVVYVGVLSACSHAG--LVNEGLLCF--DRMKLEYRIVPTVQHYGCVVDLMG 381
G+ PD + V + S S ++ +L F R L+ +V +V++
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG----NALVNMYA 370
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G + A + +P +++ + W +L++
Sbjct: 371 KLGYMNCAHTVFDQLP-RKDTISWNTLVTG 399
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 346/574 (60%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C L + +H +V+K G + F ++ L+ A +G++ A +F+Q+
Sbjct: 278 SILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYA--KFGNLGDAQKVFQQMF 335
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I + + + A + +M G+EPD T +L A+ + K
Sbjct: 336 LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRS 395
Query: 153 IHGHVFKVGFECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+HG + + G+ + + + N++++MY K ++ A +F + K V SW+ +I+ + NG
Sbjct: 396 VHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNG 455
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L SE ++++ M + + + VS+L+A H+GAL G HG LI+ L+V V
Sbjct: 456 LASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVG 515
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T LID+Y KCG L +CLF + + + ++ +IS +HG G++AL +F EM EG++
Sbjct: 516 TCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVK 575
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V ++ +LSACSH+GLV+EG F M+ EY I P+++HYGC+VDL+GRAG L A +
Sbjct: 576 PDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYD 634
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+ MP+ + +W +LL A ++H N+E+G+ A+ LF+++S + YVLLSN+YA +
Sbjct: 635 FIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGK 694
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W V K+R+ +GL ++PG+S +EV R+V F + ++SHP IY + + ++K
Sbjct: 695 WEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKS 754
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD S VL+DV+EDEK L HS++LAIAF +I S IRI +NLR+C DCH
Sbjct: 755 LGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNA 814
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I EREI+VRD KRFH FK+G CSC DYW
Sbjct: 815 TKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 199/391 (50%), Gaps = 19/391 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C+ L + +K+H V K GF W+ F A++L+ S +G + A S+F +
Sbjct: 181 VLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHM--YSRFGFVGIARSLFDDMPFRDM 238
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I G ++ +AL + +EM G+ D+ T ++ CA+L + IH +
Sbjct: 239 GSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLY 298
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G E +LFV N+LINMY K + A +F+QM + V SW++IIAA+ N
Sbjct: 299 VIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTA 358
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN-VIVETSLI 275
F +M P+ LVS+ S + HG ++R + V++ +++
Sbjct: 359 RGFFFKMQLNGL-EPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVM 417
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM--LREGLEPD 333
DMY K G ++ +F ++ K ++++ +ISG +G EA+ ++ M RE ++ +
Sbjct: 418 DMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE-IKLN 476
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGE 388
+V +L+A +H G + +G M++ ++ T H C++DL G+ G L +
Sbjct: 477 QGTWVSILAAYAHVGALQQG------MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVD 530
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A+ L +P +++ V W +++S +H + E
Sbjct: 531 AMCLFYQVP-RESSVPWNAIISCHGIHGHGE 560
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 17/397 (4%)
Query: 17 EEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS 76
+P K E++ ++ +C K++HA ++ G + F + LV A
Sbjct: 69 RQPAKNEEIDFN-------SLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYA-- 119
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEAL-FLYNEMFERGVEPDNFTFP 135
G + + F QI + +N++I +V+ F EA+ Y + + D +TFP
Sbjct: 120 SLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFP 179
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ KAC Q L +G +IH VFK+GF+ D+FV SLI+MY + V A ++F M +
Sbjct: 180 PVLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR 236
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+A+I+ NG ++ L + EM E + + S+L C LG +
Sbjct: 237 DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI-NMDSVTVASILPVCAQLGDISTATLI 295
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H +I++ + V +LI+MY K G L +F+ M + ++++ +I+ +
Sbjct: 296 HLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDP 355
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
A F +M GLEPD + V + S + + + ++ V
Sbjct: 356 VTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNA 415
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
V+D+ + G++ A ++ +P++ DVV W +L+S
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVK--DVVSWNTLISG 450
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 23/324 (7%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F +LF +C K K ++H + G F+ L+N+Y V + F Q+
Sbjct: 79 FNSLFDSCTKTLLAK---RLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ 135
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+K V +W+++I+A+ NG + E + F ++ ++ + VL AC L +D G+
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTL--VD-GR 192
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + + +V V SLI MY + G + LF M + +++ MISGL +G
Sbjct: 193 KIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNG 252
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC---FDRMKLEYRIVPTV 370
+AL + EM EG+ D V +L C+ G ++ L + LE+ + +
Sbjct: 253 NAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVS- 311
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLF 429
++++ + G LG+A ++ Q M ++ DVV W S+++A + + + + A+ F
Sbjct: 312 ---NALINMYAKFGNLGDAQKVFQQMFLR--DVVSWNSIIAAYEQNDD----PVTARGFF 362
Query: 430 ---QINSHHPSDYVLLSNMYARAQ 450
Q+N P L+S AQ
Sbjct: 363 FKMQLNGLEPDLLTLVSLASIAAQ 386
>gi|334183024|ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g34160
gi|332193557|gb|AEE31678.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 342/580 (58%), Gaps = 16/580 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T+++ C + + K++ +H L G F + F S L+ CA+S +G + +A IFR I +P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGV------EPDNFTFPALFKACAKLQALKE 149
D+N +IRGF A Y M ++ D T KACA+
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
Q+H + + G D + +L++ Y K + A +F +M + VASW+A+IA S
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
SE ++L+ M E R E ++ V+ L AC+HLG + G+ ++ S NVI
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTV-VAALGACSHLGDVKEGE----NIFHGYSNDNVI 242
Query: 270 VETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V + IDMY KCG ++K +F + K +T++ MI+G A+HG+ AL IF ++
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PDDV Y+ L+AC HAGLV GL F+ M + + ++HYGCVVDL+ RAG L E
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A ++I SM + + V+W+SLL AS+++ ++E+ EIA++ + ++ ++ D+VLLSN+YA
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
RW DV ++R +M SK + + PG S +E +++F + D+SH W IYE I ++ ++
Sbjct: 422 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 481
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL---SQGSPIRIARNLRMC 565
++ +GY VL D+ E+EK L HS+KLA+A+ L+ + + SP+R+ NLR+C
Sbjct: 482 IREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRIC 541
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K IS IY+REIIVRDR RFHRFKDG+CSCRD+W
Sbjct: 542 GDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/569 (39%), Positives = 329/569 (57%), Gaps = 34/569 (5%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C L + +K+H K GF WN F A++L+ S +G A S+F +
Sbjct: 124 VLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHM--YSRFGFTGIARSLFDDMPFRDM 181
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I G ++ +AL + +EM G+
Sbjct: 182 GSWNAMISGLIQNGNAAQALDVLDEMRLEGI----------------------------- 212
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
K+ F + + ++MY K ++ A +F+ + K V SW+ +I +A NGL SE
Sbjct: 213 --KMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA 270
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++++ M K P + VS+L A H+GAL G HG +I+ L+V V T LID
Sbjct: 271 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 330
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y KCG L + LF + + +T++ +IS +HG ++ L +F EML EG++PD V
Sbjct: 331 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 390
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V +LSACSH+G V EG CF R+ EY I P+++HYGC+VDL+GRAG L A + I+ M
Sbjct: 391 FVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM 449
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P+Q + +W +LL A ++H N+E+G+ A+ LF+++S + YVLLSN+YA +W V
Sbjct: 450 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 509
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
K+R+ +GL ++PG+S +EV RKV F + ++SHP IYE + + ++K GY P
Sbjct: 510 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIP 569
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
D S VL+DV+EDEK L HS++LAIAF +I SPIRI +NLR+C DCH TK IS
Sbjct: 570 DYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFIS 629
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +REI+VRD RFH FKDG CSC DYW
Sbjct: 630 RITQREIVVRDSNRFHHFKDGICSCGDYW 658
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 182/380 (47%), Gaps = 53/380 (13%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +HA ++ G + F ++ LV A + G + + F QI + + +N++I +V
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYA--NLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93
Query: 108 KEVEFEEALF-LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
F EA+ Y + + PD +TFP + KAC L +G +IH FK+GF+ ++
Sbjct: 94 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNV 150
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FV SLI+MY + A ++F M + + SW+A+I+ NG ++ L + EM E
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ +VS+L +DMY K G L+
Sbjct: 211 GI-KMNFVTVVSILPV-------------------------------FVDMYAKLGLLDS 238
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PDDVVYVGVLSAC 344
+F ++ K ++++ +I+G A +G EA+ ++ +M+ E E P+ +V +L A
Sbjct: 239 AHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAY 297
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGEALELIQSMPIQ 399
+H G + +G MK+ R++ T H C++D+ G+ G L +A+ L +P Q
Sbjct: 298 AHVGALQQG------MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-Q 350
Query: 400 QNDVVWRSLLSASKVHHNLE 419
++ V W +++S +H + E
Sbjct: 351 ESSVTWNAIISCHGIHGHAE 370
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 15/292 (5%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G + + F LF + K K +H + G +F+ L+N+Y V +
Sbjct: 14 GNQNEEIDFNFLFDSSTKTPFAK---CLHALLVVAGKVQSIFISTRLVNLYANLGDVSLS 70
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
F Q+ QK V +W+++I+A+ NG + E + F ++ RP+ VL AC
Sbjct: 71 RCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC-- 128
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
G L G+ H + NV V SLI MY + G LF M + +++ M
Sbjct: 129 -GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAM 187
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
ISGL +G +AL + EM EG++ + V V +L GLL D +
Sbjct: 188 ISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDM-YAKLGLL--DSAHKVFE 244
Query: 366 IVPT--VQHYGCVVDLMGRAGMLGEALELIQSM----PIQQNDVVWRSLLSA 411
I+P V + ++ + G+ EA+E+ + M I N W S+L A
Sbjct: 245 IIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 296
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/573 (37%), Positives = 337/573 (58%), Gaps = 19/573 (3%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILKTC L + +++H VLK GF +N + +S L+ A G +D+A IFR++
Sbjct: 443 SILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA--KHGKLDHALKIFRRLK 500
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + +I G+ + +F EAL L+ EM ++G++ DN F + ACA +QAL +G Q
Sbjct: 501 ENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQ 560
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH G+ DL + N+L+++Y +C KV A A F Q+ K SW+++++ A +G
Sbjct: 561 IHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGY 620
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ E L +F +MN + S +SA ++ + +GK HG + + V
Sbjct: 621 FEEALNIFAQMN-KAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN 679
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI +Y KCG ++ ++++ MI+G + HG G EAL +F +M + + P
Sbjct: 680 ALITLYAKCGTID-------------DISWNSMITGYSQHGCGFEALKLFEDMKQLDVLP 726
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V +VGVLSACSH GLV+EG+ F M + +VP +HY CVVDL+GR+G+L A
Sbjct: 727 NHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRF 786
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
++ MPIQ + +VWR+LLSA VH N++IGE AA +L ++ + YVL+SNMYA + +W
Sbjct: 787 VEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKW 846
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+ R M +G+ + PG S VEV V+ F + D++HP D IYE + ++++
Sbjct: 847 DCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAEN 906
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P + +L D + +K HS++LAIAF L+ L+ +P+ + +NLR+C DCH +
Sbjct: 907 GYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKNLRVCEDCHNWI 966
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S I +R IIVRD RFH FK G+CSC+DYW
Sbjct: 967 KHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 184/385 (47%), Gaps = 31/385 (8%)
Query: 34 CLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
C +L C +E F K++H VLK GF + + LV + S G++ A IF
Sbjct: 254 CQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRS--GNLSSAEQIFHC 311
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + +N+LI G ++ AL L+ +M +PD T +L ACA + AL G
Sbjct: 312 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 371
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF---KQMDQKSVASWSAIIAAH 207
Q H + K G D+ V+ SL+++Y KC ++ A F Q+D
Sbjct: 372 KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDN------------- 418
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
++ ++F +M E P + S+L CT LGA DLG+ H +++ N
Sbjct: 419 -----LNKSFQIFTQMQIEGI-VPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN 472
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V + LIDMY K G L+ L +FR + + ++++ MI+G H + EAL++F EM
Sbjct: 473 VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 532
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGML 386
+G++ D++ + +SAC+ +++G + L Y ++ + +V L R G +
Sbjct: 533 QGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN--ALVSLYARCGKV 590
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
EA + + N V W SL+S
Sbjct: 591 REAYAAFDQIYAKDN-VSWNSLVSG 614
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 133/236 (56%), Gaps = 1/236 (0%)
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
++ +M G+ P+ FT+P++ K C L A G QIH V K GF+ +++V + LI+MY
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
K K++ A IF+++ + V SW+A+IA + + ++E L LF EM ++ + +
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGI-KSDNIGFA 543
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S +SAC + ALD G+ H + + ++ + +L+ +Y +CG + + F + K
Sbjct: 544 SAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAK 603
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++++ ++SG A G +EAL+IF++M + GLE + + +SA ++ V G
Sbjct: 604 DNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIG 659
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 209/502 (41%), Gaps = 57/502 (11%)
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+G ++ A ++F ++ +N + F+ E L+ M + VE D F +
Sbjct: 110 FGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVV 169
Query: 138 FKACA-KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ C+ + + QIH GFE F+ N LI++Y K + A +F+ + +
Sbjct: 170 LRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARD 229
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW A+I+ + NG E + LF ++ VLSACT + + GK H
Sbjct: 230 SVSWVAMISGLSQNGYEEEAMLLFCQI---------------VLSACTKVEFFEFGKQLH 274
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
G +++ + V +L+ +Y + G L +F M+ + +++Y+ +ISGLA G
Sbjct: 275 GLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 334
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
AL++F +M + +PD V +LSAC+ G + G F ++ + + G +
Sbjct: 335 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQ-FHSYAIKAGMTSDIVVEGSL 393
Query: 377 VDL----------------MGRAGMLGEALELIQSMPIQ---QNDVVWRSLLSASKVHHN 417
+DL G+ L ++ ++ M I+ N + S+L
Sbjct: 394 LDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453
Query: 418 LEIGE----IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
++GE K FQ N + S +L +MYA+ + KI +
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSS---VLIDMYAKHGKLDHALKIFRRLKEN-------- 502
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS-----QVLRDVDED 528
+V + + D+ A N+++ + + G++ IS Q L +
Sbjct: 503 DVVSWTAMIAGYTQHDKFTEAL-NLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQI 561
Query: 529 EKRERLKGHSQKLAIAFALIHL 550
+ L G+S L+I AL+ L
Sbjct: 562 HAQSCLSGYSDDLSIGNALVSL 583
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/571 (39%), Positives = 338/571 (59%), Gaps = 3/571 (0%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+I+ L+ +++HA ++ G + L+ + A + + Y +F I +P
Sbjct: 24 SIILAGPRLKPLQQIHARIIITGLGRTRSLITKLL-SFAYAAASPISYTRRLFFSIPKPD 82
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F F++LI K +E+L Y M + N+TF A+ K+ A L A G IH
Sbjct: 83 TFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHC 142
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
HV+ G+ D +VQ +L++ Y K V A +F +M +K+V +W+++I+ + NG E
Sbjct: 143 HVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKE 202
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
++LF M + +P+ S VS+LSAC +GA+ LG H + RN LNV++ T+L+
Sbjct: 203 AVELFFLMQDLGV-KPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALM 261
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
+MY +CG + K +F M +K + ++ MISG MHG G +A+ +F+EM +G P++V
Sbjct: 262 NMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNV 321
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+V VLSAC+HAGLV+EG F MK EY +VP+V+H C+VD++GRAG L EA + I++
Sbjct: 322 TFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKN 381
Query: 396 M-PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
P + VW ++L A K+H N ++G A++L I +P YV+LSN+YA A R
Sbjct: 382 TSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDR 441
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V KIR M L + G+S ++V KVY F D+SHP + IY + ++ + + GY
Sbjct: 442 VEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGY 501
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P V+ +V+E+E+ L+ HS+KLAIAF L+ G IRI +NLRMC DCHT K
Sbjct: 502 IPASESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKY 561
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS+I REI VRDR RFH FKDG+CSC+DYW
Sbjct: 562 ISIIANREINVRDRLRFHHFKDGSCSCQDYW 592
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/571 (38%), Positives = 332/571 (58%), Gaps = 6/571 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + +C ++ +++HA V K + + F LV TC + G + A +F +
Sbjct: 46 LIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLV-TC-YNKLGYAEDALKLFDDMPHK 103
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N+LI GF + + F Y FE V+P+ T ++ AC+ AL G IH
Sbjct: 104 DLVSWNSLISGFSRCLHMSLTAF-YTMKFEMSVKPNEVTILSMISACSG--ALDAGKYIH 160
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G KVG ++ V NSLINMYGK + A +F+ + + SW++IIAA +NG
Sbjct: 161 GFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAR 220
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E + F +M + E +IL ++L AC HLG L + HG + + + T+L
Sbjct: 221 EGIDYFNKMRRLGIEQDEGTIL-ALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATAL 279
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+D Y K G L +F + ++ ++ M++G A HG G+EA+ +F M +GLEPD
Sbjct: 280 LDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDH 339
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V + +LSACSH+GLVNEG F+ M Y I P V HY C+VDL+GR G+L +A E+IQ
Sbjct: 340 VTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQ 399
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
+MP++ N VW +LL A +VH N+E+G+ A++L + P +Y++LSNMY+ ++ W D
Sbjct: 400 NMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKD 459
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
AK+R + +GL ++PG+S +E K + F DRSHP + IY + ++ +++ GY
Sbjct: 460 AAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGY 519
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
S VL+DV+E+ K + + HS+KLAIAF L+ +G + I +NLR+C DCH+ KL
Sbjct: 520 SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKL 579
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS+I +R II+RD KRFH F DG CSC DYW
Sbjct: 580 ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
AL A ++ +IH VFK D F+ + L+ Y K E A +F M K
Sbjct: 44 ALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHK 103
Query: 196 SVASWSAIIAAHASNGLWSECLKL----FGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ SW+++I+ +S CL + F M E +P E ++S++SAC+ GALD
Sbjct: 104 DLVSWNSLISG------FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACS--GALDA 155
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK HG I+ L V V SLI+MY K G L LF + D ++++ +I+
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+G +E + F++M R G+E D+ + +L AC H G+
Sbjct: 216 NGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/566 (37%), Positives = 336/566 (59%), Gaps = 20/566 (3%)
Query: 48 KKVHAHVLKWG-----FFWNPFCASNLVATCALSHWGSMDYACS---IFRQIDEPGAFDF 99
K +H +LK G F WN L+ + D+ C +F ++ E F
Sbjct: 58 KGLHCEILKRGGCLDLFAWNIL----------LNMYVKSDFLCDASKLFDEMPERNTISF 107
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
TLI+G+ + V F EA+ L+ + R V P+ FTF ++ +ACA ++ L G QIH HV K
Sbjct: 108 VTLIQGYAESVRFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK 166
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+G D+FV N+L+++Y KC ++E + +F + ++ +W+ +I H G + L+L
Sbjct: 167 IGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRL 226
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F M + + E S L AC L AL+ G H ++ +++V +LIDMY
Sbjct: 227 FLNMLEYRV-QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYA 285
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG ++ +F +M + +++++ MISG +MHG G+EAL IF +M ++PD + +VG
Sbjct: 286 KCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVG 345
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
VLSAC++AGL+++G F M ++ I P ++HY C+V L+GR G L +A++LI +P Q
Sbjct: 346 VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQ 405
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ +VWR+LL A +H+++E+G I+A+ + ++ + +VLLSNMYA A+RW +VA +R
Sbjct: 406 PSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVR 465
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M KG+ + PG S +E V+ F D SHP I M+ + + K GY P+ +
Sbjct: 466 KNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYN 525
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
VL DV+++EK L HS++LA++F +I GSPIRI +NLR+C DCH K IS +
Sbjct: 526 VVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVV 585
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+REI+VRD RFH F++G CSC DYW
Sbjct: 586 QREIVVRDINRFHHFQEGLCSCGDYW 611
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 129/230 (56%), Gaps = 6/230 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C +E ++H HV+K G + F ++ L+ A G M+ + +F +
Sbjct: 143 SVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYA--KCGRMENSMELFAESP 200
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+NT+I G V+ + E+AL L+ M E V+ T+ + +ACA L AL+ G+Q
Sbjct: 201 HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ 260
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K F+ D+ V N+LI+MY KC ++ A +F M+++ SW+A+I+ ++ +GL
Sbjct: 261 IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL 320
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
E L++F +M + +P++ V VLSAC + G LD G+ S+I++
Sbjct: 321 GREALRIFDKMQETEV-KPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 369
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 13/295 (4%)
Query: 127 VEPDNFTFPALFKA---CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
V P F A A C + G +H + K G DLF N L+NMY K + +
Sbjct: 31 VSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLC 90
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
AS +F +M +++ S+ +I +A + + E ++LF ++ E P + SVL AC
Sbjct: 91 DASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVL--PNQFTFASVLQAC 148
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+ L+LG H +I+ +V V +L+D+Y KCG +E + LF + +T++
Sbjct: 149 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWN 208
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RM 360
+I G G G++AL +F ML ++ +V Y L AC+ + GL +
Sbjct: 209 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKT 268
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ IV T ++D+ + G + +A L+ + +Q++V W +++S +H
Sbjct: 269 TFDKDIVVT----NALIDMYAKCGSIKDA-RLVFDLMNKQDEVSWNAMISGYSMH 318
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 340/606 (56%), Gaps = 68/606 (11%)
Query: 63 PFCASNLVATCAL---SHWGSMDYACSIFRQ-IDEPGAFDFNTLIRGFVKEVEFEEALFL 118
P N++A + S G++ ++ IF + P F +N L++ F + + +
Sbjct: 53 PSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISY 112
Query: 119 YNE--MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV------------------- 157
+N + PD +TF ++ KACA L + EG ++H V
Sbjct: 113 FNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLY 172
Query: 158 FKVGFEC------------DLFVQNSLINMY--------------GKCEK---------- 181
FKVG C D+ N+LI+ Y G EK
Sbjct: 173 FKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMIS 232
Query: 182 -------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
+E A +F+ M ++V SW+A+IA +A N +++ ++LF +M +E P +
Sbjct: 233 GYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDV 292
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
LVSVLSAC HLGALDLGK H + RN + + + +L DMY KCGC+ + +F M
Sbjct: 293 TLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEM 352
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
++ +++S++I GLAM+G EA + F+EM+ +GLEP+D+ ++G+L+AC+HAGLV++GL
Sbjct: 353 HERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGL 412
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
FD M Y I P ++HYGCVVDL+ RAG L +A LI SMP+Q N +VW +LL ++
Sbjct: 413 EYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRI 472
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
+ + E GE + +++S+H V L+N+YA R D A R M ++PG S
Sbjct: 473 YKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCS 532
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+E+ VY+F D SHP IY MI +++W++K GY P V+ ++DE+EK + L
Sbjct: 533 WIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDAL 592
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+KLA+AF LI+ S+G+ IRI +NLR+CNDCH K+IS I EREI+VRDR RFH F
Sbjct: 593 STHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHF 652
Query: 595 KDGTCS 600
KDG CS
Sbjct: 653 KDGKCS 658
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 340/563 (60%), Gaps = 16/563 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH V++ GF + F + LV A G + A +F ++ + +I + +
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYA--KCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQA 211
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+AL L+ +M E G D T ++ A +L + + +HG+ GF D+ V
Sbjct: 212 ERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVG 271
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
NS++ MY KC VE A +F +M++++ SW+++++ + NG ++ L LF +M +C
Sbjct: 272 NSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASEC- 330
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P + ++SAC++LG+ LG+ H +I + ++ + +++DMY+KCG L+ +
Sbjct: 331 DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVE 390
Query: 290 LFRMMADKCQL------TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+F + C+L +++V+ISG +HG GKEAL +FS M EG+EP+D+ + +LSA
Sbjct: 391 MF----NNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446
Query: 344 CSHAGLVNEGLLCF-DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
CSHAGL++EG CF D KL R P ++HY C+VD++GRAG L EA LI+ +P + +D
Sbjct: 447 CSHAGLIDEGRKCFADMTKLSVR--PEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSD 504
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
VW +LL A ++H N E+GEIAA NLFQ+ H YVL+SN+YA + +W +V +R M
Sbjct: 505 EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNM 564
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
S+GL + FS++E +V+ F + D+S P + +Y + + ++K GY PD+S VL
Sbjct: 565 KSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVL 624
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DV+ ++K L HS+KLA+AF ++ + QG PI++ +NLR+C+DCH K IS IY R+
Sbjct: 625 HDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRK 684
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFH F+ G CSC DYW
Sbjct: 685 IIVRDGNRFHHFQGGRCSCGDYW 707
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 207/427 (48%), Gaps = 27/427 (6%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWN-PFCASNLVATCALSHWGSMDYACSIF------- 88
+L+ C +L K +H+ + GF + P + L+ S G + A ++F
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIIL--YSKLGDLHSARTLFDHRHHHH 88
Query: 89 -RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
P +F NT++R + EA+ LY M GV +NFT+P + K CA
Sbjct: 89 HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGA 148
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G +HG V + GF DLFV+ +L++MY KC ++ A +F +M + V W+A+I +
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ L LF +M E+ + +E +SV SA LG + HG + N +
Sbjct: 209 EQAERPLKALMLFRKM-QEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGD 267
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V S++ MY KCG +E+ +F M ++ ++++ M+SG +G+ +ALS+F++M
Sbjct: 268 VSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQA 327
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
+P+ V + ++SACS+ G + G + +M ++ + ++D+ +
Sbjct: 328 SECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTL------RNAIMDMYMK 381
Query: 383 AGMLGEALELIQSMPIQQNDV-VWRSLLSASKVH-HNLEIGEIAAKNLFQINSHHPSDYV 440
G L A+E+ + + + DV W L+S VH H E E+ ++ Q+ P+D
Sbjct: 382 CGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSR--MQVEGVEPNDIT 439
Query: 441 LLSNMYA 447
S + A
Sbjct: 440 FTSILSA 446
>gi|357464871|ref|XP_003602717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491765|gb|AES72968.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 554
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 338/562 (60%), Gaps = 18/562 (3%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF-RQIDEPGAFDFNTLIRGFV 107
K+HA ++K G NP TC+ ++ + YA ++ R P F +NT+I
Sbjct: 6 KLHATLIKTGQHQNPHSLRPFFLTCS-NYPAAARYAATVLLRLPTPPDPFSYNTII---- 60
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
K V A+ L++ M V D+FTFP + K +FK+GF+ ++F
Sbjct: 61 KHVSPTGAISLFSHMHRNSVPFDHFTFPLILKHHHHHLLHSL-------IFKLGFDTNIF 113
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--- 224
VQN+LIN YG ++ A +F +M ++ + SWS +I+ N L +E L +F +M
Sbjct: 114 VQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGH 173
Query: 225 -NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ + W + +I++SV+SA + LG ++LG H ++R + V + T+LI+MY +CG
Sbjct: 174 RDIRNWL-DRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGL 232
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+++ + +F M ++ +T++ +I+GLA+HG+ +EAL +F EM GL+PD +++GVL A
Sbjct: 233 IDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVA 292
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSH GLV +G F+ M+ E+ I P ++HYGC+VDL+GRAG++ EA + ++ MP++ N V
Sbjct: 293 CSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSV 352
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+WR+LL A H++L + E A + + +++ +H DYVLLSN Y R W A +R M
Sbjct: 353 IWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLRNSMK 412
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
+ + PG S V + + V++FVS D HP W+ I + + + +K GY+P+ S VL
Sbjct: 413 QNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNTSSVLH 472
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D+ ++EK L HS+KLA+AF L++ IR+ +NLR+C DCH + K S I++R+I
Sbjct: 473 DIQDEEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCHDFMKHASGIFDRDI 532
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
I+RDR RFH F G CSC+D+W
Sbjct: 533 IIRDRNRFHHFSKGLCSCQDFW 554
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/533 (39%), Positives = 326/533 (61%), Gaps = 17/533 (3%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKAC 141
YA S+ + P F +NT IR A+ LY M + P+N+T+P L AC
Sbjct: 46 YAISLLQA--HPTTFSYNTTIRSLAHGPRPHLAVALYRSMLLNPLSNPNNYTYPPLLAAC 103
Query: 142 AKL------QALKEGMQIHGHVFKVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQM-- 192
A+L + G +H +F+ G E D F+ S+++ Y + A +F +
Sbjct: 104 ARLLPAHPPREAAAGTAVHASLFRRGLESRDRFISASMLSFYAAAGDLPAAREVFDRSPP 163
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+Q+ +A W++++ A+ S GL++ L+LF +M +E L++V+SAC+HLGALD G
Sbjct: 164 NQRDLALWNSLLHAYLSQGLYTHVLRLFRQMVAT-----DEVTLLAVVSACSHLGALDTG 218
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ H R + T+L++MY++CG +E +F M DK T+SVMI+GLA++
Sbjct: 219 RWAHAYHARTCRNTTRNLGTALLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVN 278
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G ++AL +F+EM G++PD + VLSACSHAG+V+EG + M +EY + PT++H
Sbjct: 279 GLPRDALKLFAEMKNIGVDPDSITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEH 338
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQIN 432
YGCVVDL+GRAG L EAL LI+++P + + +W +LL A + H N+++G++AA + +++
Sbjct: 339 YGCVVDLLGRAGQLEEALALIETVPFKADVALWGALLVACRAHKNVDMGQMAAMEILKLD 398
Query: 433 SHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSH 492
HH V LSN YA A +W V ++R+ M + + PG S+VE+ VY+F+S D SH
Sbjct: 399 PHHAGACVFLSNAYAAAGKWDLVQEVRSSMKEHRIYKPPGSSIVELDGVVYEFLSGDHSH 458
Query: 493 PAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ 552
P D IY M+ ++ L +G+ P +V D+DE++K + HS+KLA+A LI +
Sbjct: 459 PQSDRIYAMLDEVCKTLSLKGHRPSTKEVAFDIDEEDKEVCISQHSEKLALALGLISTRR 518
Query: 553 GSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+ IRI +NLR+C DCH+ K++S +Y+R I+VRDR RFH FK+G+CSC DYW
Sbjct: 519 GAVIRIVKNLRICEDCHSVMKIVSEVYDRVIVVRDRNRFHHFKNGSCSCLDYW 571
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/564 (39%), Positives = 334/564 (59%), Gaps = 4/564 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+E+ +VH V+K G F +++V + S S A ++F ++ A +N++I
Sbjct: 209 VEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS--DAKAVFDSMENRNAVSWNSMI 266
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
GFV EA L+ M GV+ F + K CA ++ + Q+H V K G +
Sbjct: 267 AGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSD 326
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAIIAAHASNGLWSECLKLFGE 222
DL ++ +L+ Y KC +++ A +F M ++V SW+AII+ + NG + LF +
Sbjct: 327 FDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQ 386
Query: 223 MNNEKCWRPEESILVSVLSACTH-LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M E+ P E SVL+AC +++ GK H I++ + + V ++L+ MY K
Sbjct: 387 MRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKR 446
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E +F+ D+ ++++ MISG A HG GK++L IF EM + LE D + ++GV+
Sbjct: 447 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 506
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SAC+HAGLVNEG FD M +Y IVPT++HY C+VDL RAGML +A++LI MP
Sbjct: 507 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAG 566
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+WR+LL+A +VH N+++GE+AA+ L + + YVLLSN+YA A W + AK+R
Sbjct: 567 ATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKL 626
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M K + + G+S +EV K + F++ D SHP D IY + ++ +LK GY PD V
Sbjct: 627 MDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYV 686
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DV+E+ K L HS++LAIAF LI G+PI+I +NLR+C DCHT KLIS I R
Sbjct: 687 LHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGR 746
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
+I+VRD RFH FK G+CSC DYW
Sbjct: 747 DIVVRDSNRFHHFKGGSCSCGDYW 770
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 208/402 (51%), Gaps = 14/402 (3%)
Query: 37 ILKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + K+VH +K GF + ++LV + S++ +F ++
Sbjct: 98 VLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTE--SVEDGERVFDEMRV 155
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +L+ G+ + E+AL L+++M G++P+ FTF A+ A A+++G+Q+
Sbjct: 156 KNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQV 215
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V K G + +FV NS++NMY K V A A+F M+ ++ SW+++IA +NGL
Sbjct: 216 HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLD 275
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E +LF M E + ++I +V+ C ++ + K H +I+N S ++ ++T+
Sbjct: 276 LEAFELFYRMRLEGV-KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTA 334
Query: 274 LIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLE 331
L+ Y KC ++ LF MM + ++++ +ISG +G+ A+++F +M R EG+E
Sbjct: 335 LMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVE 394
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P++ + VL+AC+ E F ++ + +V + + G + A E
Sbjct: 395 PNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANE 454
Query: 392 LIQSMPIQQNDVVWRSLLSASKVH----HNLEI-GEIAAKNL 428
+ + + ++ V W S++S H +L+I E+ +KNL
Sbjct: 455 VFKRQ-VDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNL 495
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F + + G N L+ F + + +EAL L+ + G D + + K C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
G Q+H K GF D+ V SL++MY K E VE +F +M K+V SW++++A
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NGL + LKLF +M E +P +VL GA++ G H +I++
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGI-KPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ V S+++MY K + +F M ++ ++++ MI+G +G EA +F M
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 327 REGLEPDDVVYVGVLSACSH 346
EG++ ++ V+ C++
Sbjct: 287 LEGVKLTQTIFATVIKLCAN 306
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE-SILVSVLSACTHL 246
+F + Q+ ++ + ++ + N E L LF + + P + S L VL C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLF--LGLRRSGSPTDGSSLSCVLKVCGCL 105
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+GK H I+ +V V TSL+DMY+K +E G +F M K ++++ ++
Sbjct: 106 FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLL 165
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+G +G ++AL +FS+M EG++P+ + VL + G V +G+ M ++ +
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT-MVIKSGL 224
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
T+ +V++ ++ M+ +A + SM +N V W S+++
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAG 268
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 330/589 (56%), Gaps = 14/589 (2%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVA---TCALSH 77
++ L T+L L+E++ + K G + + + L++ C S
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G + +F QID+P +N +I G+ E E A+ L+ E+ G ++ T L
Sbjct: 267 KGRI-----LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGL 321
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
L+ I K+G V +L +Y + +V+FA +F + +KS+
Sbjct: 322 IPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSL 381
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
ASW+A+I+ + NGL + LF EM + P + S+LSAC LGAL +GK HG
Sbjct: 382 ASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWVHG 439
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ NV V T+L+DMY KCG + + LF +M DK +T++ MI+G +HG GKE
Sbjct: 440 LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKE 499
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +F EML+ G+ P V ++ +L ACSH+GLV+EG F M Y P +HY C+V
Sbjct: 500 ALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMV 559
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
D++GRAG L ALE I+ MP++ VW +LL A +H N E+ +A+K LFQ++ +
Sbjct: 560 DILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVG 619
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLSN+Y+ + + A +R + + L ++PG +L+E+ + Y F S DRSHP
Sbjct: 620 YYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATA 679
Query: 498 IYEMIHQMEWQLKFEGYSPD-ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
I+EM+ ++ +++ GY + ++ L DV+++EK + HS+KLAIAF LI G+ I
Sbjct: 680 IFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEI 739
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLR+C DCHT TK IS I ER I+VRD RFH FK+G CSC DYW
Sbjct: 740 RIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 192/405 (47%), Gaps = 21/405 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+HAH + G N F S +V + + A +F + E +NT+I GF +
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDL--YFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
FE+++ ++ +M + G+ D+ T + A A+LQ + GM I K G D++V
Sbjct: 193 SYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
LI++Y KC K +F Q+DQ + S++A+I+ + N + LF E+
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL-LASGQ 311
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-----ALNVIVETSLIDMYVKCGCL 284
R S LV ++ L L + LI+N+S L V T+L +Y + +
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSR-----LIQNLSLKIGIILQPSVSTALTTVYCRLNEV 366
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ LF +K +++ MISG +G A+S+F EM+ + L P+ V +LSAC
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSAC 425
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ G ++ G +K E R+ V +VD+ + G + EA +L M + +N V
Sbjct: 426 AQLGALSIGKWVHGLIKSE-RLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVT 483
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLSNMYA 447
W ++++ +H + G+ A K +++ + P+ LS +YA
Sbjct: 484 WNAMITGYGLHGH---GKEALKLFYEMLQSGIPPTGVTFLSILYA 525
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 12/312 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH----WGSMDYACSIFRQ 90
LT+L L + ++ A ++ G ++ L + L+H G++ + +F +
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYD------LSSITKLTHKFFDLGAVAHVRQLFNK 71
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKE 149
+ +P F FN LIRGF + ++FLY + + + PDNFT+ A ++L+ +
Sbjct: 72 VSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERV 131
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G+ +H H G +LFV ++++++Y K + E A +F M ++ W+ +I+ +
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR 191
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N + + +++F +M + + + L +VL+A L LG + +V
Sbjct: 192 NSYFEDSIRVFVDM-LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T LI +Y KCG KG LF + ++Y+ MISG + + + A+++F E+L G
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310
Query: 330 LEPDDVVYVGVL 341
+ VG++
Sbjct: 311 QRVNSSTLVGLI 322
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 89/200 (44%)
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
L + +QI + G DL L + + V +F ++ + + ++ +I
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NGL + L+ + RP+ +SA + L +G H I + A
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N+ V ++++D+Y K E +F +M ++ + ++ MISG + + ++++ +F +M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 326 LREGLEPDDVVYVGVLSACS 345
L GL D VL+A +
Sbjct: 206 LDVGLSFDSTTLATVLTAVA 225
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/571 (38%), Positives = 331/571 (57%), Gaps = 6/571 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + +C ++ +++HA V K + + F LV TC + G + A +F +
Sbjct: 46 LIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLV-TC-YNKLGYAEDALKLFDDMPHK 103
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N+LI GF + + F Y FE V+P+ T ++ AC AL G IH
Sbjct: 104 DLVSWNSLISGFSRCLHMSLTAF-YTMKFEMSVKPNEVTILSMISACNG--ALDAGKYIH 160
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G KVG ++ V NSLINMYGK + A +F+ + + SW++IIAA +NG
Sbjct: 161 GFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAR 220
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E + F +M + E +IL ++L AC HLG L + HG + + + T+L
Sbjct: 221 EGIDYFNKMRRLGIEQDEGTIL-ALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATAL 279
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+D Y K G L +F + ++ ++ M++G A HG G+EA+ +F M +GLEPD
Sbjct: 280 LDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDH 339
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V + +LSACSH+GLVNEG F+ M Y I P V HY C+VDL+GR G+L +A E+IQ
Sbjct: 340 VTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQ 399
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
+MP++ N VW +LL A +VH N+E+G+ A++L + P +Y++LSNMY+ ++ W D
Sbjct: 400 NMPMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKD 459
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
AK+R + +GL ++PG+S +E K + F DRSHP + IY + ++ +++ GY
Sbjct: 460 AAKVRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGY 519
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
S VL+DV+E+ K + + HS+KLAIAF L+ +G + I +NLR+C DCH+ KL
Sbjct: 520 SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKL 579
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS+I +R II+RD KRFH F DG CSC DYW
Sbjct: 580 ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 610
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
AL A ++ +IH VFK D F+ + L+ Y K E A +F M K
Sbjct: 44 ALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHK 103
Query: 196 SVASWSAIIAAHASNGLWSECLKL----FGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ SW+++I+ +S CL + F M E +P E ++S++SAC GALD
Sbjct: 104 DLVSWNSLISG------FSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACN--GALDA 155
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK HG I+ L V V SLI+MY K G L LF + D ++++ +I+
Sbjct: 156 GKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT 215
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+G +E + F++M R G+E D+ + +L AC H G+
Sbjct: 216 NGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 330/589 (56%), Gaps = 14/589 (2%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVA---TCALSH 77
++ L T+L L+E++ + K G + + + L++ C S
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G + +F QID+P +N +I G+ E E A+ L+ E+ G ++ T L
Sbjct: 267 KGRI-----LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGL 321
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
L+ I K+G V +L +Y + +V+FA +F + +KS+
Sbjct: 322 IPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSL 381
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
ASW+A+I+ + NGL + LF EM + P + S+LSAC LGAL +GK HG
Sbjct: 382 ASWNAMISGYTQNGLTDRAISLFQEMMPQ--LSPNPVTVTSILSACAQLGALSIGKWVHG 439
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ NV V T+L+DMY KCG + + LF +M DK +T++ MI+G +HG GKE
Sbjct: 440 LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKE 499
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +F EML+ G+ P V ++ +L ACSH+GLV+EG F M Y P +HY C+V
Sbjct: 500 ALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMV 559
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
D++GRAG L ALE I+ MP++ VW +LL A +H N E+ +A+K LFQ++ +
Sbjct: 560 DILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVG 619
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLSN+Y+ + + A +R + + L ++PG +L+E+ + Y F S DRSHP
Sbjct: 620 YYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATA 679
Query: 498 IYEMIHQMEWQLKFEGYSPD-ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
I+EM+ ++ +++ GY + ++ L DV+++EK + HS+KLAIAF LI G+ I
Sbjct: 680 IFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLISTKPGTEI 739
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLR+C DCHT TK IS I ER I+VRD RFH FK+G CSC DYW
Sbjct: 740 RIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 192/405 (47%), Gaps = 21/405 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+HAH + G N F S +V + + A +F + E +NT+I GF +
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDL--YFKFTRAELARKVFDVMPERDTVLWNTMISGFSRN 192
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
FE+++ ++ +M + G+ D+ T + A A+LQ + GM I K G D++V
Sbjct: 193 SYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVL 252
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
LI++Y KC K +F Q+DQ + S++A+I+ + N + LF E+
Sbjct: 253 TGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFREL-LASGQ 311
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-----ALNVIVETSLIDMYVKCGCL 284
R S LV ++ L L + LI+N+S L V T+L +Y + +
Sbjct: 312 RVNSSTLVGLIPVYLPFNHLQLSR-----LIQNLSLKIGIILQPSVSTALTTVYCRLNEV 366
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ LF +K +++ MISG +G A+S+F EM+ + L P+ V +LSAC
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSAC 425
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ G ++ G +K E R+ V +VD+ + G + EA +L M + +N V
Sbjct: 426 AQLGALSIGKWVHGLIKSE-RLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVT 483
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLSNMYA 447
W ++++ +H + G+ A K +++ + P+ LS +YA
Sbjct: 484 WNAMITGYGLHGH---GKEALKLFYEMLQSGIPPTGVTFLSILYA 525
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 154/312 (49%), Gaps = 12/312 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH----WGSMDYACSIFRQ 90
LT+L L + ++ A ++ G ++ L + L+H G++ + +F +
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYD------LSSITKLTHKFFDLGAVAHVRQLFNK 71
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKE 149
+ +P F FN LIRGF + ++FLY + ++ + PDNFT+ A ++L+ +
Sbjct: 72 VSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERV 131
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G+ +H H G +LFV ++++++Y K + E A +F M ++ W+ +I+ +
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSR 191
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N + + +++F +M + + + L +VL+A L LG + +V
Sbjct: 192 NSYFEDSIRVFVDM-LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T LI +Y KCG KG LF + ++Y+ MISG + + + A+++F E+L G
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310
Query: 330 LEPDDVVYVGVL 341
+ VG++
Sbjct: 311 QRVNSSTLVGLI 322
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%)
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
L + +QI + G DL L + + V +F ++ + + ++ +I
Sbjct: 26 TLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIR 85
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NGL + L+ + + RP+ +SA + L +G H I + A
Sbjct: 86 GFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVA 145
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N+ V ++++D+Y K E +F +M ++ + ++ MISG + + ++++ +F +M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205
Query: 326 LREGLEPDDVVYVGVLSACS 345
L GL D VL+A +
Sbjct: 206 LDVGLSFDSTTLATVLTAVA 225
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/507 (39%), Positives = 316/507 (62%), Gaps = 1/507 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N+LI G V+E E+AL + +M R ++ D +T P++ + A ++ ++ + +H +
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K GFE V N+LI+MY K K++ A +F +M K V SW++++ ++ NG + E +K
Sbjct: 69 KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
LF +M + P++ + SVLSAC L +D G+ H +L+++ ++ V+ SL+ MY
Sbjct: 129 LFCKMRISGVY-PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMY 187
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG + F M + ++++ +I G A +G+GK +L + +M+ G +PD + ++
Sbjct: 188 AKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFI 247
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
G+L ACSH GL+ G F+ M Y I P +HY C++DL+GR+G L EA L+ M +
Sbjct: 248 GLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVV 307
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ VVW++LL+A +VH LE+GE+AAKNLF++ + YV+LSNMY+ A +W D A+I
Sbjct: 308 APDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARI 367
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M S+G+ + PG+S +E KV F+S+DR+HP + IY I ++ +K GY PD+
Sbjct: 368 RRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPDM 427
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
S L D D++ K L HS+KLA+AF L+ + QG+PIRI +NLR+C DCHT K S +
Sbjct: 428 SFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTSKV 487
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
Y R II+RD FH F +G CSC DYW
Sbjct: 488 YARHIILRDSNCFHHFTEGRCSCGDYW 514
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 36/310 (11%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + K ++ VH ++K GF + L+ A G +D A +F ++ +
Sbjct: 48 LNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYA--KQGKLDCAIMVFSKMVDK 105
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ +L+ G+ +EEA+ L+ +M GV PD ++ ACA+L + G QIH
Sbjct: 106 DVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIH 165
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ K G E L V NSL+ MY KC + A+ F M + V SW+A+I +A NG
Sbjct: 166 ATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGK 225
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
L+ + +M +P+ + +L AC+H G L G+ ++ +
Sbjct: 226 HSLQFYDQMIATGT-KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYG---------- 274
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+K G Y+ MI L G+ EA + ++M+ + PD
Sbjct: 275 ----IKPG----------------PEHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDA 311
Query: 335 VVYVGVLSAC 344
VV+ +L+AC
Sbjct: 312 VVWKALLAAC 321
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/480 (42%), Positives = 312/480 (65%), Gaps = 2/480 (0%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+ PD T +L ACA+L L+ G +H + ++G + +L V N++++MY KC+ +E A
Sbjct: 7 LRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQ 66
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F ++ +K V SW+++++ A +G + E L LF +M K P+E LV VLSAC
Sbjct: 67 EVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKI-EPDEITLVGVLSACAQT 125
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
GALD GK H + + ++++ET+L+DMY KCG ++ L +FR M + T++ MI
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
GLAMHG G++A+S+F +M + L PDDV ++ +L ACSHAGLV+EGL F MK +++I
Sbjct: 186 GGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQI 245
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P ++HYGCVVDL+ RA + +AL I++MPI+ N V+W +LL A + + ++ E +
Sbjct: 246 EPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXR 305
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
+ ++ YV+LSN+YA +W K+R +M +KG+ ++PG S +E+ +++FV
Sbjct: 306 RVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFV 365
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
+ DRSH + IY MI +M ++ + G+ P + VL D++E+EK L HS+KLAIA
Sbjct: 366 AGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIAL 425
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LI GSPIRI +NLR+CNDCH++ K+ S +Y REI+ RDR RFH FK+G+CSC D+W
Sbjct: 426 GLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 485
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 119/230 (51%), Gaps = 6/230 (2%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
NLR E ++++ C NLE K +H++ + G N + N ++
Sbjct: 6 NLRPDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDEN--LSVNNAILDMYCKCDDIE 63
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F +I E + +++ G K F+E+L L+ +M +EPD T + ACA
Sbjct: 64 SAQEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACA 123
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ AL +G IH + K CDL ++ +L++MY KC ++ A +F++M ++V +W+A
Sbjct: 124 QTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 183
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+I A +G + + LF +M +K P++ +++L AC+H G +D G
Sbjct: 184 MIGGLAMHGHGEDAISLFDQMEXDKLM-PDDVTFIALLCACSHAGLVDEG 232
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+D A +FR++ F +N +I G E+A+ L+++M + PD+ TF AL
Sbjct: 161 GSIDLALQVFRRMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALL 220
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQN--SLINMYGKCEKVEFASAIFKQMDQKS 196
AC+ + EG+ + K F+ + +++ ++++ + KV+ A A + M K+
Sbjct: 221 CACSHAGLVDEGLAMF-QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKA 279
Query: 197 VAS-WSAIIAAHASNG 211
+ W+ ++ A S G
Sbjct: 280 NSVLWATLLGACRSGG 295
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/574 (39%), Positives = 345/574 (60%), Gaps = 7/574 (1%)
Query: 35 LTILKTC--KNLEEF-KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L +LK C ++E K++H K+GF N F ++LV+ A +G + YA +F ++
Sbjct: 89 LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYA--KFGQISYARIVFDKL 146
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + ++I G+V+ + EAL ++ EM + V+PD ++ A ++ L +G
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IHG V K+G E + + SL MY K VE A F +M++ ++ W+A+I+ +A+NG
Sbjct: 207 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 266
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E +KLF EM + R + + S + A +G+L+L + G + ++ + V
Sbjct: 267 YGEEAIKLFREMITKNI-RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 325
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T LIDMY KCG + C+F +ADK + +SVMI G +HG G+EA+ +++EM + G+
Sbjct: 326 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 385
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+D ++G+L+AC ++GLV EG F M ++ I P QHY CVVDL+GRAG L +A +
Sbjct: 386 PNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYD 444
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I SMPI+ VW +LLSA K+H + +GEIAA+ LF ++ ++ YV LSN+YA A
Sbjct: 445 FIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHL 504
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA +R M KGLN+ G S +E+ + F DRSHP I+E + ++E +LK
Sbjct: 505 WTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKA 564
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P + VL D++ +E E L HS++LA+A+ +I + G+ +RI +NLR C +CH+
Sbjct: 565 AGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSA 624
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS + +REII+RD KRFH FKDG CSC D+W
Sbjct: 625 IKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 1/272 (0%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
H+G ++YA FR++ EP +N +I+G+ ++ + + +Y +M V P+ FTF
Sbjct: 31 HFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLY 90
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ KAC G QIHG FK GF ++FVQNSL++MY K ++ +A +F ++ ++
Sbjct: 91 VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRT 150
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW++II+ + NG E L +F EM +P+ LVSV++A T++ L GK H
Sbjct: 151 VVSWTSIISGYVQNGDPMEALNVFKEMRQCNV-KPDWIALVSVMTAYTNVEDLGQGKSIH 209
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
G + + + SL MY K G +E F M + ++ MISG A +G G+
Sbjct: 210 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 269
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
EA+ +F EM+ + + D + + A + G
Sbjct: 270 EAIKLFREMITKNIRVDSITMRSAVLASAQVG 301
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 333/582 (57%), Gaps = 11/582 (1%)
Query: 28 RLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
RL L IL L+E + ++H+ K G + + + + ++ S G +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL--YSKCGKIKMG 275
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++FR+ +P +N +I G+ E E +L L+ E+ G + T +L L
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ IHG+ K F V +L +Y K ++E A +F + +KS+ SW+A+I
Sbjct: 336 MLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ + NGL + + LF EM + + P + +LSAC LGAL LGK H L+R+
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTD 450
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++ V T+LI MY KCG + + LF +M K ++T++ MISG +HGQG+EAL+IF
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EML G+ P V ++ VL ACSHAGLV EG F+ M Y P+V+HY C+VD++GRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L AL+ I++M I+ VW +LL A ++H + + ++ LF+++ + +VLLS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+++ + + A +R + L ++PG++L+E+ + F S D+SHP IYE +
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E +++ GY P+ L DV+E+E+ +K HS++LAIAF LI G+ IRI +NLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT TKLIS I ER I+VRD RFH FKDG CSC DYW
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L K ++ + HA ++ GF + + L T LS G++ YA IF + P
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKL--TQRLSDLGAIYYARDIFLSVQRP 81
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEGMQI 153
F FN L+RGF +L ++ + + ++P++ T+ A + + + G I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG G + +L + ++++ MY K +VE A +F +M +K W+ +I+ + N ++
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E +++F ++ NE C R + + L+ +L A L L LG H + + V T
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
I +Y KCG ++ G LFR + Y+ MI G +G+ + +LS+F E++ G
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 334 DVVYVGVLSACSHAGLV 350
V ++ H L+
Sbjct: 322 SSTLVSLVPVSGHLMLI 338
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/570 (39%), Positives = 344/570 (60%), Gaps = 11/570 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L + ++VH H+L+ GF +PF A+ L+ S + S+D A +F + + +N L
Sbjct: 85 SLLDAQRVHRHLLENGFDQDPFLATKLINM--YSFFDSIDNARKVFDKTRNRTIYVYNAL 142
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK----LQALKEGMQIHGHVF 158
R EE L +Y M G+ D FT+ + KAC + L +G +IH H+
Sbjct: 143 FRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHIL 202
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+ G++ + + +L++MY K V AS +F QM K+V SWSA+IA +A NG E L+
Sbjct: 203 RHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALE 262
Query: 219 LFGEM---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
LF E+ + C P +VSVL AC L AL+ G+ HG ++R + V ++L+
Sbjct: 263 LFRELMLETQDLC--PNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALV 320
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY +CG LE G +F M + ++++ +IS +HG GK+A+ IF EM G+EP +
Sbjct: 321 TMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPI 380
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+V VL ACSHAGLV+EG + F+ M + + I P+V+HY C+VDL+GRA L EA ++I++
Sbjct: 381 SFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIEN 440
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
M I+ VW SLL + ++H N+E+ E A+ LF + + +YVLL+++YA A W V
Sbjct: 441 MRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGV 500
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
+++ + ++GL + PG S +EV RK+Y FVS D +P + ++ ++ ++ +LK EGY
Sbjct: 501 KRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYV 560
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P VL D+ EK + GHS+KLA+AF LI+ S+G IRI ++LR+C DCH++TK I
Sbjct: 561 PQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSLRLCEDCHSFTKFI 620
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S +EI+VRD RFH F+DG CSC DYW
Sbjct: 621 SKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 158/329 (48%), Gaps = 23/329 (6%)
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
D N LI+ K+ +AL E+ P T+ L +C +L + ++H H+
Sbjct: 41 DNNKLIQSLCKQGNLTQAL----ELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHL 96
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ GF+ D F+ LINMY + ++ A +F + +++ ++A+ A + G E L
Sbjct: 97 LENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVL 156
Query: 218 KLFGEMNNEKCWRPEESILVS-VLSACT----HLGALDLGKCTHGSLIRNISALNVIVET 272
++ MN+ P + + VL AC + L+ G+ H ++R+ V + T
Sbjct: 157 NMYRRMNSIGI--PSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMT 214
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE--GL 330
+L+DMY K GC+ C+F M K +++S MI+ A +G+ EAL +F E++ E L
Sbjct: 215 TLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDL 274
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
P+ V V VL AC+ + +G L R L+ I+P + +V + R G L
Sbjct: 275 CPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLD-SILPVIS---ALVTMYARCGKLE 330
Query: 388 EALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ M + DVV W SL+S+ VH
Sbjct: 331 LGQRVFDQM--DKRDVVSWNSLISSYGVH 357
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 327/539 (60%), Gaps = 5/539 (0%)
Query: 70 VATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
VAT L + G + A +F + + +N +I G+ + + EAL L+N M E G
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
V+ + + A +AC +L L EGM++H + ++G + ++ V N+LI MY KC++V+ AS
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F ++D+++ SW+A+I A NG + ++LF M E +P+ LVSV+ A +
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV-KPDSFTLVSVIPALADI 376
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+ HG IR +V V T+LIDMY KCG + LF ++ +T++ MI
Sbjct: 377 SDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI 436
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
G HG GK A+ +F EM G+ P++ ++ VLSACSHAGLV+EG F MK +Y +
Sbjct: 437 HGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGL 496
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P ++HYG +VDL+GRAG L EA IQ MP+ V+ ++L A K+H N+E+ E +A+
Sbjct: 497 EPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQ 556
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
+F++ +VLL+N+YA A W DVA++RT M GL ++PG+S++++ +++ F
Sbjct: 557 KIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFY 616
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
S +H IY + ++ ++K GY PD + DV++D K + L HS+KLAIAF
Sbjct: 617 SGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFG 675
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LI + G+ I+I +NLR+CNDCH TKLIS++ REII+RD +RFH FKDG CSC DYW
Sbjct: 676 LIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 124/244 (50%)
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ AL + M G P TF +L K CA L G +H + G + +
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
+L NMY KC + A +F +M + +W+A++A +A NGL +++ M E+ R
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P+ LVSVL AC + AL + H IR+ V V T+++D Y KCG + +
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F M K ++++ MI G A +G +EAL++F+ M+ EG++ DV + L AC G +
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278
Query: 351 NEGL 354
+EG+
Sbjct: 279 DEGM 282
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/585 (37%), Positives = 343/585 (58%), Gaps = 13/585 (2%)
Query: 27 LRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+RL E +++K C NL+E + ++H V+K+GF ++ + L+ A S +M
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV--AYSKCTAMLD 348
Query: 84 ACSIFRQIDEPG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F++I G + +I GF++ EEA+ L++EM +GV P+ FT+ + A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ ++H V K +E V +L++ Y K KVE A+ +F +D K + +WSA
Sbjct: 409 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLIR 261
++A +A G +K+FGE+ +P E S+L+ C A + GK HG I+
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ ++ V ++L+ MY K G +E +F+ +K ++++ MISG A HGQ +AL +
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM + ++ D V ++GV +AC+HAGLV EG FD M + +I PT +H C+VDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L +A+++I++MP +WR++L+A +VH E+G +AA+ + + + YVL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSNMYA + W + AK+R M + + + PG+S +EV K Y F++ DRSHP D IY
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + +LK GY PD S VL+D+D++ K L HS++LAIAF LI +GSP+ I +N
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 823
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF-KDGTCSCRDYW 605
LR+C DCH KLI+ I EREI+VRD RFH F DG CSC D+W
Sbjct: 824 LRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 182/368 (49%), Gaps = 16/368 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +K+GF + ++LV T + +F ++ E + TLI G+
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDT--YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +E L L+ M G +P++FTF A A+ G+Q+H V K G + +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLIN+Y KC V A +F + + KSV +W+++I+ +A+NGL E L +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
R ES SV+ C +L L + H S+++ + + T+L+ Y KC +
Sbjct: 291 V-RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 288 LCLFRMMADKC---QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
L LF+ + C ++++ MISG + +EA+ +FSEM R+G+ P++ Y +L+A
Sbjct: 350 LRLFKEIG--CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+++ + +K Y TV ++D + G + EA ++ I D+V
Sbjct: 408 P---VISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSG--IDDKDIV 460
Query: 405 -WRSLLSA 411
W ++L+
Sbjct: 461 AWSAMLAG 468
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+L+ GF ++ +EA L+ + G+E D F ++ K A L G Q+H K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
GF D+ V SL++ Y K + +F +M +++V +W+ +I+ +A N + E L LF
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M NE +P + L G G H +++N + V SLI++Y+K
Sbjct: 183 MRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + K LF K +T++ MISG A +G EAL +F M + + + V
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 341 LSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ C+ H +V G L FD+ R V + C L +A
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFL-FDQ---NIRTALMVAYSKCTAML--------DA 349
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
L L + + N V W +++S
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISG 371
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/574 (39%), Positives = 345/574 (60%), Gaps = 7/574 (1%)
Query: 35 LTILKTC--KNLEEF-KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L +LK C ++E K++H K+GF N F ++LV+ A +G + YA +F ++
Sbjct: 104 LYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYA--KFGQISYARIVFDKL 161
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + ++I G+V+ + EAL ++ EM + V+PD ++ A ++ L +G
Sbjct: 162 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 221
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IHG V K+G E + + SL MY K VE A F +M++ ++ W+A+I+ +A+NG
Sbjct: 222 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 281
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E +KLF EM + R + + S + A +G+L+L + G + ++ + V
Sbjct: 282 YGEEAIKLFREMITKNI-RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 340
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T LIDMY KCG + C+F +ADK + +SVMI G +HG G+EA+ +++EM + G+
Sbjct: 341 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 400
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+D ++G+L+AC ++GLV EG F M ++ I P QHY CVVDL+GRAG L +A +
Sbjct: 401 PNDGTFIGLLTACKNSGLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYD 459
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I SMPI+ VW +LLSA K+H + +GEIAA+ LF ++ ++ YV LSN+YA A
Sbjct: 460 FIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHL 519
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA +R M KGLN+ G S +E+ + F DRSHP I+E + ++E +LK
Sbjct: 520 WTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKA 579
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P + VL D++ +E E L HS++LA+A+ +I + G+ +RI +NLR C +CH+
Sbjct: 580 AGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSA 639
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS + +REII+RD KRFH FKDG CSC D+W
Sbjct: 640 IKLISKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 3/305 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L+ +V+ ++ G F + C H+G ++YA FR++ EP +N +I
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACL--HFGDVNYAHKAFREVSEPDILLWNAII 72
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+G+ ++ + + +Y +M V P+ FTF + KAC G QIHG FK GF
Sbjct: 73 KGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFG 132
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
++FVQNSL++MY K ++ +A +F ++ ++V SW++II+ + NG E L +F EM
Sbjct: 133 SNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEM 192
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+P+ LVSV++A T++ L GK HG + + + SL MY K G
Sbjct: 193 RQCNV-KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGL 251
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E F M + ++ MISG A +G G+EA+ +F EM+ + + D + + A
Sbjct: 252 VEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLA 311
Query: 344 CSHAG 348
+ G
Sbjct: 312 SAQVG 316
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/531 (42%), Positives = 333/531 (62%), Gaps = 14/531 (2%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKE-VEFEEALFLYNEMF---ERGVEPDNFTFPALFKACA 142
I R I P +F +N LI+ + K + ++A+ LY + E + PD T+P + KACA
Sbjct: 37 ILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACA 96
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWS 201
L +L EG Q+H HV K+GFE D ++ NSLI+ Y C +E A +F +M + ++V SW+
Sbjct: 97 YLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWN 156
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+I ++A G + L +F EM K + P+ + SV+ AC LG+L LG H +++
Sbjct: 157 VMIDSYAKVGDYDIVLIMFCEM--MKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLK 214
Query: 262 NIS---ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+V+V T L+DMY KCG LE +F M+ + +++ +I G A+HG+ K A
Sbjct: 215 KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAA 274
Query: 319 LSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
L F M++ E + P+ + +VGVLSAC+H+G+V+EGL+ F+ M EY + P++ HYGC+V
Sbjct: 275 LDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLV 334
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQIN-SHH 435
DL RAG + EAL ++ MPI+ + V+WRSLL A K H ++E+ E AK +F+ N S
Sbjct: 335 DLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVC 394
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVLLS +YA A RW DV +R M KG+++ PG SL+E+ ++F + D +HP
Sbjct: 395 GGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQS 454
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
+IY+ +++++ +L+ GY PD S L D + K+ ++ HS++LAIAF L++
Sbjct: 455 KDIYKFMNEIQEKLESVGYLPDYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSM 514
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+CNDCH TKLIS IY EIIVRDR RFH FKDG+CSC DYW
Sbjct: 515 PIRVFKNLRVCNDCHKVTKLISRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 147/323 (45%), Gaps = 59/323 (18%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIF-R 89
+LK C +L E K+VHAHVLK GF + + ++L+ A+C G ++ A +F R
Sbjct: 91 VLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASC-----GYLETARKVFDR 145
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ +N +I + K +++ L ++ EM + EPD +T ++ +AC L +L
Sbjct: 146 MCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMM-KVYEPDCYTMQSVIRACGGLGSLSL 204
Query: 150 GMQIHGHVFK---VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
GM +H V K CD+ V L++MY KC +E A +F+ M + V+SW++II
Sbjct: 205 GMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILG 264
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
A +G L F M + P V VLSAC H G +D
Sbjct: 265 FAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVD---------------- 308
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSI 321
+GL F MM + + Y ++ A G +EAL++
Sbjct: 309 -------------------EGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNV 349
Query: 322 FSEMLREGLEPDDVVYVGVLSAC 344
SEM ++PD V++ +L AC
Sbjct: 350 VSEM---PIKPDAVIWRSLLDAC 369
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 340/574 (59%), Gaps = 9/574 (1%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + VHA V + GF + F + L+A A + A ++F +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR--RLGSARTVFEGLPL 182
Query: 94 P--GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P + ++ + + E EAL ++++M + V+PD ++ A LQ LK+G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH V K+G E + + SL MY KC +V A +F +M ++ W+A+I+ +A NG
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + +F EM N+ RP+ + S +SAC +G+L+ + + + R+ +V +
Sbjct: 303 YAREAIDMFHEMINKDV-RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++LIDM+ KCG +E +F D+ + +S MI G +HG+ +EA+S++ M R G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+DV ++G+L AC+H+G+V EG F+RM +++I P QHY CV+DL+GRAG L +A E
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I+ MP+Q VW +LLSA K H ++E+GE AA+ LF I+ + YV LSN+YA A+
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA++R M KGLN+ G S VEV ++ F D+SHP ++ I + +E +LK
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ + L D++++E E L HS+++AIA+ LI QG+P+RI +NLR C +CH
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS + +REI+VRD RFH FKDG CSC DYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 221/415 (53%), Gaps = 10/415 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+++ + + + K++HA +L G ++ F + L+ A S +G + +A +F + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +N +IRG+ + F++AL +Y+ M V PD+FTFP L KAC+ L L+ G +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWSAIIAAHASNGLW 213
VF++GF+ D+FVQN LI +Y KC ++ A +F+ + ++++ SW+AI++A+A NG
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L++F +M +P+ LVSVL+A T L L G+ H S+++ + + S
Sbjct: 204 MEALEIFSQMRKMDV-KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L MY KCG + LF M + ++ MISG A +G +EA+ +F EM+ + + PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ +SAC+ G + + ++ + + +YR V ++D+ + G + E L
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYR--DDVFISSALIDMFAKCGSV-EGARL 379
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ + ++ VVW +++ +H I+ + HP+D L + A
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAR-EAISLYRAMERGGVHPNDVTFLGLLMA 433
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/596 (37%), Positives = 344/596 (57%), Gaps = 36/596 (6%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
K+LE KKV +++ + G + + LV G + A IF + +NT
Sbjct: 245 KDLELGKKVCSYISELGMELSTIMVNALVDM--YMKCGDICAARQIFDECANKNLVMYNT 302
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
++ +V + L + +EM ++G PD T + ACA+L L G H +V + G
Sbjct: 303 IMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNG 362
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG---------- 211
E + N++I+MY KC K E A +F+ M K+V +W+++IA +G
Sbjct: 363 LEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFD 422
Query: 212 ---------------------LWSECLKLFGEMNNEKCWRPEESI-LVSVLSACTHLGAL 249
++ E ++LF EM N+ P + + +V + SAC +LGAL
Sbjct: 423 EMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGI--PGDRVTMVGIASACGYLGAL 480
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
DL K + +N +++ + T+L+DM+ +CG + +F+ M + ++ I +
Sbjct: 481 DLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVM 540
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
AM G + A+ +F+EML + ++PDDVV+V +L+ACSH G V++G F M+ + I P
Sbjct: 541 AMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPH 600
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
+ HYGC+VDL+GRAG+L EA++LIQSMPI+ NDVVW SLL+A + H N+E+ AA+ L
Sbjct: 601 IVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLT 660
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD 489
Q+ +VLLSN+YA A +W DVA++R +M KG+ + PG S +EV +++F S D
Sbjct: 661 QLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGD 720
Query: 490 RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH 549
SH +I M+ ++ +L GY PD + VL DVDE EK L HS+KLA+A+ LI
Sbjct: 721 ESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLIT 780
Query: 550 LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
QG PIR+ +NLRMC+DCH++ KL+S +Y REI VRD R+H FK+G CSCRDYW
Sbjct: 781 TGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 202/392 (51%), Gaps = 32/392 (8%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL----VATCALSHWGSMDYACSIFRQID 92
+L CK L+E K++H ++K G + ASNL ++ + S+DYA + F D
Sbjct: 31 LLVNCKTLKELKQLHCDMMKKGLLCHK-PASNLNKLIASSVQIGTLESLDYARNAFGDDD 89
Query: 93 EPGA--FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
A F +N LIRG+ ++A+ LY +M G+ PD +TFP L AC+K+ AL EG
Sbjct: 90 GNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEG 149
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+Q+HG V K+G E D+FV NSLI+ Y +C KV+ +F M +++V SW+++I ++
Sbjct: 150 VQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGR 209
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
L E + LF +M E P +V V+SAC L L+LGK + L+ I+
Sbjct: 210 DLSKEAVSLFFQM-GEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIM 268
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+DMY+KCG + +F A+K + Y+ ++S H + L I EML++G
Sbjct: 269 VNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGP 328
Query: 331 EPDDVVYVGVLSAC-----------SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
PD V + ++AC SHA ++ GL +D + ++D+
Sbjct: 329 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNIS------------NAIIDM 376
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G A ++ + MP + V W SL++
Sbjct: 377 YMKCGKREAACKVFEHMP-NKTVVTWNSLIAG 407
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 208/440 (47%), Gaps = 47/440 (10%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
L E +VH VLK G + F +++L+ A C G +D +F + E +
Sbjct: 146 LSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAEC-----GKVDLGRKLFDGMLERNVVSWT 200
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+LI G+ +EA+ L+ +M E GVEP+ T + ACAKL+ L+ G ++ ++ ++
Sbjct: 201 SLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISEL 260
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G E + N+L++MY KC + A IF + K++ ++ I++ + + S+ L +
Sbjct: 261 GMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVIL 320
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
EM +K RP++ ++S ++AC LG L +GK +H ++RN + ++IDMY+K
Sbjct: 321 DEML-QKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMK 379
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG------------------------- 315
CG E +F M +K +T++ +I+GL G
Sbjct: 380 CGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGAL 439
Query: 316 ------KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN-EGLLCFDRMKLEYRIVP 368
+EA+ +F EM +G+ D V VG+ SAC + G ++ +C K + +
Sbjct: 440 VQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHV-- 497
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKN 427
+Q +VD+ R G A+ + + M ++ DV W + + + N E G I N
Sbjct: 498 DLQLGTALVDMFSRCGDPSSAMHVFKRM--EKRDVSAWTAAIGVMAMEGNTE-GAIELFN 554
Query: 428 LFQINSHHPSDYVLLSNMYA 447
P D V ++ + A
Sbjct: 555 EMLEQKVKPDDVVFVALLTA 574
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 44/306 (14%)
Query: 41 CKNLEEFKKVHAHVL-KWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
C E KV H+ K WN A L G M+ A IF ++ E +
Sbjct: 380 CGKREAACKVFEHMPNKTVVTWNSLIA-------GLVRDGDMELAWRIFDEMLERDLVSW 432
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
NT+I V+ FEEA+ L+ EM +G+ D T + AC L AL + ++ K
Sbjct: 433 NTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEK 492
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
DL + +L++M+ +C A +FK+M+++ V++W+A I A G ++L
Sbjct: 493 NDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIEL 552
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMY 278
F EM +K +P++ + V++L+AC+H G++D G+ S+ + IV ++D+
Sbjct: 553 FNEMLEQKV-KPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLL 611
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+ G LE+ + L + M +EP+DVV+
Sbjct: 612 GRAGLLEEAVDLIQSMP----------------------------------IEPNDVVWG 637
Query: 339 GVLSAC 344
+L+AC
Sbjct: 638 SLLAAC 643
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 338/579 (58%), Gaps = 8/579 (1%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH-WGSMDYACSIFRQ 90
+ ++ +K+ + ++HAH+++ P + ++ ALS Y+ F Q
Sbjct: 4 ETVISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQ 63
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ P +NT+IR ++ L LY +M RG+ D + K+C + L G
Sbjct: 64 LSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGG 123
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+Q+H ++FK G + D + +++++Y C++ A +F +M + +W+ +I+ N
Sbjct: 124 VQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRN 183
Query: 211 GLWSECLKLFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISAL 266
+ L LF M KC P++ + +L AC HL AL+ G+ HG ++ AL
Sbjct: 184 NRTRDALSLFDVMQGSSYKC-EPDDVTCLLLLQACAHLNALEFGERIHGYIMERGYRDAL 242
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
N+ SLI MY +CGCL+K +F+ M +K +++S MISGLAM+G G+EA+ F EML
Sbjct: 243 NLC--NSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEML 300
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
R G+ PDD + GVLSACS++G+V+EG+ F RM E+ + P V HYGC+VDL+GRAG+L
Sbjct: 301 RIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLL 360
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
+A +LI SM ++ + +WR+LL A ++H ++ +GE +L ++ + DYVLL N+Y
Sbjct: 361 DKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIY 420
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
+ A W VA++R M +K + +PG S +E+ V++FV D SH IYE + ++
Sbjct: 421 SSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVSHSRNREIYETLDEIN 480
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
QL+ GY ++S L +D+ EK L HS+KLA+AF ++ G+ +R+A NLR+C
Sbjct: 481 HQLRIAGYVVELSSELHKMDDKEKGYVLSHHSEKLAVAFGVLATPPGTILRVASNLRVCV 540
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + KL S +Y R++++RD RFH F+ G CSC DYW
Sbjct: 541 DCHNFLKLFSGVYNRDVVLRDHNRFHHFRGGRCSCSDYW 579
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 331/562 (58%), Gaps = 3/562 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L K++H + LK F ++ A+ VA+ A GS+ YA +F I +N LI
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVASYA--KCGSLSYAQRVFHGIRSKTLNSWNALI 452
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ + + +L + +M G+ PDNFT +L AC+KL++L+ G ++HG + + E
Sbjct: 453 GGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 512
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV S++++Y C ++ +F M+ S+ SW+ +I H NG L LF +M
Sbjct: 513 RDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQM 572
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+P +++V AC+ L +L LG+ H ++++ N + S+IDMY K G
Sbjct: 573 VLYGI-QPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGA 631
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+ + +F + +K +++ MI G MHG+ KEA+ +F EM R G PDD+ ++GVL+A
Sbjct: 632 ITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTA 691
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C+H+GL++EGL D+MK + + P ++HY CV+D++GRAG L AL + M + +
Sbjct: 692 CNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVG 751
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W SLLS ++H NLE+GE A LF + P +YVLLSN+YA +W DV ++R M
Sbjct: 752 IWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMK 811
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
L + G S +E+ KV+ FV +R ++ I + +E ++ GY PD S V
Sbjct: 812 EMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQH 871
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D+ E+EK E+L+GHS+KLAI + LI S+G+ +R+ +NLR+C DCH KLIS + EREI
Sbjct: 872 DLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREI 931
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
+VRD KRFH F G CSC DYW
Sbjct: 932 VVRDNKRFHHFNKGFCSCGDYW 953
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 135/269 (50%), Gaps = 16/269 (5%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPAL 137
GS D + S F + F +N +I + + + E L ++ +M + + PDNFTFP +
Sbjct: 134 GSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCV 193
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
KACA + + G+ +HG V K G DLFV N+L++ YG V A +F M ++++
Sbjct: 194 IKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNL 253
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+++I + NG ++ + P+ + +V+VL C + +GK HG
Sbjct: 254 VSWNSMIRVFSDNG-------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHG 300
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
++ ++V +L+DMY K GC+ +F++ +K ++++ M+ G + G
Sbjct: 301 WAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHG 360
Query: 318 ALSIFSEML--REGLEPDDVVYVGVLSAC 344
+ +ML E ++ D+V + + C
Sbjct: 361 TFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 18/313 (5%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++K C + + VH V+K G + F + LV+ +H G + A +F + E
Sbjct: 193 VIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYG-TH-GFVSDALKLFDIMPE 250
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N++IR F ++ F+ PD T + CA+ + + G +
Sbjct: 251 RNLVSWNSMIRVFSDN--GDDGAFM----------PDVATVVTVLPVCAREREIGVGKGV 298
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG K+ + +L V N+L++MY K + + IFK + K+V SW+ ++ ++ G
Sbjct: 299 HGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDI 358
Query: 214 SECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
L +M + + +E +++ + C L K H ++ + ++
Sbjct: 359 HGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLAN 418
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+ + Y KCG L +F + K +++ +I G A + +L +M GL P
Sbjct: 419 AFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLP 478
Query: 333 DDVVYVGVLSACS 345
D+ +LSACS
Sbjct: 479 DNFTVCSLLSACS 491
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 137 LFKACAKLQALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L +A K + ++ G +IH V D + +I MY C + + + F + K
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ W+A+I++++ N L+ E L++F +M ++ P+ V+ AC + + +G
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +++ ++ V +L+ Y G + L LF +M ++ ++++ MI
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI--------- 260
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEG--------LLCFDR-MKLEYR 365
+FS+ +G PD V VL C+ + G L D+ + +
Sbjct: 261 ----RVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316
Query: 366 IVPTVQHYGCVVD 378
++ +GC++D
Sbjct: 317 LMDMYSKWGCIID 329
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/574 (37%), Positives = 341/574 (59%), Gaps = 6/574 (1%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C L++ +H + +K G ++ F + L+ A +G + A +IF Q+
Sbjct: 245 SLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYA--KFGELRSAETIFNQMK 302
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N+L+ F + + AL +YN+M GV PD T +L A+L
Sbjct: 303 VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRS 362
Query: 153 IHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IHG V + F D+ + N++I+MY K ++ A +F+ + K V SW+++I ++ NG
Sbjct: 363 IHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNG 422
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L +E + ++ M P + VS+L+A + LGAL G HG LI+N ++ V
Sbjct: 423 LANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS 482
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T L+DMY KCG L L LF + + ++++ +IS +HG G +A+ +F EM EG++
Sbjct: 483 TCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVK 542
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD + +V +LSACSH+GLV+EG CF M+ Y I P+++HYGC+VDL GRAG L +A
Sbjct: 543 PDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFN 602
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+++MP++ + VW +LL A ++H N+E+ + +L ++ S + YVLLSN+YA+
Sbjct: 603 FVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGH 662
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W V ++R+ +GL ++PG+S +EV +K+ F + +++HP + IY + + ++K
Sbjct: 663 WEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKS 722
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD + VL+DV++DEK L HS++LA+AF +I + ++I +NLR+C DCH
Sbjct: 723 IGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNA 782
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I EREIIVRD RFH FKDG CSC DYW
Sbjct: 783 TKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 201/386 (52%), Gaps = 17/386 (4%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+++ C NL++ +KVH VLK GF + + A++ + S +G + AC++F +
Sbjct: 148 VIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHF--YSRFGFVSLACNLFDNMMIRDI 205
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N +I GF + EAL +++EM + V D+ T +L C +L + G+ IH +
Sbjct: 206 GTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVY 265
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
K+G E DLFV N+LINMY K ++ A IF QM + + SW++++AA N
Sbjct: 266 AIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIA 325
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSLI 275
L ++ +M++ P+ LVS+ S LG + HG + R L ++ + ++I
Sbjct: 326 LGVYNKMHSIGV-VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAII 384
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-LREGLEPDD 334
DMY K G ++ +F + K ++++ +I+G + +G EA+ ++S M G P+
Sbjct: 385 DMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQ 444
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGEA 389
+V +L+A S G + +G MK +++ ++ C+VD+ G+ G L +A
Sbjct: 445 GTWVSILTAHSQLGALKQG------MKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADA 498
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVH 415
L L +P Q+ V W +++S +H
Sbjct: 499 LSLFYEVP-HQSSVSWNAIISCHGLH 523
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 183/379 (48%), Gaps = 14/379 (3%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I C + K++HA ++ G + F ++ L+ A G + +A F QI
Sbjct: 49 IFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAF--LGDIPHARLTFDQIQTKDV 106
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +N++I + + F A+ +NE ++ D++TFP + +AC L +G ++H
Sbjct: 107 YTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHC 163
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
V K+GFECD+++ S I+ Y + V A +F M + + +W+A+I+ NG +E
Sbjct: 164 LVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAE 223
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L++F EM K + + S+L C L + G H I+ ++ V +LI
Sbjct: 224 ALEVFDEM-RFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALI 282
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
+MY K G L +F M + ++++ +++ + + AL ++++M G+ PD +
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLL 342
Query: 336 VYVGVLSACSHAG--LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V + S + G L + + F + + + + ++D+ + G + A ++
Sbjct: 343 TLVSLASVAAELGNFLSSRSIHGFVTRRCWF--LHDIALGNAIIDMYAKLGFIDSARKVF 400
Query: 394 QSMPIQQNDVV-WRSLLSA 411
+ +P++ DV+ W SL++
Sbjct: 401 EGLPVK--DVISWNSLITG 417
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 14/287 (4%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
E F +F C K+ K Q+H + G +F+ LIN Y + A
Sbjct: 40 EKREIDFNRIFLYCTKVHLAK---QLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARL 96
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
F Q+ K V +W+++I+A+A G + + F E + + + V+ AC G
Sbjct: 97 TFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---G 153
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
LD G+ H +++ +V + S I Y + G + LF M + T++ MIS
Sbjct: 154 NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMIS 213
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF---DRMKLEY 364
G ++G+ EAL +F EM + + D V +L C + G+L ++ LE+
Sbjct: 214 GFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEF 273
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ ++++ + G L A + M + ++ V W SLL+A
Sbjct: 274 DLFVC----NALINMYAKFGELRSAETIFNQMKV-RDIVSWNSLLAA 315
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/591 (37%), Positives = 340/591 (57%), Gaps = 40/591 (6%)
Query: 50 VHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
VH +K F + + ++LV C G + A +F+ I +N++I F
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRFYGAC-----GDLSMAERLFKGISCKDVVSWNSMISAF 202
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ E+AL L+ +M V P++ T + ACAK L+ G + ++ + G + DL
Sbjct: 203 AQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDL 262
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQ-------------------------------K 195
+ N++++MY KC V+ A +F +M + K
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK 322
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+A+W+ +I+A+ NG E L +F E+ K +P+E LVS LSAC LGA+DLG
Sbjct: 323 EIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWI 382
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + R LN + +SL+DMY KCG LEK L +F + ++ +S MI+GL MHG+G
Sbjct: 383 HVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRG 442
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
K A+ +F EM ++P+ V + VL ACSHAGLV+EG + F M+ Y +VP ++HY C
Sbjct: 443 KAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYAC 502
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD++GRAG L EA+ELI M + VW +LL A +H N+E+GE+A+ L ++ +
Sbjct: 503 MVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRN 562
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
VLLSN+YA+ RW V+++R M L + PG S +E V++F+ D +HP
Sbjct: 563 HGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLS 622
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGS 554
NIY + ++ +LK GY P+ S +L+ ++ED+ +E+ L HS+KLAIAF L+ L+
Sbjct: 623 SNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPSQ 682
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+C DCH + KL+S +Y+R+I++RDR RFH F+DG CSC DYW
Sbjct: 683 PIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 223/424 (52%), Gaps = 38/424 (8%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
NL + + L+ + C + ++ K+VHA +L+ G F++PF AS L ALS + ++DYA
Sbjct: 20 NLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYAR 79
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKL 144
++F QI +P + +NTLIR + + ++ ++ ++ ++ + P+ FTFP + KA ++L
Sbjct: 80 NLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASEL 139
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+A + G +HG K+ F DL++ NSL+ YG C + A +FK + K V SW+++I
Sbjct: 140 KASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMI 199
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+A A + L+LF +M E P +V VLSAC L+ G+ + R
Sbjct: 200 SAFAQGNCPEDALELFLKMERENV-MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGI 258
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA-------------- 310
+++ + +++DMY KCG ++ LF M ++ ++++M+ G A
Sbjct: 259 KVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNA 318
Query: 311 -----------------MHGQGKEALSIFSEM-LREGLEPDDVVYVGVLSACSHAGLVNE 352
+G+ KEAL+IF+E+ L + +PD+V V LSAC+ G ++
Sbjct: 319 MPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDL 378
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSA 411
G +K E IV +VD+ + G L +ALE+ S +++ DV VW ++++
Sbjct: 379 GGWIHVYIKRE-GIVLNCHLISSLVDMYAKCGSLEKALEVFYS--VEERDVYVWSAMIAG 435
Query: 412 SKVH 415
+H
Sbjct: 436 LGMH 439
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/539 (39%), Positives = 327/539 (60%), Gaps = 5/539 (0%)
Query: 70 VATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
VAT L + G + A +F + + +N +I G+ + + EAL L+N M E G
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
V+ + + A +AC +L L EGM++H + ++G + ++ V N+LI MY KC++V+ AS
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F ++D+++ SW+A+I A NG + ++LF M E +P+ LVSV+ A +
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENV-KPDSFTLVSVIPALADI 376
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+ HG IR +V V T+LIDMY KCG + LF ++ +T++ MI
Sbjct: 377 SDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI 436
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
G HG GK A+ +F EM G+ P++ ++ VLSACSHAGLV+EG F MK +Y +
Sbjct: 437 HGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGL 496
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P ++HYG +VDL+GRAG L EA IQ MP+ V+ ++L A K+H N+E+ E +A+
Sbjct: 497 EPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQ 556
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
+F++ +VLL+N+YA A W DVA++RT M GL ++PG+S++++ +++ F
Sbjct: 557 KIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFY 616
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
S +H IY + ++ ++K GY PD + DV++D K + L HS+KLAIAF
Sbjct: 617 SGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFG 675
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LI + G+ I+I +NLR+CNDCH TKLIS++ REII+RD +RFH FKDG CSC DYW
Sbjct: 676 LIRTAPGTTIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 129/260 (49%)
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A D + +R + AL + M G P TF +L K CA L G +H
Sbjct: 23 AADDHHARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVH 82
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ G + + +L NMY KC + A +F +M + +W+A++A +A NGL
Sbjct: 83 AQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLAR 142
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+++ M E+ RP+ LVSVL AC + AL + H IR+ V V T++
Sbjct: 143 MAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAI 202
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+D Y KCG + +F M K ++++ MI G A +G +EAL++F+ M+ EG++ D
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTD 262
Query: 335 VVYVGVLSACSHAGLVNEGL 354
V + L AC G ++EG+
Sbjct: 263 VSVLAALQACGELGCLDEGM 282
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 336/606 (55%), Gaps = 43/606 (7%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
++ K+ ++HA +L+ G +P N + + G + ++ ++F + P
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHHHPIL--NFKLQRSYASLGHLHHSVTLFHRTPNPNV 86
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F + +I F AL Y++M ++P+ FT +L KAC L +H H
Sbjct: 87 FLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACT----LHPARAVHSH 142
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
K G L+V L++ Y + V A +F M ++S+ S++A++ +A +G+ E
Sbjct: 143 AIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEA 202
Query: 217 LKLFGEMNNEK--CW-----------------------------------RPEESILVSV 239
LF M + CW RP E +V+V
Sbjct: 203 RVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAV 262
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
LS+C +GAL+ GK H + N +NV V T+L+DMY KCG LE +F +M K
Sbjct: 263 LSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDV 322
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
+ ++ MI G +HG EAL +F EM G++P D+ +V VL+AC+HAGLV++G FD
Sbjct: 323 VAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDS 382
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
MK Y + P V+HYGC+V+L+GRAG + EA +L++SM ++ + V+W +LL A ++H N+
Sbjct: 383 MKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVS 442
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+GE A+ L YVLLSNMYA A+ W VAK+R+ M G+ + PG S +EV
Sbjct: 443 LGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVK 502
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
+V++FV+ DR HP +IY M+ +M LK Y+P VL D+ E EK + L+ HS+
Sbjct: 503 NRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQEKEQSLEVHSE 562
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLA+AF LI S G+ I+I +NLR+C DCH K++S I R+II+RDR RFH F++G+C
Sbjct: 563 KLALAFGLISTSPGAAIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDRNRFHHFENGSC 622
Query: 600 SCRDYW 605
SCRDYW
Sbjct: 623 SCRDYW 628
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/522 (40%), Positives = 320/522 (61%), Gaps = 1/522 (0%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ E +N ++ G ++ EE L L++ M E G PD F ++ + CA
Sbjct: 137 ARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAG 196
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L+AL G Q+HG+V K GFE +L V +SL +MY KC + + + M ++V +W+ +
Sbjct: 197 LRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTL 256
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA A NG E L + M +RP++ VSV+S+C+ L L G+ H +I+
Sbjct: 257 IAGRAQNGYPEEVLDQYNMMKMAG-FRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG 315
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++L V V +SLI MY +CGCLE L +F + + +S MI+ HG+G EA+ +F+
Sbjct: 316 ASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFN 375
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M +E LE +DV ++ +L ACSH GL +G+ FD M +Y + P ++HY C+VDL+GR
Sbjct: 376 QMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRY 435
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G + EA LI+SMP++ + + W++LLSA K+H E+ ++ +F+++ P YVLLS
Sbjct: 436 GSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLS 495
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N++A +RW DV+ +R M + L + PG S +EV ++++F D+SHP I +
Sbjct: 496 NIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLR 555
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ ++K GY PDI VL D+D ++K L HS+KLAIAFAL++ G+PIR+ +NLR
Sbjct: 556 ELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLR 615
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C+DCH K IS I REIIVRD RFH FK+G CSC DYW
Sbjct: 616 VCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCGDYW 657
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 156/326 (47%), Gaps = 38/326 (11%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSIF 88
++L+ C L ++VH +V K GF +N LV +L+H GS+ +
Sbjct: 189 SVLRGCAGLRALVAGRQVHGYVRKCGFEFN------LVVVSSLAHMYMKCGSLGEGERLI 242
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R + +NTLI G + EE L YN M G PD TF ++ +C++L L
Sbjct: 243 RAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLG 302
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+G QIH V K G + V +SLI+MY +C +E++ +F + + V WS++IAA+
Sbjct: 303 QGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYG 362
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
+G E + LF +M EK + +S+L AC+H G + G I ++
Sbjct: 363 FHGRGVEAIDLFNQMEQEK-LEANDVTFLSLLYACSHCGLKEKG----------IKFFDL 411
Query: 269 IVE-----------TSLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQGK 316
+VE T ++D+ + G +E+ L R M K +T+ ++S +H + +
Sbjct: 412 MVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTE 471
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLS 342
A I E+ R L+P D V +LS
Sbjct: 472 MARRISEEVFR--LDPRDPVPYVLLS 495
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 37/346 (10%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F L ++C +L G Q+H + G D F+ N L+N+Y KC +++ A +F M
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMN----------------------------- 224
+K++ S + +I + +G W K+F EM
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 225 -NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
NE + P+E L SVL C L AL G+ HG + + N++V +SL MY+KCG
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L +G L R M + + ++ +I+G A +G +E L ++ M G PD + +V V+S+
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294
Query: 344 CSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
CS + +G + + +K ++ +V ++ + R G L +L++ + + D
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSV--ISSLISMYSRCGCLEYSLKVF--LECENGD 350
Query: 403 VV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
VV W S+++A H + I N + +D LS +YA
Sbjct: 351 VVCWSSMIAAYGF-HGRGVEAIDLFNQMEQEKLEANDVTFLSLLYA 395
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 43/216 (19%)
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
E S+ +L +C +L LGK H +I + + + + L+++Y KCG L+ + LF
Sbjct: 51 EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110
Query: 292 RMMADK----CQL---------------------------TYSVMISGLAMHGQGKEALS 320
+M K C + T++ M++GL +E L
Sbjct: 111 GVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLG 170
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSH-----AGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+FS M G PD+ VL C+ AG G + + +V ++ H
Sbjct: 171 LFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAH--- 227
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ + G LGE LI++MP QN V W +L++
Sbjct: 228 ---MYMKCGSLGEGERLIRAMP-SQNVVAWNTLIAG 259
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/559 (38%), Positives = 328/559 (58%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+KVH +++ G P ++LV A G + A IF ++ E + LI G+
Sbjct: 168 QKVHMEIVEAGLELEPRVGTSLVGMYA--KCGDISKARVIFDRLPEKNVVTWTLLIAGYA 225
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ + + AL L M + V P+ TF ++ + C AL+ G ++H ++ + G+ +L+
Sbjct: 226 QQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELW 285
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLI MY KC +E A +F + + V +W+A++ +A G E + LF M +
Sbjct: 286 VVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG 345
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P++ SVL++C+ L GK H L+ L+V ++++L+ MY KCG ++
Sbjct: 346 I-KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDA 404
Query: 288 LCLFRMMADKCQLTYSVMISGL-AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M+++ + ++ +I+G A HG+ +EAL F +M ++G++PD V + VLSAC+H
Sbjct: 405 SLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTH 464
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
GLV EG F M L+Y I P V+HY C VDL+GRAG L EA +I SMP VW
Sbjct: 465 VGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWG 524
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LLSA +VH ++E GE AA+N+ +++ YV LS++YA A R+ D K+R M +
Sbjct: 525 ALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRD 584
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + PG S +EV KV+ F +D+SHP + IY + ++ Q+K GY PD VL DVD
Sbjct: 585 VVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVD 644
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E++K L HS++LAI + L+ G PIRI +NLR+C DCHT TK IS + REII R
Sbjct: 645 EEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIAR 704
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D +RFH F DG CSC D+W
Sbjct: 705 DAQRFHHFADGVCSCGDFW 723
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 191/387 (49%), Gaps = 11/387 (2%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
QEC + ++LE+ ++VHA +LK G N + + L++ A GS+ A +F I
Sbjct: 55 QECARL----RSLEQGREVHAAILKSGIQPNRYLENTLLSMYA--KCGSLTDARRVFDSI 108
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + +I FV + EA Y M G +PD TF +L A + L+ G
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H + + G E + V SL+ MY KC + A IF ++ +K+V +W+ +IA +A G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+L M + P + S+L CT AL+ GK H +I++ + V
Sbjct: 229 QVDVALELLETMQQAEV-APNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVV 287
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
SLI MY KCG LE+ LF + + +T++ M++G A G EA+++F M ++G++
Sbjct: 288 NSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIK 347
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD + + VL++CS + EG ++ Y + +Q +V + + G + +A
Sbjct: 348 PDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDAS 405
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHN 417
+ M ++N V W ++++ H
Sbjct: 406 LVFNQMS-ERNVVAWTAIITGCCAQHG 431
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 157/311 (50%), Gaps = 17/311 (5%)
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
K +EAL + N M +G + F L + CA+L++L++G ++H + K G + + +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
++N+L++MY KC + A +F + +++ SW+A+I A + E K + M
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
C +P++ VS+L+A T+ L LG+ H ++ L V TSL+ MY KCG + K
Sbjct: 144 C-KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKA 202
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F + +K +T++++I+G A GQ AL + M + + P+ + + +L C+
Sbjct: 203 RVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTP 262
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYG-------CVVDLMGRAGMLGEALELIQSMPIQQ 400
+ G K+ I+ + YG ++ + + G L EA +L +P +
Sbjct: 263 AALEHG------KKVHRYIIQS--GYGRELWVVNSLITMYCKCGGLEEARKLFSDLP-HR 313
Query: 401 NDVVWRSLLSA 411
+ V W ++++
Sbjct: 314 DVVTWTAMVTG 324
>gi|15228954|ref|NP_191214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180975|sp|Q9LXY5.1|PP284_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g56550
gi|7594533|emb|CAB88058.1| putative protein [Arabidopsis thaliana]
gi|91806586|gb|ABE66020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646013|gb|AEE79534.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/581 (37%), Positives = 339/581 (58%), Gaps = 8/581 (1%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K + + +L+ C ++++ +K+H+HV+ G +P ++L+ CA+S GS+ +A +F
Sbjct: 4 KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 90 QID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQAL 147
D +P D+N LIRGF ++ YN M V PD FTF K+C +++++
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ ++IHG V + GF D V SL+ Y VE AS +F +M + + SW+ +I
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH--GSLIRNISA 265
+ GL ++ L ++ M NE + LV++LS+C H+ AL++G H IR S
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
V V +LIDMY KCG LE + +F M + LT++ MI G +HG G EA+S F +M
Sbjct: 243 --VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
+ G+ P+ + ++G+L CSH GLV EG+ F+ M ++ + P V+HYGC+VDL GRAG
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L +LE+I + ++ V+WR+LL + K+H NLE+GE+A K L Q+ + + DYVL++++
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
Y+ A A +R + S L PG+S +E+ +V+KFV D+ HP IY + ++
Sbjct: 421 YSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEV 480
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERL-KGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ GY P+ S D HS+KLAIA+ L+ + G+ +RI +NLR+
Sbjct: 481 INRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRV 540
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH++TK +S + REIIVRDR RFH F DG CSC DYW
Sbjct: 541 CRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 337/582 (57%), Gaps = 8/582 (1%)
Query: 29 LKEQECLT-ILKTCKNLEEF----KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
L +Q +T +L+ C +LEE ++VH LK G + F ++ L+ S G M+
Sbjct: 395 LPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDV--YSKGGKMEE 452
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F D +N ++ GF + EAL L++ M ERG + D TF KA
Sbjct: 453 AELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGC 512
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L++G QIH V K+ F DLFV + +++MY KC +++ A +F Q+ +W+ +
Sbjct: 513 LVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTV 572
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I+ NG + L + +M +P+E +++ AC+ L AL+ GK H ++++
Sbjct: 573 ISGCVENGEEEQALFTYHQMRLAGV-QPDEYTFATLVKACSLLTALEQGKQIHANIMKLN 631
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
A + V TSL+DMY KCG +E LFR M + ++ MI GLA HG +EAL+ F+
Sbjct: 632 CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFN 691
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EM G+ PD V ++GVLSACSH+GL ++ FD M+ Y + P ++HY C+VD + RA
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRA 751
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G + EA +++ SMP + + ++R+LL+A +V + E GE A+ LF ++ + YVLLS
Sbjct: 752 GHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLS 811
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A +W + R M + + PGFS +++ KV+ FV+ DRSH D IY +
Sbjct: 812 NIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVE 871
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ ++K EGY PD L D++E++K L HS+KLAIA+ L+ + +R+ +NLR
Sbjct: 872 YVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLR 931
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH K IS +++REI++RD RFH F+ G CSC DYW
Sbjct: 932 VCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 201/390 (51%), Gaps = 14/390 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQI 91
L+++ + +LE K++H V+++G W+ F + VA A++ + GS++YA +F Q+
Sbjct: 304 LSVVASLNHLELGKQIHGAVVRFG--WDQFVS---VANSAINMYVKAGSVNYARRMFGQM 358
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEG 150
E +NT+I G + E +L L+ ++ G+ PD FT ++ +AC+ L ++ G
Sbjct: 359 KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVG 418
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H K G D FV +LI++Y K K+E A +F D +ASW+A++ +
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVS 478
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ E L+LF M +E+ + ++ + A L L GK H +I+ ++ V
Sbjct: 479 DNYREALRLFSLM-HERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV 537
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ ++DMY+KCG ++ +F + + ++ +ISG +G+ ++AL + +M G+
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGV 597
Query: 331 EPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+PD+ + ++ ACS + +G + + MKL P V +VD+ + G + +A
Sbjct: 598 QPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVDMYAKCGNIEDA 655
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
L + M ++ +W +++ H N E
Sbjct: 656 YGLFRRMN-TRSVALWNAMIVGLAQHGNAE 684
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 162/339 (47%), Gaps = 22/339 (6%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
YA +F D+ +N + +++ E EA+ + +M + V D+ T+ + A
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVA 308
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L L+ G QIHG V + G++ + V NS INMY K V +A +F QM + + SW+
Sbjct: 309 SLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL-GALDLGKCTHGSLIR 261
+I+ A +GL L+LF ++ P++ + SVL AC+ L + +G+ H ++
Sbjct: 369 VISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLEESYCVGRQVHTCALK 427
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
L+ V T+LID+Y K G +E+ LF +++ M+ G + +EAL +
Sbjct: 428 AGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRL 487
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ----HYGC-- 375
FS M G + D + + +A AG C R++ +I V HY
Sbjct: 488 FSLMHERGEKADQITFA---NAAKAAG-------CLVRLQQGKQIHAVVIKMRFHYDLFV 537
Query: 376 ---VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G + A ++ +P +DV W +++S
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISG 575
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAH 207
G + H + G D +V N+LI MY KC + A +F Q + + +++AI+AA+
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 208 ASNGLWSECLKLFGEMNNEKCWR-----PEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
A G + K + + R L + C G+ + G ++
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+V V +L+++Y K + + LF M + + ++VM+ G G E L +F
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 323 SEMLREGLEPD 333
S R GL PD
Sbjct: 212 SAFHRSGLRPD 222
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 133/330 (40%), Gaps = 19/330 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA--FDFNTLIRG 105
K+ HA ++ G + + +NL+ A GS+ A +F + +N ++
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYA--KCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 106 FVKEVEFE------EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
+ E EA ++ + + + T LFK C + + G+ K
Sbjct: 91 YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+G + D+FV +L+N+Y K +++ A +F +M + V W+ ++ A+ G E L L
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGL 210
Query: 220 FGEMNNEKCWRPE----ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
F + RP+ +IL+ V L+ + L +V V +
Sbjct: 211 FSAFHRSGL-RPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTL 269
Query: 276 DMYVKCGCLEKGLCLFRMMADK---C-QLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
Y++ G + + FR M C LTY V++S +A + I ++R G +
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWD 329
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
V ++ AG VN F +MK
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMK 359
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/607 (37%), Positives = 344/607 (56%), Gaps = 43/607 (7%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L++CK++ + K+ HAH++ G +P A+ L+ S +GS+ YA +F QI +P F
Sbjct: 22 LESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVF 81
Query: 98 DFNTLIRGF-VKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+NT+I+ V ++ ++ M G P+ +TF +FKAC + EG QI
Sbjct: 82 IYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRV 141
Query: 156 HVFKVGFECDLFVQNSLINMYGK-------------------------------CEKVEF 184
H K+G E +LFV N++I MY ++
Sbjct: 142 HAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGR 201
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F +M ++ V SW+ IIA + G + E L LF EM + P E L S L+AC
Sbjct: 202 AKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEML-QTGPPPNEFTLASALAACA 260
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
+L ALD G+ H + ++ +N + SL+DMY KCG ++ +F D+ L V
Sbjct: 261 NLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFH---DEYGLKLKV 317
Query: 305 -----MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
MI G AMHG+ KEA+ +F +M E + P+ V +V +L+ACSH LV EG F
Sbjct: 318 WPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKS 377
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M Y I P ++HYGC+VDL+GR+G+L EA E + +MP+ + +W +LL A ++H ++E
Sbjct: 378 MASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIE 437
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
G+ K + +++S H +VLL+N+Y+ + +W + +R ++ G ++PG S +E+
Sbjct: 438 RGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELN 497
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHS 538
++F+ DRSHP +Y + +M +LK GY P+ +VL D+D++E +E L HS
Sbjct: 498 GVFHQFLVGDRSHPQTKQLYLFLDEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHS 557
Query: 539 QKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+KLAIAF LI+ G+ IRI +NLR+C DCH TK IS +Y+REIIVRDR R+H FKDG
Sbjct: 558 EKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGF 617
Query: 599 CSCRDYW 605
CSC+DYW
Sbjct: 618 CSCKDYW 624
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/619 (36%), Positives = 352/619 (56%), Gaps = 47/619 (7%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TCALSHWGSMDYACS 86
R+ E E + IL+ C +L + K+VHA + + + + L+ AL H Y
Sbjct: 5 RVLEWEVVRILERCSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRL 64
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F Q+ P F + LIR + +AL Y+ M +R V P +FTF ALF ACA ++
Sbjct: 65 LFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRH 124
Query: 147 LKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
G Q+H +G F DL+V N++I+MY KC + A +F +M ++ V SW+ +I
Sbjct: 125 SALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIV 184
Query: 206 AH-------------------------------ASNGLWSECLKLFGEMNNEKCWRPEES 234
A+ A N + + L++F + +E +E
Sbjct: 185 AYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGV-EIDEV 243
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNIS-------ALNVIVETSLIDMYVKCGCLEKG 287
LV V+SAC LGA + + IR+I+ NV+V ++LIDMY KCG +E+
Sbjct: 244 TLVGVISACAQLGA-----SKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEA 298
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F+ M ++ +YS MI G A+HG+ + A+ +F +ML G++P+ V +VGVL+ACSHA
Sbjct: 299 YDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHA 358
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV++G F M+ Y + PT + Y C+ DL+ RAG L +AL+L+++MP++ + VW +
Sbjct: 359 GLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGA 418
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL AS VH N ++ EIA+K LF++ + +Y+LLSN YA A RW DV+K+R + K L
Sbjct: 419 LLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNL 478
Query: 468 NQSPGFSLVEVARK-VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
++PG+S VE ++KFV+ D SHP + I + ++ + +LK GY P++S + ++
Sbjct: 479 KKNPGWSWVEAKNGMIHKFVAGDVSHPKINEIKKELNDLLERLKGIGYQPNLSSLPYGIN 538
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
+ EKR L HS+KLA+AF L+ GS I+I +NLR+C DCH S + R+I+VR
Sbjct: 539 DREKRLLLMAHSEKLALAFGLLSTDVGSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVR 598
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F +G CSC ++W
Sbjct: 599 DNTRFHHFLNGACSCSNFW 617
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/586 (38%), Positives = 335/586 (57%), Gaps = 15/586 (2%)
Query: 27 LRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGF----FWNPFCASNLVATCALSHWG 79
++ E L +L C + L K++H + + F N F A + G
Sbjct: 347 MKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELSNAF-------ILAYAKCG 399
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+++ A +F I + +N LI G + + +AL L +M G +PD FT +L
Sbjct: 400 ALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLL 459
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
ACA L++L+ G +IHG+V + G E D FV SL++ Y C K A +F +M K++ S
Sbjct: 460 ACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVS 519
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+A+I+ ++ NGL E L LF + +E + E +VSV AC+ L AL LGK HG +
Sbjct: 520 WNAMISGYSQNGLPYESLALFRKSLSEGI-QSHEIAIVSVFGACSQLSALRLGKEAHGYV 578
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ + + V S+IDMY K GC+++ +F + DK +++ +I +HG GKEA+
Sbjct: 579 LKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAI 638
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
++ M + G PD Y+G+L AC HAGLV EGL F M+ I P ++HY C++D+
Sbjct: 639 ELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDM 698
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+ RAG L +AL L+ MP + ++ +W SLL + + LEIGE AK L ++ +Y
Sbjct: 699 LARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENY 758
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSN+YA +W V ++R M GL + G S +EV +VY FV D P I
Sbjct: 759 VLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIR 818
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ ++E ++ GY P+ S VL +V E+EK + L+GHS+KLAI+F L+ ++G+ +RI
Sbjct: 819 VIWRRLEERISEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIY 878
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH KLIS EREI+VRD KRFH F+DG CSC DYW
Sbjct: 879 KNLRICADCHNAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDYW 924
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 182/351 (51%), Gaps = 11/351 (3%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKW 57
+ T L +L+L Q ++L+ KE L +L+ C K++E +++H V
Sbjct: 15 LCETDNLTTALILIQSH-SQNAAFISLQAKEAIGL-LLQACGNQKDIETGRRLHKFVSDS 72
Query: 58 GFFWNPFC-ASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEAL 116
+ N + + L+ A+ GS + +F ++ +N L+ G+ + + + +
Sbjct: 73 THYRNDYVLNTRLIKMYAMC--GSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVV 130
Query: 117 FLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM 175
++ ++ + +PDNFTFP++ KAC + ++ G IHG V K+G D+FV N+L+ M
Sbjct: 131 KVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGM 190
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
YGKC V+ A +F M + ++ SW+++I A + NG + L EM E+ P+
Sbjct: 191 YGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVT 250
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+V++L C G +D+G HG ++ + V+V +++ MY KCG L + F
Sbjct: 251 VVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNN 310
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEPDDVVYVGVLSAC 344
+K ++++ MIS ++ G EA ++ EM +G ++ ++V + VL AC
Sbjct: 311 NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 346/610 (56%), Gaps = 42/610 (6%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L +C E +++H+H+ + G + A+ L+ S+ A IF ++
Sbjct: 262 VSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITM--YCKCNSVQEAREIFDRM 319
Query: 92 DEPGAFDFNTLIRGFVK-----EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+ ++ +I G+ + + +E L M GV P+ TF ++ +AC A
Sbjct: 320 SKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGA 379
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV------------------------ 182
L++G QIH + KVGFE D +Q ++ NMY KC +
Sbjct: 380 LEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSM 439
Query: 183 -----EFASA--IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
+ +SA +F +M ++V SW+ +IA +A NG + +L M E ++P+
Sbjct: 440 YIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEG-FQPDRVT 498
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
++++L AC L L+ GK H ++ + +V TSLI MY KCG + + +F M+
Sbjct: 499 VITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMS 558
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
++ + ++ M++G HG G EA+ +F ML+E + P+++ V+SACS AGLV EG
Sbjct: 559 NRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGRE 618
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M+ ++++ P QHYGC+VDL+GRAG L EA E IQSMP + + VW +LL A K H
Sbjct: 619 IFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSH 678
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
+N+++ E AA ++ ++ + S Y+ LSN+YA+A RW D K+R M +GL + G S
Sbjct: 679 NNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESS 738
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+E+ +++ FV++D +HP D I+ + + ++K GY+PD+ VL DVD+ +K + L
Sbjct: 739 IEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALC 798
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIA+ L+ G+PIRI +NLR+C DCHT TK IS I +REI+ RD RFH F
Sbjct: 799 HHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFN 858
Query: 596 DGTCSCRDYW 605
+GTCSC D+W
Sbjct: 859 NGTCSCGDFW 868
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 197/421 (46%), Gaps = 46/421 (10%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L+ILK C N LE+ +K+H V G + A+ L+ S G + AC +F ++
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITM--YSKCGEISVACEVFHKM 218
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + +I+ + + EA LY +M + G+ P+ TF +L +C +AL G
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH H+ + G E D+ V N+LI MY KC V+ A IF +M ++ V SWSA+IA +A +G
Sbjct: 279 RIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG 338
Query: 212 L-----WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR----- 261
E +L M E + P + +S+L ACT GAL+ G+ H L +
Sbjct: 339 YKDKESIDEVFQLLERMRREGVF-PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 262 --------------------------NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
++ NV+ TS + MY+KCG L +F M
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP 457
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH-AGLVNEGL 354
+ +++++MI+G A +G + + S M EG +PD V + +L AC AGL L
Sbjct: 458 TRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKL 517
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
+ + +KL V ++ + + G + EA + M ++ V W ++L+
Sbjct: 518 VHAEAVKLGLESDTVVA--TSLIGMYSKCGQVAEARTVFDKMS-NRDTVAWNAMLAGYGQ 574
Query: 415 H 415
H
Sbjct: 575 H 575
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 207/426 (48%), Gaps = 26/426 (6%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
+ E+ K VH + + G + + ++L+ S + + A +FR++ +++
Sbjct: 70 RRFEDGKMVHKQLDELGVEIDIYLGNSLINF--YSKFEDVASAEQVFRRMTLRDVVTWSS 127
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I + +A + M + +EP+ TF ++ KAC L++G +IH V +G
Sbjct: 128 MIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMG 187
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
E D+ V +LI MY KC ++ A +F +M +++V SW+AII A+A + +E +L+
Sbjct: 188 METDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYE 247
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M + P VS+L++C AL+ G+ H + ++IV +LI MY KC
Sbjct: 248 QM-LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKC 306
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHG-QGKEALS----IFSEMLREGLEPDDVV 336
+++ +F M+ + +++S MI+G A G + KE++ + M REG+ P+ V
Sbjct: 307 NSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVT 366
Query: 337 YVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++ +L AC+ G + +G + K+ + + ++Q + ++ + G + EA ++
Sbjct: 367 FMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSK 424
Query: 396 MPIQQNDVVWRSLL----------SASKVHHNLEIGEIAAKNLFQINSHHPSDYV----L 441
M +N V W S L SA KV + + + NL D V L
Sbjct: 425 MA-NKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFEL 483
Query: 442 LSNMYA 447
LS+M A
Sbjct: 484 LSSMKA 489
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 222/500 (44%), Gaps = 66/500 (13%)
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D S +++D P + + R K EA+ L + +RG+ ++ T+ + + C
Sbjct: 8 DGFASTGKELDGPTSVSGGEVWR-LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHC 66
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
AK + ++G +H + ++G E D+++ NSLIN Y K E V A +F++M + V +WS
Sbjct: 67 AKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWS 126
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++IAA+A N ++ F M + P +S+L AC + L+ G+ H +
Sbjct: 127 SMIAAYAGNNHPAKAFDTFERMTDANI-EPNRITFLSILKACNNYSILEKGRKIHTIVKA 185
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+V V T+LI MY KCG + +F M ++ ++++ +I A H + EA +
Sbjct: 186 MGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFEL 245
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEG---------------LLCFDRMKLEYRI 366
+ +ML+ G+ P+ V +V +L++C+ +N G ++ + + Y
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK 305
Query: 367 VPTVQHYGCVVDLMGRAGMLG--------------------EALELIQSM---PIQQNDV 403
+VQ + D M + ++ E +L++ M + N V
Sbjct: 306 CNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSH-HPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+ S+L A H LE G L ++ S + NMYA+ Y+ ++ ++M
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 463 ASKGLNQSPGFSLVEV-------ARKVYKFVSQDRSHPAWD-------------NIYEMI 502
A+K + F + + A KV+ + R+ +W+ ++E++
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPT-RNVVSWNLMIAGYAQNGDIVKVFELL 484
Query: 503 HQMEWQLKFEGYSPDISQVL 522
M K EG+ PD V+
Sbjct: 485 SSM----KAEGFQPDRVTVI 500
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/594 (37%), Positives = 347/594 (58%), Gaps = 42/594 (7%)
Query: 16 PEEPPKGPELNLRLKEQECLTI--LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC 73
P+ P + N++ + E L I L+ + E ++VHA ++K + + + C
Sbjct: 44 PQSPNRNQIHNVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVC 103
Query: 74 ALSHWGSMDYACSIFRQIDE--PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
A + S YA IF+ +++ P F +N+ ++ + +A+ L+ + + V PD
Sbjct: 104 AFT--PSFHYAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDT 161
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
FT ++ +AC L L G +HG V KVGF
Sbjct: 162 FTCSSVLRACLNLLDLSNGRILHGVVEKVGFR---------------------------- 193
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
SW+++IA + G E + LF +M E + E +V+VL+AC LGALDL
Sbjct: 194 -------SWTSMIAGYVQCGKAKEAIHLFAKME-EAGVKCNEVTVVAVLAACADLGALDL 245
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G H R+ NV + +LIDMYVKCGCLE+ +F M ++ +++S MI GLAM
Sbjct: 246 GMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAM 305
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
HG+ +EAL +FS+M + G+EP+ V ++G+L ACSH GL++EG F M +Y I+P ++
Sbjct: 306 HGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIE 365
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
HYGC+VDL+ RAG+L EA E I +MP++ N VVW +LL A +VH N+E+ E A K+L ++
Sbjct: 366 HYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLEL 425
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
+ + YV+LSN+YA A RW D A++R M + + ++PG+S + V V++FV+ + S
Sbjct: 426 DPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEES 485
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
HP + I++ ++ +++ +GY P+ S VL D++E EK + + HS+KLA+ F L++
Sbjct: 486 HPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTP 545
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+PIRI +NLR+C DCH+ KLIS I REI+VRDR RFH F D +CSCRDYW
Sbjct: 546 AETPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/527 (39%), Positives = 314/527 (59%), Gaps = 21/527 (3%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + + +I G ++ +E +N M E + P+ T +L
Sbjct: 240 GCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLI 299
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
C + L G H ++ + GF L + +LI+MYGKC +V +A A+F + +K V
Sbjct: 300 TECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVK 359
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
WS +I+A+A + LF EM N +P +VS+LS C GALDLGK TH
Sbjct: 360 IWSVLISAYAHVSCMDQVFNLFVEMLNNDV-KPNNVTMVSLLSLCAEAGALDLGKWTHAY 418
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ R+ ++VI+ET+LI+MY KCG + LF + ++ M++G +MHG GKEA
Sbjct: 419 INRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEA 478
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +FSEM G+EP+D+ +V + ACSH+GL+ +HYGC+VD
Sbjct: 479 LELFSEMESHGVEPNDITFVSIFHACSHSGLM--------------------EHYGCLVD 518
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +I++MP++ N ++W +LL+A K+H NL +GE+AA+ + +++ +
Sbjct: 519 LLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGY 578
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
VL SN+YA A+RW DV +R M+ G+ + PG S +EV+ V+ F S D++ +
Sbjct: 579 SVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKV 638
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YEM+ +M +L+ GY+P+ + VL ++DE+EK L HS+KLA AF LI + G+PIRI
Sbjct: 639 YEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRI 698
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH TKL+S IY R IIVRDR RFH F +G CSC YW
Sbjct: 699 VKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 176/373 (47%), Gaps = 30/373 (8%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
NL++ ++HAH +K F NP F Q ++N L
Sbjct: 21 NLQQTHQLHAHFIKTQFH-NPH---------------------PFFSQSHFTPEANYNLL 58
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEP-DNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
I + + + Y M DNF P+L KACA+ + G ++HG K G
Sbjct: 59 ISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNG 118
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F D+FV N+L+NMY KC + A +F QM ++ V SW+ ++ + + + E L+L
Sbjct: 119 FASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVR 178
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS--ALNVIVETSLIDMYV 279
EM + L+S+++ +L + G+ HG ++RN+ + V + T+LIDMY
Sbjct: 179 EMQFVGV-KLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
K GCL LF ++ + ++++VMI+G + E F+ ML E L P+++ +
Sbjct: 238 KGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLS 297
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+++ C G ++ G F L ++ ++D+ G+ G +G A L ++
Sbjct: 298 LITECGFVGTLDLGKW-FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNG--VK 354
Query: 400 QNDV-VWRSLLSA 411
+ DV +W L+SA
Sbjct: 355 KKDVKIWSVLISA 367
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 336/573 (58%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK C LE F K VH K + F L+ S G +D A +F ++
Sbjct: 251 SVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKS--GDVDDALQVFEEMP 308
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ ++ +I + + + EEA+ ++ M V P+ FT +L +ACA L L+ G Q
Sbjct: 309 KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQ 368
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH HV KVG + ++FV N+L++MY KC ++E + +F + + SW+ +I + G
Sbjct: 369 IHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGN 428
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L LF +M + + E SVL AC + AL+ G H ++ I N +V
Sbjct: 429 GEKALILFKDMLECQV-QGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN 487
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LIDMY KCG ++ +F M+ + Q++++ MISG ++HG EAL F ML +P
Sbjct: 488 ALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKP 547
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D V +VG+LSACS+AGL++ G F M EY I P +HY C+V L+GR+G L +A +L
Sbjct: 548 DKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKL 607
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ +P + + +VWR+LLSA +H+++E+G I+A+ + +I + +VLLSN+YA A+RW
Sbjct: 608 VHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRW 667
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VA IRT M KG+ + PG S +E +V+ F D SHP I M+ + + + E
Sbjct: 668 GNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNE 727
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD S VL DV++ +K +RL HS++LA+A+ LI SP+RI +NLR+C DCH
Sbjct: 728 GYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAI 787
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I +R+II+RD RFH F +G CSC DYW
Sbjct: 788 KLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 183/392 (46%), Gaps = 23/392 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +H ++K G + F A+N++ + + S+ A +F ++ + F TLI+G+
Sbjct: 64 KYLHCEIIKKGNCLDLF-ANNILLNFYVK-YDSLPDAAKLFDEMPDRNTVSFVTLIQGYS 121
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ + F EA+ L++ + G E + F F + K + K G +H V+K+GF+ D F
Sbjct: 122 QCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAF 181
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +LI+ Y C E A +F ++ K + SW+ ++A + N + E LKLF M
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVG 241
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++P SVL AC L ++GK HG + + V LID+Y+K G ++
Sbjct: 242 -FKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDA 300
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
L +F M + +S MI+ A Q +EA+ +F M R + P+ +L AC A
Sbjct: 301 LQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQAC--A 358
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYG---------CVVDLMGRAGMLGEALELIQSMPI 398
LV+ ++L +I V G ++D+ + G + +L+L P
Sbjct: 359 SLVD--------LQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP- 409
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
DV W +++ N E I K++ +
Sbjct: 410 NCTDVSWNTVIVGYVQAGNGEKALILFKDMLE 441
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 132/299 (44%), Gaps = 12/299 (4%)
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY 176
FL E + + + +L ++C + G +H + K G DLF N L+N Y
Sbjct: 30 FLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFY 89
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
K + + A+ +F +M ++ S+ +I ++ +SE + LF + E +
Sbjct: 90 VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEG-HELNPFVF 148
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+VL LG H + + + V T+LID Y CG E +F +
Sbjct: 149 STVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY 208
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL- 355
K ++++ M++ + +E+L +FS M G +P++ + VL AC + N G
Sbjct: 209 KDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAV 268
Query: 356 ---CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
F LE V ++DL ++G + +AL++ + MP ++DV+ S + A
Sbjct: 269 HGCAFKTSYLEELFVGVE-----LIDLYIKSGDVDDALQVFEEMP--KDDVIPWSFMIA 320
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/545 (41%), Positives = 325/545 (59%), Gaps = 32/545 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
AC +F ++ E ++ LI F + +EEA+ + M + GV D + ACA
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK---------------------- 181
L + G IH K+G E + +QN+LI MY KC
Sbjct: 389 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 448
Query: 182 ---------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
V+ A AIF M +K V SWS++I+ +A N L+ E L LF EM ++P+
Sbjct: 449 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG-FKPD 507
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
E+ LVSV+SAC L AL+ GK H + RN +NVI+ T+LIDMY+KCGC+E L +F
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M +K T++ +I GLAM+G + +L +FS M + + P+++ ++GVL AC H GLV+E
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 627
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G F M +++I P V+HYGC+VDL+GRAG L EA EL+ MP+ + W +LL A
Sbjct: 628 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 687
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
K H + E+G + L ++ H +VLLSN+YA +W DV +IR M + + PG
Sbjct: 688 KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 747
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S++E +++F++ D++HP D I +M+ +M +LK EGY+PDI++VL DVDE+EK
Sbjct: 748 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES 807
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L HS+KLAIAF LI++S +PIRI +NLR+CNDCHT KLIS + R+I+VRDR RFH
Sbjct: 808 TLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFH 867
Query: 593 RFKDG 597
F+ G
Sbjct: 868 HFEQG 872
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 163/399 (40%), Gaps = 96/399 (24%)
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
R +++ A LY M + DN+T+P L +AC+ ++ E Q+H HV K+GF+
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD 245
Query: 164 CDLFVQNSLINMYGKCE-------------------------------KVEFASAIFKQM 192
D++V+N+LIN + C VE A I+ QM
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 193 DQKSV-------------------------------ASWSAIIAAHASNGLWSECLKLFG 221
++S+ +WSA+IA N ++ E ++ F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG------------------------ 257
M+ +E + VS LSAC +L +++GK H
Sbjct: 366 GMHKIGV-MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKC 424
Query: 258 -------SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
L L++I S+I Y+KC ++ +F M +K +++S MISG A
Sbjct: 425 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 484
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
+ E L++F EM G +PD+ V V+SAC+ + +G +K + +
Sbjct: 485 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 544
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++D+ + G + ALE+ M I++ W +L+
Sbjct: 545 LG-TTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALI 581
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 7/256 (2%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +IF + E ++++I G+ + F+E L L+ EM G +PD T ++ A
Sbjct: 458 VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISA 517
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA+L AL++G +H ++ + G ++ + +LI+MY KC VE A +F M +K +++W
Sbjct: 518 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 577
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSL 259
+A+I A NGL L +F M +KC P E + VL AC H+G +D G+ S+
Sbjct: 578 NALILGLAMNGLVESSLDMFSNM--KKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM 635
Query: 260 IRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKE 317
I + NV ++D+ + G L++ L RM T+ ++ HG +
Sbjct: 636 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 695
Query: 318 ALSIFSEMLREGLEPD 333
+ +++ L+PD
Sbjct: 696 GRRVGRKLIE--LQPD 709
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 31 EQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
E ++++ C L E+ K VHA++ + G N + L+ G ++ A +
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM--YMKCGCVETALEV 565
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + E G +N LI G E +L +++ M + V P+ TF + AC + +
Sbjct: 566 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 625
Query: 148 KEGMQ-----IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWS 201
EG IH H + ++ ++++ G+ K++ A + +M VA+W
Sbjct: 626 DEGQHHFYSMIHDH----KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWG 681
Query: 202 AIIAAHASNG 211
A++ A +G
Sbjct: 682 ALLGACKKHG 691
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/572 (38%), Positives = 340/572 (59%), Gaps = 7/572 (1%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L E ++VH + + GF + F + LVA A G + A ++F ++ +
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYA--KCGEIVRANAVFGRLVD 236
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+ + + EAL +++EM + V PD ++ +A ++ L+ G I
Sbjct: 237 RTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSI 296
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG V K+G EC+ + SL ++Y KC V A F Q++ S+ W+A+I+ + NG
Sbjct: 297 HGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYA 356
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++LF M + K RP+ + S ++AC +G+L+L + + + +VIV TS
Sbjct: 357 EEAIELFRLMKS-KNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTS 415
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LID Y KCG ++ +F + DK + +S M+ G +HGQG+E++ +F M + G+ P+
Sbjct: 416 LIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPN 475
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV +VG+L+AC ++GLV EG F RM+ +Y I P QHY CVVDL+GRAG L A +
Sbjct: 476 DVTFVGLLTACKNSGLVEEGWDLFHRMR-DYGIEPRHQHYACVVDLLGRAGHLDRAYNFV 534
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+MPI+ VW +LLSA K+H ++ +GE AA+ LF ++ ++ YV LSN+YA + W
Sbjct: 535 MNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWD 594
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
VAK+R M KGL + G+S++E+ K+ F + D++HP I+E + +E +LK G
Sbjct: 595 CVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAG 654
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P VL D++ +E E L HS++LAIA+ LI G+ +RI +NLR C++CH K
Sbjct: 655 FVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIK 714
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS + REI+VRD RFH FKDG CSC DYW
Sbjct: 715 LISKLVSREIVVRDACRFHHFKDGACSCGDYW 746
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 13/373 (3%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
+++A +L G + F + LV S+ G + A +F + +P F +N ++R +
Sbjct: 91 LNQIYAKLLVTGLQYGGFLIAKLVNKA--SNIGEVSCARKLFDKFPDPDVFLWNAIVRCY 148
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ F A+ +Y M V PD F+FP + KAC+ L AL+ G ++HG +F+ GFE D+
Sbjct: 149 SRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDV 208
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
FVQN L+ +Y KC ++ A+A+F ++ +++ SW++II+ +A NG E L++F EM
Sbjct: 209 FVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKT 268
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
RP+ LVSVL A T + L+ GK HG +I+ + SL +Y KCG +
Sbjct: 269 NV-RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMV 327
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
F + + + ++ MISG +G +EA+ +F M + + PD + ++AC+
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQ 387
Query: 347 AGLVNEGLLCFDRMKL-EYR---IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
G + + + + E+R IV T ++D + G + A + +P ++
Sbjct: 388 IGSLELARWMDEYISMSEFRNDVIVNT-----SLIDTYAKCGSVDMARFVFDRIP-DKDV 441
Query: 403 VVWRSLLSASKVH 415
VVW +++ +H
Sbjct: 442 VVWSAMMVGYGLH 454
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 338/572 (59%), Gaps = 6/572 (1%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL+TC +E +++H+ +K GF + + + L+ S +G +D A I +++
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM--YSKYGCLDKARKILEMLEK 409
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+V+ EEAL + EM + GV PDN + ACA ++A+++G+QI
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V+ G+ D+ + N+L+N+Y +C + E A ++F++++ K +W+ +I+ + L+
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLY 529
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L +F +M + +S +SA +L + GK HG ++ V +
Sbjct: 530 KQALMVFMKMGQAGA-KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI +Y KCG +E +F M+ + +++++ +I+ + HG+G EAL +F +M +EGL+P+
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV ++GVL+ACSH GLV EGL F M Y + P HY CVVD++GRAG L A +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MPI N ++WR+LLSA KVH N+EIGE+AAK+L ++ H + YVLLSN YA +W
Sbjct: 709 DEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWA 768
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ ++R M +G+ + PG S +EV V+ F DR HP D IY+ + ++ +L G
Sbjct: 769 NRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIG 828
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y + + + ++++K HS+KLA+AF L+ L P+R+ +NLR+C+DCH++ K
Sbjct: 829 YKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMK 888
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S + REI++RD RFH F G+CSC DYW
Sbjct: 889 CTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 239/508 (47%), Gaps = 34/508 (6%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C + F + +HA V K F F + L+A +GS A +F +
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIAL--YLGFGSFKLAERVFCDML 206
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
FNTLI G + E AL +++EM G+ PD T +L ACA + L++G Q
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H ++ K G D + SL+++Y KC +E A IF D+ +V W+ ++ A+
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ ++FG+M P + +L CT G ++LG+ H I+N ++ V
Sbjct: 327 LAKSFEIFGQMQATGI-HPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K GCL+K + M+ + ++++ MI+G H +EAL+ F EM G+ P
Sbjct: 386 VLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D++ SAC+ + +GL R+ + + + +V+L R G EA L
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSL 504
Query: 393 IQSMPIQQNDVVWRSLLSA---SKVHHN-----LEIGEIAAK-NLFQINS-----HHPSD 438
+ + ++++ W L+S S+++ +++G+ AK N+F S + +D
Sbjct: 505 FREIE-HKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLAD 563
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
++ RA + ++ TE+A+ ++ +E A+ ++ +S R+ +W+ I
Sbjct: 564 IKQGKQVHGRAVKTGHTSE--TEVANALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTI 620
Query: 499 YEMIHQ---------MEWQLKFEGYSPD 517
Q + Q+K EG P+
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 199/401 (49%), Gaps = 17/401 (4%)
Query: 24 ELNLRLKEQECLTI---LKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCA 74
E+ L +C+T+ L C +L++ K++H+++LK G ++ +L+ C
Sbjct: 235 EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC- 293
Query: 75 LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
G ++ A IF D +N ++ + + + ++ ++ +M G+ P+ FT+
Sbjct: 294 ----GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTY 349
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
P + + C ++ G QIH K GFE D++V LI+MY K ++ A I + +++
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEK 409
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+ V SW+++IA + + E L F EM + W P+ L S SAC + A+ G
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW-PDNIGLASAASACAGIKAMRQGLQ 468
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H + + A ++ + +L+++Y +CG E+ LFR + K ++T++ +ISG
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRL 528
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
K+AL +F +M + G + + ++ +SA ++ + +G R ++ +
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGR-AVKTGHTSETEVAN 587
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ L G+ G + +A + M + +N+V W +++++ H
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITSCSQH 627
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 159/333 (47%), Gaps = 6/333 (1%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F+++ + ++ G+ + +EA LY++M V P + ++ AC K +
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+G IH V+K F + FV N+LI +Y + A +F M +++ +I+
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
HA G L++F EM RP+ + S+L+AC +G L GK H L++ +
Sbjct: 220 HAQCGHGECALQIFDEMQLSGL-RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSF 278
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ I E SL+D+YVKCG +E +F + + +++M+ ++ IF +M
Sbjct: 279 DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ P+ Y +L C+ G + G + ++ + G ++D+ + G L
Sbjct: 339 ATGIHPNQFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYGCL 397
Query: 387 GEALELIQSMPIQQNDVV-WRSLLSASKVHHNL 418
+A ++++ + ++ DVV W S++ A V H+
Sbjct: 398 DKARKILEML--EKRDVVSWTSMI-AGYVQHDF 427
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 141/303 (46%), Gaps = 30/303 (9%)
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
++IH G D + N LI++Y K V A +FK++ + SW A+++ +A +
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQS 122
Query: 211 GLWSECLKLFGEMNNEKCWR---PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
GL E +L+ +M+ W P +L SVLSACT G+ H + +
Sbjct: 123 GLGKEAFRLYSQMH----WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +LI +Y+ G + +F M ++T++ +ISG A G G+ AL IF EM
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
GL PD V +L+AC+ G + +G L M +Y G ++DL +
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT------EGSLLDLYVK 292
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSA----SKVHHNLEI-GEIAAKNLFQINSHHPS 437
G + A ++ ++ + N V+W +L A S + + EI G++ A + HP+
Sbjct: 293 CGDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI------HPN 345
Query: 438 DYV 440
+
Sbjct: 346 QFT 348
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/598 (36%), Positives = 345/598 (57%), Gaps = 23/598 (3%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL 69
S LT+P E L ++++ C L+E K++ A+ +K + N +
Sbjct: 10 SFSLTKPNT-----ETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKF 64
Query: 70 VATCALSHW-GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
+ C + SM++A +F QI +P FNT+ RG+ + + L +
Sbjct: 65 INFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYAR---LNDPLRMITH------- 114
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
F + +K++AL EG Q+H K+G +++V +LINMY C ++ + +
Sbjct: 115 -----FRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRV 169
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F ++D+ V +++AII + A N +E L LF E+ E +P + ++ VLS+C LG+
Sbjct: 170 FDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQ-EIGLKPTDVTMLVVLSSCALLGS 228
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
LDLG+ H + + V V T+LIDMY KCG L+ + +FR M + +S +I
Sbjct: 229 LDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVA 288
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
A HG G +A+S+ +EM +E ++PD++ ++G+L ACSH GLV EG F M EY IVP
Sbjct: 289 YATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVP 348
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
+++HYGC+VDL+GRAG L EA + I +PI+ ++WR+LLSA H N+E+G+ + +
Sbjct: 349 SIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERI 408
Query: 429 FQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQ 488
F+++ H DYV+ SN+ AR +W DV +R M KG + PG S +EV V++F +
Sbjct: 409 FELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAG 468
Query: 489 DRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL-RDVDEDEKRERLKGHSQKLAIAFAL 547
+ H ++ + ++ +LK GY PD S V D++++EK L+ HS+KLAI F L
Sbjct: 469 EGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMEDEEKEIILRYHSEKLAITFGL 528
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ G+ IR+ +NLR+C DCH K IS+I+ R+II+RD +RFH FKDG CSC DYW
Sbjct: 529 LNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/642 (35%), Positives = 343/642 (53%), Gaps = 69/642 (10%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
+E CL + CK+L K++ A + K P + L+ CA++ S+ YA +F
Sbjct: 4 RELHCLALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFL 63
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACA------ 142
I P F +NTLIRG AL L+ EM + V PD+F+F L KA A
Sbjct: 64 DIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALT 123
Query: 143 ---KLQALKEGMQIHGHVFKVG-------------------------------------- 161
+L L G + H+F VG
Sbjct: 124 NGLQLHCLAVGYGLDSHLF-VGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAAC 182
Query: 162 ------------FEC----DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
F C +L N ++ Y K +++ A +F +M K SWS +I
Sbjct: 183 FRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIV 242
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG +++ F E+ E RP E L VLSAC GA + G+ HG +
Sbjct: 243 GFAHNGNFNDAFAFFREVRREG-MRPNEVSLTGVLSACAQAGAFEFGRILHG-FVEKSGF 300
Query: 266 LNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
L +I V +LID Y KCG L+ +F M + ++++ MI+G+AMHG G+EA+ +F+E
Sbjct: 301 LQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNE 360
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M ++PD + ++ +L ACSHAGLV+ G F RM Y I P ++HYGC+VDL GRAG
Sbjct: 361 MEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAG 420
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L +A + + MPI ND+VWR+LL A +H NL + + L +++ + D+VLLSN
Sbjct: 421 KLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSN 480
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA A +W DVA +R M + L ++PG+S++EV R +Y FV+ ++ + ++ + +
Sbjct: 481 IYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLRE 540
Query: 505 MEWQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ +L+ E GY P++ VL D++ +EK + + HS+KLA+AF + L +G IR+ +NLR
Sbjct: 541 IMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAFGMAKLPRGRAIRVVKNLR 600
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT KLIS +YE EI+VRDR RFH F G+CSCRDYW
Sbjct: 601 ICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 7/190 (3%)
Query: 27 LRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+R E +L C F + +H V K GF + L+ T S G++D
Sbjct: 265 MRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDT--YSKCGNLDM 322
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F + A + +I G EEA+ L+NEM E ++PD+ TF ++ AC+
Sbjct: 323 ARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSH 382
Query: 144 LQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWS 201
+ G + G E + ++++YG+ K++ A QM + W
Sbjct: 383 AGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWR 442
Query: 202 AIIAAHASNG 211
++ A + +G
Sbjct: 443 TLLGACSIHG 452
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 342/577 (59%), Gaps = 13/577 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIF 88
++IL C + L+ +++ H+++ G+ + + V T LS + GS+ A +F
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGY-----GSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+I + +N +I +V+ +++ AL + + + G++P++ TF ++ C +L+
Sbjct: 472 EKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLE 531
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +H + K G E DL V N+L++M+ C + A +F M ++ + SW+ IIA
Sbjct: 532 LGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFV 591
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
+G F +M E +P++ +L+AC AL G+ H + +V
Sbjct: 592 QHGKNQVAFDYF-KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDV 650
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+V T LI MY KCG +E +F + K +++ MI+G A HG+GKEAL +F +M +E
Sbjct: 651 LVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQE 710
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PD + +VG LSAC+HAGL+ EGL F MK E+ I P ++HYGC+VDL GRAG+L E
Sbjct: 711 GVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNE 769
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I M ++ + VW +LL A +VH N+E+ E AA+ +++ + +V+LSN+YA
Sbjct: 770 AVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAA 829
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A W +VAK+R M +G+ + PG S +EV KV+ F S D++HP + I+ + ++ +
Sbjct: 830 AGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHME 889
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
++ GY PD VL DV+++EK + L HS++LAI + L+ +PI I++NLR+C DC
Sbjct: 890 MRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDC 949
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT TK IS I +R+II RD RFH FKDG CSC D+W
Sbjct: 950 HTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 210/402 (52%), Gaps = 18/402 (4%)
Query: 26 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWG-----FFWNPFCASNLVATCALSH 77
++++ Q +L+ C KNL + ++++ H+ K G F WN N+ A C
Sbjct: 105 HIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLI--NMYAKC---- 158
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G+ A IF + E + +N L+ G+V+ +EEA L+ +M + V+PD TF ++
Sbjct: 159 -GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSM 217
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA + + +G +++ + K G++ DLFV +LINM+ KC + A+ +F + + +
Sbjct: 218 LNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDL 277
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
+W+++I A +G + + LF M E +P++ VS+L AC H AL+ GK H
Sbjct: 278 VTWTSMITGLARHGRFKQACNLFQRMEEEGV-QPDKVAFVSLLRACNHPEALEQGKKVHA 336
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ + V T+++ MY KCG +E L +F ++ + ++++ MI+G A HG+ E
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A F++M+ G+EP+ V ++ +L ACS + G D + +E + ++
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI-IEAGYGSDDRVRTALL 455
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ + G L +A + + + +QN V W ++++A H +
Sbjct: 456 SMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYD 496
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 200/394 (50%), Gaps = 28/394 (7%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIF 88
+++L+ C + LE+ KKVHA + + G W+ V T LS + GSM+ A +F
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVG--WD---TEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ + +I GF + +EA +N+M E G+EP+ TF ++ AC+ ALK
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G QI H+ + G+ D V+ +L++MY KC ++ A +F+++ +++V +W+A+I A+
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
+ + L F + E +P S S+L+ C +L+LGK H +++ ++
Sbjct: 491 QHEQYDNALATFQALLKEGI-KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDL 549
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +L+ M+V CG L LF M + ++++ +I+G HG+ + A F M
Sbjct: 550 HVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC-------VVDLMG 381
G++PD + + G+L+AC+ + EG +L I T + C ++ +
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEG------RRLHALI--TEAAFDCDVLVGTGLISMYT 661
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G + +A ++ +P ++N W S+++ H
Sbjct: 662 KCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQH 694
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 177/335 (52%), Gaps = 5/335 (1%)
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
C +F I + N ++ K +F EA+ + + ++ T+ AL + C K
Sbjct: 66 CVVFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKF 123
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ L +G +I+ H+ K G + D+F+ N+LINMY KC A IF M +K V SW+ ++
Sbjct: 124 KNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLL 183
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ +GL+ E KL +M + +P++ VS+L+AC +D G+ + +++
Sbjct: 184 GGYVQHGLYEEAFKLHEQMVQDSV-KPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
++ V T+LI+M++KCG + +F + + +T++ MI+GLA HG+ K+A ++F
Sbjct: 243 DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M EG++PD V +V +L AC+H + +G RMK E + ++ + + G
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCG 361
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ +ALE+ + +N V W ++++ H ++
Sbjct: 362 SMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRID 395
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/577 (36%), Positives = 342/577 (59%), Gaps = 13/577 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIF 88
++IL C + L+ +++ H+++ G+ + + V T LS + GS+ A +F
Sbjct: 417 MSILGACSSPSALKRGQQIQDHIIEAGY-----GSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+I + +N +I +V+ +++ AL + + + G++P++ TF ++ C +L+
Sbjct: 472 EKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLE 531
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +H + K G E DL V N+L++M+ C + A +F M ++ + SW+ IIA
Sbjct: 532 LGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFV 591
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
+G F +M E +P++ +L+AC AL G+ H + +V
Sbjct: 592 QHGKNQVAFDYF-KMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDV 650
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+V T LI MY KCG +E +F + K +++ MI+G A HG+GKEAL +F +M +E
Sbjct: 651 LVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQE 710
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PD + +VG LSAC+HAGL+ EGL F MK E+ I P ++HYGC+VDL GRAG+L E
Sbjct: 711 GVKPDWITFVGALSACAHAGLIEEGLHHFQSMK-EFNIEPRMEHYGCMVDLFGRAGLLNE 769
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I M ++ + VW +LL A +VH N+E+ E AA+ +++ + +V+LSN+YA
Sbjct: 770 AVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAA 829
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A W +VAK+R M +G+ + PG S +EV KV+ F S D++HP + I+ + ++ +
Sbjct: 830 AGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHME 889
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
++ GY PD VL DV+++EK + L HS++LAI + L+ +PI I++NLR+C DC
Sbjct: 890 MRQLGYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDC 949
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT TK IS I +R+II RD RFH FKDG CSC D+W
Sbjct: 950 HTATKFISKITKRQIIARDSNRFHHFKDGVCSCGDFW 986
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 209/397 (52%), Gaps = 8/397 (2%)
Query: 26 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
++++ Q +L+ C KNL + ++++ H+ K G + F + L+ A G+
Sbjct: 105 HIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYA--KCGNTI 162
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A IF + E + +N L+ G+V+ +EEA L+ +M + V+PD TF ++ ACA
Sbjct: 163 SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ + +G +++ + K G++ DLFV +LINM+ KC + A+ +F + + + +W++
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTS 282
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I A +G + + LF M E +P++ VS+L AC H AL+ GK H +
Sbjct: 283 MITGLARHGRFKQACNLFQRMEEEGV-QPDKVAFVSLLRACNHPEALEQGKKVHARMKEV 341
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V T+++ MY KCG +E L +F ++ + ++++ MI+G A HG+ EA F
Sbjct: 342 GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFF 401
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
++M+ G+EP+ V ++ +L ACS + G D + +E + ++ + +
Sbjct: 402 NKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI-IEAGYGSDDRVRTALLSMYAK 460
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
G L +A + + + +QN V W ++++A H +
Sbjct: 461 CGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYD 496
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 200/394 (50%), Gaps = 28/394 (7%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIF 88
+++L+ C + LE+ KKVHA + + G W+ V T LS + GSM+ A +F
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVG--WD---TEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ + +I GF + +EA +N+M E G+EP+ TF ++ AC+ ALK
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G QI H+ + G+ D V+ +L++MY KC ++ A +F+++ +++V +W+A+I A+
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
+ + L F + E +P S S+L+ C +L+LGK H +++ ++
Sbjct: 491 QHEQYDNALATFQALLKEGI-KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDL 549
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +L+ M+V CG L LF M + ++++ +I+G HG+ + A F M
Sbjct: 550 HVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC-------VVDLMG 381
G++PD + + G+L+AC+ + EG +L I T + C ++ +
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEG------RRLHALI--TEAAFDCDVLVGTGLISMYT 661
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G + +A ++ +P ++N W S+++ H
Sbjct: 662 KCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQH 694
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 178/335 (53%), Gaps = 5/335 (1%)
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
C +F I + N ++ K +F EA+ + + ++ T+ AL + C K
Sbjct: 66 CVVFADIKDTQKA--NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKF 123
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ L +G +I+ H+ K G + D+F++N+LINMY KC A IF M +K V SW+ ++
Sbjct: 124 KNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLL 183
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ +GL+ E KL +M + +P++ VS+L+AC +D G+ + +++
Sbjct: 184 GGYVQHGLYEEAFKLHEQMVQDSV-KPDKRTFVSMLNACADARNVDKGRELYNLILKAGW 242
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
++ V T+LI+M++KCG + +F + + +T++ MI+GLA HG+ K+A ++F
Sbjct: 243 DTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQR 302
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M EG++PD V +V +L AC+H + +G RMK E + ++ + + G
Sbjct: 303 MEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMK-EVGWDTEIYVGTAILSMYTKCG 361
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ +ALE+ + +N V W ++++ H ++
Sbjct: 362 SMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRID 395
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 333/579 (57%), Gaps = 18/579 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL+TC +L +++H VLK GF +N + +S L+ A G +D+A IFR++
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA--KLGKLDHALKIFRRLK 535
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + +I G+ + +F EAL L+ EM ++G+ DN F + ACA +QAL +G Q
Sbjct: 536 EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ 595
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH G+ DL V N+L+++Y +C KV A F ++ K SW+++I+ A +G
Sbjct: 596 IHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGH 655
Query: 213 WSECLKLFGEMN------NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
E L LF +M+ N + P S +V + LGK H +I+
Sbjct: 656 CEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANV-------KLGKQIHAMIIKTGHDS 708
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V LI +Y KCG ++ F M +K +++++ M++G + HG G +ALS+F +M
Sbjct: 709 ETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMK 768
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+ G+ P+ V +VGVLSACSH GLV+EG+ F M+ + +VP +HY CVVDL+GR+G+L
Sbjct: 769 QLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLL 828
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
A ++ MPIQ + +V R+LLSA VH N++IGE AA +L ++ + YVLLSNMY
Sbjct: 829 SRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMY 888
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A +W + R M +G+ + PG S +EV V+ F + D+ HP D IYE + +
Sbjct: 889 AVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLN 948
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
GY P + +L D + +K HS+KLAIAF L+ LS +PI + +NLR+C
Sbjct: 949 ELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCG 1008
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + K +S I +R I+VRD RFH FK G CSC+DYW
Sbjct: 1009 DCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 194/380 (51%), Gaps = 10/380 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C +E +K ++H VLK GF + + LV S G+ A +F +
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTL--YSRLGNFIPAEQVFNAML 333
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +N+LI G ++ ++AL L+ +M ++PD T +L AC+ + AL G Q
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H + K G D+ ++ +L+++Y KC ++ A F + ++V W+ ++ A+
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E K+F +M E P + S+L C+ L A+DLG+ H +++ NV V +
Sbjct: 454 LNESFKIFTQMQMEGI-EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSS 512
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ L +FR + +K ++++ MI+G A H + EAL++F EM +G+
Sbjct: 513 VLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D++ + +SAC+ +N+G + + Y +V + +V L R G + +A
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN--ALVSLYARCGKVRDAYF 630
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
+ ++++ W SL+S
Sbjct: 631 AFDKI-FSKDNISWNSLISG 649
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 194/384 (50%), Gaps = 11/384 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+K+HA + G+ + F + L+ + G ++ A +F + + + + ++ G
Sbjct: 190 EKIHARTITHGYENSLFVCNPLIDLYFKN--GFLNSAKKVFDGLQKRDSVSWVAMLSGLS 247
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ EEA+ L+ +M GV P + F ++ AC K++ K G Q+HG V K GF + +
Sbjct: 248 QSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETY 307
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N+L+ +Y + A +F M Q+ S++++I+ + G + L+LF +M +
Sbjct: 308 VCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLD- 366
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
C +P+ + S+LSAC+ +GAL +GK H I+ + ++I+E +L+D+YVKC ++
Sbjct: 367 CLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTA 426
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
F + + ++VM+ + E+ IF++M EG+EP+ Y +L CS
Sbjct: 427 HEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSL 486
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WR 406
V+ G ++ L+ V ++D+ + G L AL++ + + ++ DVV W
Sbjct: 487 RAVDLGEQIHTQV-LKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRL--KEKDVVSWT 543
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQ 430
++++ H A NLF+
Sbjct: 544 AMIAGYAQHEKFA----EALNLFK 563
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 214/436 (49%), Gaps = 35/436 (8%)
Query: 1 MTRTSVLHQSLL--LTQPEEPPKGPELNLRL----KEQECLTI---LKTCKNLEEF---K 48
+ R V + SL+ L+Q K EL ++ + +C+T+ L C ++ K
Sbjct: 333 LQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK 392
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSIFRQIDEPGAFDFNTLIR 104
+ H++ +K G +S+++ AL + A F + +N ++
Sbjct: 393 QFHSYAIKAGM------SSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+ E+ ++ +M G+EP+ FT+P++ + C+ L+A+ G QIH V K GF+
Sbjct: 447 AYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQF 506
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+++V + LI+MY K K++ A IF+++ +K V SW+A+IA +A + ++E L LF EM
Sbjct: 507 NVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQ 566
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
++ + S +SAC + AL+ G+ H + + ++ V +L+ +Y +CG +
Sbjct: 567 DQGI-HSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKV 625
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
F + K ++++ +ISG A G +EALS+FS+M + G E + + +SA
Sbjct: 626 RDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAA 685
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPT-----VQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
++ V G ++ I+ T + ++ L + G + +A MP +
Sbjct: 686 ANVANVKLG------KQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-E 738
Query: 400 QNDVVWRSLLSASKVH 415
+N++ W ++L+ H
Sbjct: 739 KNEISWNAMLTGYSQH 754
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 186/402 (46%), Gaps = 15/402 (3%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHW-- 78
E +R Q L +L C + F K+H +LK GF CA ++ + +
Sbjct: 61 ERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGF-----CAEVVLCERLMDLYIA 115
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G +D A ++F ++ +N ++ FV L L+ M + V+PD T+ +
Sbjct: 116 FGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGV 175
Query: 138 FKACAKLQALKEGMQ-IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ C ++ IH G+E LFV N LI++Y K + A +F + ++
Sbjct: 176 LRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRD 235
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW A+++ + +G E + LF +M+ + P I SVLSACT + +G+ H
Sbjct: 236 SVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVY-PTPYIFSSVLSACTKVEFYKVGEQLH 294
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
G +++ +L V +L+ +Y + G +F M + +++Y+ +ISGL+ G
Sbjct: 295 GLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSD 354
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
+AL +F +M + L+PD V +LSACS G + G F ++ + + G +
Sbjct: 355 KALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ-FHSYAIKAGMSSDIILEGAL 413
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
+DL + + A E S +N V+W +L A + NL
Sbjct: 414 LDLYVKCSDIKTAHEFFLSTET-ENVVLWNVMLVAYGLLDNL 454
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 138/299 (46%), Gaps = 20/299 (6%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M ERGV ++ T+ L C +G ++HG + K+GF ++ + L+++Y
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
++ A +F +M + ++ W+ ++ + + L LF M EK +P+E VL
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKV-KPDERTYAGVLR 177
Query: 242 ACTHLGALDLG----KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
C G D+ + H I + ++ V LID+Y K G L +F + +
Sbjct: 178 GC---GGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR 234
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----HAGLVNE 352
+++ M+SGL+ G +EA+ +F +M G+ P ++ VLSAC+ G
Sbjct: 235 DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLH 294
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
GL+ LE + +V L R G A ++ +M +Q+++V + SL+S
Sbjct: 295 GLVLKQGFSLETYVC------NALVTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLISG 346
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F + E+ R + +L C G G HG +++ V++ L+D+Y+
Sbjct: 55 FLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYI 114
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
G L+ + +F M + ++ ++ L +F ML+E ++PD+ Y G
Sbjct: 115 AFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAG 174
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH------YGC--VVDLMGRAGMLGEALE 391
VL C G + C +++ T+ H + C ++DL + G L A +
Sbjct: 175 VLRGC---GGGDVPFHCVEKIHAR-----TITHGYENSLFVCNPLIDLYFKNGFLNSAKK 226
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
+ + +++ V W ++LS
Sbjct: 227 VFDGLQ-KRDSVSWVAMLSG 245
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 335/571 (58%), Gaps = 18/571 (3%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMDYACSIFRQIDEPGAFDFNTLIRG 105
+++HA +L+ N + + ALS ++Y+C +F Q P NT+IR
Sbjct: 27 LRQIHAVLLRTSLIRNSDVFHHFFSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPA-------LFKACAKLQALKEGMQIHGHVF 158
F E L+ + N +FPA K C K L G+QIHG +F
Sbjct: 87 FSLSQTPCEGFRLFRALRR------NISFPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
GF D + +L+++Y CE A +F ++ Q+ SW+ +I+ + N + L
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPQRDTVSWNVLISCYLRNKRTRDVLV 200
Query: 219 LFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
LF +M N+ +C +P+ + L AC +LGALD GK H + N + + + +L+
Sbjct: 201 LFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY +CG ++K +F M ++ ++++ MISGLAM+G GKEA+ F+EML+ G+ P++
Sbjct: 261 MYSRCGSMDKAYEVFNRMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
G+LSACSH+GLV+EG++ FDRM+ E++I P + HYGC+VDL+GRA +L +A LI+S
Sbjct: 321 LTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLLDKAYSLIKS 380
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
M ++ + +WR+LL A +VH N+E+GE +L + + DYVLL N Y+ +W V
Sbjct: 381 MEMKPDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNTYSSVGKWEKV 440
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
++R+ M K + +PG S +E+ V++F+ D SHP + IY+M+ ++ QLK GY
Sbjct: 441 TELRSLMKKKRIQTNPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 516 PDISQVLRDVD-EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
+I+ L ++D E+EK L+ HS+KLAIAF ++ + IR+ +NLR C DCH + K
Sbjct: 501 AEITSELHNLDSEEEKGYALRYHSEKLAIAFGILVTPPETTIRVTKNLRTCVDCHNFAKF 560
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S +Y+R +IVRDR RFH FK G+CSC D+W
Sbjct: 561 VSDVYDRVVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 338/572 (59%), Gaps = 6/572 (1%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL+TC +E +++H+ +K GF + + + L+ S + +D A I +++
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDM--YSKYRCLDKARKILEMLEK 409
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+V+ EEAL + EM + GV PDN + ACA ++A+++G+QI
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V+ G+ D+ + N+L+N+Y +C + E A ++F+++D K +W+ +I+ + L+
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLY 529
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L +F +M+ + +S +SA +L + GK HG ++ V +
Sbjct: 530 EQALMVFMKMSQAGA-KYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI +Y KCG +E +F M+ + +++++ +I+ + HG+G EAL +F +M +EGL+P+
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV ++GVL+ACSH GLV EGL F M Y + P HY CVVD++GRAG L A +
Sbjct: 649 DVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFV 708
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MPI N ++WR+LLSA KVH N+EIGE+AAK+L ++ H + YVLLSN YA +W
Sbjct: 709 DEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWA 768
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ ++R M +G+ + PG S +EV V+ F DR HP D IY+ + ++ +L G
Sbjct: 769 NRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIG 828
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y + + + ++++K HS+KLA+AF L+ L P+R+ +NLR+C+DCH++ K
Sbjct: 829 YKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMK 888
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S + REI++RD RFH F G+CSC DYW
Sbjct: 889 FTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 8/379 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C + F + +HA V K F F + L+A +GS A +F +
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIAL--YLGFGSFKLAERVFCDML 206
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
FNTLI G + E AL +++EM G+ PD T +L ACA + L++G Q
Sbjct: 207 FCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H ++ K G D + SL+++Y KC +E A IF D+ +V W+ ++ A+
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ ++FG+M P + +L CT G ++LG+ H I+N ++ V
Sbjct: 327 LAKSFEIFGQMQATGI-HPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K CL+K + M+ + ++++ MI+G H +EAL+ F EM G+ P
Sbjct: 386 VLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWP 445
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D++ SAC+ + +GL R+ + + + +V+L R G EA L
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAFSL 504
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+ + ++++ W L+S
Sbjct: 505 FREID-HKDEITWNGLISG 522
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 199/401 (49%), Gaps = 17/401 (4%)
Query: 24 ELNLRLKEQECLTI---LKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCA 74
E+ L +C+T+ L C +L++ K++H+++LK G ++ +L+ C
Sbjct: 235 EMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC- 293
Query: 75 LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
G ++ A IF D +N ++ + + + ++ ++ +M G+ P+ FT+
Sbjct: 294 ----GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTY 349
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
P + + C ++ G QIH K GFE D++V LI+MY K ++ A I + +++
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEK 409
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+ V SW+++IA + + E L F EM + W P+ L S SAC + A+ G
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVW-PDNIGLASAASACAGIKAMRQGLQ 468
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H + + A ++ + +L+++Y +CG E+ LFR + K ++T++ +ISG
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
++AL +F +M + G + + ++ +SA ++ + +G R ++ +
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGR-AVKTGHTSETEVAN 587
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ L G+ G + +A + M + +N+V W +++++ H
Sbjct: 588 ALISLYGKCGSIEDAKMIFSEMSL-RNEVSWNTIITSCSQH 627
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 158/333 (47%), Gaps = 6/333 (1%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F+++ + ++ G+ + +EA LY++M V P + ++ AC K +
Sbjct: 100 VFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKL 159
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+G IH V+K F + FV N+LI +Y + A +F M +++ +I+
Sbjct: 160 FAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISG 219
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
HA G L++F EM RP+ + S+L+AC +G L GK H L++ +
Sbjct: 220 HAQCGHGECALQIFDEMQLSGL-RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSF 278
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ I E SL+D+YVKCG +E +F + + +++M+ ++ IF +M
Sbjct: 279 DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ P+ Y +L C+ G + G + ++ + G ++D+ + L
Sbjct: 339 ATGIHPNKFTYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYRCL 397
Query: 387 GEALELIQSMPIQQNDVV-WRSLLSASKVHHNL 418
+A ++++ + ++ DVV W S++ A V H+
Sbjct: 398 DKARKILEML--EKRDVVSWTSMI-AGYVQHDF 427
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 140/303 (46%), Gaps = 30/303 (9%)
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
++IH G D + N LI++Y K V A +FK++ + SW A+++ +A
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 211 GLWSECLKLFGEMNNEKCWR---PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
GL E +L+ +M+ W P +L SVLSACT G+ H + +
Sbjct: 123 GLGKEAFRLYSQMH----WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSE 178
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +LI +Y+ G + +F M ++T++ +ISG A G G+ AL IF EM
Sbjct: 179 TFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQL 238
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
GL PD V +L+AC+ G + +G L M +Y G ++DL +
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYIT------EGSLLDLYVK 292
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSA----SKVHHNLEI-GEIAAKNLFQINSHHPS 437
G + A ++ ++ + N V+W +L A S + + EI G++ A + HP+
Sbjct: 293 CGDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGI------HPN 345
Query: 438 DYV 440
+
Sbjct: 346 KFT 348
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/576 (38%), Positives = 339/576 (58%), Gaps = 12/576 (2%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
+ LK C + E +++H+ ++K + F + LV + C L ++ A F
Sbjct: 364 SALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDL-----LEDARMAFN 418
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ E +N +I G+ + E EAL L+ EM + G+ + T + K+ A LQ +
Sbjct: 419 LLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHV 478
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
Q+HG K GF D++V NSLI+ YGKC VE A IF++ + S++++I A+A
Sbjct: 479 CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQ 538
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G E LKLF EM + + +P+ + S+L+AC +L A + GK H +++ L++
Sbjct: 539 YGQGEEALKLFLEMQDMEL-KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIF 597
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
SL++MY KCG ++ F + ++ +++S MI GLA HG G++AL +F++ML+EG
Sbjct: 598 AGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEG 657
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+ + V VL AC+HAGLV E L F+ M+ + P +HY C++DL+GRAG + EA
Sbjct: 658 VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEA 717
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+EL+ MP + N VW +LL A+++H ++E+G AA+ LF + +VLL+N+YA A
Sbjct: 718 VELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASA 777
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W +VA++R M + + PG S +EV KVY F+ DRSH IY + ++ +
Sbjct: 778 GKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLM 837
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
GY P + L DV++ EK L HS+KLA+AF LI QG+PIR+ +NLR+C DCH
Sbjct: 838 DKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCH 897
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T K I I REIIVRD RFH FKDG+CSC DYW
Sbjct: 898 TAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 193/383 (50%), Gaps = 8/383 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++ C L + K +H +++K G+ W+PF A+ LV A G + A S+F +I
Sbjct: 263 SMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA--KVGDLADAISVFEKIK 320
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+P +N +I G V E+AL L +M G+ P+ FT + KACA + + G Q
Sbjct: 321 QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQ 380
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+ E DLFV L++MY KC+ +E A F + +K + +W+AII+ ++
Sbjct: 381 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 440
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L LF EM+ E ++ L ++L + L + + + HG +++ ++ V
Sbjct: 441 DMEALSLFVEMHKEGIGF-NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVN 499
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SLID Y KC +E +F ++++ MI+ A +GQG+EAL +F EM L+P
Sbjct: 500 SLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKP 559
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D V +L+AC++ +G + L+Y V + +V++ + G + +A
Sbjct: 560 DRFVCSSLLNACANLSAFEQGKQLHVHI-LKYGFVLDIFAGNSLVNMYAKCGSIDDAGRA 618
Query: 393 IQSMPIQQNDVVWRSLLSASKVH 415
+ ++ V W +++ H
Sbjct: 619 FSEL-TERGIVSWSAMIGGLAQH 640
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 190/375 (50%), Gaps = 11/375 (2%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
T K+L ++HAH+ K G +P ++L+ S + YA + + EP +
Sbjct: 68 TTKSLRPGLQIHAHITKSGLSDDPSIRNHLINL--YSKCRNFGYARKLVDESSEPDLVSW 125
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
+ LI G+ + AL ++EM GV+ + FTF ++ KAC+ ++ L+ G Q+HG V
Sbjct: 126 SALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVV 185
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
GFE D+FV N+L+ MY KC++ + +F ++ +++V SW+A+ + + E + L
Sbjct: 186 SGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGL 245
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F EM +P E L S+++ACT L GK HG LI+ + +L+DMY
Sbjct: 246 FYEMVLSGI-KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
K G L + +F + ++++ +I+G +H ++AL + +M R G+ P+
Sbjct: 305 KVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSS 364
Query: 340 VLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
L AC+ GL G +M +E + +V +VD+ + +L +A +
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG----LVDMYSKCDLLEDARMAFNLL 420
Query: 397 PIQQNDVVWRSLLSA 411
P +++ + W +++S
Sbjct: 421 P-EKDLIAWNAIISG 434
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 150/299 (50%), Gaps = 19/299 (6%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P + ++ L C ++L+ G+QIH H+ K G D ++N LIN+Y KC +A +
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCWRPEESILVSVLSACTHL 246
+ + + SWSA+I+ +A NGL L F EM+ KC E SVL AC+ +
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKC---NEFTFSSVLKACSIV 170
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
L +GK HG ++ + +V V +L+ MY KC LF + ++ ++++ +
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC-----SHAGLVNEGLLCFDRMK 361
S EA+ +F EM+ G++P++ +++AC S G + G L +K
Sbjct: 231 SCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL----IK 286
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLE 419
L Y P + +VD+ + G L +A+ + + I+Q D+V W ++++ +H + E
Sbjct: 287 LGYDWDPFSAN--ALVDMYAKVGDLADAISVFEK--IKQPDIVSWNAVIAGCVLHEHHE 341
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/590 (38%), Positives = 342/590 (57%), Gaps = 37/590 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ VHAHV++ G N AS+LVA A ++ + D P A+ N LI G
Sbjct: 43 RAVHAHVVRLGMGRNAHVASSLVAAYTAGG--DGAAARALVGECDTPVAW--NALISGHN 98
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK-LQALKEGMQIHGHVFKVGFECDL 166
+ F E+ + +M G P T+ ++ AC K + + GMQ+HG V G DL
Sbjct: 99 RGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDL 158
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG--------------- 211
V+N+L++MY +C + A +F M +SV SW+++++ A G
Sbjct: 159 RVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPER 218
Query: 212 ------------LWS----ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+W+ E L++F EM +E +VSV++AC LGAL++G+
Sbjct: 219 DTVSWTAMIDGYVWAARFREALEMFREMQYSNV-SADEFTMVSVITACAQLGALEMGEWV 277
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+ R ++ V +LIDMY KCG +E+ L +F+ M + + T++ +I GLA++G
Sbjct: 278 RVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYE 337
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EA+ +F M+R PD+V ++GVL+AC+HAGLV++G F M Y I P V HYGC
Sbjct: 338 EEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGC 397
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++DL+GRAG + EAL+ I MP+ N +W +LL+A +VH N EIGE+ A+ L +++ +
Sbjct: 398 IIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPEN 457
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
Y+LLSN+YA+ RW DV ++R + KG+ + PG SL+E+ +++FV+ D+SHP
Sbjct: 458 SMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMS 517
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
IY + + L GY PD+++V +V E EK++ L HS+KLAIAFAL+ +
Sbjct: 518 KEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTV 577
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLRMC DCH KLIS +Y RE++VRDR RFH F+ G CSC+DYW
Sbjct: 578 IRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 45/335 (13%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQ----ALKEGMQIHGHVFKVGFECDLFV 168
E+A+ Y M RG PD +TFPAL KA A+ + +H HV ++G + V
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
+SL+ Y A A+ + D + +W+A+I+ H G + E F +M
Sbjct: 61 ASSLVAAYTAGGDGAAARALVGECD--TPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118
Query: 229 WRPEESILVSVLSACTHLGALD--LGKCTHGSLIRNISALNVIVETSLIDMYVKC----- 281
P VSVLSAC G D LG HG ++ + ++ VE +L+DMY +C
Sbjct: 119 -APTPVTYVSVLSACGK-GTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGS 176
Query: 282 --------------------------GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
G +++ LF M ++ ++++ MI G +
Sbjct: 177 AWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARF 236
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG- 374
+EAL +F EM + D+ V V++AC+ G + G + R+ + + + G
Sbjct: 237 REALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGE--WVRVYMSRQGIKMDAFVGN 294
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++D+ + G + AL++ + M ++ W +++
Sbjct: 295 ALIDMYSKCGSIERALDVFKGMH-HRDKFTWTAII 328
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 341/576 (59%), Gaps = 13/576 (2%)
Query: 36 TILKTCK---NLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
+LK C +L ++ + G+ + F + NL A C G MD A +F
Sbjct: 110 VVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKC-----GKMDEAMRVFD 164
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + T+I G + + EA+ +Y +M ++ VE D L +AC L K
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G+ IHG++ + D+ VQ SL++MY K +E AS +F++M K+V SWSA+I+ A
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG L+L +M + ++P+ LVSVL AC+ +G L LGK HG ++R + + +
Sbjct: 285 NGFAGNALQLVVDMQSFG-YKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLH-FDCV 342
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
T++IDMY KCG L +F ++ + ++++ +I+ +HG G+EALS+F +M
Sbjct: 343 SSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETN 402
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++PD + +LSA SH+GLV +G F M EY+I P+ +HY C+VDL+ RAG + EA
Sbjct: 403 VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEA 462
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
ELI+SM + +W +LLS H IGE+AAK + ++N P Y L+SN +A A
Sbjct: 463 QELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATA 522
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+RW +VA++R M G+ + PG+S++EV K++ F+ +D+SH ++ I +++ ++++++
Sbjct: 523 RRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEM 582
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY P VL +++E+ K L HS++LAIAF L++ G+ + I +NLR+C DCH
Sbjct: 583 KAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCH 642
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I REI+VRD KRFH FKDG CSC DYW
Sbjct: 643 EATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 203/400 (50%), Gaps = 16/400 (4%)
Query: 25 LNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
+ L + + T+L T K+ K+HA ++ G F + + L+ + A G ++ A
Sbjct: 1 MRLVVGSKSLKTLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYA--RLGHIESA 58
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F + + G +N +I + + EAL LY+ M GV PD+ T+ + KAC +
Sbjct: 59 RQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRS 118
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
L+ G + G+ D+FV +++N+Y KC K++ A +F +M ++ + W+ +I
Sbjct: 119 LDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMI 178
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A NG E + ++ +M+ ++ + +++ ++ ACT LG +G HG +IR
Sbjct: 179 TGLAQNGQAREAVDIYRQMHKKRV-EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDI 237
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
++VIV+TSL+DMY K G LE C+FR M K +++S +ISG A +G AL + +
Sbjct: 238 IMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVD 297
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC-----VVDL 379
M G +PD V V VL ACS G + G K + + H+ C V+D+
Sbjct: 298 MQSFGYKPDSVSLVSVLLACSQVGFLKLG-------KSVHGYIVRRLHFDCVSSTAVIDM 350
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ G L A + + ++ + W +++++ +H + E
Sbjct: 351 YSKCGSLSFARTVFDQISF-RDSISWNAIIASYGIHGSGE 389
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 29/221 (13%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C L+ K VH ++++ F C S+ S GS+ +A ++F QI
Sbjct: 311 VSVLLACSQVGFLKLGKSVHGYIVRRLHF---DCVSSTAVIDMYSKCGSLSFARTVFDQI 367
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG- 150
+ +N +I + EEAL L+ +M E V+PD+ TF +L A + +++G
Sbjct: 368 SFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGR 427
Query: 151 --MQIHGHVFKVG-----FECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSA 202
I + +K+ + C ++++ + +VE A + + M + +A W A
Sbjct: 428 YWFSIMVNEYKIQPSEKHYAC-------MVDLLSRAGRVEEAQELIESMITEPGIAIWVA 480
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKC--WRPEESILVSVLS 241
+++ ++G + L GEM +K P++ + S++S
Sbjct: 481 LLSGCLNHGKF-----LIGEMAAKKVLELNPDDPGIYSLVS 516
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 343/609 (56%), Gaps = 40/609 (6%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L +C E +++H+H+ + G + A+ L+ + A F ++
Sbjct: 284 VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITM--YCKCNCIQDARETFDRM 341
Query: 92 DEPGAFDFNTLIRGFVK-----EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+ ++ +I G+ + + +E L M GV P+ TF ++ KAC+ A
Sbjct: 342 SKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGA 401
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L++G QIH + KVGFE D +Q ++ NMY KC + A +F +M+ K+V +W++++
Sbjct: 402 LEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTM 461
Query: 207 HASNGLWSECLKLFGEMNNEKC------------------------------WRPEESIL 236
+ G + K+F EM+ ++P+ +
Sbjct: 462 YIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTI 521
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+S+L AC L AL+ GK H ++ + +V TSLI MY KCG + + +F +++
Sbjct: 522 ISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISN 581
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ + ++ M++G HG G EA+ +F ML+E + P+++ + V+SAC AGLV EG
Sbjct: 582 RDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI 641
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M+ ++R+ P QHYGC+VDL+GRAG L EA E IQ MP + + VW +LL A K H
Sbjct: 642 FRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHD 701
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N+++ E AA ++ ++ + S YV LSN+YA+A RW D K+R M KGL + G S +
Sbjct: 702 NVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSI 761
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
E+ +++ FV++D +HP D+I+ + + ++K GY+PD+ VL DVDE +K L
Sbjct: 762 EIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCH 821
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLAIA+ L+ G+PIRI +NLR+C DCHT TK IS I +REI+ RD RFH FK+
Sbjct: 822 HSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKN 881
Query: 597 GTCSCRDYW 605
GTCSC D+W
Sbjct: 882 GTCSCGDFW 890
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 207/432 (47%), Gaps = 29/432 (6%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
I++ C L F K VH + + G + + ++L+ S +G + +FR++
Sbjct: 84 IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINF--YSKFGDVASVEQVFRRMTL 141
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
++++I + +A + M + +EP+ TF ++ KAC L++ +I
Sbjct: 142 RDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREI 201
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V G E D+ V +LI MY KC ++ A IF++M +++V SW+AII A+A +
Sbjct: 202 HTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKL 261
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+E +L+ +M + P VS+L++C AL+ G+ H + +V+V +
Sbjct: 262 NEAFELYEKM-LQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANA 320
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG-QGKEALS----IFSEMLRE 328
LI MY KC C++ F M+ + +++S MI+G A G Q KE+L + M RE
Sbjct: 321 LITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRRE 380
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G+ P+ V ++ +L ACS G + +G + K+ + ++Q + ++ + G +
Sbjct: 381 GVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQT--AIFNMYAKCGSIY 438
Query: 388 EALELIQSMPIQQNDVVWRSLL----------SASKVHHNLEIGEIAAKNLFQINSHHPS 437
EA ++ M +N V W SLL SA KV + + + NL
Sbjct: 439 EAEQVFSKME-NKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSG 497
Query: 438 D----YVLLSNM 445
D + LLS+M
Sbjct: 498 DIAKVFELLSSM 509
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 56/460 (12%)
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
K +EA+ L + +RG+ ++ T+ + + CAKL+ ++G +H + ++G D++
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ NSLIN Y K V +F++M + V +WS++IAA+A N ++ F M +
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P +S+L AC + L+ + H + + +V V T+LI MY KCG +
Sbjct: 175 I-EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLA 233
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F+ M ++ ++++ +I A H + EA ++ +ML+ G+ P+ V +V +L++C+
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTP 293
Query: 348 GLVNEG------------------------LLC-----------FDRMKLEYRIVPTVQH 372
+N G + C FDRM I +
Sbjct: 294 EALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMI 353
Query: 373 YGCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
G L E +L++ M + N V + S+L A VH LE G +
Sbjct: 354 AGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEIS 413
Query: 430 QINSHHPSDYVLLS---NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
++ SD L + NMYA+ Y+ ++ ++M +K N SL+ + K
Sbjct: 414 KVG--FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK--NVVAWASLLTMYIKCGDLT 469
Query: 487 SQDR--SHPAWDNIYEMIHQMEWQLKFEGY--SPDISQVL 522
S ++ S + N+ + W L GY S DI++V
Sbjct: 470 SAEKVFSEMSTRNV------VSWNLMIAGYAQSGDIAKVF 503
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/569 (38%), Positives = 337/569 (59%), Gaps = 7/569 (1%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
+L + VH ++ GF +PF A+ L+ GS+D A +F + E + +N
Sbjct: 92 NSLSDGLDVHRRLVSSGFDQDPFLATKLINM--YYELGSIDRARKVFDETRERTIYVWNA 149
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA----KLQALKEGMQIHGHV 157
L R +E L LY +M G+ D FT+ + KAC + L++G +IH H+
Sbjct: 150 LFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHI 209
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ G+E ++ V +L+++Y K V +A+++F M K+ SWSA+IA A N + + L
Sbjct: 210 LRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKAL 269
Query: 218 KLFGEMNNEKCWR-PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+LF M E P +V+VL AC L AL+ GK HG ++R + V +LI
Sbjct: 270 ELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALIT 329
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY +CG + G +F M ++ ++++ +IS MHG GK+A+ IF M+ +G P +
Sbjct: 330 MYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYIS 389
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ VL ACSHAGLV EG + F+ M +YRI P ++HY C+VDL+GRA L EA++LI+ M
Sbjct: 390 FITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 449
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
+ VW SLL + ++H N+E+ E A+ LF++ + +YVLL+++YA A+ W +
Sbjct: 450 HFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAK 509
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
+ + ++GL + PG S +EV RKVY FVS D +P + I+ ++ ++ ++K +GY P
Sbjct: 510 SVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVP 569
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
+ VL D+DE+EK + GHS+KLA+AF LI+ +G IRI +NLR+C DCH TK IS
Sbjct: 570 QTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLRLCEDCHAVTKFIS 629
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
REI+VRD RFH FKDG CSC DYW
Sbjct: 630 KFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 122/231 (52%), Gaps = 5/231 (2%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ C+ + L++ K++HAH+L+ G+ N + L+ A +GS+ YA S+F +
Sbjct: 187 KACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYA--KFGSVSYANSVFCAM 244
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE--PDNFTFPALFKACAKLQALKE 149
++ +I F K +AL L+ M + P++ T + +ACA L AL++
Sbjct: 245 PTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQ 304
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IHG++ + G + L V N+LI MYG+C ++ +F M + V SW+++I+ +
Sbjct: 305 GKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGM 364
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+G + +++F M ++ P ++VL AC+H G ++ GK S++
Sbjct: 365 HGFGKKAIQIFENMIHQGS-SPSYISFITVLGACSHAGLVEEGKILFESML 414
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 145/300 (48%), Gaps = 23/300 (7%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P TF L +CA+ +L +G+ +H + GF+ D F+ LINMY + ++ A +
Sbjct: 76 PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW--RPEESILVS-VLSACT- 244
F + ++++ W+A+ A A G E L L+ +MN W P + + VL AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMN----WIGIPSDRFTYTFVLKACVV 191
Query: 245 ---HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
+ L GK H ++R+ N+ V T+L+D+Y K G + +F M K ++
Sbjct: 192 SELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVS 251
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLE--PDDVVYVGVLSACSHAGLVNEGLLCFD- 358
+S MI+ A + +AL +F M+ E + P+ V V VL AC+ + +G L
Sbjct: 252 WSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGY 311
Query: 359 --RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
R L+ I+P + ++ + GR G + + +M + DVV W SL+S +H
Sbjct: 312 ILRRGLD-SILPVLN---ALITMYGRCGEILMGQRVFDNM--KNRDVVSWNSLISIYGMH 365
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/588 (37%), Positives = 342/588 (58%), Gaps = 19/588 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGS------------ 80
++LK L+ K +HA ++ G + + A+ L+ T A H
Sbjct: 115 SLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGES 174
Query: 81 -MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALF 138
+D +F + +NT+I GF + + EAL + EM + G ++PD+FT ++
Sbjct: 175 GIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL 234
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A+ + +G +IHG+ + GF+ D+F+ +SLI+MY KC ++E + F + +K
Sbjct: 235 PIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAI 294
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW++IIA NG + L F M E +P SV+ AC HL AL LG+ HG
Sbjct: 295 SWNSIIAGCVQNGEFDRGLGFFRRMLKENV-KPMAVSFSSVIPACAHLTALSLGRQLHGC 353
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++R N + +SL+DMY KCG ++ +F + + + ++ +I G AMHG +A
Sbjct: 354 IVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDA 413
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+S+F ML +G+ P V ++ VL+ACSHAGLV+EG F+ M+ ++ I P ++HY V D
Sbjct: 414 VSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVAD 473
Query: 379 LMGRAGMLGEALELIQSM-PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
L+GRAG L EA + I +M +Q VW LL+A + H ++E+ E L ++S +
Sbjct: 474 LLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMG 533
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVL+SN+Y+ AQRW D A++R M KGL ++P S +EV +V+ F++ D+SHP +D
Sbjct: 534 AYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDK 593
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
I + + + Q++ EGY D +QVL DVDE+ KRE L HS++LAIA+ +I + G+ IR
Sbjct: 594 INKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIR 653
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +N+R+C DCHT K I+ I REI VRD RFH FK+G+CSC DYW
Sbjct: 654 VIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 15/270 (5%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
++++I+ + + +N M V P+ FP+L KA L+ K +H
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 159 KVGFECDLFVQNSLINMYGKCEK---------------VEFASAIFKQMDQKSVASWSAI 203
++G + DL++ N+LIN Y K ++ +F M + V SW+ +
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA A NG++ E L + EM +P+ L S+L ++ GK HG +RN
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+V + +SLIDMY KC LE L F ++ K ++++ +I+G +G+ L F
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
ML+E ++P V + V+ AC+H ++ G
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLG 347
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/559 (38%), Positives = 331/559 (59%), Gaps = 5/559 (0%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H + +K G F + L+ G ++ A +F ++ +N++I G +
Sbjct: 191 MHVYAVKHGLDKELFVCNALIDV--YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQR 248
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD-LFV 168
+ AL ++ M GV PD T +L A A+ + +H +V + G++ D +
Sbjct: 249 GQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIA 308
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N++++MY K +E A +F M + SW+ +I + NGL +E ++ +G M +
Sbjct: 309 GNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEG 368
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+ + VSVL A +HLGAL G H I+ ++V V T LID+Y KCG L + +
Sbjct: 369 LKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAM 428
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
LF M + ++ +ISGL +HG G EAL++FS M +EG++PD V +V +L+ACSHAG
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAG 488
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV++G FD M++ Y IVP +HY C+ D++GRAG L EA IQ+MPI+ + VW +L
Sbjct: 489 LVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGAL 548
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A ++H N+E+G++A++NLF+++ + YVL+SNMYA+ +W V ++R+ + + L
Sbjct: 549 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQ 608
Query: 469 QSPGFSLVEVARKVYKFVS--QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
++PG+S +EV R V F S Q HP + I + + +++ GY D S VL+DV+
Sbjct: 609 KTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVE 668
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
+DEK L HS++LAIAF +I+ +P+ I +NLR+C DCH TK IS I EREIIVR
Sbjct: 669 DDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVR 728
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH FKDG CSC D+W
Sbjct: 729 DSNRFHHFKDGHCSCGDFW 747
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 14/386 (3%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
++++ + ++HA L+ G + F + +LV A +G + A +F ++ E
Sbjct: 75 SLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVH--AYLRFGRISEAYKVFDEMSER 132
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N ++ G + EA+ L+ M GV D T ++ C L + +H
Sbjct: 133 DVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMH 192
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ K G + +LFV N+LI++YGK +E A +F M+ + + +W++II+ G +
Sbjct: 193 VYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTA 252
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI-RNISALNVIVETS 273
LK+F M P+ LVS+ SA G K H ++ R ++I +
Sbjct: 253 AALKMFQGMRGSGV-SPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNA 311
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEP 332
++DMY K +E +F M + ++++ +I+G +G EA+ + M + EGL+
Sbjct: 312 IVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKA 371
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHY--GCVVDLMGRAGMLGEA 389
+V VL A SH G + +G+ RM L +I V Y C++DL + G L EA
Sbjct: 372 IQGTFVSVLPAYSHLGALQQGM----RMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEA 427
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVH 415
+ L + MP +++ W +++S VH
Sbjct: 428 MLLFEKMP-RRSTGPWNAIISGLGVH 452
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 146/317 (46%), Gaps = 12/317 (3%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFE--RGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
NTLI F + A L + PD FTFP+L +A + Q+H
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAP---SNASAAQLHACA 93
Query: 158 FKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
++G +F SL++ Y + ++ A +F +M ++ V +W+A+++ N +E
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ LFG M E + + SVL C LG L H +++ + V +LID
Sbjct: 154 VGLFGRMVGEGV-AGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y K G LE+ C+F M + +T++ +ISG GQ AL +F M G+ PD +
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272
Query: 337 YVGVLSACSHA--GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V + SA + G + L C+ M+ + + + +VD+ + + A +
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCY-VMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFD 330
Query: 395 SMPIQQNDVVWRSLLSA 411
SMP+ Q+ V W +L++
Sbjct: 331 SMPV-QDSVSWNTLITG 346
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 341/590 (57%), Gaps = 36/590 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCA-LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
K+ H +L+ GF N F S LV A +S G A F ++D +NT+I G
Sbjct: 160 KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRA---FDEVDSKNVVMYNTMITGL 216
Query: 107 VKEVEFEEALFLYNEMFER-------------------------------GVEPDNFTFP 135
++ EEA L+ M +R G+ D +TF
Sbjct: 217 LRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFG 276
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
++ AC L AL++G QIH ++ + ++ ++FV ++L++MY KC ++ A +F++M K
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK 336
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ SW+A+I + NG E +++F EM + P++ L SV+S+C +L +L+ G
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI-DPDDYTLGSVISSCANLASLEEGAQF 395
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + + + V +L+ +Y KCG +E LF M+ Q++++ ++SG A G+
Sbjct: 396 HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRA 455
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KE + +F +ML +G++PD V ++GVLSACS AG V +G F M+ ++ IVP HY C
Sbjct: 456 KETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTC 515
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++DL R+G L EA E I+ MP+ + + W +LLSA ++ ++EIG+ AA+NL +I+ +
Sbjct: 516 MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQN 575
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
P+ YVLL +M+A +W +VA++R M + + + PG S ++ KV+ F + D+SHP
Sbjct: 576 PASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCS 635
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
IYE + + ++ EGY PD+S VL DV + +K + HS+KLAIAF LI + Q P
Sbjct: 636 KGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMP 695
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCH TK IS I R+I+VRD RFH+F DG CSC D+W
Sbjct: 696 IRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 38/383 (9%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
N F + L++T L+H + ++F + + +N +I GF +A+ +Y
Sbjct: 71 NLFTYNALLST--LAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLA 128
Query: 122 MF--ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK- 178
+ + V P T + A + L G Q H + ++GF + FV + L++MY K
Sbjct: 129 LLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKM 188
Query: 179 ------------------------------CEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
C+ VE A +F+ M + +W+ ++
Sbjct: 189 SLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFT 248
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
NGL SE L++F M + ++ S+L+AC L AL+ GK H +IR NV
Sbjct: 249 QNGLESEALEIFRRMRFQGI-AIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNV 307
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY KC ++ +FR M K ++++ +I G +G +EA+ +FSEM R+
Sbjct: 308 FVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PDD V+S+C++ + EG F + L ++ + +V L G+ G + +
Sbjct: 368 GIDPDDYTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIED 426
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
A L M + V W +L+S
Sbjct: 427 AHRLFDEMSF-HDQVSWTALVSG 448
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 138/263 (52%), Gaps = 7/263 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C LE+ K++HA++++ + N F S LV S S+ A ++FR++
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDM--YSKCRSIKLAETVFRRMT 334
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ LI G+ + EEA+ +++EM G++PD++T ++ +CA L +L+EG Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQ 394
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V N+L+ +YGKC +E A +F +M SW+A+++ +A G
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGR 454
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M K +P+ + VLSAC+ G ++ G+ S+ ++ + +
Sbjct: 455 AKETIDLFEKM-LAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY 513
Query: 272 TSLIDMYVKCGCLEKGLCLFRMM 294
T +ID+Y + G L++ + M
Sbjct: 514 TCMIDLYSRSGKLKEAEEFIKQM 536
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 327/558 (58%), Gaps = 3/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +HA V K+GF ++ + LV GS+ C +F +N L+ GF
Sbjct: 451 ESIHACVCKYGFEYDNTVCNALVTM--YMKIGSVQDGCRVFEATTNRDLISWNALLSGFH 508
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ L ++N+M G P+ +TF ++ ++C+ L + G Q+H + K + + F
Sbjct: 509 DNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 568
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +L++MY K +E A IF ++ ++ + +W+ I+A +A +G + +K F +M E
Sbjct: 569 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 628
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P E L S LS C+ + LD G+ H I+ + ++ V ++L+DMY KCGC+E
Sbjct: 629 V-KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F + + ++++ +I G + HGQG +AL F ML EG PD+V ++GVLSACSH
Sbjct: 688 EVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHM 747
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GL+ EG F+ + Y I PT++HY C+VD++GRAG E I+ M + N ++W +
Sbjct: 748 GLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWET 807
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
+L A K+H N+E GE AA LF++ S+Y+LLSNM+A W DV +R M+++G+
Sbjct: 808 VLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGV 867
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PG S VEV +V+ F+S D SHP I+ + + +L GY+P+ VL +V +
Sbjct: 868 KKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSD 927
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
EK+E L HS++LA+AFAL+ S IRI +NLR+C DCH + K IS I +E++VRD
Sbjct: 928 REKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRD 987
Query: 588 RKRFHRFKDGTCSCRDYW 605
FH FK+G+CSC+++W
Sbjct: 988 INCFHHFKNGSCSCQNFW 1005
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 165/336 (49%), Gaps = 16/336 (4%)
Query: 21 KGPELNLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGF-----FWNPFCASNLVAT 72
+G + + + + ++ +L+TC +L E K +H V+K G WN N+ A
Sbjct: 118 RGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLV--NVYAK 175
Query: 73 CALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNF 132
C GS +YAC +F +I E + LI GFV E A+ L+ EM GVE + F
Sbjct: 176 C-----GSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEF 230
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
T+ KAC+ L+ G Q+H KVG DLFV ++L+++Y KC ++ A +F M
Sbjct: 231 TYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCM 290
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+++ SW+A++ A G + L LF M + + L +VL C + G L G
Sbjct: 291 PKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEI-NFSKFTLSTVLKGCANSGNLRAG 349
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ H IR L+ + L+DMY KCG L +F + D +++S +I+ L
Sbjct: 350 QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQK 409
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
GQ +EA +F M G+ P+ ++SA + G
Sbjct: 410 GQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 187/386 (48%), Gaps = 14/386 (3%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPF---CASNLVATCALSHWGSMDYACSIFR 89
T+LK C N L + VH+ ++ G + F C ++ + C L+ A +F
Sbjct: 335 TVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLA-----GDALKVFV 389
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+I++P ++ +I ++ + EA ++ M GV P+ FT +L A L L
Sbjct: 390 RIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYY 449
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IH V K GFE D V N+L+ MY K V+ +F+ + + SW+A+++
Sbjct: 450 GESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHD 509
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N L++F +M E + P +S+L +C+ L +DLGK H +++N N
Sbjct: 510 NETCDTGLRIFNQMLAEG-FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDF 568
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+L+DMY K LE +F + + ++V+++G A GQG++A+ F +M REG
Sbjct: 569 VGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG 628
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++P++ LS CS ++ G M ++ + +VD+ + G + +A
Sbjct: 629 VKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 687
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVH 415
E++ + ++ V W +++ H
Sbjct: 688 -EVVFDGLVSRDTVSWNTIICGYSQH 712
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 138/280 (49%), Gaps = 9/280 (3%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ + + CA L EG IHG V K G D + NSL+N+Y KC +A +F ++
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++ V SW+A+I + G S + LF EM E E + L AC+ L+ GK
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGV-EANEFTYATALKACSMCLDLEFGK 249
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H I+ ++ V ++L+D+Y KCG + +F M + ++++ +++G A G
Sbjct: 250 QVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMG 309
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
++ L++F M + VL C+++G + G + L RI + +
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVH---SLAIRIGCELDEF 366
Query: 374 --GCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLS 410
C+VD+ + G+ G+AL++ + I+ DVV W ++++
Sbjct: 367 ISCCLVDMYSKCGLAGDALKVF--VRIEDPDVVSWSAIIT 404
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/616 (36%), Positives = 349/616 (56%), Gaps = 38/616 (6%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E +R + ++ C L + ++V A++ + G N + LV G+
Sbjct: 225 EAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDM--YMKCGA 282
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +F + + +NT++ + ++ EAL + +EM ++G PD T + A
Sbjct: 283 IDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
A+L L G HG+V + G E + N +I+MY KC K E A +F M K+V SW
Sbjct: 343 SAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSW 402
Query: 201 SAIIAAHASNG-------------------------------LWSECLKLFGEMNNEKCW 229
+++ A NG L+ + ++LF EM E
Sbjct: 403 NSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGI- 461
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+ + ++ + SAC +LGA +L K H + +N ++ + T+L+DM+ +CG + +
Sbjct: 462 KADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQ 521
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M ++ ++ I +AM G G+ A +F++ML +G++PD V++V VL+ACSH G
Sbjct: 522 VFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQ 581
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V +GL F M+ ++ I P ++HYGC+VDL+GRAG+L EA +LI+SMP++ NDVVW SLL
Sbjct: 582 VEQGLHIFSLME-DHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
+A +VH N+E+ AA+ + ++ +VLLSN+YA A +W DVA++R + KG+ +
Sbjct: 641 AACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRK 700
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PG S V+V +++F S D SHP +I M+ +M + G+ PD+S VL DVDE E
Sbjct: 701 VPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQE 760
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K L HS+KLAIAF LI + PIR+ +NLRMC+DCH++ K+ S+IY REIIVRD
Sbjct: 761 KEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNN 820
Query: 590 RFHRFKDGTCSCRDYW 605
RFH F+ G CSC DYW
Sbjct: 821 RFHFFRQGLCSCCDYW 836
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 205/420 (48%), Gaps = 39/420 (9%)
Query: 29 LKEQECLT-ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV-ATCALSHWGSMDYACS 86
+ + CL L+ CK L + K++H + K G P + LV A ++ S+DYA
Sbjct: 22 MTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARK 81
Query: 87 IFRQIDEP-----GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
F E F N+LIRG+ EA+ LY M GV P+++TFP + C
Sbjct: 82 AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
K+ A EG+Q+HG V K+G E D+F+QN LI+ Y +C ++ +F+ M +++V SW+
Sbjct: 142 TKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWT 201
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++I +A E + LF EM E RP +V V+SAC L LD+G+ +
Sbjct: 202 SLICGYARGDRPKEAVSLFFEM-VEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGE 260
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
LN ++ +L+DMY+KCG ++ LF D+ + Y+ ++S A G +EAL+I
Sbjct: 261 LGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAI 320
Query: 322 FSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMK---LEYRIV 367
EML++G PD V + +SA + H ++ GL +D + ++ +
Sbjct: 321 LDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMK 380
Query: 368 PTVQHYGC-VVDLMG---------------RAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
C V DLM R G + A E+ +P ++N V W +++S
Sbjct: 381 CGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP-ERNAVFWNTMISG 439
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 344/617 (55%), Gaps = 44/617 (7%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
+L E ++IL C + K+VHAH+++ G + + L+ Y +
Sbjct: 39 KLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLV 98
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F Q++ P F + +IRG+ + E+ Y M GV P +FTF ALFKAC +
Sbjct: 99 FGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM 158
Query: 148 KEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
G Q+H + GF DL+V NS+I++Y KC + A +F +M ++ V SW+ +I A
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218
Query: 207 HASNGLWSECLKLFGEMNNEK--CW-----------RPEESI-----------------L 236
+A G LF ++ ++ W RP+E++ L
Sbjct: 219 YAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNIS-------ALNVIVETSLIDMYVKCGCLEKGLC 289
V+SAC LGA+ H + IR+I+ + NV+V ++LIDMY KCG ++
Sbjct: 279 AGVISACAQLGAV-----KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK 333
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F +M ++ +YS MI G AMHG+ AL +F +ML+ + P+ V ++G+LSACSHAGL
Sbjct: 334 VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V +G F +M+ + + P+ HY C+VDL+GRAG L EAL+L+++MP++ N VW +LL
Sbjct: 394 VEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALL 453
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
A ++H N +I +IAA LF++ + +Y+LLSN+YA A RW +V+K+R + KG +
Sbjct: 454 GACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKK 513
Query: 470 SPGFSLVEVAR-KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+PG S E +++ F + D +HP I + + Q+ +L+ GY P++ D+ +D
Sbjct: 514 NPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDD 573
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK L HS+KLA+A+ L+ G I+I +N+R+C DCH S I REIIVRD
Sbjct: 574 EKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDN 633
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F +GTCSC ++W
Sbjct: 634 MRFHHFHNGTCSCGNFW 650
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/598 (37%), Positives = 345/598 (57%), Gaps = 16/598 (2%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L+ Q +E + P+ + L + K L + +H + + GF S +
Sbjct: 233 LVLQMQEAGQKPD---SVTLVSILPAVADMKALRIGRSIHGYAFRSGF------ESLVNV 283
Query: 72 TCALSHW----GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
T AL GS A +F+ + +NT+I G + E EEA + +M + G
Sbjct: 284 TNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGE 343
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P T + ACA L L+ G +H + K+ + ++ V NSLI+MY KC++V+ A++
Sbjct: 344 VPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAAS 403
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF +++ +V +W+A+I +A NG E L LF M ++ + + LV V++A
Sbjct: 404 IFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGI-KLDCFTLVGVITALADFS 461
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
K HG +R NV V T+L+DMY KCG ++ LF MM ++ +T++ MI
Sbjct: 462 VNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMID 521
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
G HG GKE L +F+EM + ++P+D+ ++ V+SACSH+G V EGLL F M+ +Y +
Sbjct: 522 GYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLE 581
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
PT+ HY +VDL+GRAG L +A IQ MPI+ V ++L A K+H N+E+GE AA+
Sbjct: 582 PTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQK 641
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
LF+++ +VLL+N+YA W VAK+RT M KGL+++PG S VE+ +++ F S
Sbjct: 642 LFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYS 701
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
+HP IY + + ++K GY PD + DV+ED K++ L HS++LAIAF L
Sbjct: 702 GSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLLSSHSERLAIAFGL 760
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ S G+ + I +NLR+C DCH TK IS++ REIIVRD +RFH FK+G+CSC DYW
Sbjct: 761 LNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/626 (36%), Positives = 345/626 (55%), Gaps = 57/626 (9%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL C K L + K++H++ ++ G F + F + L+ T A GSM+ A +F +
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYA--KCGSMNDAVKVFNVM 320
Query: 92 DEPGAFDFNTLIRGFVKEVEF-----------------------------------EEAL 116
+ +N ++ G+ + F +EAL
Sbjct: 321 EFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEAL 380
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK------------VGFEC 164
+ +M G EP++ T +L ACA L AL +GM+IH + K G
Sbjct: 381 DAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGE 440
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGE 222
DL V N+LI+MY KC + A +IF + +++V +W+ +I +A G ++ LK+F E
Sbjct: 441 DLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSE 500
Query: 223 M-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYV 279
M + P + +L AC HL AL +GK H + R+ V LIDMY
Sbjct: 501 MISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYS 560
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG ++ +F M + +++++ M+SG MHG+GKEAL IF +M + G PDD+ ++
Sbjct: 561 KCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L ACSH+G+V++GL FD M+ +Y +V + +HY CV+DL+ R G L +A + IQ MP++
Sbjct: 621 LLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPME 680
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ V+W +LLSA +VH N+E+ E A L + + + Y L+SN+YA A+RW DVA+IR
Sbjct: 681 PSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIR 740
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M G+ + PG S V+ + F DRSHP IY ++ ++ ++K GY P+ +
Sbjct: 741 QLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETN 800
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
L DVD++EK L HS+KLA+A+ L+ S G PIRI +NLR+C DCH+ IS I
Sbjct: 801 FALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIV 860
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+ EIIVRD RFH FK+G+CSC YW
Sbjct: 861 DHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 201/449 (44%), Gaps = 73/449 (16%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW---------------NPFCASNLVATCALSHW-- 78
++LK C+++ +++H ++ G + + + + T ++ +
Sbjct: 36 SLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASYLA 95
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G+ A S+ ++ A +N L+R +KE + A+ + M G +PD+FT P
Sbjct: 96 CGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYA 155
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS- 196
KAC +L + G +HG + GFE ++FV N+L+ MY +C +E AS +F ++ +K
Sbjct: 156 LKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI 215
Query: 197 --VASWSAIIAAHASNGLWSECLKLFGEMN---NEKCWRPEESI--LVSVLSACTHLGAL 249
V SW++I+AAH L+LF EM+ +EK I +V++L AC L AL
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK------------ 297
K H IRN + + V +LID Y KCG + + +F +M K
Sbjct: 276 PQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGY 335
Query: 298 -----------------------CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+T+S +I+G A G +EAL F +M+ +G EP+
Sbjct: 336 TQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNS 395
Query: 335 VVYVGVLSACSHAGLVNEG-----------LLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
V + +LSAC+ G +++G LL D + Y ++D+ +
Sbjct: 396 VTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKC 455
Query: 384 GMLGEALELIQSMPIQQNDVV-WRSLLSA 411
A + S+P ++ +VV W ++
Sbjct: 456 RSFKAARSIFDSIPRRERNVVTWTVMIGG 484
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 335/574 (58%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEE----FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L+ C +L + +++H H LK G + F A+ L+ + S G M+ A +F+
Sbjct: 1010 SVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKS--GKMEEAEFLFQNK 1067
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D+ +N ++ G++ + ++AL L++ + + G + D T KAC L L +G
Sbjct: 1068 DDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGK 1127
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH H K GF+ DL V + +++MY KC + A +F + +W+++I+ NG
Sbjct: 1128 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 1187
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ L+++ M + P+E +++ A + + AL+ G+ H ++I+ + V
Sbjct: 1188 NEDQALRIYHRMRQSRVM-PDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG 1246
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
TSL+DMY KCG +E LF+ M + ++ M+ GLA HG +EA+++F M G+E
Sbjct: 1247 TSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE 1306
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V ++G+LSACSHAGL +E M +Y I P ++HY C+VD +GRAG++ EA +
Sbjct: 1307 PDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 1366
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I++MP + + + R+LL A ++ ++E G+ A LF + + YVLLSN+YA A R
Sbjct: 1367 VIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANR 1426
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV R M K + + PGFS ++V ++ FV DRSHP D IY+ + +M ++
Sbjct: 1427 WDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRE 1486
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
+GY PD VL DV+++EK L HS+KLAIA+ LI + IR+ +NLR+C DCH
Sbjct: 1487 DGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNA 1546
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS ++EREI++RD RFH F+DG CSC DYW
Sbjct: 1547 IKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 193/403 (47%), Gaps = 12/403 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + +LE K+VH +K G + A++LV S G +A +F +
Sbjct: 911 LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNM--YSKMGCAYFAREVFNDMKHL 968
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEGMQI 153
+N++I + EE++ L+ ++ G++PD+FT ++ +AC+ L L QI
Sbjct: 969 DLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQI 1028
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H H K G D FV +LI++Y K K+E A +F+ D +A W+A++ +
Sbjct: 1029 HVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG 1088
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L+LF + ++ + ++ L + AC L LD GK H I+ ++ V +
Sbjct: 1089 KKALELF-SLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSG 1147
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
++DMY+KCG + +F ++ + ++ MISG +G +AL I+ M + + PD
Sbjct: 1148 ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 1207
Query: 334 DVVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + ++ A S + +G L + +KL+ P V +VD+ + G + +A L
Sbjct: 1208 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRL 1265
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+ M + +N +W ++L H N E A NLF+ H
Sbjct: 1266 FKKMNV-RNIALWNAMLVGLAQHGNAE----EAVNLFKSMKSH 1303
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L + L G H + G D F+ N+L+ MY KC + A +F ++
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 197 VASWSAIIAAHAS-----NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ +W+AI+ A+A+ +G E L LF + L VL C + G L
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
+ HG I+ +V V +L+++Y KCG + LF M ++ + +++M+ G
Sbjct: 746 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
G KEA +FSE R GL PD+ +L+ S
Sbjct: 806 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 139/312 (44%), Gaps = 31/312 (9%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C N L + VH + +K G W+ F + LV S G M A +F + E
Sbjct: 733 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNI--YSKCGRMRDARLLFDWMRE 790
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N +++G+V+ +EA L++E G+ PD F+ + +++ EG +
Sbjct: 791 RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWL 849
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
V + L N + + K + + ++ + +W AI
Sbjct: 850 ADQVQAYAAKLSLSDDNPDVFCWNK----KLSECLW------AGDNWGAI---------- 889
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
EC F MN ++LV VL+A L+LGK HG +++ +V V S
Sbjct: 890 -EC---FVNMNGLNIDYDAVTLLV-VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANS 944
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L++MY K GC +F M ++++ MIS A +E++++F ++L EGL+PD
Sbjct: 945 LVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPD 1004
Query: 334 DVVYVGVLSACS 345
VL ACS
Sbjct: 1005 HFTLASVLRACS 1016
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 8/212 (3%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+ NL K HA ++ G + F ++NL+ S GS+ A +F E +
Sbjct: 633 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTM--YSKCGSLSSARQVFDTTPERDLVTW 690
Query: 100 NTLIRGFVKEVE-----FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
N ++ + V+ +E L L+ + T + K C L +H
Sbjct: 691 NAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVH 750
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G+ K+G E D+FV +L+N+Y KC ++ A +F M ++ V W+ ++ + GL
Sbjct: 751 GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEK 810
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
E +LF E + RP+E + +L+ + +
Sbjct: 811 EAFQLFSEFHRSGL-RPDEFSVQLILNGVSEV 841
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/564 (38%), Positives = 336/564 (59%), Gaps = 9/564 (1%)
Query: 48 KKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
+++H ++ G F +PF AS L+ +H A F +I P + G+
Sbjct: 109 RQLHLLAIRSGLFPSDPFSASALLHM--YNHCSRPIDARKAFDEIPSPNPVIITAMASGY 166
Query: 107 VKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V+ +L L+ ++ G D F A A++ +H V K G +
Sbjct: 167 VRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226
Query: 165 DLFVQNSLINMYGKCEKVEFASA--IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
D V N++++ Y K + + +A +F M +K V SW+++IA +A NG+ ++ L L+ +
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRK 285
Query: 223 M-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M N + L ++L AC H G + GKC H ++R NV V TS++DMY KC
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKC 345
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E F+ + +K L++S MI+G MHG G+EAL IF+EM R G P+ + ++ VL
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+ACSHAGL+++G ++ MK + I P V+HYGC+VDL+GRAG L EA LI+ M ++ +
Sbjct: 406 AACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 465
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W +LLSA ++H N+E+ EI+AK LF++++ + YVLLSN+YA A W DV ++R
Sbjct: 466 AAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVL 525
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
+ ++G+ + PG+S VE+ + + F D+SHP IY + ++ +++ GY P+ V
Sbjct: 526 VKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSV 585
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L D+DE+EK L HS+KLAIAFAL++ GS I + +NLR+C DCHT KLI+ I +R
Sbjct: 586 LHDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQR 645
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRD +RFH FKDG+CSC DYW
Sbjct: 646 EIIVRDLQRFHHFKDGSCSCGDYW 669
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 144/328 (43%), Gaps = 26/328 (7%)
Query: 150 GMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q+H + G F D F ++L++MY C + A F ++ + +A+ + +
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 209 SNGLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
N L L LF ++ + +E+ + SA + + H +++ +
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227
Query: 268 VIVETSLIDMYVKCGCLEKGLC--LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
V +++D Y K G + G +F M +K ++++ MI+ A +G +AL ++ +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTM-EKDVVSWNSMIALYAQNGMSADALGLYRKM 286
Query: 326 LR--EGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLM 380
L ++ + V +L AC+HAG + G + RM LE + VVD+
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTS----VVDMY 342
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH-HNLEIGEIAAKNLFQINSHHPSDY 439
+ G + A + Q + ++N + W ++++ +H H E +I N + +P+
Sbjct: 343 SKCGRVEMARKAFQKIK-EKNILSWSAMITGYGMHGHGQEALDIF--NEMCRSGQNPNYI 399
Query: 440 VLLSNMYA--------RAQRWYDVAKIR 459
+S + A + + WY+ K R
Sbjct: 400 TFISVLAACSHAGLLDKGRYWYNAMKKR 427
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 336/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C + + K+H+ ++K G+ + F ++L++ + D A +F I +
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD--NFDDALKVFDDIPD 177
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +I G++ F EA+ + ++ E G++PD+F+ + ACA+L G I
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
++ G ++FV SL++MY KC +E A+ IF M +K + SWS +I +A NGL
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L LF +M +E +P+ +V VLSAC LGALDLG + RN N ++ T+
Sbjct: 298 QQALDLFFQMQSENL-KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA 356
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + + +F M K ++ ++ M+ GL+M+G K S+FS + + G+ PD
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++G+L C+H G VNEG F+ MK + + P+++HYGC+VDL+GRAG+L EA +LI
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+MP++ N VVW +LL K+H + + E K L ++ + +YV LSN+Y+ RW
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWE 536
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ KIR+ M + + + S +E+ V++F+ D+SH + IY + ++ +LK G
Sbjct: 537 EAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P VL D++E+EK L HS+KLA+AF LI IR+ +NLR+C DCH K
Sbjct: 597 HVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIK 656
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I +REII+RD RFH F DG+CSCRDYW
Sbjct: 657 LISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 224/404 (55%), Gaps = 23/404 (5%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
+LT P P L ++ L + K +HA +L+ + + NL+
Sbjct: 3 ILTNPSSPVFSKALEIKNYLSNGLNFF------NQLKHIHARLLRLHLDQDNYLL-NLIL 55
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
CAL +GS +Y+ +F Q+ EP F +NT+IRG V + F++A+ LY M G P+N
Sbjct: 56 CCALD-FGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNN 114
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
FT P + KACA+ ++ G++IH + K G++ D+FV+ SL+++Y KC+ + A +F
Sbjct: 115 FTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDD 174
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ K+V SW+AII + S+G + E + F ++ E +P+ LV VL+AC L
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKL-LEMGLKPDSFSLVKVLAACAR-----L 228
Query: 252 GKCTHGSLI-RNIS----ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
G CT G I R IS NV V TSL+DMYVKCG LE+ +F M +K +++S MI
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYR 365
G A +G ++AL +F +M E L+PD VGVLSAC+ G ++ G+ M + E+
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFL 348
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G + +A E+ +M +++ VVW +++
Sbjct: 349 SNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-KKDRVVWNAMM 389
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 333/561 (59%), Gaps = 9/561 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+++H+ ++K + F + LV + C L ++ A F + E +N +I
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDL-----LEDARMAFNLLPEKDLIAWNAIIS 406
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+ + E EAL L+ EM + G+ + T + K+ A LQ + Q+HG K GF
Sbjct: 407 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 466
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D++V NSLI+ YGKC VE A IF++ + S++++I A+A G E LKLF EM
Sbjct: 467 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 526
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + +P+ + S+L+AC +L A + GK H +++ L++ SL++MY KCG +
Sbjct: 527 DMEL-KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSI 585
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ F + ++ +++S MI GLA HG G++AL +F++ML+EG+ P+ + V VL AC
Sbjct: 586 DDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 645
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+HAGLV E L F+ M+ + P +HY C++DL+GRAG + EA+EL+ MP + N V
Sbjct: 646 NHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASV 705
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W +LL A+++H ++E+G AA+ LF + +VLL+N+YA A +W +VA++R M
Sbjct: 706 WGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRD 765
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+ + PG S +EV KVY F+ DRSH IY + ++ + GY P + L D
Sbjct: 766 SKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHD 825
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
V++ EK L HS+KLA+AF LI QG+PIR+ +NLR+C DCHT K I I REII
Sbjct: 826 VEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREII 885
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRD RFH FKDG+CSC DYW
Sbjct: 886 VRDINRFHHFKDGSCSCGDYW 906
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 11/327 (3%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
T K+L ++HAH+ K G +P ++L+ S YA + + EP +
Sbjct: 68 TTKSLRPGLQIHAHITKSGLSDDPSIRNHLINL--YSKCRXFGYARKLVDESSEPDLVSW 125
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
+ LI G+ + AL ++EM GV+ + FTF ++ KAC+ ++ L+ G Q+HG V
Sbjct: 126 SALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVV 185
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
GFE D+FV N+L+ MY KC++ + +F ++ +++V SW+A+ + + E + L
Sbjct: 186 SGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGL 245
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F EM +P E L S+++ACT L GK HG LI+ + +L+DMY
Sbjct: 246 FYEMVLSGI-KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYA 304
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE--------GLE 331
K G L + +F + ++++ +I+G +H ++AL + +M R+ +E
Sbjct: 305 KVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDME 364
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFD 358
D V VG++ S L+ + + F+
Sbjct: 365 SDLFVSVGLVDMYSKCDLLEDARMAFN 391
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 150/299 (50%), Gaps = 19/299 (6%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P + ++ L C ++L+ G+QIH H+ K G D ++N LIN+Y KC +A +
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCWRPEESILVSVLSACTHL 246
+ + + SWSA+I+ +A NGL L F EM+ KC E SVL AC+ +
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKC---NEFTFSSVLKACSIV 170
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
L +GK HG ++ + +V V +L+ MY KC LF + ++ ++++ +
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC-----SHAGLVNEGLLCFDRMK 361
S EA+ +F EM+ G++P++ +++AC S G + G L +K
Sbjct: 231 SCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL----IK 286
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLE 419
L Y P + +VD+ + G L +A+ + + I+Q D+V W ++++ +H + E
Sbjct: 287 LGYDWDPFSAN--ALVDMYAKVGDLADAISVFEK--IKQPDIVSWNAVIAGCVLHEHHE 341
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 7/188 (3%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
++ L+ C ++L C NL F K++H H+LK+GF + F ++LV A GS
Sbjct: 527 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYA--KCGS 584
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A F ++ E G ++ +I G + +AL L+N+M + GV P++ T ++ A
Sbjct: 585 IDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGA 644
Query: 141 CAKLQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C + E + ++ GF+ +I++ G+ K+ A + +M ++ AS
Sbjct: 645 CNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANAS 704
Query: 200 -WSAIIAA 206
W A++ A
Sbjct: 705 VWGALLGA 712
>gi|357125571|ref|XP_003564466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 600
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/599 (37%), Positives = 340/599 (56%), Gaps = 16/599 (2%)
Query: 18 EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF----FWNPFCASNLVATC 73
P L L E +++++ C L + HAH L+ +
Sbjct: 7 RPHDAASLPRHLLEARVVSLVRRCPGLRALRGAHAHFLRLRLPRLTYAFALSKLLASCAA 66
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEF-----EEALFLYNEMFERGVE 128
A + + YA ++F QI EP AF +N+LIR + LY M G
Sbjct: 67 ASATTVASSYARALFDQIPEPTAFCYNSLIRAVSGSGSSSNSGTTDTFLLYRRMLHAGSP 126
Query: 129 -PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P++FT + KAC AL EG Q+H F G E +VQ L+N+Y +CE+V A
Sbjct: 127 APNSFTLAFVLKACT---ALGEGQQLHAQAFGHGLEPSPYVQTGLLNLYARCEEVALARN 183
Query: 188 IFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F M + K++ +WS++I ++ G+ +E L LF +M P+E +VSV+SAC
Sbjct: 184 VFDGMVEDKNLVAWSSMIGGYSRMGMVNEALGLFRDMQAVGV-NPDEVTMVSVISACAKA 242
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
GALDLGK H + R +++ + T+LIDMY KCG +E+ +F M ++ +S MI
Sbjct: 243 GALDLGKWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKSVFDSMVERDTKAWSAMI 302
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
GLAMHG ++AL +FS ML+ + P++V +VGVLSAC+H+GLV++G + M+ E I
Sbjct: 303 VGLAMHGLAEDALGLFSRMLQLKVRPNNVTFVGVLSACAHSGLVDDGRRYWCTMQ-ELGI 361
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
++++YGC+VDL+ R+G+L EA + MPI N V+WR+LL ASK + ++I E+A++
Sbjct: 362 EASMENYGCMVDLLCRSGLLDEAFSFVTGMPISPNSVIWRNLLVASKSSNRIDIVELASR 421
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
LF++ +P +YVLLSN+YA +W V +R +M + G S +E+ ++KFV
Sbjct: 422 RLFELEPQNPENYVLLSNLYALNSQWDRVRYMRKKMKDNNVTVVAGCSSIEINGYLHKFV 481
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
D SHP I ++ ++ ++ G+ P + VL DV E+EK L HS++LAIA+
Sbjct: 482 VSDGSHPEIKKIRLVLREIADRVLCAGHKPWTAAVLHDVVEEEKEVALCEHSERLAIAYG 541
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L+ IR+ +NLR C DCH TK+IS Y REIIVRDR RFHRF G+CSC D+W
Sbjct: 542 LLKTKAPHVIRVVKNLRFCPDCHEVTKIISKSYGREIIVRDRVRFHRFIGGSCSCNDFW 600
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 346/585 (59%), Gaps = 6/585 (1%)
Query: 24 ELNLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E +R+ E L +L C L K++H + + GF + A+ VA A + S
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVA--AYAKCSS 451
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +F ++ +N LI + ++L L+ M + G++PD FT +L A
Sbjct: 452 LDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLA 511
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA+L+ L+ G +IHG + + G E D F+ SL+++Y +C + IF +M+ KS+ W
Sbjct: 512 CARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCW 571
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+ +I + N L E L F +M + +P+E + VL AC+ + AL LGK H +
Sbjct: 572 NVMITGFSQNELPCEALDTFRQMLSGGI-KPQEIAVTGVLGACSQVSALRLGKEVHSFAL 630
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ + + V +LIDMY KCGC+E+ +F + +K + ++V+I+G +HG G +A+
Sbjct: 631 KAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIE 690
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M +G PD ++GVL AC+HAGLV EGL +M+ Y + P ++HY CVVD++
Sbjct: 691 LFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDML 750
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG L EAL+L+ MP + + +W SLLS+ + + +LEIGE +K L ++ + +YV
Sbjct: 751 GRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYV 810
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA +W +V K+R M GL++ G S +E+ VY+F+ D S I +
Sbjct: 811 LLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQ 870
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
++E ++ GY PD S VL +++E+ K + LK HS+KLAI+F L++ ++G+ +R+ +
Sbjct: 871 TWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCK 930
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH KL+S + +R+IIVRD KRFH FK+G C+C D+W
Sbjct: 931 NLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 160/316 (50%), Gaps = 8/316 (2%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L+ C KN+ +KVHA V N S + S GS + +F E
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRI-IAMYSACGSPSDSRGVFDAAKE 156
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQ 152
F +N L+ G+ + F +A+ L+ E+ + PDNFT P + KACA + ++ G
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K G D FV N+LI MYGKC VE A +F+ M +++ SW++++ A + NG
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 213 WSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ EC +F + + E+ P+ + +V+V+ AC +G + +G HG + V V
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EG 329
SL+DMY KCG L + LF M K ++++ +I G + G + + EM R E
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396
Query: 330 LEPDDVVYVGVLSACS 345
+ ++V + VL ACS
Sbjct: 397 VRVNEVTVLNVLPACS 412
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 5/306 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
++E + VHA LK G F + F + L+A G ++ A +F + +N++
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAM--YGKCGFVESAVKVFETMRNRNLVSWNSV 267
Query: 103 IRGFVKEVEFEEALFLYNEMF---ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
+ + F E ++ + E G+ PD T + ACA + ++ GM +HG FK
Sbjct: 268 MYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFK 327
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+G ++ V NSL++MY KC + A A+F K+V SW+ II ++ G + +L
Sbjct: 328 LGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFEL 387
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
EM E+ R E +++VL AC+ L K HG R+ + +V + + Y
Sbjct: 388 LQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYA 447
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KC L+ +F M K +++ +I A +G ++L +F M+ G++PD
Sbjct: 448 KCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGS 507
Query: 340 VLSACS 345
+L AC+
Sbjct: 508 LLLACA 513
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L +AC + + G ++H V D+ + +I MY C + +F +K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ ++A+++ ++ N L+ + + LF E+ + P+ L V AC + ++LG+
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H ++ + V +LI MY KCG +E + +F M ++ ++++ ++ + +G
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 316 KEALSIFSEML---REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
E +F +L EGL PD V V+ AC+ G V G++ + + I V
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHG-LAFKLGITEEVTV 336
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+VD+ + G LGEA L M +N V W +++
Sbjct: 337 NNSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTII 372
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 343/617 (55%), Gaps = 44/617 (7%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
+L E ++IL C + K+VHAH+++ G + + L+ Y +
Sbjct: 39 KLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLV 98
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F Q++ P F + +IRG+ + E+ Y M GV P +FTF ALFKAC +
Sbjct: 99 FGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNM 158
Query: 148 KEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
G Q+H + GF DL+V NS+I++Y KC + A +F +M ++ V SW+ +I A
Sbjct: 159 DLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218
Query: 207 HASNGLWSECLKLFGE--MNNEKCW-----------RPEESI-----------------L 236
+A G LF + + + W RP+E++ L
Sbjct: 219 YAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTL 278
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNIS-------ALNVIVETSLIDMYVKCGCLEKGLC 289
V+SAC LGA+ H + IR+I+ + NV+V ++LIDMY KCG ++
Sbjct: 279 AGVISACAQLGAV-----KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYK 333
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F +M ++ +YS MI G AMHG+ AL +F +ML+ + P+ V ++G+LSACSHAGL
Sbjct: 334 VFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V +G F +M+ + + P+ HY C+VDL+GRAG L EAL+L+++MP++ N VW +LL
Sbjct: 394 VEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALL 453
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
A ++H N +I +IAA LF++ + +Y+LLSN+YA A RW +V+K+R + KG +
Sbjct: 454 GACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKK 513
Query: 470 SPGFSLVEVAR-KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+PG S E +++ F + D +HP I + + Q+ +L+ GY P++ D+ +D
Sbjct: 514 NPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDD 573
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK L HS+KLA+A+ L+ G I+I +N+R+C DCH S I REIIVRD
Sbjct: 574 EKERILMSHSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDN 633
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F +GTCSC ++W
Sbjct: 634 MRFHHFHNGTCSCGNFW 650
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 336/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C + + K+H+ ++K G+ + F ++L++ + D A +F I +
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD--NFDDALKVFDDIPD 177
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +I G++ F EA+ + ++ E G++PD+F+ + ACA+L G I
Sbjct: 178 KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWI 237
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
++ G ++FV SL++MY KC +E A+ IF M +K + SWS +I +A NGL
Sbjct: 238 DRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLP 297
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L LF +M +E +P+ +V VLSAC LGALDLG + RN N ++ T+
Sbjct: 298 QQALDLFFQMQSENL-KPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTA 356
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + + +F M K ++ ++ M+ GL+M+G K S+FS + + G+ PD
Sbjct: 357 LIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPD 416
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++G+L C+H G VNEG F+ MK + + P+++HYGC+VDL+GRAG+L EA +LI
Sbjct: 417 ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+MP++ N VVW +LL K+H + + E K L ++ + +YV LSN+Y+ RW
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWE 536
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ KIR+ M + + + S +E+ V++F+ D+SH + IY + ++ +LK G
Sbjct: 537 EAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P VL D++E+EK L HS+KLA+AF LI IR+ +NLR+C DCH K
Sbjct: 597 HVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIK 656
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I +REII+RD RFH F DG+CSCRDYW
Sbjct: 657 LISKITKREIIIRDTNRFHTFIDGSCSCRDYW 688
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/404 (34%), Positives = 224/404 (55%), Gaps = 23/404 (5%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
+LT P P L ++ L + K +HA +L+ + + NL+
Sbjct: 3 ILTSPTSPVFSKALEIKNYLSNGLNFF------NQLKHIHARLLRLHLDQDNYLL-NLIL 55
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
CAL +GS +Y+ +F Q+ EP F +NT+IRG V + F++A+ LY M G P+N
Sbjct: 56 CCALD-FGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNN 114
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
FT P + KACA+ ++ G++IH + K G++ D+FV+ SL+++Y KC+ + A +F
Sbjct: 115 FTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDD 174
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ K+V SW+AII + S+G + E + F ++ E +P+ LV VL+AC L
Sbjct: 175 IPDKNVVSWTAIITGYISSGHFREAIGAFKKL-LEMGLKPDSFSLVKVLAACAR-----L 228
Query: 252 GKCTHGSLI-RNIS----ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
G CT G I R IS NV V TSL+DMYVKCG LE+ +F M +K +++S MI
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYR 365
G A +G ++AL +F +M E L+PD VGVLSAC+ G ++ G+ M + E+
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFL 348
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G + +A E+ +M +++ VVW +++
Sbjct: 349 SNPVLG--TALIDMYSKCGSVTQAWEIFTAMK-RKDRVVWNAMM 389
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/600 (36%), Positives = 340/600 (56%), Gaps = 37/600 (6%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
C ++ E K+ H+ +L+ G N S + C+LS G ++YA +F + P F +
Sbjct: 11 ACSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLY 70
Query: 100 NTLIRGFVKEVEFEE-ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
NTL + F + +L Y+ M + V P+ FTFP+L +AC KL+ +E Q+H HV
Sbjct: 71 NTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFTFPSLIRAC-KLE--EEAKQLHAHVL 127
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL------ 212
K GF D + N+LI++Y ++ A +F M +V SW+++++ ++ GL
Sbjct: 128 KFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYSQWGLVDEAFR 187
Query: 213 -------------WS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
W+ E LF M EK + + ++LSACT +
Sbjct: 188 VFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGV 247
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
GAL+ G H + + L+ + T++IDMY KCGCL+K +F + K +++ MI
Sbjct: 248 GALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMI 307
Query: 307 SGLAMHGQGKEALSIFSEMLREGL-EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
G AMHG+G++A+ +F EM E + PD + +V VL+AC+H+GLV EG F M +
Sbjct: 308 GGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHG 367
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAA 425
I PT +HYGC+VDL+ RAG L EA ++I MP+ + V +LL A ++H NLE+GE
Sbjct: 368 IDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVG 427
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
+ +++ + YV+L NMYA +W VA +R M +G+ + PGFS++E+ V +F
Sbjct: 428 NRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEF 487
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
V+ R HP + IY I++M ++ G+ PD VL D+ E+E+ L HS+KLAIA+
Sbjct: 488 VAGGRDHPLAEAIYAKIYEMLESIRVVGFVPDTDGVLHDLVEEERENPLFYHSEKLAIAY 547
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L+ +G +R+ +NLR+C DCH +K+IS +Y+ +II+RDR RFH F +G CSC+DYW
Sbjct: 548 GLLKTKRGETLRVTKNLRVCKDCHQASKMISKVYDCDIIIRDRSRFHHFSNGECSCKDYW 607
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 153/354 (43%), Gaps = 74/354 (20%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT--------------CAL------ 75
++++ CK EE K++HAHVLK+GF + + +NL+ C +
Sbjct: 108 SLIRACKLEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVV 167
Query: 76 ---------SHWGSMDYACSIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FE 124
S WG +D A +F + + + +N +I FVK F EA L+ M E
Sbjct: 168 SWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVE 227
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ +E D F + AC + AL++GM IH +V K G D + ++I+MY KC ++
Sbjct: 228 KKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDK 287
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F + K V+SW+ +I A +G + ++LF EM E P+ V+VL+AC
Sbjct: 288 AFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACA 347
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-----DKCQ 299
H G +E+G FR M D +
Sbjct: 348 H-----------------------------------SGLVEEGWYYFRYMVDVHGIDPTK 372
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
Y M+ LA G+ +EA + EM + PD V +L AC G + G
Sbjct: 373 EHYGCMVDLLARAGRLEEAKKVIDEM---PMSPDAAVLGALLGACRIHGNLELG 423
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/551 (40%), Positives = 321/551 (58%), Gaps = 43/551 (7%)
Query: 96 AFDFNTLIRGFVK-----EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+F +NTLIR V+ + ++ M GV+PD TFP L ++ A L G
Sbjct: 24 SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLG 83
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+H + + G D FVQ SLI+MY C + FA +F ++ Q + SW++II A+
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQA 143
Query: 211 GL------------------WS-------------ECLKLFGEMN----NEKCWRPEESI 235
GL WS E L LF EM N+ RP E
Sbjct: 144 GLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDV--RPNEFT 201
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+ VL+AC LGAL+ GK H + + ++V++ T+LIDMY KCG +EK +F +
Sbjct: 202 MSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG 261
Query: 296 -DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+K + +S MISGLAMHG +E + +FS+M+ +G+ P+ V ++ V AC H GLV+EG
Sbjct: 262 PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGK 321
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
RM +Y I+PT+QHYGC+VDL GRAG + EA +++SMP++ + +VW +LLS S++
Sbjct: 322 DYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRM 381
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H ++E E+A K L ++ + YVLLSN+YA+ RW DV +R M + G+ + PG S
Sbjct: 382 HGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCS 441
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
L+EV +++F D SHP I+ M+ ++ +LK EGY + +VL D+DE+ K L
Sbjct: 442 LIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDLDEEGKELAL 501
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+KLA+A+ + S G+PIRI +NLR+C DCH K+IS +++REIIVRD RFH F
Sbjct: 502 SLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKVFDREIIVRDCNRFHHF 561
Query: 595 KDGTCSCRDYW 605
G CSCRDYW
Sbjct: 562 TQGLCSCRDYW 572
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 36/302 (11%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVA---TCA----------------LSHWGSM------- 81
+ VHA +L++G +PF ++L++ +C L W S+
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQA 143
Query: 82 ---DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG---VEPDNFTFP 135
D A ++F + E ++ +I G+V+ +++EAL L+ EM G V P+ FT
Sbjct: 144 GLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMS 203
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQ 194
+ AC +L AL+ G H ++ K G D+ + +LI+MY KC VE A+ +F +
Sbjct: 204 GVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPN 263
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
K V +WSA+I+ A +GL EC+ LF +M N+ RP ++V AC H G + GK
Sbjct: 264 KDVMAWSAMISGLAMHGLAEECVGLFSKMINQGV-RPNAVTFLAVFCACVHGGLVSEGKD 322
Query: 255 THGSLIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMH 312
+ + S + I ++D+Y + G +++ + + M + L + ++SG MH
Sbjct: 323 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 382
Query: 313 GQ 314
G
Sbjct: 383 GD 384
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/574 (38%), Positives = 338/574 (58%), Gaps = 9/574 (1%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + VHA V + GF + F + L+A A + A ++F +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR--RLGSARTVFEGLPL 182
Query: 94 P--GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P + ++ + + E EAL +++ M + V+PD ++ A LQ LK+G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH V K+G E + + SL MY KC +V A +F +M ++ W+A+I+ +A NG
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + +F EM N+ RP+ + S +SAC +G+L+ + + + R+ +V +
Sbjct: 303 YAREAIDMFHEMINKDV-RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++LIDM+ KCG +E +F D+ + +S MI G +HG+ +EA+S++ M R G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+DV ++G+L AC+H+G+V EG F+ M +++I P QHY CV+DL+GRAG L +A E
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I+ MP+Q VW +LLSA K H ++E+GE AA+ LF I+ + YV LSN+YA A+
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA++R M KGLN+ G S VEV ++ F D+SHP ++ I + +E +LK
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ + L D++++E E L HS+++AIA+ LI QG+P+RI +NLR C +CH
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS + +REI+VRD RFH FKDG CSC DYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 220/415 (53%), Gaps = 10/415 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+++ + + + K++HA +L G ++ F + L+ A S +G + +A +F + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +N +IRG+ + F++AL +Y+ M V PD+FTFP L KAC+ L L+ G +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWSAIIAAHASNGLW 213
VF++GF+ D+FVQN LI +Y KC ++ A +F+ + ++++ SW+AI++A+A NG
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L++F M +P+ LVSVL+A T L L G+ H S+++ + + S
Sbjct: 204 MEALEIFSHMRKMDV-KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L MY KCG + LF M + ++ MISG A +G +EA+ +F EM+ + + PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ +SAC+ G + + ++ + + +YR V ++D+ + G + E L
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYR--DDVFISSALIDMFAKCGSV-EGARL 379
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ + ++ VVW +++ +H I+ + HP+D L + A
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAR-EAISLYRAMERGGVHPNDVTFLGLLMA 433
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/573 (37%), Positives = 327/573 (57%), Gaps = 6/573 (1%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L CKN LE K++H + + G + + L+ GS+ A ++F +
Sbjct: 537 SVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINM--YIRCGSLQDARNVFHSLQ 594
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G + E +A+ L+ +M G P TF ++ K C L EG +
Sbjct: 595 HRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKK 654
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+ ++ G+E D V N+LI+ Y K + A +F +M + + SW+ IIA +A NGL
Sbjct: 655 VIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGL 714
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ +M E+ P + VS+L+AC+ AL+ GK H +++ +V V
Sbjct: 715 GQTAVEFAYQMQ-EQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGA 773
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI MY KCG + +F + +K +T++ MI+ A HG +AL F+ M +EG++P
Sbjct: 774 ALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKP 833
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +LSAC+HAGLV EG F M+ EY ++PT++HYGC+V L+GRA EA L
Sbjct: 834 DGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETL 893
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I MP + VW +LL A ++H N+ + E AA N ++N+ +P+ Y+LLSN+YA A RW
Sbjct: 894 INQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRW 953
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DVAKIR M +G+ + PG S +EV +++F++ DRSHP IY + ++ +++
Sbjct: 954 DDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEA 1013
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD VL D+ + + L HS++LAIA+ LI G+PIRI +NLR+C DCHT +
Sbjct: 1014 GYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTAS 1073
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + REII RD RFH FK+G CSC DYW
Sbjct: 1074 KFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 237/497 (47%), Gaps = 23/497 (4%)
Query: 29 LKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L L+IL C K LE K +H+H+ + G + + L++ A G + A
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA--RCGDLPKAR 385
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F + + +N +I G+ + + EA+ LY +M GV+P TF L ACA
Sbjct: 386 ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
A +G IH + + G + + + N+L+NMY +C + A +F+ + V SW+++IA
Sbjct: 446 AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
HA +G + KLF EM NE+ P+ SVLS C + AL+LGK HG + +
Sbjct: 506 GHAQHGSYETAYKLFQEMQNEE-LEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQ 564
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
L+V + +LI+MY++CG L+ +F + + ++++ MI G A G+ +A+ +F +M
Sbjct: 565 LDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQM 624
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAG 384
EG P + +L C+ + ++EG + Y + V + ++ ++G
Sbjct: 625 QNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSG 682
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH--PSDYVLL 442
+ +A E+ MP ++ V W +++ + +G+ A + +Q+ P+ + +
Sbjct: 683 SMTDAREVFDKMP-SRDIVSWNKIIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFV 738
Query: 443 S--NMYARAQRWYDVAKIRTEMASKGL--NQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
S N + + ++ E+ + L + G +L+ + K SQ + +DNI
Sbjct: 739 SLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKC---GSQGEAQEVFDNI 795
Query: 499 YEMIHQMEWQLKFEGYS 515
E + + W Y+
Sbjct: 796 IEK-NVVTWNAMINAYA 811
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 194/387 (50%), Gaps = 14/387 (3%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIF 88
L +L C N + K +H +L+ G N A+ N+ C GS+ A ++F
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC-----GSLMEAQNVF 489
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+N++I G + +E A L+ EM +EPDN TF ++ C +AL+
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G QIHG + + G + D+ + N+LINMY +C ++ A +F + + V SW+A+I A
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + ++LF +M NE +RP +S S+L CT LD GK ++ + L+
Sbjct: 610 DQGEDMKAIELFWQMQNEG-FRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDT 668
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +LI Y K G + +F M + ++++ +I+G A +G G+ A+ +M +
Sbjct: 669 GVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQ 728
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+ P+ +V +L+ACS + EG + ++ ++ V+ ++ + + G GE
Sbjct: 729 DVVPNKFSFVSLLNACSSFSALEEGKRVHAEI-VKRKLQGDVRVGAALISMYAKCGSQGE 787
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A E+ ++ I++N V W ++++A H
Sbjct: 788 AQEVFDNI-IEKNVVTWNAMINAYAQH 813
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 193/380 (50%), Gaps = 8/380 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L+ C L E K++HA +++ + F SNL+ + +D A +F+++
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFL-SNLLINMYVKCRSVLD-AHQVFKEM 88
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N+LI + ++ ++A L+ EM G P+ T+ ++ AC L+ G
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH + K G++ D VQNSL++MYGKC + A +F + + V S++ ++ +A
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
ECL LFG+M++E P++ +++L A T LD GK H + ++ V
Sbjct: 209 YVKECLGLFGQMSSEGI-SPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+ M V+CG ++ F+ AD+ + Y+ +I+ LA HG EA + M +G+
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+ Y+ +L+ACS + + G L + E VQ ++ + R G L +A E
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHIS-EDGHSSDVQIGNALISMYARCGDLPKARE 386
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
L +MP +++ + W ++++
Sbjct: 387 LFYTMP-KRDLISWNAIIAG 405
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 7/378 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L T L+E K++H ++ G + + LV C G +D A F+ +
Sbjct: 236 LDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCV--RCGDVDSAKQAFKGTADR 293
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N LI + EA Y M GV + T+ ++ AC+ +AL+ G IH
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ + G D+ + N+LI+MY +C + A +F M ++ + SW+AIIA +A
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRG 413
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E ++L+ +M +E +P + +LSAC + A GK H ++R+ N + +L
Sbjct: 414 EAMRLYKQMQSEGV-KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
++MY +CG L + +F + ++++ MI+G A HG + A +F EM E LEPD+
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ + VLS C + + G R+ E + V ++++ R G L +A +
Sbjct: 533 ITFASVLSGCKNPEALELGKQIHGRIT-ESGLQLDVNLGNALINMYIRCGSLQDARNVFH 591
Query: 395 SMPIQQNDVV-WRSLLSA 411
S+ Q DV+ W +++
Sbjct: 592 SL--QHRDVMSWTAMIGG 607
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 155/296 (52%), Gaps = 4/296 (1%)
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
R E + T+ AL + C + + L E +IH + + D+F+ N LINMY KC V
Sbjct: 21 RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +FK+M ++ V SW+++I+ +A G + +LF EM N + P + +S+L+AC
Sbjct: 81 AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG-FIPNKITYISILTACY 139
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
L+ GK H +I+ + V+ SL+ MY KCG L + +F ++ + ++Y+
Sbjct: 140 SPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
M+ A KE L +F +M EG+ PD V Y+ +L A + +++EG ++ +E
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR-IHKLTVEE 258
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH-HNLE 419
+ ++ +V + R G + A + + ++ VV+ +L++A H HN+E
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTA-DRDVVVYNALIAALAQHGHNVE 313
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 346/590 (58%), Gaps = 34/590 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +H +K + F A++L+ C S G +D AC +F I E +N++I GFV
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLI-HCYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ ++AL L+ +M V+ + T + ACAK++ L+ G Q+ ++ + +L
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMD-------------------------------QKS 196
+ N++++MY KC +E A +F M+ QK
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ +W+A+I+A+ NG +E L +F E+ +K + + LVS LSAC +GAL+LG+ H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ ++ +N V ++LI MY KCG LEK +F + + +S MI GLAMHG G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+ +F +M ++P+ V + V ACSH GLV+E F +M+ Y IVP +HY C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VD++GR+G L +A++ I++MPI + VW +LL A K+H NL + E+A L ++ +
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+VLLSN+YA+ +W +V+++R M GL + PG S +E+ +++F+S D +HP +
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSP 555
+Y +H++ +LK GY P+ISQVL+ ++E+E +E+ L HS+KLAI + LI
Sbjct: 629 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 688
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH+ KLIS +Y+REIIVRDR RFH F++G CSC D+W
Sbjct: 689 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 217/441 (49%), Gaps = 44/441 (9%)
Query: 13 LTQPEEP----PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
L+ P P P P N +++++ C +L + K+ H H+++ G F +P+ AS
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRH--ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASK 67
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGV 127
L A ALS + S++YA +F +I +P +F +NTLIR + + +++ + +M E
Sbjct: 68 LFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQC 127
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P+ +TFP L KA A++ +L G +HG K D+FV NSLI+ Y C ++ A
Sbjct: 128 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F + +K V SW+++I G + L+LF +M +E + +V VLSAC +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV-KASHVTMVGVLSACAKIR 246
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L+ G+ + N +N+ + +++DMY KCG +E LF M +K +T++ M+
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 308 GLAM-------------------------------HGQGKEALSIFSEM-LREGLEPDDV 335
G A+ +G+ EAL +F E+ L++ ++ + +
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
V LSAC+ G + G +K ++ I ++ + + G L ++ E+ S
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 396 MPIQQNDV-VWRSLLSASKVH 415
+++ DV VW +++ +H
Sbjct: 426 --VEKRDVFVWSAMIGGLAMH 444
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 332/558 (59%), Gaps = 4/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K++H + ++ GF A+ LV A GS+ A +F + E +N++I +V
Sbjct: 256 KEIHGYAMRAGFDSLVNIATALVDMYA--KCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +EA+ ++ +M + GV+P + + ACA L L+ G IH ++ + ++
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLI+MY KC++V+ A+++F ++ +++ SW+A+I A NG E L F +M +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQ-AR 432
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P+ VSV++A L K HG ++RN NV V T+L+DMY KCG +
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F MM+++ T++ MI G HG GK AL +F EM + + P+ V ++ V+SACSH+
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHS 552
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV GL CF MK Y I P++ HYG +VDL+GRAG L EA + I MP++ V+ +
Sbjct: 553 GLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
+L A ++H N+ E A+ LF++N +VLL+N+Y A W V ++R M +GL
Sbjct: 613 MLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S+VE+ +V+ F S +HP+ IY + ++ Q+K GY PD + +L +++
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLED 731
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
D K + L HS+KLAI+F L++ + G+ I + +NLR+C DCH TK IS++ REIIVRD
Sbjct: 732 DVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRD 791
Query: 588 RKRFHRFKDGTCSCRDYW 605
+RFH FK+G CSC DYW
Sbjct: 792 MQRFHHFKNGACSCGDYW 809
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 3/323 (0%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E +L+ C +L+E + + + K G + + LV+ +GS+D A +F
Sbjct: 37 EHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSL--FCRYGSVDEAARVFEP 94
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
ID+ + T+++GF K + ++AL + M + VEP + F L K C L+ G
Sbjct: 95 IDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+IHG + K GF DLF L NMY KC +V A +F +M ++ + SW+ I+A ++ N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G+ L++ M E +P +VSVL A + L + +GK HG +R V +
Sbjct: 215 GMARMALEMVNLMCEEN-LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI 273
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+DMY KCG L+ LF M ++ ++++ MI + KEA+ IF +ML EG+
Sbjct: 274 ATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGV 333
Query: 331 EPDDVVYVGVLSACSHAGLVNEG 353
+P DV +G L AC+ G + G
Sbjct: 334 KPTDVSVMGALHACADLGDLERG 356
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/528 (40%), Positives = 320/528 (60%), Gaps = 7/528 (1%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFE---EALFLYNEMFERGVE-PDNFTFPALF 138
YA ++F QI EP AF +N+LIR + + +Y M G P++FT
Sbjct: 79 YARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFAL 138
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSV 197
KAC+ + AL EG Q+H F+ G E +VQ L+N+Y KCE+V A +F M K++
Sbjct: 139 KACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNL 198
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
A+WSA+I ++ G+ +E L LF EM P+E +VSV+SAC GALDLG+ H
Sbjct: 199 AAWSAMIGGYSRVGMVNEALGLFREMQAADV-NPDEVTMVSVISACAKAGALDLGRWVHA 257
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ R +++ + T+LIDMY KCG +E+ +F MA++ +S MI GLA+HG +
Sbjct: 258 FIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEV 317
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +FS ML + P++V ++GVLSAC+H+GLVNEG + M+ E I P++++YGC+V
Sbjct: 318 ALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQ-ELGIKPSMENYGCMV 376
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL R+ +L EA + M I N V+WR+LL ASK + +I + A+K L ++ +P
Sbjct: 377 DLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPE 436
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
+YVLLSN+YA +W V+ +R +M +N G S +E+ ++KFV D SHP
Sbjct: 437 NYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGYLHKFVVSDDSHPEIKE 496
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
I ++ ++ ++ G+ P + VL DV E+EK L HS++LAIA+ L+ IR
Sbjct: 497 IRLLLREIADRVVRAGHKPWTAAVLHDVGEEEKEVALCEHSERLAIAYGLLKTKAPHVIR 556
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR C DCH K++S Y+REIIVRDR RFHRF +G+CSC+D+W
Sbjct: 557 VVKNLRFCPDCHEVAKIVSKSYDREIIVRDRVRFHRFVEGSCSCKDFW 604
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 338/561 (60%), Gaps = 7/561 (1%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H H++ G +PF A+ L+ S S+D A +F + + + +N L R
Sbjct: 100 LHRHLIHDGSDQDPFLATKLINM--YSELDSIDNARKVFDKTRKRTIYVWNALFRALTLA 157
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA----LKEGMQIHGHVFKVGFECD 165
E L LY M GV D FT+ + KAC +A L G +IHGH+ + GFE
Sbjct: 158 GYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGH 217
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+ + +L++MY + V AS +F QM K+V SWSA+IA ++ NG E L+LF +M
Sbjct: 218 VHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMML 277
Query: 226 E-KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E + P +VSVL AC L AL+ GK HG ++R + V ++L+ +Y +CG L
Sbjct: 278 ENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNL 337
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
E G +F M + ++++ +IS +HG G++A+ IF EM+ +GL P + +V VL AC
Sbjct: 338 ELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGAC 397
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
SHAGLV EG + F+ M ++I P+V+HY C+VDL+GRA L EA ++I M I+ V
Sbjct: 398 SHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKV 457
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W SLL + ++H N+E+ E A LF++ + +YVLL+++YA A+ W +V +++ + +
Sbjct: 458 WGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEA 517
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+GL + PG S +E+ RK+Y F+S D +P + ++ ++ ++ ++K +GY PD VL D
Sbjct: 518 RGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEMKEKGYVPDTKVVLYD 577
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
+D +EK + GHS+KLA+AF LI+ +G IRI +NLR+C DCH+ TK IS REI+
Sbjct: 578 LDPEEKERIVLGHSEKLALAFGLINSKKGETIRITKNLRLCEDCHSVTKFISKFANREIL 637
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRD RFH F+DG CSC DYW
Sbjct: 638 VRDVNRFHLFQDGVCSCGDYW 658
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 161/327 (49%), Gaps = 23/327 (7%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N LI+ K+ +AL ++ + P T+ L +C + +L +G+ +H H+
Sbjct: 51 NPLIQSLCKQGNLNQAL----QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIH 106
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
G + D F+ LINMY + + ++ A +F + ++++ W+A+ A G E L L
Sbjct: 107 DGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDL 166
Query: 220 FGEMNNEKCWRPEESILVS-VLSACT----HLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ MN + P + + VL AC + L G+ HG ++R+ +V + T+L
Sbjct: 167 YRRMN--RIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTL 224
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEP 332
+DMY + GC+ +F M K +++S MI+ + +G+ EAL +F +M+ E L P
Sbjct: 225 LDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLP 284
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ V V VL AC+ + +G L R L+ I+P V +V + R G L
Sbjct: 285 NSVTMVSVLQACAALAALEQGKLMHGYILRRGLD-SILPVV---SALVTVYARCGNLELG 340
Query: 390 LELIQSMPIQQNDVV-WRSLLSASKVH 415
+ + M ++ DVV W SL+S+ +H
Sbjct: 341 HRVFERM--EKRDVVSWNSLISSYGIH 365
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 128/234 (54%), Gaps = 12/234 (5%)
Query: 37 ILKTCKNLEEF-------KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
+LK C E F +++H H+L+ GF + + L+ A +G + A +F
Sbjct: 185 VLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYA--RFGCVLNASRVFD 242
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQAL 147
Q+ ++ +I + K + EAL L+ +M + + P++ T ++ +ACA L AL
Sbjct: 243 QMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAAL 302
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
++G +HG++ + G + L V ++L+ +Y +C +E +F++M+++ V SW+++I+++
Sbjct: 303 EQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSY 362
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+G + +++F EM ++ P VSVL AC+H G ++ GK S++R
Sbjct: 363 GIHGFGRKAIQIFKEMIDQG-LSPSPISFVSVLGACSHAGLVEEGKVLFESMVR 415
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 341/568 (60%), Gaps = 19/568 (3%)
Query: 49 KVHAHVLKWGFF-WNPFCASNLVATCALSHWGS--MDYACSIFRQIDEPGAFDFNTLIRG 105
++H L+ G F +P+ AS L+ + H S MD A F +I +P + G
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLH---MYHHCSRPMD-ARRAFDEIPDPNPVIVTAMASG 169
Query: 106 FVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+V+ +L L+ M + D F A A++ +H + K+GFE
Sbjct: 170 YVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFE 229
Query: 164 CDLFVQNSLINMYGK--CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
+ V N++++ Y K +E A +F M ++ V SW+++IA +A NG+ +E + L+
Sbjct: 230 RNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYS 288
Query: 222 EMNNE----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+M N KC L +VL AC H GA+ GK H ++R NV V TS++DM
Sbjct: 289 KMLNVGGGIKC---NAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDM 345
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG +E FR + +K L++S MI+G MHG+G+EAL IF+EM R GL P+ + +
Sbjct: 346 YSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITF 405
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
+ VL+ACSHAGL++EG ++ MK E+ I V+HYGC+VDL+GRAG L EA LI+ M
Sbjct: 406 ISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK 465
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
++ + +W +LLSA ++H N+E+ E++ K LF++++ + YVLLSN+YA A+ W DV +
Sbjct: 466 VKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVER 525
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
IR + ++ + + PG+S E+ K+Y F D+SHP IY + ++ +++ GY P+
Sbjct: 526 IRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPN 585
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
VL D+DE+EK L+ HS+KLA+AFAL++ S I I +NLR+C+DCHT K I+
Sbjct: 586 TGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITK 645
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I EREII+RD +RFH FKDG CSCRDYW
Sbjct: 646 ITEREIIIRDLQRFHHFKDGLCSCRDYW 673
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/530 (38%), Positives = 324/530 (61%), Gaps = 3/530 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ +F + +N++I G + + A+ ++ M + GV PD T +L
Sbjct: 219 GMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLA 278
Query: 139 KACAKLQALKEGMQIHGHVFKVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
A A+ + G +H ++ + G++ D+ N++++MY K K+E A +F M +
Sbjct: 279 SAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDA 338
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+ +I + NGL SE + ++ M + +P + VSVL A +HLGAL G H
Sbjct: 339 VSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 398
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
I+ L+V V T +ID+Y KCG L++ + LF + ++ +ISG+ +HG G +
Sbjct: 399 LSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAK 458
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
ALS+FS+M +EG+ PD V +V +L+ACSHAGLV++G F+ M+ Y I P +HY C+V
Sbjct: 459 ALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMV 518
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
D+ GRAG L +A + I++MPI+ + +W +LL A ++H N+E+G++A++NLF+++ +
Sbjct: 519 DMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVG 578
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS--HPAW 495
YVL+SNMYA+ +W V ++R+ + + L ++PG+S +EV R V F S ++ HP
Sbjct: 579 YYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQH 638
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ I + + +++ GY PD S VL+DV+EDEK + L HS++LAIAF +I+ +P
Sbjct: 639 EEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTP 698
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ I +NLR+C DCH TK IS I EREIIVRD RFH FKDG CSC D+W
Sbjct: 699 LHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 179/381 (46%), Gaps = 6/381 (1%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L+ + ++HA L+ G AS + L +G + A F ++
Sbjct: 77 LLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYL-RFGRVRDAYRAFDEMRHRDV 135
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N ++ G + EA+ L+ M GV D T ++ C L + +H +
Sbjct: 136 PAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLY 195
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
K G + +LFV N++I++YGK +E +F M + + +W++II+ H G +
Sbjct: 196 AVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASA 255
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI-RNISALNVIVETSLI 275
+++F M + P+ L+S+ SA G + G+ H ++ R ++I +++
Sbjct: 256 VEMFCGMRDSGV-SPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIV 314
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEPDD 334
DMY K +E +F M + ++++ +I+G +G EA+ ++ M + EGL+P
Sbjct: 315 DMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQ 374
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+V VL A SH G + +G + ++ + V CV+DL + G L EA+ L +
Sbjct: 375 GTFVSVLPAYSHLGALQQGTR-MHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFE 433
Query: 395 SMPIQQNDVVWRSLLSASKVH 415
P +++ W +++S VH
Sbjct: 434 QTP-RRSTGPWNAVISGVGVH 453
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 6/283 (2%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAI 188
D FTFP L +A Q Q+H ++G D F +L++ Y + +V A
Sbjct: 70 DAFTFPPLLRAA---QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F +M + V +W+A+++ N +E + LFG M E + + SVL C LG
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGV-AGDAVTVSSVLPMCVLLGD 185
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L H +++ + V ++ID+Y K G LE+ +F M+ + +T++ +ISG
Sbjct: 186 RALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
GQ A+ +F M G+ PD + + + SA + G + G M V
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVG 305
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ +VD+ + + A + SMP+ ++ V W +L++
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPV-RDAVSWNTLITG 347
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/521 (42%), Positives = 304/521 (58%), Gaps = 34/521 (6%)
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
Y M G+ DNFT P + K+CA L + G +HG +VG E D +V SLI+MY K
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154
Query: 179 CE-------------------------------KVEFASAIFKQMDQKSVASWSAIIAAH 207
C ++ A +F++M+ +++ SW+A+I+ +
Sbjct: 155 CGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGY 214
Query: 208 ASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
NG + L LF EM + +P +VSVL AC AL+ G+ H L
Sbjct: 215 TQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHL 274
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMAD--KCQLTYSVMISGLAMHGQGKEALSIFSE 324
N V+T+L MY KC L + C F M+A K + ++ MI+ A HG G EA+SIF
Sbjct: 275 NSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFEN 334
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
MLR G++PD V ++G+LS CSH+GL++ GL F+ M + + P V+HY CVVDL+GRAG
Sbjct: 335 MLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAG 394
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA ELI MP+Q VW +LL+A + H NLEI E+AA+ LF + + +YVLLSN
Sbjct: 395 RLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSN 454
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA A W +V K+R + +G+ +SPG S +E+ K + F+ D+SHP IY+ +
Sbjct: 455 LYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEA 514
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ ++K GY PD S VL D+ E+EK L HS+KLAIAF L++ G +R+ +NLR+
Sbjct: 515 LPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLLNTRPGVVLRVTKNLRI 574
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH TK IS IYEREIIVRD RFH FKDG+CSC DYW
Sbjct: 575 CGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 615
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE--PDNFTFPA 136
G + A +F +++ + +I G+ + E+AL L++EM + G E P+ T +
Sbjct: 187 GEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVS 246
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-- 194
+ ACA+ AL+ G +IH +G + VQ +L MY KC + A F + Q
Sbjct: 247 VLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG 306
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
K++ +W+ +I A+AS+G E + +F M +P+ + +LS C+H G +D G
Sbjct: 307 KNLIAWNTMITAYASHGCGVEAVSIFENMLRAGV-QPDAVTFMGLLSGCSHSGLIDAG 363
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 9/179 (5%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C LE +++H G N + L A + S+ A F I
Sbjct: 245 VSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCY--SLVEARCCFDMI 302
Query: 92 DEPGA--FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ G +NT+I + EA+ ++ M GV+PD TF L C+ +
Sbjct: 303 AQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDA 362
Query: 150 GMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS-WSAIIAA 206
G+ + + E + ++++ G+ ++ A + QM ++ S W A++AA
Sbjct: 363 GLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAA 421
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 319/543 (58%), Gaps = 38/543 (6%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG----MQIHG 155
+ LIR + AL LY + G+ P T P+L K+ A A+ + +H
Sbjct: 41 DALIRALSRSARPHLALPLYAHLLRAGLLPTPHTLPSLLKSMALSPAVPGAAVLALTVHT 100
Query: 156 HVFKVGFECDLFVQNSLINM--------------------------------YGKCEKVE 183
H K+G + + V N+LI + Y + ++
Sbjct: 101 HAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLLRTAAAVDASTFNTLITAYARAGRLA 160
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A A+F +M ++ SWSA++ + G E L++F M E RP++++LV VL+AC
Sbjct: 161 DARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDV-RPDDTVLVGVLAAC 219
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
GAL+ GK HG L + +N+ T+L+DMY KCG ++ + +F M K L ++
Sbjct: 220 AQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQYKNVLAWT 279
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI GLAMHG+G EA+ +F++M G+ PDD+ ++GVL AC+HAGLV++G FD M +
Sbjct: 280 TMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLCACTHAGLVDKGRELFDSMVRK 339
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y I P ++HYGC+VDL+ R G L EA E+IQ MP++ + ++W +L++ + H N+E E
Sbjct: 340 YGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRFHKNVEFAEY 399
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AK+ + YVLLSN+YA + R +IR M KG++++PG S VEV ++
Sbjct: 400 VAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLMREKGVDKTPGCSTVEVNGVIH 459
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKF-EGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
+F+ D SHP +I ++++ +++ EGY PD+ +VL D++E+EK L HS+KLA
Sbjct: 460 QFIVGDLSHPRIKDILSKWYEIDTRIRLEEGYIPDMKEVLLDIEEEEKEGALSRHSEKLA 519
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAFALI +S PIRI +NLR+C+DCH TKLIS +Y REI+VRDR RFH FK+GTCSC+
Sbjct: 520 IAFALISISDNMPIRIFKNLRVCHDCHHVTKLISKVYGREIVVRDRTRFHLFKEGTCSCK 579
Query: 603 DYW 605
DYW
Sbjct: 580 DYW 582
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 126/241 (52%), Gaps = 3/241 (1%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
A + G + A ++F ++ A ++ ++ G+V+ + EAL ++ M V PD+
Sbjct: 152 AYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFARMQAEDVRPDDTV 211
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ ACA+ AL++G +HG++ G + +LF +L++MY KC +V+ A +F++M
Sbjct: 212 LVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCGEVQLAMDVFERMQ 271
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
K+V +W+ +I A +G SE + LF +M + RP++ + VL ACTH G +D G+
Sbjct: 272 YKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGI-RPDDIAFIGVLCACTHAGLVDKGR 330
Query: 254 CTHGSLIRNISALNVIVETS-LIDMYVKCGCL-EKGLCLFRMMADKCQLTYSVMISGLAM 311
S++R I ++D+ + G L E + +M + L + +++G
Sbjct: 331 ELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDALIWGALMAGCRF 390
Query: 312 H 312
H
Sbjct: 391 H 391
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 353/605 (58%), Gaps = 47/605 (7%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL--------------SH-- 77
+LK+C K +E +++H HVLK GF + + ++L++ A SH
Sbjct: 95 LLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRD 154
Query: 78 -------------WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE-MF 123
G ++ A +F +I +N +I G+V+ ++EAL L+ E M
Sbjct: 155 VVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMM 214
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
V PD T + ACA+ +++ G +H + GF +L + N+LI++Y K +VE
Sbjct: 215 MTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVE 274
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 275 TACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPAC 333
Query: 244 THLGALDLGKCTH-------GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RMMA 295
HLGA+D+G+ H ++ N+S+L +TSLIDMY KCG ++ +F M+
Sbjct: 334 AHLGAIDIGRWIHVYINKKLKGVVTNVSSL----QTSLIDMYAKCGDIDAAQQVFDSSMS 389
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
++ T++ MISG AMHG+ A IFS M G+EPDD+ +VG+LSACSH+G+++ G
Sbjct: 390 NRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRN 449
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M Y I P ++HYGC++DL+G +G+ EA E+I +MP++ + V+W SLL A K+H
Sbjct: 450 IFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIH 509
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS-PGFS 474
NLE+GE AK L +I + YVLLSN+YA A RW +VAKIR + KG+ + PG S
Sbjct: 510 GNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCS 569
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+E+ V++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ + L
Sbjct: 570 SIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGAL 629
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
+ HS+KLAIAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RF F
Sbjct: 630 RHHSEKLAIAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHF 689
Query: 595 KDGTC 599
+DG C
Sbjct: 690 RDGVC 694
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 219/437 (50%), Gaps = 41/437 (9%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
+ +HA ++K G + S L+ C +S H+ YA S+F I EP +NT+ RG
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ AL LY M G+ PD++TFP L K+CAK + KEG QIHGHV K+GF+ D+
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 167 FVQNSLINMY---GKCEK----------------------------VEFASAIFKQMDQK 195
+V SLI+MY G+ E +E A +F ++ K
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V SW+A+I+ + G + E L+LF EM RP+ES +V+V+SAC +++LG+
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + + A N+ + +LID+Y K G +E LF + +K ++++ +I G
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHY 373
KEAL +F EMLR G P+DV + +L AC+H G ++ G + + KL+ +
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF---Q 430
++D+ + G + A ++ S ++ W +++S +H AA ++F +
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRAN----AAFDIFSRMR 420
Query: 431 INSHHPSDYVLLSNMYA 447
+N P D + + A
Sbjct: 421 MNGIEPDDITFVGLLSA 437
>gi|224123200|ref|XP_002330363.1| predicted protein [Populus trichocarpa]
gi|222871567|gb|EEF08698.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 340/571 (59%), Gaps = 5/571 (0%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
LK CK+ HA++ K+G + ++L+ + + + YA +F ++ EP
Sbjct: 16 LKNCKDFIFAISTHANLFKFGLLNDTITTNHLLNS--YLRFRRIQYAHHLFDEMHEPNVV 73
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +L+ G+V + AL+LY +M E V P+ FT + +C+ L LK G +H HV
Sbjct: 74 SWTSLMSGYVNMGRPQSALWLYTKMSESEVSPNGFTLATVINSCSILADLKTGKMVHAHV 133
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+G + +L V +SL++MYGKC V+ A +F M ++V SW+A+IA +A NG E L
Sbjct: 134 QILGLQGNLVVCSSLVDMYGKCNDVDGARMVFDSMSCRNVVSWTAMIAGYAQNGKGYEAL 193
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
++F E ++ RP +L SV++AC LG L GK THG++IR LN +V ++L+DM
Sbjct: 194 EVFREFSSYMMERPNHFMLASVINACASLGRLVSGKVTHGAVIRGGYELNDVVASALVDM 253
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG +FR + + + Y+ MI G A +G GK +L++F EM + P+DV +
Sbjct: 254 YAKCGSFLYSEKVFRRIRNPSVIPYTSMIVGAAKYGLGKLSLNLFEEMTDRKVMPNDVTF 313
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
VG+L ACSH+GLV+EGL + M ++ ++P V+HY CVVD++ R G L EA +L +S+
Sbjct: 314 VGILHACSHSGLVDEGLRLLNSMHEKHGVMPDVRHYTCVVDMLSRVGRLDEAYKLAKSIR 373
Query: 398 IQQND--VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
+ N+ ++W +LLS+S++H +++ A+K L + N YV LSN Y A W +
Sbjct: 374 VNPNEGALLWGTLLSSSRLHGRVDMAVEASKWLIEYNQQVAGAYVTLSNTYTLAGEWENA 433
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG-Y 514
+RTEM G+++ PG S +E+ +Y F + D S D + ++ ++E ++ G
Sbjct: 434 HSLRTEMELVGVHKEPGCSWIEIKDSIYVFYAGDLSCERGDEVISLLRELERRMMERGCV 493
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
V DV+++ K + + HS++LA+AF LI + +G IR+ +NLR+C+DCH KL
Sbjct: 494 GGSTGLVFVDVEQEVKEKIVGLHSERLALAFGLISIPKGVTIRVMKNLRICSDCHEAFKL 553
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I ER+ +VRD RFH FKDG+C+C+D+W
Sbjct: 554 ISKIVERDFVVRDVNRFHHFKDGSCTCKDFW 584
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/573 (38%), Positives = 331/573 (57%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ LK C + E +++H+ ++K + F L+ S SMD A +F+ +
Sbjct: 217 SALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDM--YSKCNSMDDARLVFKLMP 274
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N +I G + E EEA L+ M G+ + T + K+ A LQA Q
Sbjct: 275 ERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQ 334
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K GFE D +V NSLI+ YGKC VE A+ +F++ + +++++ A+A +G
Sbjct: 335 IHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQ 394
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L+L+ EM ++ +P+ + S+L+AC L A + GK H +++ ++
Sbjct: 395 GEEALRLYLEMQ-DRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGN 453
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY KCG +E C F + + +++S MI GLA HG GKEAL +F +ML+ G+ P
Sbjct: 454 SLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPP 513
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + V VL AC+HAGLV E F+ MK+ + I P +HY C++DL+GRAG L A+EL
Sbjct: 514 NHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMEL 573
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ MP Q N +VW +LL A+++H N+++GE AA+ L + +VLL+N+YA W
Sbjct: 574 VNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMW 633
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
VA++R M + + PG S +EV KVY F+ DRSH IY + ++ LK
Sbjct: 634 DKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKA 693
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P + L DV+ EK + L HS+KLA+AF LI G+PIR+ +NLR+C DCHT
Sbjct: 694 GYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVL 753
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REIIVRD RFH F++G+CSC +YW
Sbjct: 754 KFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 195/392 (49%), Gaps = 12/392 (3%)
Query: 25 LNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
L ++ E ++LK C K+L K+VH V+ GF + F A++LV A G
Sbjct: 4 LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYA--KCGGF 61
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
A S+F I + +N L +V EA+ L+++M G+ P+ F+ ++ C
Sbjct: 62 GDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVC 121
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
L+ +G +IHG++ K+G++ D F N+L++MY K +E AS++F ++ + + SW+
Sbjct: 122 TGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWN 181
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
AIIA + L+L EMN P L S L AC + +LG+ H SLI+
Sbjct: 182 AIIAGCVLHEYHHRALELLREMNKSGMC-PNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ + LIDMY KC ++ +F++M ++ + ++ +ISG + + + +EA S+
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY--GCVVDL 379
F M EG+ + VL + + + +C L + +Y ++D
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIA---ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDT 357
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G+ G + +A + + PI + V++ SL++A
Sbjct: 358 YGKCGHVEDATRVFEESPI-VDLVLFTSLVTA 388
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 192/393 (48%), Gaps = 8/393 (2%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+R E +++ C LE+ +K+H +++K G+ + F A+ LV A G ++
Sbjct: 106 GIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYA--KVGILE 163
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A S+F +I +P +N +I G V AL L EM + G+ P+ FT + KACA
Sbjct: 164 DASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACA 223
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ + G Q+H + K+ D F+ LI+MY KC ++ A +FK M ++ + +W+A
Sbjct: 224 GMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNA 283
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ H+ N E LF M+ E ++ L +VL + L A + + H +++
Sbjct: 284 VISGHSQNEEDEEAASLFPLMHTEGIGF-NQTTLSTVLKSIAALQANYMCRQIHALSLKS 342
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V SLID Y KCG +E +F + ++ +++ A GQG+EAL ++
Sbjct: 343 GFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLY 402
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
EM G++PD V +L+AC+ +G + L++ + + +V++ +
Sbjct: 403 LEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHI-LKFGFMSDIFAGNSLVNMYAK 461
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G + +A +P+ + V W +++ H
Sbjct: 462 CGSIEDASCAFSRIPV-RGIVSWSAMIGGLAQH 493
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 335/562 (59%), Gaps = 11/562 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
K++HA+ +K GF N + L+ A C M Y F + + T
Sbjct: 281 KEIHAYAIKNGFDSNILVGNTLIDMYAKCC-----CMSYGGRAFDLMAHKDLISWTTAAA 335
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+ + + +AL L ++ G++ D ++ AC L L + +IHG+ + G
Sbjct: 336 GYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS- 394
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D +QN++I++YG+C +++A IF+ ++ K V SW+++I+ + NGL ++ L++F M
Sbjct: 395 DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMK 454
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E P+ LVS+LSA L L GK HG +IR L + +L+DMY +CG +
Sbjct: 455 -ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSV 513
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
E +F ++ + ++ MIS MHG G+ A+ +F M E + PD + ++ +L AC
Sbjct: 514 EDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
SH+GLVNEG + MK EY++ P +HY C+VDL+GR L EA ++++SM + V
Sbjct: 574 SHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEV 633
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W +LL A ++H N EIGE+AA+ L +++ +P +YVL+SN++A RW DV ++R M
Sbjct: 634 WCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKG 693
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLR 523
GL ++PG S +EV K++ F+S+D+ HP D IY+ + Q+ +LK E GY VL
Sbjct: 694 SGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLH 753
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
+V E+EK + L GHS++LAIA+ L+ ++G+PIR+ +NLR+C DCH++ L+S +ERE+
Sbjct: 754 NVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFEREL 813
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFH FKDG CSC D+W
Sbjct: 814 IVRDASRFHHFKDGMCSCGDFW 835
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 213/422 (50%), Gaps = 28/422 (6%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF-RQI 91
+LK C +E+ ++H +K+G F ++LVA A + ++ A +F R
Sbjct: 63 VLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCN--DINGARKLFDRMY 120
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N++I + EAL L++EM + GV + +TF A +AC +K GM
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH + K G D++V N+L+ MY + K+ A+ IF ++ K + +W++++ NG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+SE L+ F ++ N +P++ ++S++ A LG L GK H I+N N++V
Sbjct: 241 LYSEALEFFYDLQNAD-LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LIDMY KC C+ G F +MA K ++++ +G A + +AL + ++ EG++
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV-------PTVQHYGCVVDLMGRAG 384
D + +L AC GL C ++K + P +Q+ ++D+ G G
Sbjct: 360 VDATMIGSILLAC-------RGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECG 410
Query: 385 MLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
++ A+ + +S I+ DVV W S++S VH+ L + + + P DYV L
Sbjct: 411 IIDYAVRIFES--IECKDVVSWTSMISC-YVHNGLANKALEVFSSMKETGLEP-DYVTLV 466
Query: 444 NM 445
++
Sbjct: 467 SI 468
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 145/276 (52%), Gaps = 2/276 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+ A IF ++ E F +N ++ G+V E AL +Y EM GV D++TFP L
Sbjct: 6 GSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLL 65
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSV 197
KAC ++ L G +IHG K G + +FV NSL+ +Y KC + A +F +M + V
Sbjct: 66 KACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDV 125
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW++II+A++ NG+ +E L LF EM + L AC + LG H
Sbjct: 126 VSWNSIISAYSGNGMCTEALCLFSEMLKAGV-VTNTYTFAAALQACEDSSFIKLGMQIHA 184
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+++++ L+V V +L+ MYV+ G + + +F + K +T++ M++G +G E
Sbjct: 185 AILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSE 244
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
AL F ++ L+PD V + ++ A G + G
Sbjct: 245 ALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 4/238 (1%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MYGKC V A IF +M ++S+ +W+A++ + SNG L+++ EM + +
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RM 293
V +L AC + L G HG I+ V V SL+ +Y KC + LF RM
Sbjct: 61 FPV-LLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++++ +IS + +G EAL +FSEML+ G+ + + L AC + + G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ + R++ V +V + R G + EA + ++ ++ V W S+L+
Sbjct: 180 MQIHAAILKSGRVLD-VYVANALVAMYVRFGKMPEAAVIFGNLE-GKDIVTWNSMLTG 235
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L+ + + L++ K++H +++ GF ++ LV A GS++ A IF
Sbjct: 469 LSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYA--RCGSVEDAYKIFTCTKNR 526
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ +I + E A+ L+ M + + PD+ TF AL AC+ + EG
Sbjct: 527 NLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFL 586
Query: 155 GHVFKVGFECDLFVQ--NSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAA 206
+ K ++ + + + L+++ G+ +E A I K M ++ + W A++ A
Sbjct: 587 -EIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGA 640
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/626 (35%), Positives = 345/626 (55%), Gaps = 57/626 (9%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL C K L + K++H++ ++ G F + F + L+ T A GSM A ++F +
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYA--KCGSMKDAVNVFNVM 320
Query: 92 DEPGAFDFNTLIRGFVKEVEF-----------------------------------EEAL 116
+ +N ++ G+ + +F +EAL
Sbjct: 321 EFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEAL 380
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK------------VGFEC 164
+ +M G EP++ T +L ACA L AL +GM+ H + K G
Sbjct: 381 DTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGE 440
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGE 222
DL V N+LI+MY KC + A IF + +++V +W+ +I +A G ++ LKLF E
Sbjct: 441 DLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSE 500
Query: 223 M-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYV 279
M + P + +L AC HL +L +GK H + R+ + V LIDMY
Sbjct: 501 MISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYS 560
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG ++ +F M + +++++ M+SG MHG+GKEAL IF +M + G PDD+ ++
Sbjct: 561 KCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L ACSH+G+V++GL FD M+ +Y ++ + QHY CV+DL+ R+G L +A + IQ MP++
Sbjct: 621 LLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPME 680
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ +W +LLSA +VH N+E+ E A L + + + Y L+SN+YA A+RW DVA+IR
Sbjct: 681 PSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIR 740
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M G+ + PG S V+ + F DRSHP IY ++ ++ ++K GY P+ +
Sbjct: 741 QLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETN 800
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
L DVD++EK L HS+KLA+A+ L+ S G PIRI +NLR+C DCH+ IS I
Sbjct: 801 FALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIV 860
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+ EIIVRD RFH FK+G+CSC YW
Sbjct: 861 DHEIIVRDSSRFHHFKNGSCSCGGYW 886
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 61/380 (16%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNP---------------FCASNLVATCALSHW-- 78
++LK C+++ +++H ++ +G P + + + T ++ +
Sbjct: 36 SLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYLA 95
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G+ A S+ ++ A +N L+R ++E + A+ + M G +PD+FT P
Sbjct: 96 CGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYA 155
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS- 196
KAC +L + + G HG + GFE ++FV N+L+ MY + +E AS +F ++ +K
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215
Query: 197 --VASWSAIIAAHASNGLWSECLKLFGEMN---NEKCWRPEESI--LVSVLSACTHLGAL 249
V SW++I+AAH L LF EM +EK I +V++L AC L AL
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK------------ 297
K H IRN + + V +LID Y KCG ++ + +F +M K
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335
Query: 298 -----------------------CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+T+S +I+G A G G+EAL F +M+ G EP+
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNS 395
Query: 335 VVYVGVLSACSHAGLVNEGL 354
V + +LSAC+ G +++G+
Sbjct: 396 VTIISLLSACASLGALSQGM 415
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 344/590 (58%), Gaps = 34/590 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +H +K + F A++L+ C S G +D AC +F I E +N++I GFV
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLI-HCYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFV 210
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ ++AL L+ +M V+ + T + ACAK++ L+ G ++ ++ + +L
Sbjct: 211 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLT 270
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQ-------------------------------KS 196
+ N++++MY KC +E A +F M++ K
Sbjct: 271 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKD 330
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ +W+A+I+A+ NG +E L +F E+ +K + + LVS LSAC +GAL+LG+ H
Sbjct: 331 IVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIH 390
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ +N +N V ++LI MY KCG LEK +F + + +S MI GLAMHG G
Sbjct: 391 SYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGS 450
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+ +F +M ++P+ V + V ACSH GLV+E F +M+ Y IVP +HY C+
Sbjct: 451 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACI 510
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VD++GR+G L +A++ I++MPI + VW +LL A K+H NL + E+A L ++ +
Sbjct: 511 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRND 570
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+VLLSN+YA++ +W +V+++R M GL + PG S +E+ +++F+S D +HP +
Sbjct: 571 GAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 630
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSP 555
+Y +H++ +LK GY P++S VL+ ++E+E +E+ L HS+KLAI + LI
Sbjct: 631 KVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKA 690
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLRMC DCH KLIS +Y REIIVRDR RFH F++G CSC D+W
Sbjct: 691 IRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 190/360 (52%), Gaps = 12/360 (3%)
Query: 13 LTQPEEP----PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
L+ P P P P N + + ++++ C +L + K+ HAH+++ G F +P+ AS
Sbjct: 10 LSLPRHPNFSNPNQPTTN-NERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASK 68
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERG 126
L A ALS + S++YA +F +I +P +F +NTLIR + + +++ + +M E
Sbjct: 69 LFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQ 128
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
P+ +TFP L KA A++ +L G +HG K D+FV NSLI+ Y C ++ A
Sbjct: 129 CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSAC 188
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F + +K V SW+++I G + L+LF +M +E + +V VLSAC +
Sbjct: 189 KVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV-KASHVTMVGVLSACAKI 247
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
L+ G+ + N +N+ + +++DMY KCG +E LF M +K +T++ M+
Sbjct: 248 RDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 307
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
G A+ + A + + M ++ D V + ++SA G NE LL F ++L+ I
Sbjct: 308 DGYAISEDYEAAREVLNAMPKK----DIVAWNALISAYEQNGKPNEALLVFHELQLQKNI 363
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/574 (36%), Positives = 342/574 (59%), Gaps = 7/574 (1%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++IL C L++ +++H ++K G+ + + L++ A GS+ A ++F +I
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYA--KCGSLMDARNVFERI 468
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N +I +V+ +++ A+ + + + G++PD+ TF ++ C AL+ G
Sbjct: 469 SKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGK 528
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+ + + GFE DL ++N+L++M+ C + A +F M ++ + SW+ IIA +G
Sbjct: 529 WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHG 588
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
F +M E +P++ +L+AC AL G+ H + +V+V
Sbjct: 589 ENQFAFDYF-KMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T LI MY KCG ++ +F + K +++ MI+G A HG+GKEAL +F +M +EG++
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD + +VG LSAC+HAGL+ EGL F+ MK ++ I P ++HYGC+VDL GRAG+L EA+E
Sbjct: 708 PDWITFVGALSACAHAGLIKEGLHHFESMK-DFNIEPRMEHYGCMVDLFGRAGLLHEAVE 766
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I M ++ + +W +LL A +VH ++E+ E A+ +++ + YV+LSN+YA A
Sbjct: 767 FINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGM 826
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W +V K+R M +G+ + PG S +EV +V+ F S D++HP + I+ + ++ ++K
Sbjct: 827 WKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKK 886
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD VL DV++ EK L HS++LAIA+ L+ +PI I++NLR+C DCHT
Sbjct: 887 LGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTA 946
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS I +R+II RD RFH FKDG CSC D+W
Sbjct: 947 TKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 226/424 (53%), Gaps = 25/424 (5%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKW 57
+++ L +++L+ + P ++++ Q ++L+ C KNL + +++H H+ K+
Sbjct: 79 LSKAGQLSEAMLVLLSVDSP-----HIQIHRQTYSSLLQLCIKHKNLGDGERIHNHI-KF 132
Query: 58 G------FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVE 111
F WN + + A C G+ + A IF ++ + + +N L+ G+V+
Sbjct: 133 SKIQPDIFMWNMLIS--MYAKC-----GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
+EEA L+ +M + GV+PD +TF + ACA + + +G ++ + G++ DLFV +
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA 245
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
LINM+ KC V+ A +F + ++ + +W+++I A + + + LF M E +P
Sbjct: 246 LINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV-QP 304
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
++ VS+L AC H AL+ GK H + + V T+L+ MY KCG +E L +F
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
++ + ++++ MI+G A HG+ +EA F++M+ G+EP+ V ++ +L ACS +
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+G DR+ ++ + + ++ + + G L +A + + + +QN V W ++++A
Sbjct: 425 QGRQIHDRI-IKAGYITDDRVRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITA 482
Query: 412 SKVH 415
H
Sbjct: 483 YVQH 486
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 199/384 (51%), Gaps = 8/384 (2%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++LK C + LE+ K+VHA + + G + + L++ + GSM+ A +F +
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSM--YTKCGSMEDALEVFNLV 367
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +I GF + EEA +N+M E G+EP+ TF ++ AC++ ALK+G
Sbjct: 368 KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGR 427
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH + K G+ D V+ +L++MY KC + A +F+++ +++V +W+A+I A+ +
Sbjct: 428 QIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHE 487
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ + F + E +P+ S S+L+ C AL+LGK +IR ++ +
Sbjct: 488 KYDNAVATFQALLKEGI-KPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIR 546
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+ M+V CG L + LF M ++ ++++ +I+G HG+ + A F M G++
Sbjct: 547 NALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVK 606
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD + + G+L+AC+ + EG + V G ++ + + G + +A
Sbjct: 607 PDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTG-LISMYTKCGSIDDAHL 665
Query: 392 LIQSMPIQQNDVVWRSLLSASKVH 415
+ ++P ++N W S+++ H
Sbjct: 666 VFHNLP-KKNVYSWTSMITGYAQH 688
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 185/377 (49%), Gaps = 11/377 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFD 98
KN+++ ++ + +L G+ + F + L+ C G +D A +F +
Sbjct: 219 KNVDKGGELFSLILNAGWDTDLFVGTALINMHIKC-----GGVDDALKVFNNLPRRDLIT 273
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ ++I G + +F++A L+ M E GV+PD F +L KAC +AL++G ++H +
Sbjct: 274 WTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMK 333
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+VG + +++V +L++MY KC +E A +F + ++V SW+A+IA A +G E
Sbjct: 334 EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFL 393
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F +M E P +S+L AC+ AL G+ H +I+ + V T+L+ MY
Sbjct: 394 FFNKM-IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMY 452
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG L +F ++ + + ++ MI+ H + A++ F +L+EG++PD +
Sbjct: 453 AKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFT 512
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L+ C + G + + + +V + G L A+ L MP
Sbjct: 513 SILNVCKSPDALELGKWV-QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP- 570
Query: 399 QQNDVVWRSLLSASKVH 415
+++ V W ++++ H
Sbjct: 571 ERDLVSWNTIIAGFVQH 587
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 164/320 (51%), Gaps = 3/320 (0%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N + K + EA+ + + ++ T+ +L + C K + L +G +IH H+
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+ D+F+ N LI+MY KC A IF +M K V SW+ ++ + + + E +L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
+M + +P++ V +L+AC +D G ++ ++ V T+LI+M++
Sbjct: 193 HEQMVQDGV-KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHI 251
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG ++ L +F + + +T++ MI+GLA H Q K+A ++F M EG++PD V +V
Sbjct: 252 KCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVS 311
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L AC+H + +G RMK E + + ++ + + G + +ALE+ ++
Sbjct: 312 LLKACNHPEALEQGKRVHARMK-EVGLDTEIYVGTALLSMYTKCGSMEDALEVF-NLVKG 369
Query: 400 QNDVVWRSLLSASKVHHNLE 419
+N V W ++++ H +E
Sbjct: 370 RNVVSWTAMIAGFAQHGRME 389
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/529 (40%), Positives = 323/529 (61%), Gaps = 3/529 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M YA +F ++ +P F +NT+++G+VK ++A+ +Y +M GV PD FTFP +
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KACA+L L G+ +HGHV K G E V+ L+ MY K ++ A +F M ++ +
Sbjct: 143 KACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLV 202
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A+IA G S+ L+ F EM +P+ +VS LSAC HLG L+ G+ +
Sbjct: 203 AWNALIAVCVQTGFSSKALQSFREMGMAGI-KPDSVTIVSALSACGHLGCLETGEEIYEF 261
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
N+IV + +DM KCG ++K + LF M + +++S +I G A++G+ ++A
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKA 321
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL--EYRIVPTVQHYGCV 376
L++FS M +G++P+ V ++ VLSACSH G VNEG F+ M + I P +HY C+
Sbjct: 322 LALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACM 381
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GR+G L EA I+ MPI+ + +W +LL A +H N+++G+ A LF++
Sbjct: 382 VDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIA 441
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
S +VLLSNMYA A RW+ V K+R M KG + +S VE +++ D+SHP
Sbjct: 442 SYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSA 501
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
+I + + Q+K GY P+ V DV+++EK L HS+KLAIAF+LI+ S PI
Sbjct: 502 SILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPI 561
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C DCHT+ KL+S I REII+RD+ RFH FK+G CSC+D+W
Sbjct: 562 RVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 326/564 (57%), Gaps = 5/564 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+ E ++VHAH++K + + + L+ + + A + ++ E + +I
Sbjct: 26 IREGQRVHAHMIKTCYEPPVYLRTRLIVL--YNKCRCLGDARRVLDEMPERNVVSWTAMI 83
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ + EAL L+ EM G P+ FTF + +C + G QIH V K FE
Sbjct: 84 SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 143
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+FV +SL++MY K K+ A +F + ++ V S +AII+ +A GL E L LF +
Sbjct: 144 SHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 203
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E R SVL+A + L ALD G+ H ++R V+++ SLIDMY KCG
Sbjct: 204 QREGM-RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 262
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLS 342
L +F M ++ ++++ M+ G + HG G+EA+ +F M E ++PD V ++ VLS
Sbjct: 263 LTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLS 322
Query: 343 ACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
CSH G+ + GL F M + P ++HYGCVVDL GRAG + EA E I+ MP +
Sbjct: 323 GCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPT 382
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W SLL A +VH N+ IGE A+ L +I S + +YV+LSN+YA A RW DV +R
Sbjct: 383 AAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVREL 442
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M K + + PG S +E+ + ++ F + DRSHP + ++ + ++ ++K GY P++S V
Sbjct: 443 MKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCV 502
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DVD+++K + L+GHS+KLA+AF LI G+P+RI +NLR+C DCH + K +S +Y R
Sbjct: 503 LYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGR 562
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
E+ +RD+ RFH GTCSC DYW
Sbjct: 563 EVSLRDKNRFHHIVGGTCSCGDYW 586
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 153/294 (52%), Gaps = 9/294 (3%)
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+G+E + + ++ C A++EG ++H H+ K +E ++++ LI +Y KC +
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A + +M +++V SW+A+I+ ++ G SE L LF EM P E +VL++CT
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGT-APNEFTFATVLTSCT 122
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
LG+ H +I+ ++ V +SL+DMY K G + + +F + ++ ++ +
Sbjct: 123 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 182
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMK 361
+ISG A G +EAL +F + REG+ + V Y VL+A S ++ G R K
Sbjct: 183 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAK 242
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L + +V +Q+ ++D+ + G L + + SMP ++ + W ++L H
Sbjct: 243 LPFYVV--LQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKH 291
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT L L+ ++VH+HVL+ + ++L+ S GS+ Y+ IF + E
Sbjct: 219 LTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM--YSKCGSLTYSRRIFDSMPER 276
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQI 153
+N ++ G+ K EA+ L+ M E V+PD+ TF A+ C+ G++I
Sbjct: 277 TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEI 336
Query: 154 HGHVF--KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ K GFE ++ +++++G+ +VE A K+M + + A W +++ A
Sbjct: 337 FYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 392
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/552 (39%), Positives = 322/552 (58%), Gaps = 5/552 (0%)
Query: 55 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE 114
+K GF + + + L C S G ++ A +F QI +P +N +I G+ E E
Sbjct: 234 MKVGFHSHAYVITGLA--CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETES 291
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
++ L+ E+ G + ++ + L L IHG K G + V +L
Sbjct: 292 SVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTT 351
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEE 233
+Y + ++E A +F + +KS+ASW+A+I+ +A NGL + + LF EM +KC RP
Sbjct: 352 VYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEM--QKCEVRPNP 409
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+ S+LSAC LGAL LGK H + R N+ V T+LIDMY KCG + + LF M
Sbjct: 410 VTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSM 469
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M +K +T++ MISG +HG G EAL++F+EML + P V ++ VL ACSHAGLV EG
Sbjct: 470 MPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
F M ++ P +HY C+VDL+GRAG L +AL+ I+ MP++ VW +LL A
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACM 589
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
+H + + +A+ LF+++ + YVLLSN+Y+ Q + + A +R + + L ++PG
Sbjct: 590 IHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGC 649
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
+L+EVA ++ F S D+SHP IY M+ ++ +++ G+ + L DV+E+EK
Sbjct: 650 TLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELM 709
Query: 534 LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHR 593
+K HS+KLAIAF LI G+ IRI +NLR+C DCH TK IS I ER I+VRD RFH
Sbjct: 710 VKVHSEKLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHH 769
Query: 594 FKDGTCSCRDYW 605
FKDG CSC DYW
Sbjct: 770 FKDGICSCGDYW 781
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 191/398 (47%), Gaps = 22/398 (5%)
Query: 58 GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
GF + F S +VA C + + A +F + E +NT++ G VK F+EA+
Sbjct: 136 GFGSDLFVGSAIVA-CYFK-FSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAIL 193
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
++ +M + G+ D+ T A+ A+LQ L GM I KVGF +V L +Y
Sbjct: 194 IFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYS 253
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESI 235
KC ++E A +F Q+ Q + S++A+I+ + N ++LF E+ + EK S
Sbjct: 254 KCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKV---NSSS 310
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+V ++ G L L +C HG ++ N V T+L +Y + +E LF +
Sbjct: 311 IVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESS 370
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+K +++ MISG A +G ++A+S+F EM + + P+ V +LSAC+ G ++ G
Sbjct: 371 EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Query: 356 CFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
D R E I + ++D+ + G + EA L MP ++N V W +++S
Sbjct: 431 VHDLINRESFESNIFVST----ALIDMYAKCGSITEAQRLFSMMP-EKNAVTWNAMISGY 485
Query: 413 KVHHNLEIGEIAAKNLFQINSH---HPSDYVLLSNMYA 447
+H A NLF H P+ LS +YA
Sbjct: 486 GLHGYGH----EALNLFNEMLHSRVSPTGVTFLSVLYA 519
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 7/308 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT++ L + + HA ++ G + + L T LSH ++D A +F I P
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKL--THKLSHLKAIDQASLLFSTIPNP 71
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQI 153
F +N LIR F A+ LY + + +EPDNFT+ + + L
Sbjct: 72 DLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAH 131
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
GF DLFV ++++ Y K +V A +F M ++ W+ +++ N +
Sbjct: 132 S---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCF 188
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E + +FG+M + + + +VL L L LG ++ + V T
Sbjct: 189 DEAILIFGDMVKGGIGF-DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITG 247
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L +Y KCG +E LF + ++Y+ MISG + + + ++ +F E+L G + +
Sbjct: 248 LACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVN 307
Query: 334 DVVYVGVL 341
VG++
Sbjct: 308 SSSIVGLI 315
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/596 (37%), Positives = 335/596 (56%), Gaps = 34/596 (5%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF-RQIDEPGAFDFNTL 102
+++FK+ H ++ G P +++ AL G +DYA + R P F FNT
Sbjct: 1 MKQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTT 60
Query: 103 IRGFVKEVE---FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
IRGF + ++ L+ M + P+NFTF LF+ C+ A G Q HG V K
Sbjct: 61 IRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIK 120
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
FE D+FV+NS+I Y C ++ A +F + + V SW+++I NG E L L
Sbjct: 121 NSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSL 180
Query: 220 FGEMN--NEKCW----------------------------RPEESILVSVLSACTHLGAL 249
F +M N+ W P +ILVSVLSAC+ LGAL
Sbjct: 181 FSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGAL 240
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
D G H + + ++ I+ +LIDMY KCG ++ + F + Y+ ISGL
Sbjct: 241 DHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGL 300
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
AM+G +EAL +F +M EG+ PD V Y+ VL ACSHAG V +G F M + I P
Sbjct: 301 AMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPE 360
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
+ HY C+VDL+GRAG+L EA + + SMPI+ ++V+W +LL A +V+ N E+G+ L
Sbjct: 361 LDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLV 420
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD 489
+ + +H Y+LLSN+YA + + D ++R M + +++ PG SL+EVA V++F S D
Sbjct: 421 ESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGD 480
Query: 490 RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH 549
RSH + IY M ++ ++K GY + V+ DV+E+EK + HS+KLA+AF ++
Sbjct: 481 RSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEEEEKEAVIGHHSEKLAVAFGFLY 540
Query: 550 LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
GS +RI +N+R+C+DCH KL+S +++R+I +RDRK FH F++G CSC+DYW
Sbjct: 541 TKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDYW 596
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/587 (36%), Positives = 336/587 (57%), Gaps = 34/587 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH VL+ GF F S LV A G + A +F++++ +NTLI G ++
Sbjct: 168 VHCQVLRLGFGAYAFVGSPLVDMYA--KMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 110 VEFEEALFLYNEMFER-------------------------------GVEPDNFTFPALF 138
E+A L+ M +R GV D +TF ++
Sbjct: 226 KMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L AL+EG QIH ++ + +E ++FV ++L++MY KC + A A+F++M +++
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+I + N E ++ F EM + +P++ L SV+S+C +L +L+ G H
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGI-KPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ + + V +L+ +Y KCG +E LF M+ Q++++ +++G A G+ KE
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +ML GL+PD V ++GVLSACS AGLV +G FD M+ ++ IVP HY C++D
Sbjct: 465 IDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMID 524
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L R+G EA E I+ MP + W +LLS+ ++ N+EIG+ AA+NL + + +P+
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPAS 584
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLL +M+A +W +VA +R M + + + PG S ++ KV+ F + D+SHP I
Sbjct: 585 YVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRI 644
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YE + + ++ EGY PD+S VL DV + +K + HS+KLAIAF LI + Q PIRI
Sbjct: 645 YEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRI 704
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TK IS I R+I+VRD RFH+F DGTCSC D+W
Sbjct: 705 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 157/357 (43%), Gaps = 35/357 (9%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQ 145
+F + E A +N LI GF ++ LY + E V P T A+ + L
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK--------------------------- 178
G +H V ++GF FV + L++MY K
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 179 ----CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
C+ +E A +F+ M + +W+ ++ NGL E L +F M E ++
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVG-IDQY 279
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
S+L+AC L AL+ GK H + R NV V ++L+DMY KC + +FR M
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+ ++++ MI G + +EA+ FSEM +G++PDD V+S+C++ + EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
F + L ++ + +V L G+ G + +A L M + V W +L++
Sbjct: 400 Q-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVTG 454
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 9/252 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C LEE K++HA++ + + N F S LV S S+ A ++FR++
Sbjct: 283 SILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDM--YSKCRSIRLAEAVFRRMT 340
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ + EEA+ ++EM G++PD+FT ++ +CA L +L+EG Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V N+L+ +YGKC +E A +F +M SW+A++ +A G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M +P+ + VLSAC+ G ++ G C + ++ + I +
Sbjct: 461 AKETIDLFEKMLANGL-KPDGVTFIGVLSACSRAGLVEKG-CDYFDSMQKDHGIVPIDDH 518
Query: 272 -TSLIDMYVKCG 282
T +ID+Y + G
Sbjct: 519 YTCMIDLYSRSG 530
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 35/256 (13%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P F L A AK L + VF + +LF +N+L++ V +
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F M ++ S++A+I +S G + ++L+ + E+ RP L +++ + L
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVK---------------------------- 280
LG H ++R V + L+DMY K
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 281 ---CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
C +E LF++M D+ +T++ M++GL +G EAL +F M EG+ D +
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281
Query: 338 VGVLSACSHAGLVNEG 353
+L+AC + EG
Sbjct: 282 GSILTACGALAALEEG 297
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/584 (38%), Positives = 341/584 (58%), Gaps = 12/584 (2%)
Query: 27 LRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
++L + T++K C N++E K++H V+K G ++ + L+ A S +D
Sbjct: 290 VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV--AYSKCSEIDD 347
Query: 84 ACSIFRQIDE-PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + + +I G+V+ + A+ L+ +M GV P++FT+ + A A
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA 407
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ QIH V K +E V +L + Y K A+ IF+ +D+K + +WSA
Sbjct: 408 AVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSA 463
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH-LGALDLGKCTHGSLIR 261
+++ +A G +K+F ++ E P E SVL+AC +++ GK H I+
Sbjct: 464 MLSGYAQMGDIEGAVKIFLQLAKEGV-EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 522
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ + + V ++L+ MY K G +E +F+ D+ ++++ MISG A HG GK++L I
Sbjct: 523 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKI 582
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM + LE D + ++GV+SAC+HAGLVNEG FD M +Y IVPT++HY C+VDL
Sbjct: 583 FEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYS 642
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAGML +A++LI MP +WR+LL+A +VH N+++GE+AA+ L + + YVL
Sbjct: 643 RAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVL 702
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA A W + AK+R M K + + G+S +EV K + F++ D SHP D IY
Sbjct: 703 LSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLK 762
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ +LK GY PD VL DV+E+ K L HS++LAIAF LI G+PI+I +N
Sbjct: 763 LEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKN 822
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCHT KLIS I R+I+VRD RFH FK G+CSC DYW
Sbjct: 823 LRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 198/380 (52%), Gaps = 15/380 (3%)
Query: 37 ILKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + K+VH +K GF + ++LV + S++ +F ++
Sbjct: 98 VLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTE--SVEDGERVFDEMRV 155
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +L+ G+ + E+AL L+++M G++P+ FTF A+ A A+++G+Q+
Sbjct: 156 KNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQV 215
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V K G + +FV NS++NMY K V A A+F M+ ++ SW+++IA +NGL
Sbjct: 216 HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLD 275
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E +LF M E + ++I +V+ C ++ + K H +I+N S ++ ++T+
Sbjct: 276 LEAFELFYRMRLEGV-KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTA 334
Query: 274 LIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
L+ Y KC ++ LF MM + ++++ +ISG +G+ A+++F +M REG+ P
Sbjct: 335 LMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRP 394
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ Y +L+A + V+ + +K Y P+V + D + G EA ++
Sbjct: 395 NHFTYSTILTANA---AVSPSQIHALVVKTNYENSPSVGT--ALSDSYSKIGDANEAAKI 449
Query: 393 IQSMPIQQNDVV-WRSLLSA 411
+ I + D+V W ++LS
Sbjct: 450 FE--LIDEKDIVAWSAMLSG 467
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 1/260 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F + + G N L+ F + + +EAL L+ + G D + + K C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
G Q+H K GF D+ V SL++MY K E VE +F +M K+V SW++++A
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NGL + LKLF +M E +P +VL GA++ G H +I++
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGI-KPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ V S+++MY K + +F M ++ ++++ MI+G +G EA +F M
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 327 REGLEPDDVVYVGVLSACSH 346
EG++ ++ V+ C++
Sbjct: 287 LEGVKLTQTIFATVIKLCAN 306
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE-SILVSVLSACTHL 246
+F + Q+ ++ + ++ + N E L LF + + P + S L VL C L
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLF--LGLRRSGSPTDGSSLSCVLKVCGCL 105
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+GK H I+ +V V TSL+DMY+K +E G +F M K ++++ ++
Sbjct: 106 FDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLL 165
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+G +G ++AL +FS+M EG++P+ + VL + G V +G+ M ++ +
Sbjct: 166 AGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVH-TMVIKSGL 224
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
T+ +V++ ++ M+ +A + SM +N V W S+++
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSME-NRNAVSWNSMIAG 268
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 326/564 (57%), Gaps = 5/564 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+ E ++VHAH++K + + + L+ + + A + ++ E + +I
Sbjct: 493 IREGQRVHAHMIKTCYEPPVYLRTRLIVL--YNKCRCLGDARRVLDEMPERNVVSWTAMI 550
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ + EAL L+ EM G P+ FTF + +C + G QIH V K FE
Sbjct: 551 SGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFE 610
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+FV +SL++MY K K+ A +F + ++ V S +AII+ +A GL E L LF +
Sbjct: 611 SHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRL 670
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E R SVL+A + L ALD G+ H ++R V+++ SLIDMY KCG
Sbjct: 671 QREGM-RSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS 729
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLS 342
L +F M ++ ++++ M+ G + HG G+EA+ +F M E ++PD V ++ VLS
Sbjct: 730 LTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLS 789
Query: 343 ACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
CSH G+ + GL F M + P ++HYGCVVDL GRAG + EA E I+ MP +
Sbjct: 790 GCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPT 849
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W SLL A +VH N+ IGE A+ L +I S + +YV+LSN+YA A RW DV +R
Sbjct: 850 AAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVREL 909
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M K + + PG S +E+ + ++ F + DRSHP + ++ + ++ ++K GY P++S V
Sbjct: 910 MKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELSCV 969
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DVD+++K + L+GHS+KLA+AF LI G+P+RI +NLR+C DCH + K +S +Y R
Sbjct: 970 LYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHNFAKFLSRVYGR 1029
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
E+ +RD+ RFH GTCSC DYW
Sbjct: 1030 EVSLRDKNRFHHIVGGTCSCGDYW 1053
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 160/308 (51%), Gaps = 12/308 (3%)
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ +EAL EM +G+E + + ++ C A++EG ++H H+ K +E ++++
Sbjct: 460 QLKEALL---EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRT 516
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
LI +Y KC + A + +M +++V SW+A+I+ ++ G SE L LF EM
Sbjct: 517 RLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGT-A 575
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P E +VL++CT LG+ H +I+ ++ V +SL+DMY K G + + +
Sbjct: 576 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRV 635
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + ++ ++ + +ISG A G +EAL +F + REG+ + V Y VL+A S +
Sbjct: 636 FDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAAL 695
Query: 351 NEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
+ G R KL + +V +Q+ ++D+ + G L + + SMP ++ + W +
Sbjct: 696 DHGRQVHSHVLRAKLPFYVV--LQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNA 750
Query: 408 LLSASKVH 415
+L H
Sbjct: 751 MLVGYSKH 758
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT L L+ ++VH+HVL+ + ++L+ S GS+ Y+ IF + E
Sbjct: 686 LTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDM--YSKCGSLTYSRRIFDSMPER 743
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQI 153
+N ++ G+ K EA+ L+ M E V+PD+ TF A+ C+ G++I
Sbjct: 744 TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEI 803
Query: 154 HGHVF--KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ K GFE ++ +++++G+ +VE A K+M + + A W +++ A
Sbjct: 804 FYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 859
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 327/530 (61%), Gaps = 2/530 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G+++ A +F ++ + + ++I +V+E + +A+ L++EM +GV PD +T
Sbjct: 342 SKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 401
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
++ ACA +L +G +H +V K G +L V N+LINMY KC VE A +F ++ K
Sbjct: 402 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK 461
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ +I ++ N L +E L+LF +M +K ++P++ + VL AC L ALD G+
Sbjct: 462 DIVSWNTMIGGYSQNLLPNEALELFLDM--QKQFKPDDITMACVLPACAGLAALDKGREI 519
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++R ++ V +L+DMY KCG L LF M+ K ++++VMI+G MHG G
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA+S F+EM G+EPD+ + +L+ACSH+GL+NEG F+ M+ E + P ++HY C
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 639
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
VVDL+ R G L +A + I+SMPI+ + +W LLS ++HH++++ E A+++F++ +
Sbjct: 640 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 699
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YV+L+N+YA A++W +V K+R M +G Q+PG S +EV K FV+ + HP
Sbjct: 700 TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQA 759
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
I ++ ++ Q++ E YS VL + D+ EK GHS+K A+AF +++L G
Sbjct: 760 KKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRT 819
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+R+++N R+C DCH K +S + EI++RD RFH FKDG CSCRD +
Sbjct: 820 VRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRDAF 869
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 201/378 (53%), Gaps = 18/378 (4%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
++E K+VH +VLK GF N ++L+A A +G ++ A ++F ++ EP +N++I
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIA--AYFKFGGVESAHNLFDELSEPDVVSWNSMI 268
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G V L ++ +M GVE D T ++ ACA + L G +HG K F
Sbjct: 269 NGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFS 328
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
++ N+L++MY KC + A+ +F +M ++ SW++IIAA+ GL+S+ + LF EM
Sbjct: 329 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEM 388
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ K RP+ + S++ AC +LD G+ H +I+N N+ V +LI+MY KCG
Sbjct: 389 QS-KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 447
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E+ +F + K ++++ MI G + + EAL +F +M ++ +PDD+ VL A
Sbjct: 448 VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPA 506
Query: 344 CSHAGLVNEGLLCFDRMK-----LEYRIVPTVQHYGC-VVDLMGRAGMLGEALELIQSMP 397
C+ GL D+ + + R + H C +VD+ + G+L A L +P
Sbjct: 507 CA-------GLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP 559
Query: 398 IQQNDVVWRSLLSASKVH 415
+++ + W +++ +H
Sbjct: 560 -KKDLISWTVMIAGYGMH 576
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 191/379 (50%), Gaps = 8/379 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C K+LE+ K+VH+ ++ G + + LV + G + IF +I
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFM--YVNCGDLVQGRKIFDKIM 156
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F +N L+ + K F E++ L+ +M + GV + +TF + K A L +KE +
Sbjct: 157 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 216
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG+V K+GF + V NSLI Y K VE A +F ++ + V SW+++I NG
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
L++F +M + + LVSVL AC ++G L LG+ HG ++ + V+
Sbjct: 277 SGNGLEIFIQMLILGV-EVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG L +F M D ++++ +I+ G +A+ +F EM +G+ P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D ++ AC+ + +++G + ++ + + ++++ + G + EA +
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEEARLV 454
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+P+ ++ V W +++
Sbjct: 455 FSKIPV-KDIVSWNTMIGG 472
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 12/321 (3%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
++ ++ + CA+ ++L++G ++H + G D + L+ MY C + IF ++
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNN----EKCWRPEESILVSVLSACTHLGA 248
V W+ +++ +A G + E + LF +M C+ VL LG
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY-----TFTCVLKCFAALGK 210
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
+ K HG +++ N V SLI Y K G +E LF +++ ++++ MI+G
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
++G L IF +ML G+E D V VL AC++ G ++ G ++
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG-RALHGFGVKACFSE 329
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
V ++D+ + G L A E+ M V W S++ A+ V L I +
Sbjct: 330 EVVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSII-AAYVREGLYSDAIGLFDE 387
Query: 429 FQINSHHPSDYVLLSNMYARA 449
Q P Y + S ++A A
Sbjct: 388 MQSKGVRPDIYTVTSIVHACA 408
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 330/528 (62%), Gaps = 6/528 (1%)
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+G + A +F ++ + + T+I + ++AL M GV P+ FT+ ++
Sbjct: 13 FGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSV 72
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
+AC L L+ Q+H + K+G + D+FV+++LI++Y + ++E A +F +M +
Sbjct: 73 LRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDL 129
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
WS+IIA A N E L+LF M + +++ L SVL ACT L L+LG+ H
Sbjct: 130 VVWSSIIAGFAQNSDGDEALRLFKRMKRAG-FLAQQTTLTSVLRACTGLALLELGRQVHV 188
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+++ ++I+ +L+DMY KCG LE +F M +K +++S MI+GLA +G KE
Sbjct: 189 HVLKYDQ--DLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKE 246
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +F M G++P+ V VGVL ACSHAGLV EGL F MK + I P +HYGC++
Sbjct: 247 ALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMI 306
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L EA++LI M + + V WR+LL+A +VH N+++ AAK + +++
Sbjct: 307 DLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAG 366
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLSN+YA QRW DVA++R M ++G+ + PG S +EV+++++ F+ DRSHP
Sbjct: 367 TYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILGDRSHPQIRE 426
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
I ++Q+ ++L GY PD + VL+D++ ++ ++ L+ HS+KLAI F L+ L +G IR
Sbjct: 427 INIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLMSLPRGQTIR 486
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C DCH +TKL++ + +R I++RD R+H F+DG CSC D+W
Sbjct: 487 IRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 146/314 (46%), Gaps = 48/314 (15%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++L+ C L +++H ++K G + F S L+ S WG ++ A +F ++
Sbjct: 71 SVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDV--YSRWGELENALRVFDEMVTGD 128
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
++++I GF + + +EAL L+ M G T ++ +AC L L+ G Q+H
Sbjct: 129 LVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHV 188
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
HV K ++ DL + N+L++MY KC +E A+A+F +M +K V SWS +IA A NG E
Sbjct: 189 HVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKE 246
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
LKLF M +P +V VL AC+H
Sbjct: 247 ALKLFESMKVLGI-KPNYVTIVGVLFACSH------------------------------ 275
Query: 276 DMYVKCGCLEKGLCLFRMMA-----DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
G +E+GL F M D + Y MI L G+ EA+ + +EM
Sbjct: 276 -----AGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEM---EC 327
Query: 331 EPDDVVYVGVLSAC 344
EPD V + +L+AC
Sbjct: 328 EPDAVTWRALLNAC 341
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
F+ N LINMY K + A +F +M ++V SW+ +I+A+++ L + L+ M E
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
RP SVL AC L L + H +I+ +V V ++LID+Y + G LE
Sbjct: 61 GV-RPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
L +F M + +S +I+G A + G EAL +F M R G VL AC+
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176
Query: 347 AGLVNEG 353
L+ G
Sbjct: 177 LALLELG 183
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI+MYVK G L +F M D+ ++++ MIS + +AL MLREG+ P+
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 334 DVVYVGVLSACSHAGLVNEGLL--CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
Y VL AC GL N L C ++ L+ + ++D+ R G L AL
Sbjct: 66 MFTYSSVLRACD--GLFNLRQLHCCIIKIGLDSDVFVR----SALIDVYSRWGELENALR 119
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
+ M + + VVW S+++
Sbjct: 120 VFDEM-VTGDLVVWSSIIAG 138
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 344/576 (59%), Gaps = 17/576 (2%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD-YACS--IFRQ 90
I+K C L F+ ++H V+K+G+ F +++L+ + +G D Y S +F +
Sbjct: 16 IIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLI-----TMYGKCDKYELSRQVFDE 70
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + A ++ +I +++ +E L+ +M G P A+ A A +++ +E
Sbjct: 71 MPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACVRSHEEA 127
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
++ V + G + D VQ++ M+ +C +VE A +F + K + +W+ I A+
Sbjct: 128 DDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKA 187
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI- 269
+ E L L +M + + P+ L+ V+ AC+ L + L HG + ++
Sbjct: 188 DMPLEALGLLKQMMLQGIF-PDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLA 246
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
VET+LID+YVKCG L +F M ++ +T+S MISG MHG G+EAL++F +M +
Sbjct: 247 VETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KAS 305
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++PD + +V +LSACSH+GLV EG CF+ M ++ + P +HY C+VD++GRAG L EA
Sbjct: 306 VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEA 365
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ I+ MP++ N VW +LL A ++H N+++ E+ A+ LF ++ H+ YV+L N+Y
Sbjct: 366 CDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLT 425
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+ + IRT M ++G+ + G+S++E+ K+Y FV+ DRSHP D IY + ++ ++
Sbjct: 426 GKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLMDRI 485
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
+ EGY+PDI+ VL DVDE+ K L HS+KLAI F L++L GS IRI +NLR+C DCH
Sbjct: 486 RQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKNLRVCGDCH 545
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T TK IS + REI+VRD RFH FK+G CSCRDYW
Sbjct: 546 TATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 151/301 (50%), Gaps = 19/301 (6%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G++PDNFTFP + KAC+ L+ + G++IH V K G++ +F+ NSLI MYGKC+K
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
E + +F +M K+ SWSAII A + E LF +M +E +IL ++
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
+H A D+ + ++ N + V+++ M+ +CG +E LF + K +T
Sbjct: 121 VRSHEEADDVYRV----VVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT 176
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ I EAL + +M+ +G+ PD + +GV+ ACS L F
Sbjct: 177 WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACS-------TLASFQLAH 229
Query: 362 LEYRIVPTVQHYG-------CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
+ + I+ T Y ++DL + G L A ++ M ++N + W +++S +
Sbjct: 230 IVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQ-ERNIITWSAMISGYGM 288
Query: 415 H 415
H
Sbjct: 289 H 289
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 339/574 (59%), Gaps = 7/574 (1%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C + + ++VHA ++ GF ++ ++ G++D A +F +
Sbjct: 331 VSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDV--YCKCGAVDSARKVFDGM 388
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + +N +I+G+ + + EAL L+ M GV+ + + A AC +L L EG
Sbjct: 389 QDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGR 448
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H + ++G E ++ V N+LI MY KC++ + A+ +F ++ K+ SW+A+I NG
Sbjct: 449 RVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNG 508
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ ++LF M E +P+ LVS++ A + + HG IR +V V
Sbjct: 509 SSEDAVRLFSRMQLENV-KPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVL 567
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+LIDMY KCG + LF D+ +T++ MI G HG GK A+ +F EM G
Sbjct: 568 TALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV 627
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P++ ++ VLSACSHAGLV+EG F MK +Y + P ++HYG +VDL+GRAG L EA
Sbjct: 628 PNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWS 687
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
IQ MP++ V+ ++L A K+H N+E+ E +A+ +F++ +VLL+N+YA A
Sbjct: 688 FIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASL 747
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DVA++RT M KGL ++PG+S+V++ +++ F S +H +IY + ++ ++K
Sbjct: 748 WKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKA 807
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD + DV++D K + L HS+KLAIA+ LI + G+ I+I +NLR+C DCH
Sbjct: 808 VGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNA 866
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS++ REII+RD +RFH FKDG CSC DYW
Sbjct: 867 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
D + +R + AL + M G P TF +L K CA L G +H
Sbjct: 191 DHHARLRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQ 250
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ G + +L NMY KC + A +F +M + +W+A++A +A NGL
Sbjct: 251 LAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAA 310
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ + M E RP+ LVSVL AC AL + H +R V V T+++D
Sbjct: 311 VGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILD 370
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y KCG ++ +F M D+ ++++ MI G A +G EAL++F M+ EG++ DV
Sbjct: 371 VYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVS 430
Query: 337 YVGVLSACSHAGLVNEG 353
+ L AC G ++EG
Sbjct: 431 VLAALHACGELGFLDEG 447
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/596 (38%), Positives = 350/596 (58%), Gaps = 47/596 (7%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K +E +++H HVLK GF + + ++L++
Sbjct: 81 LLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRD 140
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T ++ + S Y A +F +I +N +I G+ + +++AL L+ EM +
Sbjct: 141 VVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMK 200
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V+PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC +VE
Sbjct: 201 TNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVET 260
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A + + + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 261 ACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACA 319
Query: 245 HLGALDLGKCTH--------GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA- 295
HLGA+D+G+ H G ++ N S+L TSLIDMY KCG ++ + A
Sbjct: 320 HLGAIDIGRWIHVYIDKKLKGVVVTNASSL----RTSLIDMYAKCGDIDAAPQVSDSSAF 375
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
++ T++ MI G AMHG+ A IFS M + G+EPDD+ +VG+LSACSH+G+++ G
Sbjct: 376 NRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRN 435
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M+ +Y I P ++HYGC++DL+G +G+ EA E+I +MP++ + V+W SLL A K+H
Sbjct: 436 IFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIH 495
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS-PGFS 474
NLE+GE AK L +I +P YVLLSN+YA A +W +V KIRT + KG+ + PG S
Sbjct: 496 GNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCS 555
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+E+ V++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L
Sbjct: 556 SIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGAL 615
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKR 590
+ HS+KLAIAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR R
Sbjct: 616 RHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/387 (31%), Positives = 198/387 (51%), Gaps = 36/387 (9%)
Query: 64 FCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
+ S L+ C LS H+ + YA S+F I EP +N + RG + AL LY M
Sbjct: 7 YAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM 66
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY---GKC 179
G+ P+ FTFP L K+CAK + KEG QIHGHV K+GF+ DL+V SLI+MY G+
Sbjct: 67 ISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRL 126
Query: 180 EK----------------------------VEFASAIFKQMDQKSVASWSAIIAAHASNG 211
E +E A +F ++ K V SW+A+I+ +A G
Sbjct: 127 EDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETG 186
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ + L+LF EM +P+ES + +V+SAC G+++LG+ H + + N+ +
Sbjct: 187 NYKKALELFKEMMKTNV-KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LID+Y KCG +E L +++K ++++ +I G KEAL +F EMLR G
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 332 PDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHY-GCVVDLMGRAGMLGE 388
P+DV + +L AC+H G ++ G + + KL+ +V ++D+ + G +
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDA 365
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A ++ S ++ W +++ +H
Sbjct: 366 APQVSDSSAFNRSLSTWNAMIFGFAMH 392
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 146/340 (42%), Gaps = 62/340 (18%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N++ E T++ C ++E ++VH+ + GF SNL AL S
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGF------GSNLKIVNALIDLYSKC 255
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ AC + + +NTLI G+ ++EAL L+ EM G P++ T ++
Sbjct: 256 GEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 315
Query: 139 KACAKLQALKEGMQIHGHVFK----VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD- 193
ACA L A+ G IH ++ K V ++ SLI+MY KC ++ A +
Sbjct: 316 PACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAF 375
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+S+++W+A+I A +G + +F M P++ V +LSAC+H G LDLG
Sbjct: 376 NRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGI-EPDDITFVGLLSACSHSGMLDLG- 433
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISG 308
RNI FR M +T Y MI
Sbjct: 434 -------RNI---------------------------FRSMRQDYNITPKLEHYGCMIDL 459
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
L G KEA + + M +EPD V++ +L AC G
Sbjct: 460 LGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHG 496
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/584 (37%), Positives = 333/584 (57%), Gaps = 9/584 (1%)
Query: 27 LRLKEQECLTILKTCKNLEEFKKV----HAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
LR +LK C KKV H++VL G + F ++LV S+ G
Sbjct: 242 LRPSPVTMANLLKACGQ-SGLKKVGMCAHSYVLALGMGNDVFVLTSLVDM--YSNLGDTG 298
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + +N +I G+V+ E+ L+ + + G D+ T +L + C+
Sbjct: 299 SAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCS 358
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ L+ G +H + + E L + ++++MY KC ++ A+ +F +M +K+V +W+A
Sbjct: 359 QTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTA 418
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ + NG + LKLF +M EK LVS++ C HLG+L G+ H IR+
Sbjct: 419 MLVGLSQNGYAEDALKLFCQMQEEKV-AANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRH 477
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRM-MADKCQLTYSVMISGLAMHGQGKEALSI 321
A + ++ ++LIDMY KCG + LF K + + MI G MHG G+ AL +
Sbjct: 478 GYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGV 537
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
+S M+ E L+P+ +V +L+ACSH+GLV EG F M+ ++ + P +HY C+VDL
Sbjct: 538 YSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHS 597
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L EA EL++ MP Q + V +LLS + H N +G A L ++ + YV+
Sbjct: 598 RAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVM 657
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA A++W V IR M +G+ + PG+SL+EV KVY F + D SHP+W +IY++
Sbjct: 658 LSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQL 717
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + +++ EGY PD S VLRDV+E K + L GHS++LAIAF L+ GS I+I +N
Sbjct: 718 LENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKN 777
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH TK IS I +REIIVRD RFH F +G CSC D+W
Sbjct: 778 LRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 194/396 (48%), Gaps = 13/396 (3%)
Query: 26 NLRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
++ + C+ LK C +L E ++ ++ GF + + S++V L G +
Sbjct: 140 DIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNF--LVKRGYLA 197
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + E +N++I G+V++ F E++ ++ EM G+ P T L KAC
Sbjct: 198 DAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACG 257
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ K GM H +V +G D+FV SL++MY A+ +F M +S+ SW+A
Sbjct: 258 QSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNA 317
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ + NG+ E LF + + LVS++ C+ L+ G+ H +IR
Sbjct: 318 MISGYVQNGMIPESYALFRRLVQSGSGF-DSGTLVSLIRGCSQTSDLENGRILHSCIIRK 376
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
++++ T+++DMY KCG +++ +F M K +T++ M+ GL+ +G ++AL +F
Sbjct: 377 ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLF 436
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC---FDRMKLEYRIVPTVQHYGCVVDL 379
+M E + + V V ++ C+H G + +G F R + V T ++D+
Sbjct: 437 CQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT----SALIDM 492
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G + A +L + ++ ++ S++ +H
Sbjct: 493 YAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMH 528
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 171/371 (46%), Gaps = 11/371 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
L K +HA ++K F A+ L+ S G + +A ++F Q P N
Sbjct: 58 NTLIHVKSIHAQIIKNWVSTESFLAAKLIRV--YSDLGFLGHARNVFDQCSLPETAVCNA 115
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I GF++ + E L+ M +E +++T KAC L + GM+I + G
Sbjct: 116 MIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRG 175
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F L+V +S++N K + A +F M +K V W++II + GL+ E +++F
Sbjct: 176 FHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFL 235
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
EM RP + ++L AC G +G C H ++ +V V TSL+DMY
Sbjct: 236 EMIGGG-LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNL 294
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +F M + ++++ MISG +G E+ ++F +++ G D V ++
Sbjct: 295 GDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLI 354
Query: 342 SACSHAGLVNEGLL---CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
CS + G + C R +LE +V + +VD+ + G + +A + M
Sbjct: 355 RGCSQTSDLENGRILHSCIIRKELESHLVLST----AIVDMYSKCGAIKQATIVFGRMG- 409
Query: 399 QQNDVVWRSLL 409
++N + W ++L
Sbjct: 410 KKNVITWTAML 420
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 326/530 (61%), Gaps = 2/530 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G+++ A +F ++ + + + I +V+E + +A+ L++EM +GV PD +T
Sbjct: 617 SKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 676
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
++ ACA +L +G +H +V K G +L V N+LINMY KC VE A +F ++ K
Sbjct: 677 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK 736
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ +I ++ N L +E L+LF +M +K ++P++ + VL AC L ALD G+
Sbjct: 737 DIVSWNTMIGGYSQNSLPNEALELFLDM--QKQFKPDDITMACVLPACAGLAALDKGREI 794
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++R ++ V +L+DMY KCG L LF M+ K ++++VMI+G MHG G
Sbjct: 795 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA+S F+EM G+EPD+ + +L+ACSH+GL+NEG F+ M+ E + P ++HY C
Sbjct: 855 NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 914
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
VVDL+ R G L +A + I+SMPI+ + +W LLS ++HH++++ E A+++F++ +
Sbjct: 915 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 974
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YV+L+N+YA A++W +V K+R M +G Q+PG S +EV K FV+ + HP
Sbjct: 975 TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQA 1034
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
I ++ ++ Q++ E Y VL + D+ EK GHS+K A+AF +++L G
Sbjct: 1035 KRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLPPGRT 1094
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+R+++N R+C DCH K +S +REI++RD RFH FKDG CSCRD +
Sbjct: 1095 VRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRDAF 1144
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 199/378 (52%), Gaps = 18/378 (4%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
++E K+VH +VLK GF N ++L+A A +G ++ A ++F ++ EP +N++I
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIA--AYFKFGGVESAHNLFDELSEPDVVSWNSMI 543
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G V L ++ +M GVE D T ++ A A + L G +HG K F
Sbjct: 544 NGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFS 603
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
++ N+L++MY KC + A+ +F +M ++ SW++ IAA+ GL+S+ + LF EM
Sbjct: 604 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEM 663
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ K RP+ + S++ AC +LD G+ H +I+N N+ V +LI+MY KCG
Sbjct: 664 QS-KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 722
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E+ +F + K ++++ MI G + + EAL +F +M ++ +PDD+ VL A
Sbjct: 723 VEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPA 781
Query: 344 CSHAGLVNEGLLCFDRMK-----LEYRIVPTVQHYGC-VVDLMGRAGMLGEALELIQSMP 397
C+ GL D+ + + R + H C +VD+ + G+L A L +P
Sbjct: 782 CA-------GLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIP 834
Query: 398 IQQNDVVWRSLLSASKVH 415
+++ + W +++ +H
Sbjct: 835 -KKDLISWTVMIAGYGMH 851
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 189/379 (49%), Gaps = 8/379 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C K+LE+ K+VH+ ++ G + + LV + G + IF +I
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYV--NCGDLVQGRKIFDKIM 431
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F +N L+ + K F E++ L+ +M + GV + +TF + K A L +KE +
Sbjct: 432 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG+V K+GF + V NSLI Y K VE A +F ++ + V SW+++I NG
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
L++F +M + + LVSVL A ++G L LG+ HG ++ + V+
Sbjct: 552 SGNGLEIFIQMLILGV-EVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG L +F M D ++++ I+ G +A+ +F EM +G+ P
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D ++ AC+ + +++G + ++ + + ++++ + G + EA +
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+P+ ++ V W +++
Sbjct: 730 FSKIPV-KDIVSWNTMIGG 747
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 12/321 (3%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
++ ++ + CA+ ++L++G ++H + G D + L+ MY C + IF ++
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNN----EKCWRPEESILVSVLSACTHLGA 248
V W+ +++ +A G + E + LF +M C+ VL LG
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY-----TFTCVLKCFAALGK 485
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
+ K HG +++ N V SLI Y K G +E LF +++ ++++ MI+G
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
++G L IF +ML G+E D V VL A ++ G ++ G ++
Sbjct: 546 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG-RALHGFGVKACFSE 604
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
V ++D+ + G L A E+ M V W S + A+ V L I +
Sbjct: 605 EVVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSTI-AAYVREGLYSDAIGLFDE 662
Query: 429 FQINSHHPSDYVLLSNMYARA 449
Q P Y + S ++A A
Sbjct: 663 MQSKGVRPDIYTVTSIVHACA 683
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/574 (40%), Positives = 342/574 (59%), Gaps = 17/574 (2%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++K C L +E K++H LK GF + F +LV S G +D A +F + +
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNM--YSKCGEIDCARKVFDGMID 175
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+LI G+ + E + AL L+ EM ER D F++ L +K ++ ++
Sbjct: 176 KDVVLWNSLIDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDGLSKCGKVESARKL 231
Query: 154 HGHVFKVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+ C +L N++IN Y K + A +F QM + +W+ +IA + NG
Sbjct: 232 FDQM-----PCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQ 286
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ + +K+F M RP + LVSVLSA + L L G+ H + +N L+ I+ T
Sbjct: 287 FMDAVKMFFMMLKLGS-RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT 345
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SLI+MY KCGC+E L +FR + K ++ +I GL +HG AL++F EM + GL+P
Sbjct: 346 SLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKP 405
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ ++++GVL+AC+HAGLV++G FD M EY+I PT++HYGC+VD++ RAG L EA
Sbjct: 406 NAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNT 465
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I++MPI N V+W SLL S+ H ++IGE AA+ + ++ Y+LLSNMYA + W
Sbjct: 466 IENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMW 525
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
V+ +R M +G + PG S VE +++F+ D SHP IY + +M+ +LK
Sbjct: 526 EKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCV 585
Query: 513 GYSPDISQVLRDVD-EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ PD +QVL ++ E EK L+ HS++LAIAF LI++ G PIRI +NLR+CNDCH+
Sbjct: 586 GHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSV 645
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKL+S IY REIIVRD RFH FK+G+CSC DYW
Sbjct: 646 TKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 679
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 167/309 (54%), Gaps = 10/309 (3%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+E +++HA LK F +PF +S L+A + + YA SIF +I +NT+I+
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 86
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+V+ + + L++E+ + PDNFT P + K CA+L ++EG QIHG K+GF
Sbjct: 87 CYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS 145
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+FVQ SL+NMY KC +++ A +F M K V W+++I +A G L+LF EM
Sbjct: 146 DVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMP 205
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ ++LV LS C G ++ + L + N++ ++I+ Y+K G
Sbjct: 206 ERDAF--SWTVLVDGLSKC---GKVESAR----KLFDQMPCRNLVSWNAMINGYMKSGDF 256
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ L LF M +T+++MI+G ++GQ +A+ +F ML+ G P V VLSA
Sbjct: 257 DSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV 316
Query: 345 SHAGLVNEG 353
S ++ +G
Sbjct: 317 SGLAVLGKG 325
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 330/567 (58%), Gaps = 12/567 (2%)
Query: 49 KVHAHVLKWGFFWNPFCAS--NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
++HA +LK G + + L ALS G ++YA I R + P +F +NT+IR +
Sbjct: 11 QLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPNSFYYNTMIRAY 70
Query: 107 VKEVEFEEA--LFLYNEMFERGV----EPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+ A LFLY + + PD+FT+P + KAC+K + G QIHG VFK
Sbjct: 71 SDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQIHGLVFKS 130
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G D ++ N+LI++Y + A +F +M + V SW++II N E ++LF
Sbjct: 131 GVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRLF 190
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M E P E + SVL AC GAL+ G+ H + + N V T+LIDMY K
Sbjct: 191 THMI-ENGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAK 249
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CGC++ L +F +K ++ +I+GLA HG +A+ F M + ++ D+ V
Sbjct: 250 CGCIDGALEVFDETLEKDVYVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAV 309
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
LSA +AGLV+EGLL F R+K +++I PT+QHYGCVVD++ RAG L +A E I+ MPI+
Sbjct: 310 LSAYRNAGLVSEGLLFFRRLK-KHKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEP 368
Query: 401 NDVVWRSLLSASKVHHNLEIGE--IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ V+WR+L+ K+ ++E E + L ++S YVLL N+YA +W + AK
Sbjct: 369 DAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTGSYVLLENVYAATGKWEEKAKT 428
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M +GL + P S +E+ V++F + D H +YE + +E +L+ EGY+P +
Sbjct: 429 RELMYQRGLMKPPACSRIEIDGVVHEFTAGDSRHDEATAVYEKLEDVEERLRGEGYNPIV 488
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
S+VL ++D+DEK +L HS+KLA++F L+ S GS IRI +NLR C DCH++ KLIS +
Sbjct: 489 SEVLLEIDDDEKASQLLHHSEKLAVSFGLVKSSPGSVIRIVKNLRSCEDCHSFMKLISKV 548
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
Y+R+IIVRDR RFH F G CSC D W
Sbjct: 549 YQRDIIVRDRIRFHHFSGGNCSCGDRW 575
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/649 (35%), Positives = 350/649 (53%), Gaps = 74/649 (11%)
Query: 29 LKEQECLT-ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV-ATCALSHWGSMDYACS 86
+ + CL L+ CK L + K++H + K G P + LV A ++ S+DYA
Sbjct: 22 MTKDSCLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARK 81
Query: 87 IFRQIDEP-----GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
F E F N+LIRG+ EA+ LY M GV P+++TFP + C
Sbjct: 82 AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141
Query: 142 AKLQALKEGMQI------------------------------HGHVFKVGFE-------- 163
K+ A EG+Q+ HGH G
Sbjct: 142 TKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWT 201
Query: 164 ---------------CDLFVQ-------NSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
LF + N+L++MY KC ++ A +F + +++ ++
Sbjct: 202 SLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYN 261
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
I++ +A GL E L + EM ++ RP+ ++S +SA L L GK HG +
Sbjct: 262 TILSNYARQGLAREALAILDEML-QQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVH 320
Query: 262 NISALNVI-----VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
N I + T+L+DM+ +CG + + +F M ++ ++ I +AM G G+
Sbjct: 321 TYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGE 380
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
A +F++ML +G++PD V++V VL+ACSH G V +GL F M+ ++ I P ++HYGC+
Sbjct: 381 GATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLME-DHGISPQIEHYGCM 439
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GRAG+L EA +LI+SMP++ NDVVW SLL+A +VH N+E+ AA+ + ++
Sbjct: 440 VDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRA 499
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+VLLSN+YA A +W DVA++R + KG+ + PG S V+V +++F S D SHP
Sbjct: 500 GVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMT 559
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
+I M+ +M + G+ PD+S VL DVDE EK L HS+KLAIAF LI + PI
Sbjct: 560 HIALMLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPI 619
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLRMC+DCH++ K+ S+IY REIIVRD RFH F+ G CSC DYW
Sbjct: 620 RVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668
>gi|224119910|ref|XP_002318193.1| predicted protein [Populus trichocarpa]
gi|222858866|gb|EEE96413.1| predicted protein [Populus trichocarpa]
Length = 533
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/524 (39%), Positives = 324/524 (61%), Gaps = 9/524 (1%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQ 145
IF ++ + +I + + + EEAL L+ +M E G+ D+ ++ A +L
Sbjct: 14 IFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSIAVVSVASAVGQLG 73
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+K +HG+ F+ +L V NS++ M+ KC E A +F M ++ V SW+++++
Sbjct: 74 DVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMMMERDVISWNSMLS 133
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NG +E L LF EM + C +P + ++SAC +LG LG+ H ++ +
Sbjct: 134 GYTQNGQATEALLLFDEMRDSDC-QPTPVTALIMVSACAYLGFRHLGRKFHDFIVDSRME 192
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMM--ADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++ + +L+DMY KCG LEK + LF + ++ +++V+ISG MHG GKEAL +FS
Sbjct: 193 IDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYGMHGHGKEALELFS 252
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ--HYGCVVDLMG 381
M EG+EP+ + +LSACSHAGL++EG CF MK R+ T++ H+ CVVD++G
Sbjct: 253 RMQEEGVEPNHFTFTSILSACSHAGLIDEGRKCFAEMK---RLSVTLEDKHHACVVDMLG 309
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG+L EA +LI+ MP +D VW +LL A K+H N+E+G+ AA NL Q+ +H YVL
Sbjct: 310 RAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNMELGKTAASNLLQLEPNHTGYYVL 369
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
+SN+YA + +W +V K+R +M +KGL + FS++E + + F + D+ +P +Y+
Sbjct: 370 MSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDILGFHTADQENPYRHEVYKK 429
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + ++K GY PD+S L DV+E++K L HS+KLA+AF ++ + G IR+ +N
Sbjct: 430 MESLAIEMKMAGYVPDLSCALHDVEEEDKERMLNYHSEKLAVAFGVLKIDPGMVIRVTKN 489
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+CNDCH+ K IS IY+R+IIVRD RFH F+ GTCSC+DYW
Sbjct: 490 LRVCNDCHSAFKYISHIYQRKIIVRDANRFHHFQGGTCSCKDYW 533
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 5/275 (1%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY KC IF +M K + W+A+I A+ E L LF +M E+ +
Sbjct: 1 MYAKCGLFVDCRKIFDEMSTKDLVCWTAMITAYEQAEKPEEALILFKKMQQEEGLLADSI 60
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
+VSV SA LG + HG R + V S++ M+ KCG EK +F MM
Sbjct: 61 AVVSVASAVGQLGDVKNAHTVHGYAFRKSLIEELCVGNSILAMHTKCGNTEKARLVFDMM 120
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
++ ++++ M+SG +GQ EAL +F EM +P V + ++SAC++ G + G
Sbjct: 121 MERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMVSACAYLGFRHLGR 180
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM-PIQQNDVVWRSLLSASK 413
F ++ R+ ++D+ + G L +A++L + P ++N W L+S
Sbjct: 181 K-FHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERNAGSWNVLISGYG 239
Query: 414 VH-HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+H H E E+ ++ Q P+ + S + A
Sbjct: 240 MHGHGKEALELFSR--MQEEGVEPNHFTFTSILSA 272
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 125/267 (46%), Gaps = 6/267 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G+ + A +F + E +N+++ G+ + + EAL L++EM + +P T +
Sbjct: 108 GNTEKARLVFDMMMERDVISWNSMLSGYTQNGQATEALLLFDEMRDSDCQPTPVTALIMV 167
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKS 196
ACA L G + H + E D + N+L++MY KC +E A +F + +++
Sbjct: 168 SACAYLGFRHLGRKFHDFIVDSRMEIDTNLSNALMDMYAKCGDLEKAVDLFNGIPPTERN 227
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+ +I+ + +G E L+LF M E P S+LSAC+H G +D G+
Sbjct: 228 AGSWNVLISGYGMHGHGKEALELFSRMQEEGV-EPNHFTFTSILSACSHAGLIDEGRKCF 286
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR-MMADKCQLTYSVMISGLAMHGQG 315
+ R L ++DM + G L++ L + M + + ++ +HG
Sbjct: 287 AEMKRLSVTLEDKHHACVVDMLGRAGLLQEAFDLIKEMPSPPSDGVWGALLLACKIHGNM 346
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLS 342
+ + S +L+ LEP+ Y ++S
Sbjct: 347 ELGKTAASNLLQ--LEPNHTGYYVLMS 371
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/600 (36%), Positives = 333/600 (55%), Gaps = 34/600 (5%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+ + C+ L +++HA G + F A++L+ A + G + A +F +I
Sbjct: 112 LFRACRALRPLRQLHAFAATSGAATDRFTANHLM--LAYADLGDLTAARELFERIPRRNV 169
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFER------------------------------- 125
+N L G++K + A L++EM ER
Sbjct: 170 MSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRRE 229
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G+ PD F ++F+ CA L+ + G Q+H +V + G + D+ V +SL +MY +C ++
Sbjct: 230 GMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 289
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
A+ + + S+ S + IIA NG L+ F M + + VS +S+C+
Sbjct: 290 EAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGV-AADVVTFVSAISSCSD 348
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L AL G+ HG +++ V V T L+ MY +CGCL +F S M
Sbjct: 349 LAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 408
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
IS HG G++A+ +F +M+ G EP DV ++ +L ACSH+GL EG+ CF+ M Y
Sbjct: 409 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 468
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAA 425
+ P+V+HY CVVDL+GR+G L EA LI SMP+ + V+W++LLSA K N ++ E A
Sbjct: 469 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIA 528
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
K + +++ H + YVLLSN+ A ++RW DV+++R M + + PG S VE+ +++F
Sbjct: 529 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 588
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
+ D SHP I E + +M +++ GYSPD+S VL D++++EK L HS+KLAIAF
Sbjct: 589 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 648
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
A + L +G PIR+ +NLR+C+DCH KL+S + REI+VRD RFH FKDG CSCRDYW
Sbjct: 649 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F LF+AC L+ L+ Q+H G D F N L+ Y + A +F+++
Sbjct: 109 FSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWR--------------------- 230
+++V SW+ + + NG KLF EM N W
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225
Query: 231 -------PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
P+E L SV C L + G+ H ++R+ ++ V +SL MY++CGC
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 285
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L++G + RM+ ++ + +I+G +G + AL F M G+ D V +V +S+
Sbjct: 286 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 345
Query: 344 CSHAGLVNEGLLCFDR-MKLEY-RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
CS + +G + MK ++VP + C+V + R G LG++ E + +
Sbjct: 346 CSDLAALAQGQQIHGQVMKAGVDKVVPVMT---CLVHMYSRCGCLGDS-ERVFFGYCGSD 401
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLSNMYA 447
+ +++SA H + G+ A + Q+ PSD L+ +YA
Sbjct: 402 TFLLSAMISAYGFHGH---GQKAIELFKQMMNGGAEPSDVTFLALLYA 446
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 212 LWSECLKLFGEMNNE-KCWRPEESI--LVSVLSACTH--------LGALDLGKCTHG-SL 259
LWS+ +LF + + RP + + A T L DLG T L
Sbjct: 101 LWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 160
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I NV+ L Y+K G L LF M ++ T++ M++GL G +E+L
Sbjct: 161 FERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESL 220
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGL-------------- 354
F +M REG+ PD+ V C+ HA +V GL
Sbjct: 221 GFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 280
Query: 355 ---LCFDRMKLEYRIVPTVQHYGCVVDLMGRA--GMLGEALE---LIQSMPIQQNDVVWR 406
C + R++P++ C + GR G ALE +++S+ + + V +
Sbjct: 281 MRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFV 340
Query: 407 SLLSA 411
S +S+
Sbjct: 341 SAISS 345
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 323/524 (61%), Gaps = 5/524 (0%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A ++F I+E + + T++ G + EAL ++ M GV D +TF ++ AC
Sbjct: 230 ARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGA 289
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L AL+EG QIH ++ + +E ++FV ++L++MY KC V A A+F++M K++ SW+A+
Sbjct: 290 LAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAM 349
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I + NG E +++F EM + +P++ L SV+S+C +L +L+ G H + +
Sbjct: 350 IVGYGQNGCGEEAVRVFSEMQRDGI-KPDDFTLGSVISSCANLASLEEGAQFH--CLALV 406
Query: 264 SALN--VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
S L V V +L+ +Y KCG +E LF M+ Q++++ ++ G A G+ KE + +
Sbjct: 407 SGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDL 466
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F +ML +G++PD V ++GVLSACS +GLV++G F M+ ++ IVP HY C++DL
Sbjct: 467 FEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYS 526
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
R+G L +A E I+ MP + W +LLSA ++ ++EIG+ AA+NL +++ +P+ YVL
Sbjct: 527 RSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVL 586
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
L +M+A W DVAK+R M + + + PG S ++ KV+ F + D+SHP IYE
Sbjct: 587 LCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEK 646
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + ++ EGY PD+S VL DV + EK L HS+KLAIAF LI + PIRI +N
Sbjct: 647 LQWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKN 706
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH TK IS I R+I+VRD RFH+F +G CSC D+W
Sbjct: 707 LRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 36/356 (10%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKL 144
+F + + A +N L+ GF + A Y + E GV P T + + L
Sbjct: 99 LFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASAL 158
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK-------------------------- 178
G Q+H + ++GF F + L++MY K
Sbjct: 159 GDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMI 218
Query: 179 -----CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
C+ V A A+F+ ++++ +W+ ++ NGL SE L +F M E ++
Sbjct: 219 TGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVG-IDQ 277
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
S+L+AC L AL+ GK H + R NV V ++L+DMY KC + +FR
Sbjct: 278 YTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRR 337
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M K ++++ MI G +G G+EA+ +FSEM R+G++PDD V+S+C++ + EG
Sbjct: 338 MMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEG 397
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
F + L + P V +V L G+ G + +A L M + V W +L+
Sbjct: 398 AQ-FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALV 451
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 135/256 (52%), Gaps = 7/256 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C LEE K++HA++ + + N F S LV S S+ A ++FR++
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDM--YSKCRSVRLAEAVFRRMM 339
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ + EEA+ +++EM G++PD+FT ++ +CA L +L+EG Q
Sbjct: 340 WKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQ 399
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V N+L+ +YGKC +E A +F +M SW+A++ +A G
Sbjct: 400 FHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGK 459
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M + K +P+ + VLSAC+ G +D G+ S+ ++ + +
Sbjct: 460 AKETIDLFEKMLS-KGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY 518
Query: 272 TSLIDMYVKCGCLEKG 287
T +ID+Y + G L++
Sbjct: 519 TCMIDLYSRSGWLKQA 534
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 312/492 (63%), Gaps = 3/492 (0%)
Query: 116 LFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM 175
L Y+ M V P +F + ++CA + G H + K+GFE D+ +Q L++
Sbjct: 15 LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74
Query: 176 YGKCEKVEFASAIFKQMDQKSVAS--WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
Y K VE A +F M +++ S W+ +I+A+ G + + +F +M +E +P E
Sbjct: 75 YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENV-KPTE 133
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+VS+LSAC HLGALD+G+ HG + ++V++ +LIDMY KCG LE + +F
Sbjct: 134 VTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHG 193
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++ K ++ +I GL M+G+G+EA++ F M +EG++PD V +VG+LS CSH+GL++ G
Sbjct: 194 LSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAG 253
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
F M Y + P V+HYGC+VDL+GRAG L EALELI++MP++ N +V SLL A +
Sbjct: 254 QRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQ 313
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
+H + ++GE + L +++ +YV LSN+YA RW DV R M +G++++PG
Sbjct: 314 IHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGC 373
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S +EV V++FV+ D SHP + I + ++ +LK +G+ P+ + VL D++E+EK
Sbjct: 374 SSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKELKGQGHVPNTANVLHDIEEEEKEGA 433
Query: 534 LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHR 593
++ HS+++A+AF L+ G IR+ +NLR C+DCH+ KLIS ++REIIVRDRKRFH
Sbjct: 434 IRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDCHSAMKLISNAFKREIIVRDRKRFHH 493
Query: 594 FKDGTCSCRDYW 605
F++G+CSC DYW
Sbjct: 494 FRNGSCSCNDYW 505
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL++C E + H ++K GF ++ + L+ A G ++ A ++F + E
Sbjct: 36 ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA--KHGYVEEARNLFDNMTE 93
Query: 94 --PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +NT+I +V+ EF A+ ++ +M V+P T +L ACA L AL G
Sbjct: 94 RNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGE 153
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IHG++ + D+ + N+LI+MY KC +E A +F + +K++ W++II NG
Sbjct: 154 WIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNG 213
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + F M E +P+ V +LS C+H G L G+ + S + + L VE
Sbjct: 214 RGEEAIAAFIVMEKEGI-KPDGVTFVGILSGCSHSGLLSAGQ-RYFSEMLGVYGLEPGVE 271
Query: 272 --TSLIDMYVKCGCLEKGLCLFRMMADK 297
++D+ + G L++ L L R M K
Sbjct: 272 HYGCMVDLLGRAGYLKEALELIRAMPMK 299
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/613 (36%), Positives = 340/613 (55%), Gaps = 33/613 (5%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+L R+ EQ T + ++ L + NP + + G +
Sbjct: 448 QLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKE 507
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F+++ + + +I GFV+ E EAL L E+ G P + +F + ACA
Sbjct: 508 AKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACAN 567
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS----------------- 186
+ ++ G IH K G + + +V N LI+MY KC VE S
Sbjct: 568 IGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSL 627
Query: 187 --------------AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
+F++M ++ V SW+AII+A+ G L LF +M + +P
Sbjct: 628 ISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDML-ARGIKPN 686
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+ + S+LSAC +LGA+ LG+ H + + + V SLI MY KCG E G C+F
Sbjct: 687 QLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFE 745
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M + +T++ ++ G A +G GKEA+ IF +M EG+ PD + ++GVL ACSHAGLV+E
Sbjct: 746 EMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDE 805
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G F+ M +Y I+P V HY C+VDL+GRAG L EA LI++MP++ + V+W +LL A
Sbjct: 806 GWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGAC 865
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
++H N+E+G+ A+ LFQ+ + YVLLSN++A W VA+IR M +GL + PG
Sbjct: 866 RIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPG 925
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S ++V K++ FV+ DR+H + IY + + + GY PD + VL DV+E++K+
Sbjct: 926 ISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQN 985
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L HS+KLA+ F ++ GSPI+I +NLR+C DCHT+ K +S + R+II+RD RFH
Sbjct: 986 ELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFH 1045
Query: 593 RFKDGTCSCRDYW 605
F+DG+CSC DYW
Sbjct: 1046 HFRDGSCSCGDYW 1058
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 133/279 (47%), Gaps = 13/279 (4%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
H M A +F Q+ E + + +I G+V ++ EA ++ +M PD F
Sbjct: 307 HCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVV 366
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ A L L+ + K G+E D+ V ++++N Y + ++ A F+ M +++
Sbjct: 367 VLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERN 426
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL--VSVLSACTHLGALDLGKC 254
SW+ +IAA A G + ++L+ + PE+++ ++++A +G + +
Sbjct: 427 EYSWTTMIAAFAQCGRLDDAIQLYERV-------PEQTVATKTAMMTAYAQVGRIQKARL 479
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
++ NV+ ++I Y + G L++ LF+ M K +++ MI+G + +
Sbjct: 480 IFDEILNP----NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEE 535
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+EAL + E+ R G P D + LSAC++ G V G
Sbjct: 536 SREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 154/384 (40%), Gaps = 95/384 (24%)
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F NT I+ + EEA ++NEM +R V N ++ G +G
Sbjct: 172 FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWN--------------SMINGYSQNGK 217
Query: 157 VFKVGFECDLFVQNS------LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
V + D FV + L+ Y K ++E A +F+ M +++V SW+A+I+ + N
Sbjct: 218 VDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQN 277
Query: 211 GLWSECLKLFGEMNNEK-------------CWRPEES----------------------- 234
G KLF EM + C+R E+
Sbjct: 278 GDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYV 337
Query: 235 -------------------------ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
I V VLSA T L L+L I+ +V+
Sbjct: 338 HISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVV 397
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +++++ Y + G L+ + F M ++ + +++ MI+ A G+ +A+ ++ +
Sbjct: 398 VGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV---- 453
Query: 330 LEPDDVVY--VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
P+ V +++A + G + + L FD + + P V + ++ + GML
Sbjct: 454 --PEQTVATKTAMMTAYAQVGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLK 506
Query: 388 EALELIQSMPIQQNDVVWRSLLSA 411
EA +L Q MP+ +N W ++++
Sbjct: 507 EAKDLFQKMPV-KNSASWAAMIAG 529
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 48/283 (16%)
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ LF N+ I G+ +VE A +F +M Q+ V SW+++I ++ NG E LF
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDA 227
Query: 223 M--NNEKCW-----------RPEESILVSVLSACTH-----LGALDLGKCTHGSLIRNIS 264
N + W R EE+ V + T A+ G +G L +N
Sbjct: 228 FVGKNIRTWTILLTGYAKEGRIEEA--REVFESMTERNVVSWNAMISGYVQNGDL-KNAR 284
Query: 265 AL-------NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
L NV S++ Y C + + LF M ++ +++ VMISG E
Sbjct: 285 KLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWE 344
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG--- 374
A +F +M R PD ++V VLSA + GL D ++L + P G
Sbjct: 345 AWDVFVKMCRTVARPDQSIFVVVLSAIT--GL--------DDLELIGSLRPIAIKTGYEG 394
Query: 375 ------CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+++ R G L A+ ++MP ++N+ W ++++A
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAA 436
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 324/572 (56%), Gaps = 7/572 (1%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+K C L F K H+ +K +P+ A L+ + GS++ A +F ++
Sbjct: 120 VKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNV--YTELGSLEEAHKVFEEVPLK 177
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ + +I+G + E L++ M G E D F L +AC + A KEG H
Sbjct: 178 NSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFH 237
Query: 155 GHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
G K F + + F+Q SL++MY KC ++FA +F+++ + V WSAIIA A NG
Sbjct: 238 GLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRA 297
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E + +F +M + P S++ AC+ LG+L G+ HG +IRN L+V TS
Sbjct: 298 LESISMFRQMLADSV-TPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTS 356
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
IDMY KCGC+ +F + +K ++S MI+G MHG EAL++F EM P+
Sbjct: 357 FIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPN 416
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V +V VLSACSH+G + EG F M +Y I P +HY C+VDL+GRAG + EAL I
Sbjct: 417 SVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFI 476
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+MP + W +LL A ++H E+ E AK L + S YV+LSN+YA W
Sbjct: 477 NNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWE 536
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
V K R +M KG+++ GF+ +E+ K+Y F S+DR I + + ++ +++ G
Sbjct: 537 MVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELG 596
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y PD+ VL DVD++ K+E L GHS+KLAI F L++ +G PIRI +N+R+C DCHT +K
Sbjct: 597 YVPDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASK 656
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS+I R+II+RD KRFH +DG CSC DYW
Sbjct: 657 FISLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 185/399 (46%), Gaps = 6/399 (1%)
Query: 18 EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
EP P ++ R + L++ + K L +++A +L + + A
Sbjct: 2 EPNPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFG--AYIQ 59
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
GS+ A F I +NT++ K F + L L+ M + G D+F
Sbjct: 60 LGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFA 119
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
KAC L + H K+ E D +V +L+N+Y + +E A +F+++ K+
Sbjct: 120 VKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNS 179
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
W +I H + +LF M + + ++ ++ AC ++ A GK HG
Sbjct: 180 VIWGVMIKGHLNFSEEFGVFELFSRMRRSG-FELDPFVVEGLIQACGNVYAGKEGKTFHG 238
Query: 258 SLI-RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
I +N N ++TSL+DMY+KCG L+ L LF ++ + + +S +I+G A +G+
Sbjct: 239 LCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRAL 298
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
E++S+F +ML + + P+ V + ++ ACS G + +G M + + V++Y
Sbjct: 299 ESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM-IRNGVELDVKNYTSF 357
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+D+ + G + A + +P ++N W ++++ +H
Sbjct: 358 IDMYAKCGCIVTAYRVFCQIP-EKNVFSWSTMINGFGMH 395
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 335/575 (58%), Gaps = 7/575 (1%)
Query: 35 LTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++IL C +L K +H +K + + LV+ A G A + F ++
Sbjct: 434 MSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYA--KCGFFTAALTTFNRM 491
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N+LI G+ + + A+ ++ ++ + PD T + ACA L L +G
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASN 210
IHG + K+GFE D V+N+LI+MY KC + A +F + D K +W+ IIAA+ N
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G E + F +M E + P VSVL A +L A G H +I+ N +V
Sbjct: 612 GHAKEAISSFHQMRLEN-FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLV 670
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SLIDMY KCG L+ LF M K ++++ M+SG A+HG G A+++FS M +
Sbjct: 671 GNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D V +V VLSAC HAGLV EG F M +Y I P ++HY C+VDL+GRAG+ E L
Sbjct: 731 QIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETL 790
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
I+ MP++ + VW +LL + ++H N+++GE+A +L ++ +P+ +V+LS++YA++
Sbjct: 791 GFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSG 850
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
RW D K R++M GL ++PG S VE+ KV+ F D+SHP ++++ + + + +++
Sbjct: 851 RWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL++V+E++K L HS++LAI FAL++ GS I+I +NLR+C DCHT
Sbjct: 911 KIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHT 970
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I R IIVRD RFH F+DG CSC DYW
Sbjct: 971 TTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/604 (24%), Positives = 264/604 (43%), Gaps = 66/604 (10%)
Query: 13 LTQPEEPPKGPE----LNLRLKEQECLTILK----TCK--NLEEFKKVHAHVLKWGFFWN 62
L+Q E+P + + + L E +++L CK N+E + +H +V + F +
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--S 262
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
++ L+ S G +D A +F Q+ + + T++ G+ F E L L+++M
Sbjct: 263 SAVSNGLIDL--YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
V + + + F A A+ L++G +IHG + + D+ V L+ MY KC +
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E A +F + + + +WSAIIAA G E L LF EM N+K +P L+S+L A
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK-MKPNRVTLMSILPA 439
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C L L LGK H ++ ++ T+L+ MY KCG L F M+ + +T+
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I+G A G A+ +F ++ + PD VGV+ AC+ +++G C + +
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIV 558
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ ++D+ + G L A L +++V W ++ A+ + +
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII-AAYMQNGHAKEA 617
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL--------NQSPGFS 474
I++ + ++ + HP+ +S + A A +A R MA N G S
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAY----LAAFREGMAFHACIIQMGFLSNTLVGNS 673
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQ--MEWQLKFEGYSPDISQVLRDVDEDEKRE 532
L+++ K + D S ++ EM H+ + W GY+
Sbjct: 674 LIDMYAKCGQL---DYSEKLFN---EMDHKDTVSWNAMLSGYA----------------- 710
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
+ GH + A AL L Q S ++I D ++ ++S ++ RK FH
Sbjct: 711 -VHGHGDR---AIALFSLMQESQVQI--------DSVSFVSVLSACRHAGLVEEGRKIFH 758
Query: 593 RFKD 596
D
Sbjct: 759 SMSD 762
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L +CK+L ++HA ++ GF + ++L+ +L H D A S+F P
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGF-KHHHSITHLINLYSLFH--KCDLARSVFDSTPNPSR 94
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N++IR + + ++ EAL +Y M E+G+EPD +TF + KAC L+EG+ HG
Sbjct: 95 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGE 154
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ + G E D+F+ L++MY K ++ A +F +M ++ V +W+A+IA + + E
Sbjct: 155 IDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ F M P L+++ L ++L + HG + R + V LID
Sbjct: 215 VDFFRSMQLVGV-EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLID 271
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+Y KCG ++ +F M D+ +++ M++G A +G E L +F +M
Sbjct: 272 LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 13/280 (4%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+P L +C L L +QIH + GF+ + + LIN+Y K + A ++F
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL-- 251
S W+++I A+ + ++E L+++ M EK P++ VL ACT GAL+L
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMV-EKGLEPDKYTFTFVLKACT--GALNLQE 147
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G HG + R +V + L+DMY K G L++ +F M + + ++ MI+GL+
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQ 207
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
EA+ F M G+EP V + + + LC +R +
Sbjct: 208 SEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE---LCRSIHGYVFRRDFSSA 264
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++DL + G + A + M + Q+DV W ++++
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/484 (43%), Positives = 303/484 (62%), Gaps = 29/484 (5%)
Query: 145 QALKEGMQIHGHVFK-------------VGFECDLFVQ---------NSLINMYGKCEKV 182
QA+K G+ HG+V + C LF + +++I Y
Sbjct: 3 QAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY-----F 57
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E A +F+ M +K + +W+++I A NG +E L L+ M +E P+ +VS+LSA
Sbjct: 58 ESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGV-EPDGFTMVSLLSA 116
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLT 301
C L L LG+ H +++ N+ +L+D+Y KCG + + +F M ++ ++
Sbjct: 117 CAELATLVLGRRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVS 176
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ +I GLA++G GKEAL F +M REGL P ++ +VGVL ACSH G+VNEG F RMK
Sbjct: 177 WTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMK 236
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
+Y IVP ++HYGC+VDL+GRAG+L EA + IQ MP+Q N V+WR+LL A +H +L +G
Sbjct: 237 EQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLG 296
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
A L Q+ DYVLLSN+YA QRW DV ++R M S+G+ ++PG+SLVE+
Sbjct: 297 AFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLVELGNH 356
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V++FV DR+HP + IY+M+ +M +LK GY P + VL D++E+EK L HS+K+
Sbjct: 357 VHEFVMGDRTHPQSEAIYKMLVEMAMKLKLAGYVPHTANVLADIEEEEKESALFYHSEKI 416
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
AIAF LI+ G+PIRI +NLR+C DCH KLIS ++ER+I+VRD RFH F+DG+CSC
Sbjct: 417 AIAFMLINTLPGTPIRIIKNLRVCADCHFAIKLISKVFERDIVVRDCSRFHHFRDGSCSC 476
Query: 602 RDYW 605
RDYW
Sbjct: 477 RDYW 480
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/624 (35%), Positives = 340/624 (54%), Gaps = 55/624 (8%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL C +L+ + K+VH + ++ G F + F + L+ A + G M+ A +F +
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALID--AYAKCGLMENAVKVFNMM 326
Query: 92 DEPGAFDFNTLIRGFVKEVEFE-----------------------------------EAL 116
+ +N ++ G+ + FE EAL
Sbjct: 327 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 386
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK----------VGFECDL 166
L+ +M G P+ T ++ ACA L A +G +IH + K G + DL
Sbjct: 387 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 446
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V N+LI+MY KC + A +IF +++++V +W+ +I HA G ++ LKLF EM
Sbjct: 447 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 506
Query: 225 NEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKC 281
+E P + +L AC HL A+ +GK H ++R+ + V LIDMY KC
Sbjct: 507 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKC 566
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +F M+ K ++++ M++G MHG+G EAL IF +M + G PDD+ ++ VL
Sbjct: 567 GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 626
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
ACSH G+V++GL FD M +Y + P +HY C +DL+ R+G L +A ++ MP++
Sbjct: 627 YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPT 686
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
VVW +LLSA +VH N+E+ E A L ++N+ + Y L+SN+YA A RW DVA+IR
Sbjct: 687 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 746
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M G+ + PG S V+ + F DRSHP IY ++ + ++K GY P+ +
Sbjct: 747 MKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFA 806
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DVDE+EK L HS+KLA+A+ L+ S G PIRI +NLR+C DCH+ IS I +
Sbjct: 807 LHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDH 866
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD RFH FK+G+CSC YW
Sbjct: 867 EIVVRDPSRFHHFKNGSCSCGGYW 890
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 28/352 (7%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW---------------NPFCASNLVATCALSHW-- 78
++LK CK+ ++H ++ G PF + + T ++ +
Sbjct: 42 SLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLA 101
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G+ DYA + ++ A +N LIR +K+ + A+ + M G PD+FT P +
Sbjct: 102 CGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHV 161
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS- 196
KAC +L + + G HG + GFE ++F+ N+L+ MY +C +E AS IF ++ Q+
Sbjct: 162 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 221
Query: 197 --VASWSAIIAAHA-SNGLWSECLKLFGEMN---NEKCWRPEESI--LVSVLSACTHLGA 248
V SW++I++AH S+ W+ L LF +M +EK I +V++L AC L A
Sbjct: 222 DDVISWNSIVSAHVKSSNAWTA-LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 280
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
+ K HG+ IRN + +V V +LID Y KCG +E + +F MM K ++++ M++G
Sbjct: 281 VPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 340
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+ G + A +F M +E + D V + V++ S G +E L F +M
Sbjct: 341 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 392
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/526 (38%), Positives = 312/526 (59%), Gaps = 8/526 (1%)
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S D IF + E +NT+I G + +EE L + EM ++PD+FT ++
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
A+ + G +IHG + G + D++V +SLI+MY KC +V + +F + ++ S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGIS 307
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W++IIA NGL+ E L+ F +M K +P+ S++ AC HL L LGK HG +
Sbjct: 308 WNSIIAGCVQNGLFDEGLRFFRQMLMAKI-KPKSYSFSSIMPACAHLTTLHLGKQLHGYI 366
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
RN N+ + +SL+DMY KCG + +F M + ++++ MI G A+HGQ +A+
Sbjct: 367 TRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAI 426
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F +M EG++ VL+ACSH GLV+E F+ M ++ I P V+HY V DL
Sbjct: 427 ELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDL 479
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG L EA + I M I +W +LLSA +VH N+++ E A + +++ ++ Y
Sbjct: 480 LGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAY 539
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
+LL+N+Y+ A+RW + AK R M G+ ++P S +EV KVY F++ D SHP ++ I
Sbjct: 540 ILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIR 599
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
E + + ++ EGY PD S+V DV+E++K+ + HS++LAI F +I+ G IR+
Sbjct: 600 EAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVT 659
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCHT TK IS I REI+VRD RFH FK+GTCSC DYW
Sbjct: 660 KNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 36/346 (10%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+ K+ + +++HA VLK F + + SH + + +F I P A +
Sbjct: 18 SIKSRSQAQQLHAQVLK---FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAW 74
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
++IR + ++L + M G+ PD+ FP++ K+CA L L G +HG++ +
Sbjct: 75 KSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIR 134
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFAS--------------------------------A 187
VG + DL+ N+L+NMY K +E +
Sbjct: 135 VGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRK 194
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF+ M +K + SW+ IIA +A NGL+ E L++ EM +P+ L SVL
Sbjct: 195 IFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANL-KPDSFTLSSVLPLIAENV 253
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+ GK HG IR ++ V +SLIDMY KC + +F ++ ++ ++++ +I+
Sbjct: 254 DISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIA 313
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G +G E L F +ML ++P + ++ AC+H ++ G
Sbjct: 314 GCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLG 359
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 329/574 (57%), Gaps = 8/574 (1%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L C N + E ++VHAH++K + + ++ L+ + + A +F ++ E
Sbjct: 16 LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIIL--YTKCECLGCARHVFDEMRE 73
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +I G+ + EAL L+ +M EP+ FTF + +C + G QI
Sbjct: 74 RNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQI 133
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H H+FK +E +FV +SL++MY K ++ A +F+ + ++ V S +AII+ +A GL
Sbjct: 134 HSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLD 193
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+LF + E S+L+A + L ALD GK H ++R V+++ S
Sbjct: 194 EEALELFCRLQREG-MSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNS 252
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEP 332
LIDMY KCG L +F M + ++++ M+ G + HG+G E + +F M E ++P
Sbjct: 253 LIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKP 312
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D V ++ VLS CSH GL ++GL FD M I ++HYGCV+DL+GRAG + EA E
Sbjct: 313 DSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFE 372
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI+ MP + +W SLL A +VH N IGE L +I + +YV+LSN+YA A R
Sbjct: 373 LIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGR 432
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R M K + + PG S +E+ + ++ F + DRSHP + ++ + ++ + K
Sbjct: 433 WEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFKE 492
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD S VL DVDE++K + L GHS+KLA+AF LI S+G P+R+ +NLR+C DCH +
Sbjct: 493 SGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHNF 552
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S +Y R++ +RD+ RFH G CSC DYW
Sbjct: 553 AKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT L L+ K+VH+HVL+ + ++L+ S G+++YA IF +
Sbjct: 219 LTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDM--YSKCGNLNYARKIFNNMPVR 276
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQI 153
+N ++ G+ K + E + L+ M E V+PD+ TF A+ C+ +G+++
Sbjct: 277 TVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEM 336
Query: 154 HGHVFKVGFECDLFVQN--SLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ G E + +++ +I++ G+ +VE A + K+M + + A W +++ A
Sbjct: 337 FDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGA 392
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 329/573 (57%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++ T N+ + + +H + K+GF + ++ L+ S ++ +F +
Sbjct: 157 SLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSR--CVEDGNKVFEAMT 214
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P +N L+ GF ++ +M G +P+ FTF ++ ++C+ L + G Q
Sbjct: 215 NPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQ 274
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H H+ K + D FV +L++MY K +E A F ++ + + SW+ II+ +A
Sbjct: 275 VHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQ 334
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ +K F +M E +P E L S LS C+H+ L+ G+ H ++ ++ V +
Sbjct: 335 AEKAVKYFRQMQREGI-KPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGS 393
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+D+Y KCGC+E +F+ + + ++++ +ISG + HGQG++AL F ML EG+ P
Sbjct: 394 ALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMP 453
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D+ ++GVLSACS GLV EG FD M Y I P+++HY C+VD++GRAG E
Sbjct: 454 DEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIF 513
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ M + ++W ++L A K+H N++ GE AAK LF++ S Y+LLSN++A RW
Sbjct: 514 IEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRW 573
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DV IR M S+G+ + PG S VEV +V+ F+SQD SHP IY + ++ L
Sbjct: 574 DDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSI 633
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P VL +V EK E L HS++LA++FAL+ + PIRI +NLR+C DCH +
Sbjct: 634 GYVPKTEVVLHNVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFM 693
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I +EI+VRD +RFH FK GTCSC+D W
Sbjct: 694 KLISDITNQEIVVRDIRRFHHFKRGTCSCQDRW 726
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 191/389 (49%), Gaps = 20/389 (5%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+LK C N L E K +HA L+ G + F +LV S G++ A +F +I
Sbjct: 56 TVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDM--YSKCGTVYDALKVFTKIR 113
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P ++ +I G ++ +EA L++ M +G P+ FT +L + L+ G
Sbjct: 114 NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQS 173
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IHG + K GFE D V N LI MY K VE + +F+ M + SW+A+++ +
Sbjct: 174 IHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQT 233
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++F +M E ++P +SVL +C+ L + GK H +I+N S + V T
Sbjct: 234 CGRGPRIFYQMLLEG-FKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY K CLE F + ++ +++V+ISG A Q ++A+ F +M REG++P
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKP 352
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG------CVVDLMGRAGML 386
++ LS CSH + G + + + H+G +VDL G+ G +
Sbjct: 353 NEYTLASCLSGCSHMATLENG-------RQLHAVAVKAGHFGDIFVGSALVDLYGKCGCM 405
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVH 415
A + + + I ++ V W +++S H
Sbjct: 406 EHAEAIFKGL-ISRDIVSWNTIISGYSQH 433
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 132/265 (49%), Gaps = 1/265 (0%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
M+ A +F + E +N L+ G+ + + ++ L L+ +M E + FT + K
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA +L+EG +H + G E D F+ SL++MY KC V A +F ++ V +W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
SA+I G E +LF M K RP + L S++S T++G L G+ HG +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLM-RRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ + +V LI MY+K C+E G +F M + ++++ ++SG
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239
Query: 321 IFSEMLREGLEPDDVVYVGVLSACS 345
IF +ML EG +P+ ++ VL +CS
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCS 264
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+E A +F M +K+ SW+A++ +A G + LKLF +M E + + L +VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMK-ECETKFSKFTLSTVLK 59
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C + G+L GK H +R+ ++ + SL+DMY KCG + L +F + + +
Sbjct: 60 GCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+S MI+GL G G+EA +F M R+G P+ ++S ++ G + G
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYG 171
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
CL+ LE +++HA +K G F + F S LV G M++A +IF+ +
Sbjct: 360 CLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDL--YGKCGCMEHAEAIFKGLIS 417
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT+I G+ + + E+AL + M G+ PD TF + AC+ + ++EG +
Sbjct: 418 RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKR 477
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
+S+ +YG S+ ++ ++ G +
Sbjct: 478 F---------------DSMSKIYGI---------------NPSIEHYACMVDILGRAGKF 507
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+E EMN P I +VL AC G +D G+
Sbjct: 508 NEVKIFIEEMN----LTPYSLIWETVLGACKLHGNVDFGE 543
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 323/576 (56%), Gaps = 13/576 (2%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK L +F +++HA + GF + + + L + D DE
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI-----LDFYSKHDRVLETRMLFDE 310
Query: 94 PGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
DF N +I + + ++E +L + EM G + NF F + A L +L+ G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H + L V NSL++MY KCE E A IFK + Q++ SW+A+I+ +
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL LKLF +M R ++S +VL A +L LGK H +IR+ + NV
Sbjct: 431 GLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ L+DMY KCG ++ + +F M D+ ++++ +IS A +G G+ A+ F++M+ GL
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD V +GVL+ACSH G V +G F M Y I P +HY C++DL+GR G EA
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARA 449
+L+ MP + ++++W S+L+A ++H N + E AA+ LF + + YV +SN+YA A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
W V ++ M +G+ + P +S VEV K++ F S D++HP D I I+++ ++
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
+ EGY PD S V++DVDE K E LK HS++LA+AFALI +G PI + +NLR C DCH
Sbjct: 730 EREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCH 789
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I +REI VRD RFH F +G CSC DYW
Sbjct: 790 AAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 181/392 (46%), Gaps = 32/392 (8%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+L C + +VHA +K GF NPF + V + +D AC +F +I
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + FNTLI G+ K+ + E++ L+ +M + G +P +FTF + KA L G Q
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H GF D V N +++ Y K ++V +F +M + S++ +I++++
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 213 WSECLKLFGEMNNEKC--WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ L F EM +C + ++LS +L +L +G+ H + + + V
Sbjct: 332 YEASLHFFREM---QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SL+DMY KC E+ +F+ + + ++++ +ISG G L +F++M L
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 331 EPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
D + VL A + HA ++ G L V +VD+
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL------------ENVFSGSGLVDM 496
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G + +A+++ + MP +N V W +L+SA
Sbjct: 497 YAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKC 228
N++I+ + K V A +F M ++V +W+ ++ +A N + E KLF +M + C
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN--VIVETSLIDMYVKCGCLEK 286
P+ ++L C + H ++ N + V L+ Y + L+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
LF + +K +T++ +I+G G E++ +F +M + G +P D + GVL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 55/327 (16%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
NLR + T+LK + K++HA +++ G N F S LV A GS+
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA--KCGSIK 504
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F ++ + A +N LI + E A+ + +M E G++PD+ + + AC+
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+++G + ++ +YG K + ++
Sbjct: 565 HCGFVEQGTEYF---------------QAMSPIYGITPKKK---------------HYAC 594
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ NG ++E KL EM E P+E + SVL+AC L + L
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFE----PDEIMWSSVLNACRIHKNQSLAERAAEKLFSM 650
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD---KCQLTYS---------VMISGLA 310
+ S+ ++Y G EK + + M + K YS V S
Sbjct: 651 EKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQ 710
Query: 311 MHGQGKEAL----SIFSEMLREGLEPD 333
H G E + + +E+ REG +PD
Sbjct: 711 THPNGDEIVRKINELTAEIEREGYKPD 737
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 339/581 (58%), Gaps = 6/581 (1%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMDYACSIFR 89
+ L+++ + +++HA +L+ N + ++ ALS ++Y+C +F
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN-FTFPALFKACAKLQALK 148
Q P NT+IR F E L+ + P N + K C K L
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G+QIHG +F GF D + +L+++Y CE A +F ++ ++ SW+ + + +
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 209 SNGLWSECLKLFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
N + L LF +M N+ C +P+ + L AC +LGALD GK H + N +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ + +L+ MY +CG ++K +F M ++ ++++ +ISGLAM+G GKEA+ F+EML
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHYGCVVDLMGRAGM 385
+ G+ P++ G+LSACSH+GLV EG++ FDRM+ E++I P + HYGCVVDL+GRA +
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L +A LI+SM ++ + +WR+LL A +VH ++E+GE +L ++ + DYVLL N
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
Y+ +W V ++R+ M K ++ PG S +E+ V++F+ D SHP + IY+M+ ++
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
Query: 506 EWQLKFEGYSPDISQVLRDVD-EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
QLK GY +I+ L +++ E+EK L+ HS+KLAIAF ++ G+ IR+ +NLR
Sbjct: 491 NQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRT 550
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH + K +S +Y+R +IVRDR RFH FK G+CSC D+W
Sbjct: 551 CVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/604 (37%), Positives = 335/604 (55%), Gaps = 37/604 (6%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK + F ++H K GF +PF + L+A A S MD A +F ++
Sbjct: 126 SLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYA-SCRRIMD-ARLLFDKMC 183
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P A +N +I G+ + +++AL L+ +M ++PD+ + AC L G
Sbjct: 184 HPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRT 243
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI------------------------ 188
IH V G+ D +Q +LINMY C ++ A I
Sbjct: 244 IHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGM 303
Query: 189 -------FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
F QM ++ + WSA+I+ +A + E LKLF EM ++ P++ ++SV+S
Sbjct: 304 VKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSV-PDQITMLSVIS 362
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC+H+GAL H + R+ + V +LIDMY KCG L K +F M K ++
Sbjct: 363 ACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVIS 422
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+S MI+ AMHG A+ +F M +EP+ V ++GVL AC HAGLV EG F M
Sbjct: 423 WSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMI 482
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
E+ I PT +HYGC+VDL RA L +A+ELI++MP N ++W SL+SA +VH E+G
Sbjct: 483 NEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELG 542
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E AAK L ++ H V+LSN+YA+ +RW DV IR M+ KG+++ S +E+ +
Sbjct: 543 EFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQ 602
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V+ F+ DR H D IYE + ++ +LK GY P S +L D++E++K+E + HS+KL
Sbjct: 603 VHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKL 662
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
A+ + LI S IRI +NLR+C DCH++ KL+S +Y+ EI+VRDR RFH G CSC
Sbjct: 663 AVCYGLISRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSC 722
Query: 602 RDYW 605
RDYW
Sbjct: 723 RDYW 726
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 195/398 (48%), Gaps = 46/398 (11%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP---DNFTFPALFKACAK 143
+F QI P N L+R + E+ +FLY+ + R + D F+FP+L KA +K
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNL--RAINAFALDRFSFPSLLKAVSK 133
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+ A G++IHG K+GF D F+Q LI MY C ++ A +F +M +W+ I
Sbjct: 134 VSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMI 193
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I + NG + + L+LF +M + +P+ IL +VLSAC H G L G+ H + N
Sbjct: 194 IDGYCQNGHYDDALRLFEDMRSSD-MKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNG 252
Query: 264 SALNVIVETSLIDMYVKCGCLE------KGLC-------------------------LFR 292
A++ ++T+LI+MY CG ++ GL +F
Sbjct: 253 YAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFD 312
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M ++ + +S MISG A Q +EAL +F EML++ PD + + V+SACSH G + +
Sbjct: 313 QMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQ 372
Query: 353 G---LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
DR + ++D+ + G L +A E+ ++MP ++N + W S++
Sbjct: 373 ANWIHTYVDRSGFGRALSVN----NALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMI 427
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A +H N + + + ++N P+ + +YA
Sbjct: 428 NAFAMHGNADSAIKLFRRMKEVNI-EPNGVTFIGVLYA 464
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/551 (37%), Positives = 325/551 (58%), Gaps = 8/551 (1%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE--ALFLY 119
NP + L+ CA+S GS+ YA +F +I P +N++IRGF + + A+ Y
Sbjct: 429 NPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFY 488
Query: 120 NEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
N M PD +TF L KAC + + + ++HG + + G++ D+ + +LI Y
Sbjct: 489 NHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAG 548
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
+E A +F++M + + SW+++I+ + GL E LK++ +M + LVS
Sbjct: 549 NGLIETAHKVFEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGF-DGFTLVS 607
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
+LS+C H+GAL +G H N+ V +LIDMY KCG L L +F M +
Sbjct: 608 LLSSCAHVGALHMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRD 667
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
T++ MI G +HG+G EA++ F ML G+ P+ + ++G+L CSH GLV EG+ F
Sbjct: 668 VFTWNSMIVGYGVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFH 727
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
M E+ + P ++HYGC+VDL GRAG L EALE+I+S P Q + V+WR+LL + K+H N+
Sbjct: 728 MMSSEFNLKPGIKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNV 787
Query: 419 EIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
EIGE+A +NL Q+ S D VLLS +YA A+ VA++R + S+G+ +PG+S +EV
Sbjct: 788 EIGEMAMRNLVQLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEV 847
Query: 479 ARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEK----RERL 534
+V++FV D+SHP IY + ++ + GY+ + S ++ + + +
Sbjct: 848 GDQVHRFVVDDKSHPDSREIYRKLEEVIHRASLVGYAMEESSLVAAPESNTQEYCWETST 907
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+KLAIA+ L +G+ + I +NLR+C DCH +TK +S ++REIIVRDR RFH F
Sbjct: 908 SYHSEKLAIAYGLARTPEGTSLLIVKNLRVCRDCHNFTKFVSKAFDREIIVRDRVRFHHF 967
Query: 595 KDGTCSCRDYW 605
+ G CSC+++W
Sbjct: 968 RGGHCSCKEFW 978
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/600 (36%), Positives = 333/600 (55%), Gaps = 34/600 (5%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+ + C+ L +++HA G + F A++L+ A + G + A +F +I
Sbjct: 50 LFRACRALRPLRQLHAFAATSGAATDRFTANHLML--AYADLGDLTAARELFERIPRRNV 107
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFER------------------------------- 125
+N L G++K + A L++EM ER
Sbjct: 108 MSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRRE 167
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G+ PD F ++F+ CA L+ + G Q+H +V + G + D+ V +SL +MY +C ++
Sbjct: 168 GMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 227
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
A+ + + S+ S + IIA NG L+ F M + + VS +S+C+
Sbjct: 228 EAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGV-AADVVTFVSAISSCSD 286
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L AL G+ HG +++ V V T L+ MY +CGCL +F S M
Sbjct: 287 LAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 346
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
IS HG G++A+ +F +M+ G EP DV ++ +L ACSH+GL EG+ CF+ M Y
Sbjct: 347 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 406
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAA 425
+ P+V+HY CVVDL+GR+G L EA LI SMP+ + V+W++LLSA K N ++ E A
Sbjct: 407 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIA 466
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
K + +++ H + YVLLSN+ A ++RW DV+++R M + + PG S VE+ +++F
Sbjct: 467 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 526
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
+ D SHP I E + +M +++ GYSPD+S VL D++++EK L HS+KLAIAF
Sbjct: 527 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 586
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
A + L +G PIR+ +NLR+C+DCH KL+S + REI+VRD RFH FKDG CSCRDYW
Sbjct: 587 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F LF+AC L+ L+ Q+H G D F N L+ Y + A +F+++
Sbjct: 47 FSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWR--------------------- 230
+++V SW+ + + NG KLF EM N W
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 231 -------PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
P+E L SV C L + G+ H ++R+ ++ V +SL MY++CGC
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L++G + RM+ ++ + +I+G +G + AL F M G+ D V +V +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 344 CSHAGLVNEGLLCFDR-MKLEY-RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
CS + +G + MK ++VP + C+V + R G LG++ E + +
Sbjct: 284 CSDLAALAQGQQIHGQVMKAGVDKVVPVMT---CLVHMYSRCGCLGDS-ERVFFGYCGSD 339
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLSNMYA 447
+ +++SA H + G+ A + Q+ PSD L+ +YA
Sbjct: 340 TFLLSAMISAYGFHGH---GQKAIELFKQMMNGGAEPSDVTFLALLYA 384
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 212 LWSECLKLFGEMNNE-KCWRPEESI--LVSVLSACTH--------LGALDLGKCTHG-SL 259
LWS+ +LF + + RP + + A T L DLG T L
Sbjct: 39 LWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 98
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I NV+ L Y+K G L LF M ++ T++ M++GL G +E+L
Sbjct: 99 FERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESL 158
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGL-------------- 354
F +M REG+ PD+ V C+ HA +V GL
Sbjct: 159 GFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 218
Query: 355 ---LCFDRMKLEYRIVPTVQHYGCVVDLMGRA--GMLGEALE---LIQSMPIQQNDVVWR 406
C + R++P++ C + GR G ALE +++S+ + + V +
Sbjct: 219 MRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFV 278
Query: 407 SLLSA 411
S +S+
Sbjct: 279 SAISS 283
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/587 (37%), Positives = 337/587 (57%), Gaps = 23/587 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+++ C + E KV + K WN S GS D A S+F+ + E
Sbjct: 276 VSMYAKCSKMNEANKVFEGIKKKDVVSWNAM-------VTGYSQIGSFDSALSLFKMMQE 328
Query: 94 PG----AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ +I G+ ++ EAL ++ +M G+EP+ T +L CA + AL
Sbjct: 329 EDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLY 388
Query: 150 GMQIHGHVFKVGF-------ECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASW 200
G Q H +V K E DL V N LI+MY KC+ A +IF ++ K+V +W
Sbjct: 389 GKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTW 448
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSL 259
+ +I +A +G ++ LKLF ++ +K +P L L AC LG L LG+ H
Sbjct: 449 TVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYA 508
Query: 260 IRNISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+RN + V+ V LIDMY K G ++ +F M + ++++ +++G MHG+G+EA
Sbjct: 509 LRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEA 568
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F +M + G D + ++ VL ACSH+G+V++G++ F M + I P +HY C+VD
Sbjct: 569 LHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVD 628
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA+ELI++M ++ VVW +LLSAS++H N+E+GE AA L ++ + +
Sbjct: 629 LLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGS 688
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y LLSN+YA A+RW DVA+IR+ M G+ + PG S ++ + F DRSHP + I
Sbjct: 689 YTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQI 748
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y ++ + ++K GY P S L DVD++EK + L HS+KLA+A+ ++ + G PIRI
Sbjct: 749 YNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRI 808
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ IS+I + EI++RD RFH FK G+CSCR YW
Sbjct: 809 HKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 176/392 (44%), Gaps = 60/392 (15%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP 63
TSV S T P P +++L+ CK L K H + GF
Sbjct: 16 TSVHFYSTFTTSPPTIP-------------LISLLRQCKTLINAKLAHQQIFVHGFTEMF 62
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQI--DEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
A C G+ A S+ +++ F +N LIR VK ++ L Y +
Sbjct: 63 SYAVGAYIEC-----GASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQ 117
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G PD++TFP + KAC ++ +L+ G +H V G ++F+ NS++ MYG+C
Sbjct: 118 MQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGA 177
Query: 182 VEFASAIFKQMDQK---SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW--RPEESIL 236
++ A +F ++ ++ + SW++I+AA+ G L++ M N RP+ L
Sbjct: 178 LDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITL 237
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC--------------- 281
V++L AC + AL GK HG +RN +V V +L+ MY KC
Sbjct: 238 VNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKK 297
Query: 282 ----------------GCLEKGLCLFRMMADK----CQLTYSVMISGLAMHGQGKEALSI 321
G + L LF+MM ++ +T+S +I+G A G G EAL +
Sbjct: 298 KDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDV 357
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
F +M GLEP+ V +LS C+ G + G
Sbjct: 358 FRQMQLYGLEPNVVTLASLLSGCASVGALLYG 389
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/598 (36%), Positives = 335/598 (56%), Gaps = 34/598 (5%)
Query: 39 KTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEPGAF 97
K KN + + +H H +K +PF A L+ C +++ +D+A +FR P +
Sbjct: 35 KNRKNPKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNY---IDHAIKLFRCTQNPNVY 91
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +LI GFV + +A+ L+ +M + V DN+ A+ KAC +AL G ++HG V
Sbjct: 92 LYTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLV 151
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K G D + L+ +YGKC +E A +F M ++ V + + +I + G+ E +
Sbjct: 152 LKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAI 211
Query: 218 KLFGEMNNEK--CW----------------------------RPEESILVSVLSACTHLG 247
++F EM CW P E V VLSAC LG
Sbjct: 212 EVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLG 271
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
AL+LG+ H + + +N V +LI+MY +CG +++ LF + K TY+ MI
Sbjct: 272 ALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIG 331
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
GLA+HG+ EA+ +FSEML+E + P+ + +VGVL+ACSH GLV+ G F+ M++ + I
Sbjct: 332 GLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIE 391
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
P V+HYGC+VD++GR G L EA + I M ++ +D + SLLSA K+H N+ +GE AK
Sbjct: 392 PEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKL 451
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
L + +++LSN YA RW A++R +M G+ + PG S +EV +++F S
Sbjct: 452 LSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFS 511
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
D HP IY+ + ++ + KFEGY P L D+D+++K L HS++LAI + L
Sbjct: 512 GDLRHPERKRIYKKLEELNYLTKFEGYLPATEVALHDIDDEQKELALAVHSERLAICYGL 571
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ + +R+ +NLR+C+DCH KLI+ I R+I+VRDR RFH F++G CSC+DYW
Sbjct: 572 VSTEAYTTLRVGKNLRICDDCHAMIKLIAKITRRKIVVRDRNRFHHFENGECSCKDYW 629
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/526 (40%), Positives = 320/526 (60%), Gaps = 12/526 (2%)
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQ 145
F +I +P + G+V+ +L L+ M + D F A A++
Sbjct: 7 FDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVP 66
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMY--GKCEKVEFASAIFKQMDQKSVASWSAI 203
+H + K+GFE + V N++++ Y G +E A +F M ++ V SW+++
Sbjct: 67 DRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSM 125
Query: 204 IAAHASNGLWSECLKLFGEMNNE----KCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
IA +A NG+ +E + L+ +M N KC L +VL AC H GA+ GK H +
Sbjct: 126 IALYAQNGMSAEAIGLYSKMLNVGGGIKC---NAVALSAVLLACAHAGAIQTGKHIHNQV 182
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+R NV V TS++DMY KCG +E FR + +K L++S MI+G MHG+G+EAL
Sbjct: 183 VRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEAL 242
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
IF+EM R GL P+ + ++ VL+ACSHAGL++EG ++ MK E+ I V+HYGC+VDL
Sbjct: 243 EIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDL 302
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG L EA LI+ M ++ + +W +LLSA ++H N+E+ E++ K LF++++ + Y
Sbjct: 303 LGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYY 362
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSN+YA A W DV +IR + ++ + + PG+S E+ K+Y F D+SHP IY
Sbjct: 363 VLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIY 422
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ ++ +++ GY P+ VL D+DE+EK L+ HS+KLA+AFAL++ S I I
Sbjct: 423 SYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSVPRSVIHII 482
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCHT K I+ I EREII+RD +RFH FKDG CSCRDYW
Sbjct: 483 KNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 528
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
++ K +H V++ G N + +++V S G ++ A FR+I E ++ +I
Sbjct: 172 IQTGKHIHNQVVRMGLEENVYVGTSIVDM--YSKCGRVEMASRAFRKIKEKNILSWSAMI 229
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK-VGF 162
G+ +EAL ++ EM G+ P+ TF ++ AC+ L EG + + + G
Sbjct: 230 TGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGI 289
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS-WSAIIAA 206
E + ++++ G+ ++ A ++ K+M K A+ W A+++A
Sbjct: 290 EAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 334
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/586 (37%), Positives = 341/586 (58%), Gaps = 13/586 (2%)
Query: 26 NLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
++RL E +I+K C NL+E + ++H V+K+GF ++ + L+ A S +M
Sbjct: 294 HVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMV--AYSKCMAML 351
Query: 83 YACSIFRQIDEPG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
A +F++ G + +I GF++ EEA+ L++EM +GV P+ FT+ + A
Sbjct: 352 DALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTAL 411
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ ++H V K +E V +L++ Y K KV+ A+ +F +D K + +WS
Sbjct: 412 PVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWS 467
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLI 260
A++A +A G +K+F E+ +P E S+L+ C A + GK HG I
Sbjct: 468 AMLAGYAQAGETEAAIKIFSELTKGGV-KPNEFTFSSILNVCAATTASMGQGKQFHGFAI 526
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
++ ++ V ++L+ MY K G +E +F+ +K ++++ MISG A HGQ +AL
Sbjct: 527 KSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 586
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM + ++ D V ++GV +AC+HAGLV EG FD M + +I PT +H C+VDL
Sbjct: 587 VFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 646
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
RAG L +A+++I +MP +WR++L+A +VH E+G +AA+ + + + YV
Sbjct: 647 SRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYV 706
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSNMYA + W + AK+R M + + + PG+S +EV K Y F++ DRSHP D IY
Sbjct: 707 LLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYM 766
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ + +LK GY PD S VL+D+D++ K L HS++LAIAF LI +GSP+ I +
Sbjct: 767 KLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIK 826
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF-KDGTCSCRDYW 605
NLR+C DCH KLI+ I EREI+VRD RFH F DG CSC D+W
Sbjct: 827 NLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 182/366 (49%), Gaps = 12/366 (3%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +K+GF + ++LV T + ++F ++ E + TLI G+
Sbjct: 117 RQLHCQCIKFGFLDDVSVGTSLVDT--YMKGSNFKDGRNVFDEMKERNVVTWTTLISGYA 174
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ EE L L+ M + G +P++FTF A A+ G+Q+H V K G + +
Sbjct: 175 RNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 234
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLIN+Y KC V A +F + + KSV +W+++I+ +A+NGL E L +F M
Sbjct: 235 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNH 294
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
R ES S++ C +L L + H S+++ + + T+L+ Y KC +
Sbjct: 295 V-RLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDA 353
Query: 288 LCLFRMMADKCQ-LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
L LF+ ++++ MISG + +EA+ +FSEM R+G+ P++ Y +L+A
Sbjct: 354 LRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP- 412
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-W 405
+++ + +K Y TV ++D + G + EA ++ I D+V W
Sbjct: 413 --VISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVDEAAKVFSG--IDNKDIVAW 466
Query: 406 RSLLSA 411
++L+
Sbjct: 467 SAMLAG 472
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 151/338 (44%), Gaps = 20/338 (5%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
YA ++F + + + +L+ GF ++ +EA L+ + G+E D F ++ K A
Sbjct: 49 YAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSA 108
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L G Q+H K GF D+ V SL++ Y K + +F +M +++V +W+
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ +A N L E L LF M +E +P + L G G H +++N
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 227
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V SLI++Y+KCG + K LF K +T++ MISG A +G EAL +F
Sbjct: 228 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 287
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
M + + + ++ C++ ++ ++ +V YG V D R
Sbjct: 288 YSMRLNHVRLSESSFASIIKLCAN----------LKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 383 AGMLG---------EALELIQSMPIQQNDVVWRSLLSA 411
++ +AL L + N V W +++S
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISG 375
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/624 (35%), Positives = 340/624 (54%), Gaps = 55/624 (8%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL C +L+ + K+VH + ++ G F + F + L+ A + G M+ A +F +
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALID--AYAKCGLMENAVKVFNMM 333
Query: 92 DEPGAFDFNTLIRGFVKEVEFE-----------------------------------EAL 116
+ +N ++ G+ + FE EAL
Sbjct: 334 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 393
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV----------GFECDL 166
L+ +M G P+ T ++ ACA L A +G +IH + K G + DL
Sbjct: 394 NLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDL 453
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V N+LI+MY KC + A +IF +++++V +W+ +I HA G ++ LKLF EM
Sbjct: 454 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 513
Query: 225 NEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKC 281
+E P + +L AC HL A+ +GK H ++R+ + V LIDMY KC
Sbjct: 514 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKC 573
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +F M+ K ++++ M++G MHG+G EAL IF +M + G PDD+ ++ VL
Sbjct: 574 GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 633
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
ACSH G+V++GL FD M +Y + P +HY C +DL+ R+G L +A ++ MP++
Sbjct: 634 YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPT 693
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
VVW +LLSA +VH N+E+ E A L ++N+ + Y L+SN+YA A RW DVA+IR
Sbjct: 694 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 753
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M G+ + PG S V+ + F DRSHP IY ++ + ++K GY P+ +
Sbjct: 754 MKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFA 813
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DVDE+EK L HS+KLA+A+ L+ S G PIRI +NLR+C DCH+ IS I +
Sbjct: 814 LHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDH 873
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD RFH FK+G+CSC YW
Sbjct: 874 EIVVRDPSRFHHFKNGSCSCGGYW 897
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 28/352 (7%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW---------------NPFCASNLVATCALSHW-- 78
++LK CK+ ++H ++ G PF + + T ++ +
Sbjct: 49 SLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLA 108
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G+ DYA + ++ A +N LIR +K+ + A+ + M G PD+FT P +
Sbjct: 109 CGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHV 168
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS- 196
KAC +L + + G HG + GFE ++F+ N+L+ MY +C +E AS IF ++ Q+
Sbjct: 169 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 228
Query: 197 --VASWSAIIAAHA-SNGLWSECLKLFGEMN---NEKCWRPEESI--LVSVLSACTHLGA 248
V SW++I++AH S+ W+ L LF +M +EK I +V++L AC L A
Sbjct: 229 DDVISWNSIVSAHVKSSNAWTA-LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 287
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
+ K HG+ IRN + +V V +LID Y KCG +E + +F MM K ++++ M++G
Sbjct: 288 VPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 347
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+ G + A +F M +E + D V + V++ S G +E L F +M
Sbjct: 348 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 399
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 338/577 (58%), Gaps = 10/577 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++L C L K++H+ V++ G + +LV A CA GS+D + +F
Sbjct: 254 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD--GSVDDSRKVFE 311
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
Q+ E + +I +V+ E + EA+ L+ +M + P++F+F ++ KAC L
Sbjct: 312 QMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 371
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q++ + K+G V NSLI+MY + ++E A F + +K++ S++AI+ +A
Sbjct: 372 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 431
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N E LF E+ + + S+LS +GA+ G+ HG L++ N
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFT-FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 490
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ +LI MY +CG +E +F M D+ ++++ MI+G A HG AL +F +ML
Sbjct: 491 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 550
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G +P+++ YV VLSACSH G+++EG F+ M E+ IVP ++HY C+VDL+GR+G+L E
Sbjct: 551 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 610
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I SMP+ + +VWR+LL A +VH N E+G AA+ + + P+ Y+LLSN++A
Sbjct: 611 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 670
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A +W DV KIR M + L + G S +EV +V++F + SHP IY+ + Q+ +
Sbjct: 671 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 730
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K GY PD VL D++E++K + L HS+K+A+AF LI SQ PIRI +NLR+C DC
Sbjct: 731 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 790
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT K IS+ REI+VRD RFH K+G CSC DYW
Sbjct: 791 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 189/401 (47%), Gaps = 14/401 (3%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
EL E +++ C N + ++ V+K G+ C + + G
Sbjct: 139 ELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD 198
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ A +F ++ E + +I F + +A+ L+ +M G PD FT+ ++ A
Sbjct: 199 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 258
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSV 197
C +L L G Q+H V ++G D+ V SL++MY KC V+ + +F+QM + +V
Sbjct: 259 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 318
Query: 198 ASWSAIIAAHASNGLWS-ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+AII A+ +G E ++LF +M + RP SVL AC +L G+ +
Sbjct: 319 MSWTAIITAYVQSGECDKEAIELFCKMISGHI-RPNHFSFSSVLKACGNLSDPYTGEQVY 377
Query: 257 GSLIR-NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
++ I+++N V SLI MY + G +E F ++ +K ++Y+ ++ G A + +
Sbjct: 378 SYAVKLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 436
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYG 374
+EA +F+E+ G+ + +LS + G + +G R +K Y+ + +
Sbjct: 437 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN-- 494
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ + R G + A ++ M +N + W S+++ H
Sbjct: 495 ALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 534
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 16/342 (4%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L+TQ PP ++ LK C+ +N + K VH +++ G + + L++
Sbjct: 34 LMTQQNAPPDLTTYSILLKS--CIRF----RNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 72 TCALSHWGSMDYACSIFRQI-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
S G + A IF + ++ ++ ++ F +A++ + +M E G P+
Sbjct: 88 L--YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 145
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCE-KVEFASAI 188
+ F A+ +AC+ G I+G V K G+ E D+ V LI+M+ K + A +
Sbjct: 146 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKV 205
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F +M ++++ +W+ +I A G + + LF +M + P+ SVLSACT LG
Sbjct: 206 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSG-YVPDRFTYSSVLSACTELGL 264
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKC---GCLEKGLCLFRMMADKCQLTYSVM 305
L LGK H +IR AL+V V SL+DMY KC G ++ +F M + ++++ +
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 306 ISGLAMHGQ-GKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
I+ G+ KEA+ +F +M+ + P+ + VL AC +
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 157/298 (52%), Gaps = 13/298 (4%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M ++ PD T+ L K+C + + + G +H + + G E D V N+LI++Y KC
Sbjct: 35 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94
Query: 182 VEFASAIFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
E A IF+ M +++ + SWSA+++ A+N + + + F +M E + P E +V+
Sbjct: 95 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM-LELGFYPNEYCFAAVI 153
Query: 241 SACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVK-CGCLEKGLCLFRMMADKC 298
AC++ +G+ +G +++ +V V LIDM+VK G L +F M ++
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 213
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
+T+++MI+ A G ++A+ +F +M G PD Y VLSAC+ GL+ G
Sbjct: 214 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 273
Query: 359 R-MKLEYRIVPTVQHYGC-VVDLMGRA---GMLGEALELIQSMPIQQNDVVWRSLLSA 411
R ++L + V GC +VD+ + G + ++ ++ + MP + N + W ++++A
Sbjct: 274 RVIRLGLALDVCV---GCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 327
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/572 (38%), Positives = 337/572 (58%), Gaps = 7/572 (1%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L +F +H ++K+GF + F + LVA A G + A +F +
Sbjct: 160 VLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKC--GHIGVAKVVFDGLYH 217
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+ + + EAL ++++M GV+PD ++ +A + L++G I
Sbjct: 218 RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSI 277
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG V K+G E + + SL Y KC V A + F QM +V W+A+I+ +A NG
Sbjct: 278 HGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHA 337
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E + LF M + +P+ + S + A +G+L+L + + ++ ++ V TS
Sbjct: 338 EEAVNLFHYMISRNI-KPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTS 396
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG +E +F +DK + +S MI G +HGQG EA++++ M + G+ P+
Sbjct: 397 LIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPN 456
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV ++G+L+AC+H+GLV EG F MK ++ IVP +HY CVVDL+GRAG LGEA I
Sbjct: 457 DVTFIGLLTACNHSGLVKEGWELFHCMK-DFEIVPRNEHYSCVVDLLGRAGYLGEACAFI 515
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+PI+ VW +LLSA K++ + +GE AA LF ++ ++ YV LSN+YA + W
Sbjct: 516 MKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWD 575
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
VA +R M KGLN+ G+S++E+ K+ F D+SHP I++ + ++E +LK G
Sbjct: 576 CVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVG 635
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P VL D++ +EK E L HS+++A+A+ LI + G+ +RI +NLR C +CH+ K
Sbjct: 636 FVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIK 695
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS + EREIIVRD RFH FKDG CSC DYW
Sbjct: 696 LISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 157/313 (50%), Gaps = 3/313 (0%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+++ + ++H ++ G N F + LV S+ G + YA +F + P
Sbjct: 61 SLIDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVN--GSSNLGQICYARKLFDEFCYPD 118
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +N +IR + + + + + +Y M GV PD FTFP + KAC +L IHG
Sbjct: 119 VFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHG 178
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ K GF D+FVQN L+ +Y KC + A +F + +++ SW++II+ +A NG E
Sbjct: 179 QIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVE 238
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L++F +M N +P+ LVS+L A T + L+ G+ HG +I+ + SL
Sbjct: 239 ALRMFSQMRNNGV-KPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLT 297
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
Y KCG + F M + ++ MISG A +G +EA+++F M+ ++PD V
Sbjct: 298 AFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSV 357
Query: 336 VYVGVLSACSHAG 348
+ A + G
Sbjct: 358 TVRSAVLASAQVG 370
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/571 (36%), Positives = 327/571 (57%), Gaps = 3/571 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L+ NL+ + +HA V K+GF SN + T + + G + ++ + +
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGF-ETDVAVSNALVTMYMKN-GCVHDGTKLYESMVDR 479
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N + G ++ L ++ M E G P+ +TF ++ +C+ L + G Q+H
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ K + + FV +LI+MY KC +E A F ++ + + +W+ II +A
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGE 599
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ L F +M E +P E L LS C+ L +L+ G+ H + ++ ++ V ++L
Sbjct: 600 KALNYFRQMQQEGV-KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSAL 658
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCGC+E+ LF + + + ++ +I G A +GQG +AL+ F ML EG+ PD
Sbjct: 659 VDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDG 718
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V + G+LSACSH GLV EG F+ M ++ I PTV H C+VD++GR G E + IQ
Sbjct: 719 VTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQ 778
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
M + QN ++W ++L ASK+H+NL +GE AA LF++ S Y+LLSN++A RW D
Sbjct: 779 KMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDD 838
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V ++R+ M+SKG+ + PG S VE +V+ FVS D SHP I+ + +++ +L Y
Sbjct: 839 VKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQY 898
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P VL +V E EK+E L+ HS++LA+ FALI S IRI +NLR+C DCH K
Sbjct: 899 VPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKH 958
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I +EI+VRD +RFH FK+G CSC D+W
Sbjct: 959 ISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 203/392 (51%), Gaps = 14/392 (3%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSH 77
EL+++ E T+LK C KNL++ + +H+ ++K G+ N F LV + C L
Sbjct: 307 ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGL-- 364
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
++D A +F+ I +P ++ LI ++ + EE++ L++ M P+ +T +L
Sbjct: 365 --AID-AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
A L+ G IH V+K GFE D+ V N+L+ MY K V + +++ M + +
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDL 481
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+A ++ G++ L +F M E+ + P +S+L +C+ L + G+ H
Sbjct: 482 ISWNAYLSGLHDCGMYDRPLTIFYHM-LEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+I+N N V T+LIDMY KC LE F ++ + T++V+I+ A QG++
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEK 600
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL+ F +M +EG++P++ G LS CS + EG M + V + +V
Sbjct: 601 ALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
D+ + G + EA L +++ I+++ + W +++
Sbjct: 660 DMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 149/305 (48%), Gaps = 3/305 (0%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
C L+ K++HA K G + F S LV A G ++ A +F + E +N
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA--KCGEIELASKMFIGMPEQNDVTWN 283
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
L+ G+ + + L L+ M E V+ + FT + K CA + LK+G IH + K
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G+E + F+ L++MY KC A +FK + + + WSA+I G E +KLF
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M P + + S+LSA T+ G L G+ H + + +V V +L+ MY+K
Sbjct: 404 HLMRLGDTL-PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK 462
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
GC+ G L+ M D+ ++++ +SGL G L+IF ML EG P+ ++ +
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522
Query: 341 LSACS 345
L +CS
Sbjct: 523 LGSCS 527
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 166/346 (47%), Gaps = 12/346 (3%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
N+ A C S YA + ++ + + LI+G V E ++++L+ EM G+
Sbjct: 155 NVYAKCRYSA-----YARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P+ FT KAC+ AL G Q+H FK+G DLFV ++L+++Y KC ++E AS
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCWRPEESILVSVLSACTH 245
+F M +++ +W+ ++ +A G + LKLF M + KC E L +VL C +
Sbjct: 270 MFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKC---NEFTLTTVLKGCAN 326
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L G+ H +I+ N + L+DMY KCG + +F+ + + +S +
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSAL 386
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
I+ L GQ +E++ +F M P+ +LSA ++ G + G +Y
Sbjct: 387 ITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYG-QSIHACVWKYG 445
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
V +V + + G + + +L +SM + ++ + W + LS
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 157/316 (49%), Gaps = 8/316 (2%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ ++ + CA ++L IHG + K D + SL+N+Y KC +A + +M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ V SW+A+I + G ++ + LF EM NE P E L + L AC+ ALDLGK
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI-MPNEFTLATGLKACSLCMALDLGK 233
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + L++ V ++L+D+Y KCG +E +F M ++ +T++V+++G A G
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQH 372
L +F M+ ++ ++ VL C+++ + +G + +K Y +
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE---GNEF 350
Query: 373 YGC-VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
GC +VD+ + G+ +A+ + +++ + + VVW +L++ E I +L ++
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSE-ESIKLFHLMRL 408
Query: 432 NSHHPSDYVLLSNMYA 447
P+ Y + S + A
Sbjct: 409 GDTLPNQYTICSLLSA 424
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/562 (38%), Positives = 336/562 (59%), Gaps = 7/562 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
++ H V+K G + +LV A C GS+D A +F ++ + +I
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVAD--GSVDDARKVFDRMPVHNVMSWTAIIT 222
Query: 105 GFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+V+ + EA+ L+ EM + V+P++FTF ++ KACA L + G Q++ V K+
Sbjct: 223 GYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLA 282
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
V NSLI+MY +C +E A F + +K++ S++ I+ A+A + E +LF E+
Sbjct: 283 SINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEI 342
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
S+LS + +GA+ G+ H ++++ N+ + +LI MY +CG
Sbjct: 343 EGAGTG-VNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGN 401
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E +F M D ++++ MI+G A HG AL F +ML G+ P++V Y+ VLSA
Sbjct: 402 IEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSA 461
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSH GL++EGL F MK+E+ IVP ++HY CVVDL+GR+G L EA+EL+ SMP + + +
Sbjct: 462 CSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADAL 521
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
V R+ L A +VH N+++G+ AA+ + + + H P+ Y+LLSN++A A +W +VA+IR +M
Sbjct: 522 VLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMK 581
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
+ L + G S +EV KV+KF D SHP IY+ + Q+ ++K GY P VL
Sbjct: 582 ERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLH 641
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
DV+E++K + L HS+K+A+A+ I S PIR+ +NLR+C DCHT K S++ +EI
Sbjct: 642 DVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEI 701
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
++RD RFH FKDGTCSC DYW
Sbjct: 702 VLRDANRFHHFKDGTCSCNDYW 723
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 184/391 (47%), Gaps = 13/391 (3%)
Query: 34 CLT-ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
C T + + C N E K + +LK G+F + C + + G ++ A +F
Sbjct: 44 CFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFD 103
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + + +I F + +A+ L+ +M G PD FT + ACA++ L
Sbjct: 104 RMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSL 163
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKC---EKVEFASAIFKQMDQKSVASWSAIIAA 206
G Q H V K G + D+ V SL++MY KC V+ A +F +M +V SW+AII
Sbjct: 164 GRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITG 223
Query: 207 HA-SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NIS 264
+ S G E ++LF EM + +P SVL AC +L + LG+ + +++ ++
Sbjct: 224 YVQSGGCDREAIELFLEMVQGQV-KPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLA 282
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
++N V SLI MY +CG +E F ++ +K ++Y+ +++ A +EA +F+E
Sbjct: 283 SINC-VGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNE 341
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+ G + + +LS S G + +G R+ L+ + ++ + R G
Sbjct: 342 IEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRI-LKSGFKSNLHICNALISMYSRCG 400
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ A ++ M N + W S+++ H
Sbjct: 401 NIEAAFQVFNEMG-DGNVISWTSMITGFAKH 430
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 134/254 (52%), Gaps = 7/254 (2%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
++ LI + + EA+ + +M E G P+ + F +F+AC+ + + G I G +
Sbjct: 10 WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69
Query: 159 KVG-FECDLFVQNSLINMYGKCE-KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
K G FE D+ V +LI+M+ K +E A +F +M ++V +W+ +I G +
Sbjct: 70 KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ LF +M + P+ L V+SAC +G L LG+ H ++++ L+V V SL+D
Sbjct: 130 VDLFLDMVLSG-YVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVD 188
Query: 277 MYVKC---GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ-GKEALSIFSEMLREGLEP 332
MY KC G ++ +F M ++++ +I+G G +EA+ +F EM++ ++P
Sbjct: 189 MYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKP 248
Query: 333 DDVVYVGVLSACSH 346
+ + VL AC++
Sbjct: 249 NHFTFSSVLKACAN 262
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 116/228 (50%), Gaps = 16/228 (7%)
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+++ + SWSA+I+ +A+N E + F +M E + P E V AC++ + LG
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDM-LECGFYPNEYCFTGVFRACSNKENISLG 61
Query: 253 KCTHGSLIRN-ISALNVIVETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLA 310
K G L++ +V V +LIDM+VK G LE +F M D+ +T+++MI+
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYR 365
G ++A+ +F +M+ G PD GV+SAC+ GL++ G L+ + L+
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181
Query: 366 I-VPTVQHYG-CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ V Y CV D G + +A ++ MP+ N + W ++++
Sbjct: 182 VGCSLVDMYAKCVAD-----GSVDDARKVFDRMPV-HNVMSWTAIITG 223
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/564 (37%), Positives = 330/564 (58%), Gaps = 33/564 (5%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
L+ G +D A + R + LI G+ + EA+ +N M G+EPD T
Sbjct: 180 GLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVT 239
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK------------ 181
L ACA+L+ L G +H V + G + +LI+MY KC
Sbjct: 240 VIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALG 299
Query: 182 --------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
V+ A +F QM+ + + +++++I + G E L LF
Sbjct: 300 RGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFM 359
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M R + +VS+L+AC LGAL G+ H + + + +++ + T+L+DMY+KC
Sbjct: 360 QMRRHDL-RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKC 418
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E+ +F+ M+ + T+S MI+GLA +G GK AL F M +G +P+ V Y+ +L
Sbjct: 419 GRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAIL 478
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+ACSH+ L++EG L F+ M+L + I P ++HYGC++DL+GR+G+L EA++L+++MP+Q N
Sbjct: 479 TACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPN 538
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
V+W S+LSA +VH + + AA++L ++ + YV L N+Y +++W D ++IR
Sbjct: 539 AVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRL 598
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ ++ G+S + VA +V+KF+ DR+HP I M+ ++ +LK GYSP SQ+
Sbjct: 599 MEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQI 658
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
DVDE+EK L HS+K+AIAF LI L+ P+ I +NLR+C DCH+ KLIS I+ R
Sbjct: 659 TVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNR 718
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRDR RFH F+DGTCSC D+W
Sbjct: 719 EIIVRDRSRFHHFRDGTCSCNDFW 742
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 191/444 (43%), Gaps = 78/444 (17%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS----MDYACSIFRQIDEPG 95
T +++ + ++HA ++ G +P AS+L+ + + + YA +F ++
Sbjct: 8 TPRSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRM-PCS 66
Query: 96 AFDFNTLIRG-FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA-LKEGMQI 153
F F+T +R F E L LY M GV D FTF LFK CA+ +A + +
Sbjct: 67 TFLFDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQML 126
Query: 154 HGHVFKVGFECDL-FVQNSLINMY-------------------------------GKCEK 181
H F+ + V N +I+MY K
Sbjct: 127 HAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGL 186
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
++ A + + ++V SW+ +I+ ++ G +E + F M ++ P+E ++ +LS
Sbjct: 187 LDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGI-EPDEVTVIGLLS 245
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK--------------- 286
AC L L G+ H + ++ + +LIDMY KCG + +
Sbjct: 246 ACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQ 305
Query: 287 -------GLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
G C LF M D+ +T++ +I+G G+ +EAL +F +M R
Sbjct: 306 SWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHD 365
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRAGMLGE 388
L D+ V +L+AC+ G + +G +E R+V + G ++D+ + G + E
Sbjct: 366 LRADNFTMVSLLTACASLGALPQGRAL--HACIEQRLVEVDIYLGTALLDMYLKCGRVEE 423
Query: 389 ALELIQSMPIQQNDV-VWRSLLSA 411
A + Q+M ++ DV W ++++
Sbjct: 424 ASLVFQAMSVR--DVHTWSAMIAG 445
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 333/564 (59%), Gaps = 6/564 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L+ K VH +++ GF + + L+ A G + A +F + +N+L
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYA--KCGDLLAAQEVFDTTKCKDSVTWNSL 394
Query: 103 IRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
I G+ + ++E L + M ER +PD+ TF L ++L + +G IH V K G
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMER--KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFG 452
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
FE +L + NSL+++Y KC +++ +F M + SW+ +IA+ + ++
Sbjct: 453 FEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMIN 512
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
EM E P+E+ ++ +L C+ L GK HG + ++ NV + +LI+MY KC
Sbjct: 513 EMRTEGLM-PDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKC 571
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G LE + +F+ M +K +T++ +IS M+G+GK+AL F +M G+ PD V ++ +
Sbjct: 572 GSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFI 631
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
ACSH+G+V EGL FDRMK +Y + P ++HY CVVDL+ R+G+L +A E I SMP++ +
Sbjct: 632 FACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPD 691
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W +LLSA + N I + +K + ++NS YVL+SN+YA +W V +R
Sbjct: 692 ASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNS 751
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +KGL + PG S +E+ ++VY F + D+S +D + +++ + + EGY D+
Sbjct: 752 MKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFA 811
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DV+ED+KR+ L GHS++LAIAF L++ GSP+ + +NLR+C DCHT TK I+ I +R
Sbjct: 812 LHDVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQR 871
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD RFHRFKDG CSC D+W
Sbjct: 872 EILVRDANRFHRFKDGACSCGDHW 895
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 197/402 (49%), Gaps = 14/402 (3%)
Query: 18 EPPK-------GPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV 70
+PPK PE + L L + KN + + VH+ ++ G + + L+
Sbjct: 2 KPPKFCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLI 61
Query: 71 ATCALSHWGSMDYACSIFRQIDEPG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
+ A + S+FR I + +N++IR F +AL Y EM E+ ++P
Sbjct: 62 SKYA--QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQP 119
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D FTFP++ +CA++ L+ G +H H ++GFE DL++ N+LI+MY + ++ A +F
Sbjct: 120 DAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVF 179
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
++M + SW+++I+ + SNG W + L ++ + P+ + SVL AC L A+
Sbjct: 180 EEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG-MVPDCFTMSSVLLACGSLMAV 238
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
G HG + + A +VI+ L+ MY K L + +F MA K +T++ MI G
Sbjct: 239 KEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGY 298
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
A G+ + ++ +F +M+ +G PD + + AC +G + G + T
Sbjct: 299 AQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDT 357
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
V ++D+ + G L A E+ + ++ V W SL++
Sbjct: 358 VA-CNILIDMYAKCGDLLAAQEVFDTTKC-KDSVTWNSLING 397
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 346/606 (57%), Gaps = 42/606 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C LE+ + KV+A + G N S LV ++D A +F DE
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM--YMKCNAIDVAKRLF---DE 296
Query: 94 PGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
GA + N + +V++ EAL ++N M + GV PD + + +C++L+ + G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
HG+V + GFE + N+LI+MY KC + + A IF +M K+V +W++I+A + N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 211 G-------------------------------LWSECLKLFGEMNNEKCWRPEESILVSV 239
G L+ E +++F M +++ + ++S+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
SAC HLGALDL K + + +N L+V + T+L+DM+ +CG E + +F + ++
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++ I +AM G + A+ +F +M+ +GL+PD V +VG L+ACSH GLV +G F
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M + + P HYGC+VDL+GRAG+L EA++LI+ MP++ NDV+W SLL+A +V N+E
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVE 656
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+ AA+ + + YVLLSN+YA A RW D+AK+R M KGL + PG S +++
Sbjct: 657 MAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
K ++F S D SHP NI M+ ++ + G+ PD+S VL DVDE EK L HS+
Sbjct: 717 GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSE 776
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLA+A+ LI ++G+ IRI +NLR+C+DCH++ K S +Y REII+RD RFH + G C
Sbjct: 777 KLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKC 836
Query: 600 SCRDYW 605
SC D+W
Sbjct: 837 SCGDFW 842
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 212/440 (48%), Gaps = 35/440 (7%)
Query: 5 SVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPF 64
+VLH S ++ K LN + + LK CK ++E K H + K G +
Sbjct: 6 NVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVS 65
Query: 65 CASNLVA-TCALSHWGSMDYACSIFRQIDEPGA-FDFNTLIRGFVKEVEFEEALFLYNEM 122
+ LVA +C L S+ +A +F + G F +N+LIRG+ EA+ L+ M
Sbjct: 66 TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
G+ PD +TFP ACAK +A G+QIHG + K+G+ DLFVQNSL++ Y +C ++
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
+ A +F +M +++V SW+++I +A + + LF M ++ P +V V+SA
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 243 CTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C L L+ G+ + + IRN +N ++ ++L+DMY+KC ++ LF
Sbjct: 246 CAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLV 350
+ M S G +EAL +F+ M+ G+ PD + + +S+CS H ++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 351 NEGLLCFD--------------RMKLEYRIV-----PTVQHYGCVVDLMGRAGMLGEALE 391
G +D R +RI TV + +V G + A E
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
++MP ++N V W +++S
Sbjct: 425 TFETMP-EKNIVSWNTIISG 443
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 185/389 (47%), Gaps = 53/389 (13%)
Query: 49 KVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
++H ++K G+ + F ++LV A C G +D A +F ++ E + ++I G
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAEC-----GELDSARKVFDEMSERNVVSWTSMICG 209
Query: 106 FVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+ + ++A+ L+ M + V P++ T + ACAKL+ L+ G +++ + G E
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+ + ++L++MY KC ++ A +F + ++ +A+ + + GL E L +F M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ RP+ ++S +S+C+ L + GK HG ++RN + +LIDMY+KC
Sbjct: 330 DSGV-RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHG----------------------------QG- 315
+ +F M++K +T++ +++G +G QG
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 316 --KEALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCF-----DRMKLEYRIV 367
+EA+ +F M +EG+ D V + + SAC H G ++ + + ++L+ R+
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSM 396
T +VD+ R G A+ + S+
Sbjct: 509 TT------LVDMFSRCGDPESAMSIFNSL 531
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 317/581 (54%), Gaps = 45/581 (7%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN + N +H G MD A S+F + + +N +I G+ + +AL L++
Sbjct: 127 WNAMVSLN-------THLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 121 EMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
M E + PD FT ++ ACA L ++ G Q+H ++ + + V N+LI+ Y K
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239
Query: 180 EKVEFASAIFKQ---------------------------------MDQKSVASWSAIIAA 206
VE A I Q M+ + V +W+A+I
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299
Query: 207 HASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NG E + LF M C P L +VLS C L LD GK H IR++
Sbjct: 300 YEQNGRNDEAIDLFRSMIT--CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V ++I MY + G +F + K +T++ MI LA HGQG+EA+ +F E
Sbjct: 358 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 417
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
MLR G+EPD + YVGVLSACSHAG VNEG +D++K E++I P + HY C+VDL+ RAG
Sbjct: 418 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 477
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ EA E I+ MP++ + + W SLLSA +VH N E+ E+AA+ L I+ ++ Y ++N
Sbjct: 478 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 537
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+Y+ RW D A+I K + + GFS + K++ F + D HP D +Y M +
Sbjct: 538 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAAR 597
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M ++K G+ PD+ VL DVD++ K E L HS+KLAIAF LI + + +R+ +NLR+
Sbjct: 598 MWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRV 657
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CNDCH K IS + +REIIVRD RFH F+DG CSC+DYW
Sbjct: 658 CNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 177/407 (43%), Gaps = 77/407 (18%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ E A + ++ G + F EA+ +M G P FT +
Sbjct: 6 GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVL 65
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+CA QA G ++H V K+G + V NS++NMYGKC E A+ +F++M +SV+
Sbjct: 66 SSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVS 125
Query: 199 -------------------------------SWSAIIAAHASNGLWSECLKLFGEMNNEK 227
SW+A+IA + NGL ++ LKLF M +E
Sbjct: 126 SWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHES 185
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA---------------------- 265
P+E + SVLSAC +LG + +GK H ++R A
Sbjct: 186 SMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENA 245
Query: 266 -----------LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
LNVI T+L++ YVK G +E +F +M ++ + ++ MI G +G+
Sbjct: 246 RRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGR 305
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK-LEYRIVPTVQHY 373
EA+ +F M+ G EP+ VLS C+ L C D K + R + ++
Sbjct: 306 NDEAIDLFRSMITCGPEPNSYTLAAVLSVCA-------SLACLDYGKQIHCRAIRSLLEQ 358
Query: 374 G-----CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ + R+G A + + ++ + W S++ A H
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 405
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 41/291 (14%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
M+ K ++ A +F +M ++ SW+ ++ G + E +K +M + + P +
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADG-FTPTQF 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC----- 289
L +VLS+C A +G+ H +++ V V S+++MY KCG E
Sbjct: 60 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119
Query: 290 --------------------------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
LF M D+ ++++ MI+G +G +AL +FS
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179
Query: 324 EMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
ML E + PD+ VLSAC++ G V G + L + Q ++ +
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYI-LRTEMAYNSQVTNALISTYAK 238
Query: 383 AGMLGEALELI-QSMPIQQNDVVWRSLLSASKVHHNLEIGEI-AAKNLFQI 431
+G + A ++ QSM N + + +LL ++IG++ +A+ +F +
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGY-----VKIGDMESAREMFGV 284
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/587 (36%), Positives = 335/587 (57%), Gaps = 34/587 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH VL+ GF F S LV A G + A +F++++ +NTLI G ++
Sbjct: 168 VHCQVLRLGFGAYAFVGSPLVDMYA--KMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC 225
Query: 110 VEFEEALFLYNEMFER-------------------------------GVEPDNFTFPALF 138
E+A L+ M +R GV D +TF ++
Sbjct: 226 KMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L A +EG QIH ++ + +E ++FV ++L++MY KC + A A+F++M +++
Sbjct: 286 TACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+I + N E ++ F EM + +P++ L SV+S+C +L +L+ G H
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGI-KPDDFTLGSVISSCANLASLEEGAQFHCL 404
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ + + V +L+ +Y KCG +E LF M+ Q++++ +++G A G+ KE
Sbjct: 405 ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKET 464
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +ML GL+PD V ++GVLSACS AGLV +G FD M+ ++ IVP HY C++D
Sbjct: 465 IDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMID 524
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L R+G EA E I+ MP + W +LLS+ ++ N+EIG+ AA+NL + + +P+
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPAS 584
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLL +M+A +W +VA +R M + + + PG S ++ KV+ F + D+SHP I
Sbjct: 585 YVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRI 644
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YE + + ++ EGY PD+S VL DV + +K + HS+KLAIAF LI + Q PIRI
Sbjct: 645 YEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRI 704
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TK IS I R+I+VRD RFH+F DGTCSC D+W
Sbjct: 705 VKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQ 145
+F + E A +N LI GF ++ LY + E V P T A+ + L
Sbjct: 101 LFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK--------------------------- 178
G +H V ++GF FV + L++MY K
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220
Query: 179 ----CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
C+ +E A +F+ M + +W+ ++ NGL E L +F M E ++
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVG-IDQY 279
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
S+L+AC L A + GK H + R NV V ++L+DMY KC + +FR M
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRM 339
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+ ++++ MI G + +EA+ FSEM +G++PDD V+S+C++ + EG
Sbjct: 340 TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGA 399
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
F + L ++ + +V L G+ G + +A L M + V W +L++
Sbjct: 400 Q-FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSF-HDQVSWTALVTG 454
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 9/252 (3%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C L EE K++HA++ + + N F S LV S S+ A ++FR++
Sbjct: 283 SILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDM--YSKCRSIRLAEAVFRRMT 340
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ + EEA+ ++EM G++PD+FT ++ +CA L +L+EG Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V N+L+ +YGKC +E A +F +M SW+A++ +A G
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M +P+ + VLSAC+ G ++ G C + ++ + I +
Sbjct: 461 AKETIDLFEKMLVNGL-KPDGVTFIGVLSACSRAGLVEKG-CDYFDSMQKDHDIVPIDDH 518
Query: 272 -TSLIDMYVKCG 282
T +ID+Y + G
Sbjct: 519 YTCMIDLYSRSG 530
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 35/256 (13%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P F L A AK L + VF + +LF +N+L++ V +
Sbjct: 46 PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F M ++ S++A+I +S G + ++L+ + E+ RP L +++ + L
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVK---------------------------- 280
LG H ++R V + L+DMY K
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITG 221
Query: 281 ---CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
C +E LF++M D+ +T++ M++GL +G EAL +F M EG+ D +
Sbjct: 222 LLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTF 281
Query: 338 VGVLSACSHAGLVNEG 353
+L+AC EG
Sbjct: 282 GSILTACGALAASEEG 297
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 338/577 (58%), Gaps = 10/577 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++L C L K++H+ V++ G + +LV A CA GS+D + +F
Sbjct: 236 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD--GSVDDSRKVFE 293
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
Q+ E + +I +V+ E + EA+ L+ +M + P++F+F ++ KAC L
Sbjct: 294 QMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 353
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q++ + K+G V NSLI+MY + ++E A F + +K++ S++AI+ +A
Sbjct: 354 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 413
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N E LF E+ + + S+LS +GA+ G+ HG L++ N
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFT-FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 472
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ +LI MY +CG +E +F M D+ ++++ MI+G A HG AL +F +ML
Sbjct: 473 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 532
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G +P+++ YV VLSACSH G+++EG F+ M E+ IVP ++HY C+VDL+GR+G+L E
Sbjct: 533 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 592
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I SMP+ + +VWR+LL A +VH N E+G AA+ + + P+ Y+LLSN++A
Sbjct: 593 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 652
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A +W DV KIR M + L + G S +EV +V++F + SHP IY+ + Q+ +
Sbjct: 653 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 712
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K GY PD VL D++E++K + L HS+K+A+AF LI SQ PIRI +NLR+C DC
Sbjct: 713 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 772
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT K IS+ REI+VRD RFH K+G CSC DYW
Sbjct: 773 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 189/401 (47%), Gaps = 14/401 (3%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
EL E +++ C N + ++ V+K G+ C + + G
Sbjct: 121 ELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD 180
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ A +F ++ E + +I F + +A+ L+ +M G PD FT+ ++ A
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSV 197
C +L L G Q+H V ++G D+ V SL++MY KC V+ + +F+QM + +V
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 198 ASWSAIIAAHASNGLWS-ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+AII A+ +G E ++LF +M + RP SVL AC +L G+ +
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHI-RPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 257 GSLIR-NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
++ I+++N V SLI MY + G +E F ++ +K ++Y+ ++ G A + +
Sbjct: 360 SYAVKLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKS 418
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYG 374
+EA +F+E+ G+ + +LS + G + +G R +K Y+ + +
Sbjct: 419 EEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN-- 476
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ + R G + A ++ M +N + W S+++ H
Sbjct: 477 ALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 516
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 16/342 (4%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L+TQ PP ++ LK C+ +N + K VH +++ G + + L++
Sbjct: 16 LMTQQNAPPDLTTYSILLKS--CIRF----RNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 72 TCALSHWGSMDYACSIFRQI-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
S G + A IF + ++ ++ ++ F +A++ + +M E G P+
Sbjct: 70 L--YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPN 127
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCE-KVEFASAI 188
+ F A+ +AC+ G I+G V K G+ E D+ V LI+M+ K + A +
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKV 187
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F +M ++++ +W+ +I A G + + LF +M + P+ SVLSACT LG
Sbjct: 188 FDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSG-YVPDRFTYSSVLSACTELGL 246
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKC---GCLEKGLCLFRMMADKCQLTYSVM 305
L LGK H +IR AL+V V SL+DMY KC G ++ +F M + ++++ +
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 306 ISGLAMHGQ-GKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
I+ G+ KEA+ +F +M+ + P+ + VL AC +
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 157/298 (52%), Gaps = 13/298 (4%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M ++ PD T+ L K+C + + + G +H + + G E D V N+LI++Y KC
Sbjct: 17 MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76
Query: 182 VEFASAIFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
E A IF+ M +++ + SWSA+++ A+N + + + F +M E + P E +V+
Sbjct: 77 TETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM-LELGFYPNEYCFAAVI 135
Query: 241 SACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVK-CGCLEKGLCLFRMMADKC 298
AC++ +G+ +G +++ +V V LIDM+VK G L +F M ++
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
+T+++MI+ A G ++A+ +F +M G PD Y VLSAC+ GL+ G
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255
Query: 359 R-MKLEYRIVPTVQHYGC-VVDLMGRA---GMLGEALELIQSMPIQQNDVVWRSLLSA 411
R ++L + V GC +VD+ + G + ++ ++ + MP + N + W ++++A
Sbjct: 256 RVIRLGLALDVCV---GCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 309
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/588 (38%), Positives = 346/588 (58%), Gaps = 32/588 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD--FNTLIRGFV 107
+HAHV+K+G N AS+L+ A G+ A + G +N LI G
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ FE + + +M T+ ++ AC K + L GMQ+H V + G D
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQR 197
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NN 225
V+N+L++MY +C ++ A +F+ M +S+ASW+++I+ +G LF M +
Sbjct: 198 VENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERD 257
Query: 226 EKCW----------------------------RPEESILVSVLSACTHLGALDLGKCTHG 257
W R +E +VSV++AC LGAL+ G+
Sbjct: 258 TIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARI 317
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ R ++V V +LIDMY KCG +E+ L +F+ M ++ + T++ +I GLA++G+G+E
Sbjct: 318 YMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEE 377
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A+ +F MLR PD+V +VGVL+AC+HAGLV++G F M Y I PTV HYGC++
Sbjct: 378 AIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLI 437
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
D++GRAG L EAL+ I MP++ N +W +LL++ +V+ N EIGE+AA+ L +++ + +
Sbjct: 438 DVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNST 497
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
Y+LLSNMYA++ RW DV +IR + KG+ + PG S++E+ +++FV+ DRSHP
Sbjct: 498 AYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKE 557
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + + L+ GY PD+++VL +V E+EK++ L HS+KLA+ FAL+ IR
Sbjct: 558 IYSKLENVLTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIR 617
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLRMC DCH KLIS +Y RE+IVRDR RFH F+ G+CSC+DYW
Sbjct: 618 IVKNLRMCLDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 14/259 (5%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFK-----ACAKLQALKEGMQIHGHVFKVGFECDLF 167
EEA+ Y M G PD +TFP+L K A + A G IH HV K G E +
Sbjct: 33 EEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAH 92
Query: 168 VQNSLINMYGKCEKVEFASAIFK----QMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+SLI MY A A+ + + W+A+I+ H +G + F +M
Sbjct: 93 AASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDM 152
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ VSVLSAC L LG H ++ + + VE +L+DMY +CG
Sbjct: 153 VRASAMATAVT-YVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGD 211
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
++ LF M + +++ +ISGL GQ A +F M E D + + ++
Sbjct: 212 MDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHM----PERDTIAWTAMIDG 267
Query: 344 CSHAGLVNEGLLCFDRMKL 362
G + L F M++
Sbjct: 268 YVQVGRFRDALETFRYMQI 286
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 337/574 (58%), Gaps = 9/574 (1%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + VHA V + GF + F + L+A A + A ++F +
Sbjct: 125 LLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCR--RLGCARTVFEGLPL 182
Query: 94 P--GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P + ++ + + E EAL ++++M + V+PD ++ A LQ L++G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGR 242
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH V K+G E + + SL MY KC +V A +F +M ++ W+A+I+ +A NG
Sbjct: 243 SIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ + LF EM N+ RP+ + S +SAC +G+L+ + + R+ +V +
Sbjct: 303 FAKDAIDLFHEMINKDV-RPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFIS 361
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++LIDM+ KCG +E +F D+ + +S MI G +HGQ +EA+S++ M R+G+
Sbjct: 362 SALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVH 421
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+DV ++G+L AC+H+G+V EG F+RM +++I P QHY C++DL+GRAG L +A E
Sbjct: 422 PNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYE 480
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I+ MP+Q VW +LLSA K H ++E+G+ AA+ LF I+ + YV LSN+YA A+
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA++R M KGLN+ G S VEV ++ F D+SHP ++ I + +E +LK
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ + L D++++E E L HS+++ IA+ LI QG+ +RI +NLR C +CH
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAA 660
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS + REI+VRD RFH FKDG CSC DYW
Sbjct: 661 TKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 220/415 (53%), Gaps = 10/415 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+++ + + + +++HA +L G ++ F + L+ A S +G + +A +F + P
Sbjct: 26 SLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIH--ASSSYGDITFARQVFDDLPRPQ 83
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +N +IRG+ + F++AL +Y++M V PD+FTFP L KAC L L+ G +H
Sbjct: 84 VFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHA 143
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWSAIIAAHASNGLW 213
VF++GFE D+FVQN LI +Y KC ++ A +F+ + ++++ SW+AI++A+A NG
Sbjct: 144 QVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L++F +M +P+ LVSVL+A T L L+ G+ H S+++ + S
Sbjct: 204 VEALEIFSQMRKMDV-KPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLIS 262
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L MY KCG + LF M + ++ MISG A +G K+A+ +F EM+ + + PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPD 322
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ +SAC+ G + + + + + +YR V ++D+ + G + E
Sbjct: 323 TISITSAISACAQVGSLEQARWMDEYVSRSDYR--DDVFISSALIDMFAKCGSV-ECARS 379
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ + ++ VVW +++ +H I+ + + HP+D L + A
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGQAR-EAISLYRAMERDGVHPNDVTFLGLLIA 433
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/665 (35%), Positives = 361/665 (54%), Gaps = 77/665 (11%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVL-KWGFFWNPFCASN 68
SL +P+ PK L E C IL + + KK+H+ +L NP
Sbjct: 21 SLTTQKPQLSPKFTALT----EDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIK 76
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
L+ A + G Y IF +I + FN +IR +V +++AL ++ M +G
Sbjct: 77 LMR--AYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFY 134
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
PDN+T+P + KAC+ L G+QIHG V K+G + +L++ N L++MYGKC+ ++ A +
Sbjct: 135 PDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRV 194
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
+M + + SW++++A +A NG +++ LKL EM + K +P+ + S+L A T+
Sbjct: 195 LDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKL-KPDAGTMGSLLPAVTNTSC 253
Query: 249 LDL-------GKCTHGSLIRNISALNVIVETSL----IDMYVK----------------- 280
++ K SLI + V V ++ +D+Y++
Sbjct: 254 DNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVL 313
Query: 281 --CGCLEKGLCLFRM---------------------MADKC-----------QLTYSVMI 306
CG L + R+ M KC Q+ + ++
Sbjct: 314 PACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVV 373
Query: 307 SGLAM------HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
S +M GQGK+A+++F +M G PD + +V VL+ACSHAGLV+EG CF+ M
Sbjct: 374 SWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM 433
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
EY I P ++HY C+VDL+GRAG + EA L + MP++ N+ VW SLLSA +V+ ++ I
Sbjct: 434 A-EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNI 492
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
+AA +LFQ+ YVLLSN+YA+A RW DV +R+ M SKG+ + PG S VE+
Sbjct: 493 ALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEIND 552
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
VY F++ D+SH IY+ + + ++K GY P+ L DV+E++K L HS+K
Sbjct: 553 HVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEK 612
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAI FA+++ GS IRI +N+R+C DCH TKLIS I EREII+RD RFH F+DG CS
Sbjct: 613 LAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCS 672
Query: 601 CRDYW 605
C DYW
Sbjct: 673 CGDYW 677
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/582 (37%), Positives = 345/582 (59%), Gaps = 19/582 (3%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+K C +L + K+ H +G+ + F +S L+ +TC G ++ A +F +I
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC-----GKLEDARKVFDEI 137
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF------PALFKACAKLQ 145
+ + ++IRG+ +A+ L+ ++ + D+ F ++ AC+++
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK--VEFASAIFKQMDQKSVASWSAI 203
A IH V K GF+ + V N+L++ Y K + V A IF Q+ K S+++I
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
++ +A +G+ +E ++F + K L +VL A +H GAL +GKC H +IR
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+VIV TS+IDMY KCG +E F M +K +++ MI+G MHG +AL +F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M+ G+ P+ + +V VL+ACSHAGL EG F+ MK + + P ++HYGC+VDL+GRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L +A +LIQ M ++ + ++W SLL+A ++H N+E+ EI+ LF+++S + Y+LLS
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
++YA A RW DV ++R M ++GL + PGFSL+E+ +V+ F+ D HP + IYE +
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +L GY + S V DVDE+EK L+ HS+KLAIAF +++ GS + + +NLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C+DCH KLIS I +RE +VRD KRFH FKDG CSC DYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 39/397 (9%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R +D+ F +N++I + + EAL ++ M + + P +FP KAC+ L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q H F G++ D+FV ++LI MY C K+E A +F ++ ++++ SW+++I +
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 209 SNGLWSECLKLFGEM-----NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
NG + + LF ++ +++ + LVSV+SAC+ + A L + H +I+
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLC----LFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
V V +L+D Y K G E G+ +F + DK +++Y+ ++S A G EA
Sbjct: 214 FDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 320 SIFSEMLREGLEPDDVVYVG-VLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGC 375
+F +++ + + + + VL A SH+G + G D RM LE ++
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS---- 327
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL----FQI 431
++D+ + G + A + M +N W ++++ +H + AAK L I
Sbjct: 328 IIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH------AAKALELFPAMI 380
Query: 432 NSHHPSDYVLL---------SNMYARAQRWYDVAKIR 459
+S +Y+ + ++ RW++ K R
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
E+ + + +D+ V SW+++IA A +G +E L F M + P S
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCA 82
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
+ AC+ L + GK TH ++ V ++LI MY CG LE +F + +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY------VGVLSACS 345
++++ MI G ++G +A+S+F ++L + + DD ++ V V+SACS
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/590 (36%), Positives = 335/590 (56%), Gaps = 66/590 (11%)
Query: 46 EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
E K++HAH+LK + S + + CA + S YA IF+ +D +NT +R
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFN--SSFSYAKLIFQLLDASEVTHWNTCLRS 87
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
F + +A+ L+ + E + PD++T + KAC++L ++ G +HG+V K+G + +
Sbjct: 88 FAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-- 223
+F+QN ++++Y C ++ A +F +M Q+ V +W+ +IA G KLF EM
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207
Query: 224 NNEKCWR----------------------------PEESILVSVLSACTHLGALDLGKCT 255
N + W P E +V+VL AC +G L LG+
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H R+ N+ V +LIDMYVKCGCLE +F M ++ +++S MI+GLA HG+
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
++AL++F++M+ G++P+ V ++G+L ACSH G+V +G F M +Y IVP ++HYGC
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL RAG+L EA E I +MPI N VVW +LL KVH N+++ E A ++L +++ +
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLN 447
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YV+LSN+YA A RW DVA++R M +G W
Sbjct: 448 DGYYVVLSNIYAEAGRWEDVARVRKLMRDRG---------------------------TW 480
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ + + ++K +GY P+ S VL D++ED+K + L HS+KLA+ F LI + G+
Sbjct: 481 EKLLQ-------RMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTV 533
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCH K+ISV+ REI+VRDR RFH FK+G+CSC DYW
Sbjct: 534 IRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 583
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/585 (37%), Positives = 343/585 (58%), Gaps = 8/585 (1%)
Query: 26 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWN-PFCASNLVATCALSHWGSM 81
+LR E L + C L K++H + LK F N A+ VA+ A GS+
Sbjct: 387 DLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYA--KCGSL 444
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
YA +F I +N LI G+ + + +L Y +M G+ PD FT +L AC
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+++++LK G ++HG + + E D FV SL+++Y C ++ A +F M+ K++ SW+
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++ + NG L LF +M +P E ++SV AC+ L +L LG+ HG ++
Sbjct: 565 TMVNGYLQNGFPERALSLFRQMVLYGV-QPCEISMMSVFGACSLLPSLRLGREAHGYALK 623
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ N + S+IDMY K G + + +F + ++ +++ M+ G +HG+ KEA+ +
Sbjct: 624 CLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKL 683
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM R G PD++ ++GVL+AC+H+GLV+EGL D+MK + + PT++HY CV+D++
Sbjct: 684 FEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLV 743
Query: 382 RAGMLGEALEL-IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
RAG L EAL++ + M + +W LLS+ ++H NLE+GE A LF P +YV
Sbjct: 744 RAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYV 803
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA + +W +V K+R M L + G S +E+ KV+ FV+ + S ++ I
Sbjct: 804 LLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKS 863
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ +E ++ GY PD S V D+ E+EK E+L+GHS+KLAI + LI S+G+ +R+ +
Sbjct: 864 LWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYK 923
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH KLIS + EREI+VRD KRFH FK+G CSC DYW
Sbjct: 924 NLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 160/309 (51%), Gaps = 7/309 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
K+++ +K+H V + N V T S GS D + S+F + + F +N
Sbjct: 95 KDIQLGRKIHQLVSESARLSNDDVLCTRVIT-MYSMCGSPDDSRSVFDALRKKNLFQWNA 153
Query: 102 LIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+I + + + L ++ +M E G+ PDNFTFP + KACA + ++ G+ +HG V K
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
D+FV N+L++ YG V A +FK M ++++ SW+++I + NGL EC L
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLL 273
Query: 221 GEM---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
G+M ++E + P+ + L +VL C + +GK HG ++ V+V +L+DM
Sbjct: 274 GQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDM 333
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG--LEPDDV 335
Y KCGC+ +F++ +K ++++ M+ G + G + + +ML G L D+V
Sbjct: 334 YSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEV 393
Query: 336 VYVGVLSAC 344
+ + C
Sbjct: 394 TILNAVPVC 402
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GL 330
T +I MY CG + +F + K ++ +IS + + L +F +M+ E GL
Sbjct: 121 TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD+ + V+ AC+ V G L + ++ R+V V +V G G + +AL
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVG-LAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDAL 239
Query: 391 ELIQSMPIQQNDVVWRSLL 409
+ + MP ++N V W S++
Sbjct: 240 RVFKIMP-ERNLVSWNSMI 257
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/602 (38%), Positives = 344/602 (57%), Gaps = 51/602 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVL-KWGFFWNPFCASNLV---ATCALSHWGSMDYACSIF 88
++L C +LE K++HA VL N F LV C G + +
Sbjct: 292 SVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFR 351
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEM-FERGVEPDNFTFPALFKACAKLQA 146
R I +N +I G+V+ EF+ EA+ L+ EM FE G+ P++ T ++ AC + ++
Sbjct: 352 RTIAV-----WNAMIAGYVRN-EFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCES 405
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ IH V K GFE D +VQN+L++MY + ++E A +IF M++K + SW+ +I
Sbjct: 406 FLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITG 465
Query: 207 HASNGLWSECLKLFGEM-----------------NNEKCWRPEESILVSVLSACTHLGAL 249
+ G + L L +M N +P L++VL C L AL
Sbjct: 466 YVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAAL 525
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
GK H ++ + + +V V ++L+DMY KCGCL +F M+ + +T++V+I
Sbjct: 526 GKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAY 585
Query: 310 AMHGQGKEALSIFSEMLREG-----LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MHG+G+EAL +F M+ EG + P++V Y+ + ++ SH+G+V+EGL F MK ++
Sbjct: 586 GMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKH 645
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEI 423
I PT HY C+VDL+GR+G + EA LI++MP V W SLL A K+H NLEIGEI
Sbjct: 646 GIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEI 705
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAKNLF ++ + DY +M R +M KG+ + PG S +E +V+
Sbjct: 706 AAKNLFVLDPN-VLDYGTKQSMLGR------------KMKEKGVRKEPGCSWIEHGDEVH 752
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
KF++ D SHP ++E + + ++K EGY PD S VL +V E+EK L GHS++LAI
Sbjct: 753 KFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAI 812
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF L++ S G+ IR+A+NLR+CNDCH TK IS I +REII+RD +RFH F++GTCSC D
Sbjct: 813 AFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGD 872
Query: 604 YW 605
YW
Sbjct: 873 YW 874
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 128/243 (52%), Gaps = 3/243 (1%)
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
F +A+ Y M GV PDNF FPA+ KA A +Q L G Q+H HVFK G V NS
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L+NMYGKC ++ A +F ++ + SW+++I A W + LF M E P
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG-P 184
Query: 232 EESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
LVSV AC++L L LGK H ++RN +L+ MY K G + + L
Sbjct: 185 TSFTLVSVAHACSNLINGLLLGKQVHAFVLRN-GDWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + DK ++++ +IS L+ + + +EAL ML+ G+ P+ V VL ACSH ++
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEML 303
Query: 351 NEG 353
G
Sbjct: 304 GCG 306
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 186/387 (48%), Gaps = 24/387 (6%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWN---PFCASNLVATCALSHWGSMDYACSIFRQ 90
+LK +++ K++HAHV K+G P N+ C G +D A +F +
Sbjct: 91 VLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKC-----GDIDAARRVFDE 145
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKE 149
I +N++I + E+E A+ L+ M V P +FT ++ AC+ L L
Sbjct: 146 ITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLL 205
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H V + G + F N+L+ MY K +V A +F D K + SW+ II++ +
Sbjct: 206 GKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQ 264
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NV 268
N + E L L+ + + RP L SVL AC+HL L GK H ++ N + N
Sbjct: 265 NDRFEEAL-LYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENS 323
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +L+DMY C EKG +F M + ++ MI+G + EA+ +F EM+ E
Sbjct: 324 FVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFE 383
Query: 329 -GLEPDDVVYVGVLSACSH--AGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
GL P+ V VL AC + L EG+ C +K + VQ+ ++D+ R G
Sbjct: 384 LGLSPNSVTLSSVLPACVRCESFLDKEGIHSCV--VKWGFEKDKYVQN--ALMDMYSRMG 439
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSA 411
+ A + SM +++ V W ++++
Sbjct: 440 RIEIARSIFGSMN-RKDIVSWNTMITG 465
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 186/407 (45%), Gaps = 34/407 (8%)
Query: 35 LTILKTCKNLEEF----KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
+++ C NL K+VHA VL+ G W F + LV A G + A ++F
Sbjct: 190 VSVAHACSNLINGLLLGKQVHAFVLRNGD-WRTFTNNALVTMYA--KLGRVYEAKTLFDV 246
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
D+ +NT+I + FEEAL + M + GV P+ T ++ AC+ L+ L G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306
Query: 151 MQIHGHVFKVGFECDL----FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+IH V DL FV +L++MY C++ E +F M ++++A W+A+IA
Sbjct: 307 KEIHAFVL---MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAG 363
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ N E ++LF EM E P L SVL AC + + H +++
Sbjct: 364 YVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEK 423
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ V+ +L+DMY + G +E +F M K ++++ MI+G + G+ +AL++ +M
Sbjct: 424 DKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQ 483
Query: 327 RE------------------GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
R L+P+ V + VL C+ + +G ++ +
Sbjct: 484 RGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQMLSK 542
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V +VD+ + G L + + + M + +N + W L+ A +H
Sbjct: 543 DVAVGSALVDMYAKCGCLNLSRTVFEQMSV-RNVITWNVLIMAYGMH 588
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 344/572 (60%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C LE F K VH VLK + + + L+ + +G + +F ++ +
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDL--YTKFGDANDVLRVFEEMPK 205
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
++ +I + + + EA+ L+ +M V P+ FTF ++ ++CA ++ L+ G Q+
Sbjct: 206 HDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQV 265
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H HV KVG + ++FV N+L+++Y KC +++ + +F ++ ++ +W+ +I + +G
Sbjct: 266 HCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDG 325
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L L+ M + + E SVL AC L A++LG H ++ I +V+V +
Sbjct: 326 DKALSLYKNMLECQV-QASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNA 384
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG ++ +F M++++ +++++ MISG +MHG EAL F M P+
Sbjct: 385 LIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPN 444
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ +V +LSACS+AGL++ G F M +Y I P ++HY C+V L+GR+G L +A++LI
Sbjct: 445 KLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLI 504
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ +P++ N VWR+LL A +H+++++G ++A+ + QI+ + +VLLSN+YAR +RW
Sbjct: 505 EEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWN 564
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
VA +R M +KG+ + PG S +E V+ F D SHP I M+ + + + G
Sbjct: 565 SVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAG 624
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y PD++ VLRDV++DEK+ L HS++LA+AF LI IRI +NLR+C DCH+ K
Sbjct: 625 YVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKNLRICTDCHSAIK 684
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I +R+II+RD RFH F+DG CSC DYW
Sbjct: 685 LISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 188/381 (49%), Gaps = 5/381 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L +L + + E +HA + K G N F + L+ A+ GS++ A F I
Sbjct: 48 LKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVC--GSVNSARQAFDAIACK 105
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ ++ + + F+++L L+ EM G P++FTF + KAC L+A G +H
Sbjct: 106 DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVH 165
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G V K +E DL+V L+++Y K +F++M + V WS +I+ +A +
Sbjct: 166 GCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSR 225
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E ++LFG+M P + SVL +C + L LGK H +++ NV V +L
Sbjct: 226 EAVELFGQMRRAFVL-PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNAL 284
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+D+Y KCG L+ + LF + ++ ++T++ MI G G G +ALS++ ML ++ +
Sbjct: 285 MDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASE 344
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V Y VL AC+ + G + L+ V ++D+ + G + A L+
Sbjct: 345 VTYSSVLRACASLAAMELGTQ-IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVF 402
Query: 395 SMPIQQNDVVWRSLLSASKVH 415
M +++++ W +++S +H
Sbjct: 403 DMLSERDEISWNAMISGYSMH 423
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 152/311 (48%), Gaps = 3/311 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
F TLI+G+V+ + +E + L++ + G E + F F + K ++ + +H ++
Sbjct: 9 FVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIY 68
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K+G E + FV +LI+ Y C V A F + K + SW+ ++A +A N + + L+
Sbjct: 69 KLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQ 128
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
LF EM + P VL AC L A +GK HG +++ +++ V L+D+Y
Sbjct: 129 LFAEMRMVG-FNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLY 187
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
K G L +F M + +S MIS A Q +EA+ +F +M R + P+ +
Sbjct: 188 TKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFA 247
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
VL +C+ + G + L+ + V ++D+ + G L +++L +P
Sbjct: 248 SVLQSCASIENLQLGKQVHCHV-LKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP- 305
Query: 399 QQNDVVWRSLL 409
+N+V W +++
Sbjct: 306 NRNEVTWNTMI 316
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 317/581 (54%), Gaps = 45/581 (7%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN + N +H G MD A S+F + + +N +I G+ + +AL L++
Sbjct: 233 WNAMVSLN-------THLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 285
Query: 121 EMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
M E + PD FT ++ ACA L ++ G Q+H ++ + + V N+LI+ Y K
Sbjct: 286 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 345
Query: 180 EKVEFASAIFKQ---------------------------------MDQKSVASWSAIIAA 206
VE A I Q M+ + V +W+A+I
Sbjct: 346 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405
Query: 207 HASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NG E + LF M C P L +VLS C L LD GK H IR++
Sbjct: 406 YEQNGRNDEAIDLFRSMIT--CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V ++I MY + G +F + K +T++ MI LA HGQG+EA+ +F E
Sbjct: 464 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 523
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
MLR G+EPD + YVGVLSACSHAG VNEG +D++K E++I P + HY C+VDL+ RAG
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ EA E I+ MP++ + + W SLLSA +VH N E+ E+AA+ L I+ ++ Y ++N
Sbjct: 584 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 643
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+Y+ RW D A+I K + + GFS + K++ F + D HP D +Y M +
Sbjct: 644 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAAR 703
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M ++K G+ PD+ VL DVD++ K E L HS+KLAIAF LI + + +R+ +NLR+
Sbjct: 704 MWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRV 763
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CNDCH K IS + +REIIVRD RFH F+DG CSC+DYW
Sbjct: 764 CNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 186/424 (43%), Gaps = 79/424 (18%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
N F ++L++ A S G + A +F ++ E A + ++ G + F EA+ +
Sbjct: 97 NVFTWNSLLSMFAKS--GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G P FT + +CA QA G ++H V K+G + V NS++NMYGKC
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 182 VEFASAIFKQMDQKSVA-------------------------------SWSAIIAAHASN 210
E A+ +F++M +SV+ SW+A+IA + N
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQN 274
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA----- 265
GL ++ LKLF M +E P+E + SVLSAC +LG + +GK H ++R A
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 266 ----------------------------LNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
LNVI T+L++ YVK G +E +F +M ++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+ ++ MI G +G+ EA+ +F M+ G EP+ VLS C+ L C
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA-------SLACL 447
Query: 358 DRMK-LEYRIVPTVQHYG-----CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
D K + R + ++ ++ + R+G A + + ++ + W S++ A
Sbjct: 448 DYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 507
Query: 412 SKVH 415
H
Sbjct: 508 LAQH 511
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV SL+ M+ K G L +F M ++ ++++VM+ GL G+ EA+ +M
Sbjct: 97 NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT 156
Query: 327 REGLEPDDVVYVGVLSAC--SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+G P VLS+C + AG V + F ++ + V V+++ G+ G
Sbjct: 157 ADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSF---VVKLGLGSCVPVANSVLNMYGKCG 213
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
A + + MP++ W +++S + +++ E
Sbjct: 214 DSETATTVFERMPVRSVS-SWNAMVSLNTHLGRMDLAE 250
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 337/577 (58%), Gaps = 10/577 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++L C L K++H+ V++ G + +LV A CA GS+D + +F
Sbjct: 61 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD--GSVDDSRKVFE 118
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
Q+ E + +I + + E + EA+ L+ +M + P++F+F ++ KAC L
Sbjct: 119 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 178
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q++ + K+G V NSLI+MY + ++E A F + +K++ S++AI+ +A
Sbjct: 179 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 238
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N E LF E+ + + S+LS +GA+ G+ HG L++ N
Sbjct: 239 KNLKSEEAFLLFNEIADTGIGISAFT-FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ +LI MY +CG +E +F M D+ ++++ MI+G A HG AL +F +ML
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 357
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G +P+++ YV VLSACSH G+++EG F+ M E+ IVP ++HY C+VDL+GR+G+L E
Sbjct: 358 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 417
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I SMP+ + +VWR+LL A +VH N E+G AA+ + + P+ Y+LLSN++A
Sbjct: 418 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 477
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A +W DV KIR M + L + G S +EV +V++F + SHP IY+ + Q+ +
Sbjct: 478 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 537
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K GY PD VL D++E++K + L HS+K+A+AF LI SQ PIRI +NLR+C DC
Sbjct: 538 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 597
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT K IS+ REI+VRD RFH K+G CSC DYW
Sbjct: 598 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 169/338 (50%), Gaps = 11/338 (3%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ E + +I F + +A+ L+ +M G PD FT+ ++ AC +
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSVASW 200
L L G Q+H V ++G D+ V SL++MY KC V+ + +F+QM + +V SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 201 SAIIAAHASNGLWS-ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
+AII A+A +G E ++LF +M + RP SVL AC +L G+ +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHI-RPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 260 IR-NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++ I+++N V SLI MY + G +E F ++ +K ++Y+ ++ G A + + +EA
Sbjct: 188 VKLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVV 377
+F+E+ G+ + +LS + G + +G R +K Y+ + + ++
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALI 304
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ R G + A ++ M +N + W S+++ H
Sbjct: 305 SMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 341
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/571 (38%), Positives = 324/571 (56%), Gaps = 4/571 (0%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T L C NLE+ K VHA V+ + N + LV +G MD A + + + E
Sbjct: 558 TALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTM--YGKFGLMDEAQKVCKIMPERD 615
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ-ALKEGMQIH 154
+N LI G + + + +N M G+ + T L C LK GM IH
Sbjct: 616 VVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIH 675
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ GFE D +VQ+SLI MY +C + +S IF + K+ ++W+AI +A+A G
Sbjct: 676 AHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGE 735
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E LK M N+ + S V+ L+ +L LD G+ H +I+ L+ V +
Sbjct: 736 EALKFIARMRNDGVDLDQFSFSVA-LATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNAT 794
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG ++ + + + + +++++IS LA HG ++A F EML GL+PD
Sbjct: 795 MDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDH 854
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V +V +LSACSH GLV+EGL+ F M E+ + ++H C++DL+GR+G L EA I
Sbjct: 855 VTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFID 914
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP+ N+ VWRSLL+A KVH NLE+G AA LF++NS S YVL SN+ A QRW D
Sbjct: 915 KMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGD 974
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V +R +M S+ L + P S +++ KV F D+ HP IY + ++ + EG+
Sbjct: 975 VENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGH 1034
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD S L+D DE++K L HS+++A+AF LI+ ++GSP+RI +NLR+C DCH+ KL
Sbjct: 1035 MPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKL 1094
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S I R+I+VRD RFH F G CSC DYW
Sbjct: 1095 VSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 185/373 (49%), Gaps = 21/373 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +HA +K N F + LV S +GS+ YA +F ++ + +N +I GFV
Sbjct: 167 KALHALCVKDVIQQNTFYTNTLVNM--YSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM-QIHGHVFKVGFECDL 166
+ + +A+ + MFE GV P ++ ++ AC + + EG QIHG+V K G ++
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--N 224
FV SL++ YG V A+ +F+++++ ++ SW++++ +A NG E L ++ + N
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGC 283
C + + +V+ C G +G G +I++ + +V V SLI M+
Sbjct: 345 GLIC---TGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDS 401
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E+ +F M ++ ++++ +I+ A +G+ +E+L F M R + D + +L A
Sbjct: 402 VEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPA 461
Query: 344 CSHA-----GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
C A G GL+ + LE + ++ + +AG +A + +MP
Sbjct: 462 CGSAQHLKWGRGLHGLIT--KSGLESNVCVC----NSLLSMYAQAGSSEDAELVFHTMP- 514
Query: 399 QQNDVVWRSLLSA 411
++ + W S++++
Sbjct: 515 ARDLISWNSMMAS 527
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 148/312 (47%), Gaps = 8/312 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+++TC + ++ V+K G + +N + + ++ S++ A +F +
Sbjct: 355 TVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLIS-MFGNYDSVEEASRVFNNMQ 413
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N++I FEE+L + M + D T AL AC Q LK G
Sbjct: 414 ERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRG 473
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG + K G E ++ V NSL++MY + E A +F M + + SW++++A+H +G
Sbjct: 474 LHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGK 533
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+S + L EM + + LSAC +L L K H +I N+I+
Sbjct: 534 YSHAILLLVEMLKTR-KAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGN 589
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ MY K G +++ + ++M ++ +T++ +I G A + F+ M REGL
Sbjct: 590 TLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLS 649
Query: 333 DDVVYVGVLSAC 344
+ + V +L C
Sbjct: 650 NYITIVNLLGTC 661
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 5/310 (1%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L K +++ G +H K + + F N+L+NMY K +++A +F +M ++
Sbjct: 153 LQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRN 212
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG-KCT 255
ASW+ +I+ G + + ++ F M E P ++ S+++AC G + G +
Sbjct: 213 DASWNNMISGFVRVGWYHKAMQFFCHM-FENGVTPSSYVIASMVTACDRSGCMTEGARQI 271
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +++ NV V TSL+ Y G + + LF + + ++++ ++ A +G
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT 331
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KE L+I+ + GL V+ C G G + +V
Sbjct: 332 KEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANS 391
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++ + G + EA + +M +++ + W S+++AS HN E + +H
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQ-ERDTISWNSIITASA--HNGRFEESLGHFFWMRRTHP 448
Query: 436 PSDYVLLSNM 445
+DY+ +S +
Sbjct: 449 KTDYITISAL 458
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/582 (37%), Positives = 345/582 (59%), Gaps = 19/582 (3%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+K C +L + K+ H +G+ + F +S L+ +TC G ++ A +F +I
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC-----GKLEDARKVFDEI 137
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF------PALFKACAKLQ 145
+ + ++IRG+ +A+ L+ ++ + D+ F ++ AC+++
Sbjct: 138 PKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK--VEFASAIFKQMDQKSVASWSAI 203
A IH V K GF+ + V N+L++ Y K + V A IF Q+ K S+++I
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
++ +A +G+ +E ++F + K L +VL A +H GAL +GKC H +IR
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+VIV TS+IDMY KCG +E F M +K +++ MI+G MHG +AL +F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M+ G+ P+ + +V VL+ACSHAGL EG F+ MK + + P ++HYGC+VDL+GRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L +A +LIQ M ++ + ++W SLL+A ++H N+E+ EI+ LF+++S + Y+LLS
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
++YA A RW DV ++R M ++GL + PGFSL+E+ +V+ F+ D HP + IYE +
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +L GY + S V DVDE+EK L+ HS+KLAIAF +++ GS + + +NLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C+DCH KLIS I +RE +VRD KRFH FKDG CSC DYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 188/397 (47%), Gaps = 39/397 (9%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R +D+ F +N++I + + EAL ++ M + + P +FP KAC+ L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q H F G++ D+FV ++LI MY C K+E A +F ++ ++ + SW+++I +
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYD 153
Query: 209 SNGLWSECLKLFGEM-----NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
NG + + LF ++ +++ + LVSV+SAC+ + A L + H +I+
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLC----LFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
V V +L+D Y K G E G+ +F + DK +++Y+ ++S A G EA
Sbjct: 214 FDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 320 SIFSEMLREGLEPDDVVYVG-VLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGC 375
+F +++ + + + + VL A SH+G + G D RM LE ++
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS---- 327
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL----FQI 431
++D+ + G + A + M +N W ++++ +H + AAK L I
Sbjct: 328 IIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH------AAKALELFPAMI 380
Query: 432 NSHHPSDYVLL---------SNMYARAQRWYDVAKIR 459
+S +Y+ + ++ RW++ K R
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
E+ + + +D+ V SW+++IA A +G +E L F M + P S
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCA 82
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
+ AC+ L + GK TH ++ V ++LI MY CG LE +F + +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDI 142
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY------VGVLSACS 345
++++ MI G ++G +A+S+F ++L + + DD ++ V V+SACS
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 339/626 (54%), Gaps = 65/626 (10%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCAS---NLVATCA----------------LSHW------ 78
+E KKVH+ ++K G N ++ N+ A C +S W
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 79 ----GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV-EPDNFT 133
G MD A + F Q+ E +N++I GF + AL ++++M + PD FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA-------- 185
++ ACA L+ L G QIH H+ GF+ V N+LI+MY +C VE A
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 186 -------------------------SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
IF + + V +W+A+I + +G + E + LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M RP L ++LS + L +L GK HGS +++ +V V +LI MY K
Sbjct: 402 RSMVG-GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 281 CGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
G + F ++ ++ ++++ MI LA HG +EAL +F ML EGL PD + YVG
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
V SAC+HAGLVN+G FD MK +I+PT+ HY C+VDL GRAG+L EA E I+ MPI+
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ V W SLLSA +VH N+++G++AA+ L + + Y L+N+Y+ +W + AKIR
Sbjct: 581 PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M + + GFS +EV KV+ F +D +HP + IY + ++ ++K GY PD +
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTA 700
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
VL D++E+ K + L+ HS+KLAIAF LI + +RI +NLR+CNDCHT K IS +
Sbjct: 701 SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH FKDG CSCRDYW
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 178/429 (41%), Gaps = 72/429 (16%)
Query: 55 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE 114
L+ F WN + A S G MD C F Q+ + + + T+I G+ ++ +
Sbjct: 77 LRTAFSWNTVLS-------AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
A+ + +M + G+EP FT + + A + ++ G ++H + K+G ++ V NSL+N
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLN 189
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG------------------LWS-- 214
MY KC A +F +M + ++SW+A+IA H G W+
Sbjct: 190 MYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249
Query: 215 -----------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
L +F +M + P+ L SVLSAC +L L +GK H ++
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCL--------------------------------- 290
++ IV +LI MY +CG +E L
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + D+ + ++ MI G HG EA+++F M+ G P+ +LS S +
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+ G ++ + +V ++ + +AG + A + +++ V W S++
Sbjct: 430 SHGKQIHGS-AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 411 ASKVHHNLE 419
A H + E
Sbjct: 489 ALAQHGHAE 497
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 64/257 (24%)
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKC----------EKVEFASA--------------- 187
+H V K G +++ N+L+N+Y K +++ +A
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 188 ------IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
F Q+ Q+ SW+ +I + + G + + +++ G+M E P + L +VL+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPTQFTLTNVLA 154
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC-------------------- 281
+ ++ GK H +++ NV V SL++MY KC
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 282 -----------GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG- 329
G ++ + F MA++ +T++ MISG G AL IFS+MLR+
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 330 LEPDDVVYVGVLSACSH 346
L PD VLSAC++
Sbjct: 275 LSPDRFTLASVLSACAN 291
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/589 (36%), Positives = 334/589 (56%), Gaps = 13/589 (2%)
Query: 27 LRLKEQECLTILKTC-----KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
LR E IL C +LE K+VH +K G + A++LV S G
Sbjct: 280 LRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNM--YSKMGCA 337
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF--- 138
+A +F + +N++I + EE++ L+ ++ G++PD+FT ++
Sbjct: 338 YFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLAT 397
Query: 139 --KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
KAC L L +G QIH H K GF+ DL V + +++MY KC + A +F +
Sbjct: 398 AAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPD 457
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+W+++I+ NG + L+++ M + P+E +++ A + + AL+ G+ H
Sbjct: 458 DVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM-PDEYTFATLIKASSCVTALEQGRQLH 516
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
++I+ + V TSL+DMY KCG +E LF+ M + ++ M+ GLA HG +
Sbjct: 517 ANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE 576
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+++F M G+EPD V ++G+LSACSHAGL +E M +Y I P ++HY C+
Sbjct: 577 EAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCL 636
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VD +GRAG++ EA ++I++MP + + + R+LL A ++ ++E G+ A LF +
Sbjct: 637 VDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDS 696
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLLSN+YA A RW DV R M K + + PGFS ++V ++ FV DRSHP D
Sbjct: 697 AAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQAD 756
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
IY+ + +M ++ +GY PD VL DV+++EK L HS+KLAIA+ LI + I
Sbjct: 757 IIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTI 816
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C DCH K IS ++EREI++RD RFH F+DG CSC DYW
Sbjct: 817 RVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 10/301 (3%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+ NL K HA ++ G + F ++NL+ S GS+ A +F E +
Sbjct: 89 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTM--YSKCGSLSSARQVFDTTPERDLVTW 146
Query: 100 NTLIRGFVKEVE-----FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
N ++ + V+ +E L L+ + T + K C L +H
Sbjct: 147 NAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVH 206
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G+ K+G E D+FV +L+N+Y KC ++ A +F M ++ V W+ ++ + GL
Sbjct: 207 GYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEK 266
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA--LDLGKCTHGSLIRNISALNVIVET 272
E +LF E + RP+E + +L+ C G L+LGK HG +++ +V V
Sbjct: 267 EAFQLFSEFHRSGL-RPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVAN 325
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY K GC +F M ++++ MIS A +E++++F ++L EGL+P
Sbjct: 326 SLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKP 385
Query: 333 D 333
D
Sbjct: 386 D 386
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L + L G H + G D F+ N+L+ MY KC + A +F ++
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 197 VASWSAIIAAHAS-----NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ +W+AI+ A+A+ +G E L LF + L VL C + G L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLF-RLLRASLGSTTRMTLAPVLKLCLNSGCLWA 201
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
+ HG I+ +V V +L+++Y KCG + LF M ++ + +++M+ G
Sbjct: 202 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 261
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
G KEA +FSE R GL PD+ +L+ C AG
Sbjct: 262 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAG 298
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/566 (39%), Positives = 320/566 (56%), Gaps = 12/566 (2%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSIFRQIDEPGAFDF 99
LE +VH H ++ G S+ A H GS+D A +F ++ +
Sbjct: 540 LEWVNEVHKHAVETGLI------SDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTW 593
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N +I G ++ EAL L+ +M G PD TF + A +AL+ ++H H
Sbjct: 594 NAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATD 653
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
G DL V N+L++ Y KC V++A +F M +++V +W+ +I A +G +
Sbjct: 654 AGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSH 712
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F +M E P+ + VS+LSAC GAL+ K H + ++ V +L+ MY
Sbjct: 713 FLQMLREGI-VPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYA 771
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG ++ +F M ++ +++VMI GLA HG+G EAL F +M EG +P+ YV
Sbjct: 772 KCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVA 831
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
VL+ACSHAGLV+EG F M +Y I PT++HY C+VDL+GRAG+L EA I +MPI+
Sbjct: 832 VLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIE 891
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+D W +LL A + NLE+ E AAK ++ S YVLLSN+YA +W +R
Sbjct: 892 PDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVR 951
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
+ M KG+ + PG S +EV +++ FV D SHP IY ++ + +LK +GY PD
Sbjct: 952 SMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTR 1011
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
VLR+ D++ K + L HS+KLAI + L+H PIR+ +NLR+C+DCHT TK IS I
Sbjct: 1012 LVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKIT 1071
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
REI+ RD KRFH FKDG CSC DYW
Sbjct: 1072 GREIVARDAKRFHHFKDGVCSCGDYW 1097
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 172/316 (54%), Gaps = 6/316 (1%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL+ C E+ K+VH ++K G N + A+ L+ G + A +F ++
Sbjct: 122 VNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRV--YIRCGRLQCARQVFDKL 179
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + + T+I G+ + E+A+ +Y++M + +P+ T+ ++ KAC LK G
Sbjct: 180 LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGK 239
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH H+ + GF+ D+ V+ +L+NMY KC +E A IF +M +++V SW+ +I A G
Sbjct: 240 KIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYG 299
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E LF +M E + P VS+L+A GAL+ K H + AL++ V
Sbjct: 300 RGQEAFHLFLQMQREG-FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVG 358
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+ MY K G ++ +F M ++ +++VMI GLA HG+G+EA S+F +M R G
Sbjct: 359 NALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCL 418
Query: 332 PDDVVYVGVLSACSHA 347
P+ Y+ +L+A + A
Sbjct: 419 PNLTTYLSILNASAIA 434
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 141/239 (58%), Gaps = 1/239 (0%)
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+ ++A+ + ++G+ D+F++ + + C K + + Q+H + K G E +L+V
Sbjct: 97 ITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVA 156
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N L+ +Y +C +++ A +F ++ +K++ W+ +I +A G + ++++ +M E C
Sbjct: 157 NKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQE-CG 215
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P E +S+L AC L GK H +I++ +V VET+L++MYVKCG +E
Sbjct: 216 QPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQL 275
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M ++ ++++VMI GLA +G+G+EA +F +M REG P+ YV +L+A + AG
Sbjct: 276 IFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG 334
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 25/366 (6%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPE---LNLRLKEQECLTILKT------------CKNLE 45
MT + ++++ + +G E L L+++ CL L T LE
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440
Query: 46 EFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
K VH H + GF + + L+ A C GS+D A +F + + +N +
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKC-----GSIDDARLVFDGMCDRDVISWNAM 495
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ G + EA ++ +M + G+ PD+ T+ +L AL+ ++H H + G
Sbjct: 496 MGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL 555
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
D V ++ I+MY +C ++ A +F ++ + V +W+A+I A E L LF +
Sbjct: 556 ISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQ 615
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E + P+ + +++LSA AL+ K H S + +++ V +L+ Y KCG
Sbjct: 616 MQREG-FIPDATTFINILSANVDEEALEWVKEVH-SHATDAGLVDLRVGNALVHTYSKCG 673
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
++ +F M ++ T+++MI GLA HG G +A S F +MLREG+ PD YV +LS
Sbjct: 674 NVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILS 733
Query: 343 ACSHAG 348
AC+ G
Sbjct: 734 ACASTG 739
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 325/555 (58%), Gaps = 12/555 (2%)
Query: 59 FFWNPFCASNLV-ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
F +PF ++ L+ A ALS ++ A +F + F +N +++ EEAL
Sbjct: 280 FRSDPFLSTRLIEAYAALS---ALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALT 336
Query: 118 LYNEMFERGVEPDNFTFPALFKAC-----AKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
+M GV D++++ KAC + L A ++H H + G+ V +L
Sbjct: 337 CLADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTL 396
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRP 231
I+ Y K V +A +F M +++ SWSA+I +A N + +++F EM ++ P
Sbjct: 397 IDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVP 456
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+VSVL AC + AL GK H ++R L V V +L+ MY+KCGCLE G +F
Sbjct: 457 NSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIF 516
Query: 292 RMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
+ + + +++ +ISG MHG G+E+L +F EM+ EG+ P+ + +V VL ACSH GLV
Sbjct: 517 NWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLV 576
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+G F+ M +EY + P +HY C+VDL+GRAG L EA+ELIQSM IQ + VW SLL
Sbjct: 577 EQGKKLFESM-VEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQVWGSLLG 635
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A ++H ++E E+A +LF + + +YVLL+++YARA+ V ++ + L +
Sbjct: 636 ACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLKELLEEHALEKV 695
Query: 471 PGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEK 530
PG S +EV +K+Y FVS D +P + + +I + Q+K EGY PD VL D++E+EK
Sbjct: 696 PGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTRSVLYDIEEEEK 755
Query: 531 RERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKR 590
L GHS+KLA+AF LI G IRI +NLR+C DCH+ TK IS +REI+VRD R
Sbjct: 756 ERILLGHSEKLAVAFGLIKTGSGEAIRITKNLRLCEDCHSVTKFISKFTDREIVVRDVNR 815
Query: 591 FHRFKDGTCSCRDYW 605
FH F++G CSCRDYW
Sbjct: 816 FHHFRNGVCSCRDYW 830
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/577 (37%), Positives = 337/577 (58%), Gaps = 10/577 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++L C L K++H+ V++ G + +LV A CA GS+D + +F
Sbjct: 56 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD--GSVDDSRKVFE 113
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFE-EALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
Q+ E + +I + + E + EA+ L+ +M + P++F+F ++ KAC L
Sbjct: 114 QMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPY 173
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q++ + K+G V NSLI+MY + ++E A F + +K++ S++AI+ +A
Sbjct: 174 TGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYA 233
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N E LF E+ + + S+LS +GA+ G+ HG L++ N
Sbjct: 234 KNLKSEEAFLLFNEIADTGIGISAFT-FASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ +LI MY +CG +E +F M D+ ++++ MI+G A HG AL +F +ML
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 352
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G +P+++ YV VLSACSH G+++EG F+ M E+ IVP ++HY C+VDL+GR+G+L E
Sbjct: 353 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 412
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I SMP+ + +VWR+LL A +VH N E+G AA+ + + P+ Y+LLSN++A
Sbjct: 413 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 472
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A +W DV KIR M + L + G S +EV +V++F + SHP IY+ + Q+ +
Sbjct: 473 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 532
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K GY PD VL D++E++K + L HS+K+A+AF LI SQ PIRI +NLR+C DC
Sbjct: 533 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 592
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT K IS+ REI+VRD RFH K+G CSC DYW
Sbjct: 593 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 169/338 (50%), Gaps = 11/338 (3%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ E + +I F + +A+ L+ +M G PD FT+ ++ AC +
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSVASW 200
L L G Q+H V ++G D+ V SL++MY KC V+ + +F+QM + +V SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 201 SAIIAAHASNGLWS-ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
+AII A+A +G E ++LF +M + RP SVL AC +L G+ +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHI-RPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 260 IR-NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++ I+++N V SLI MY + G +E F ++ +K ++Y+ ++ G A + + +EA
Sbjct: 183 VKLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVV 377
+F+E+ G+ + +LS + G + +G R +K Y+ + + ++
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALI 299
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ R G + A ++ M +N + W S+++ H
Sbjct: 300 SMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKH 336
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/560 (39%), Positives = 323/560 (57%), Gaps = 23/560 (4%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN +S L G M + +FRQ+ A +NT+I G ++ AL L
Sbjct: 457 WNIMMSSYL-------QIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLY 509
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
+M G + TF + L L G QIH V KVG D FV+NSLI+MY KC
Sbjct: 510 KMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCG 569
Query: 181 KVEFASAIFKQMDQKSV---------------ASWSAIIAAHASNGLWSECLKLFGEMNN 225
++E AS IFK + Q+S SWS++++ + NG + + LK F M
Sbjct: 570 EMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMIC 629
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
+ ++ L SV+SAC G L+LG+ HG + + L+V + +S+IDMYVKCG L
Sbjct: 630 SQV-EVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLN 688
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F D+ + ++ MISG A+HGQG+EA+ +F M+ EG+ P++V +VGVL+ACS
Sbjct: 689 DAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACS 748
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
HAGL+ EG F M+ Y I P +H+ C+VDL GRAG L E E I + I + VW
Sbjct: 749 HAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVW 808
Query: 406 RSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASK 465
RS LS+ +VH N+E+G K L ++ Y+L S++ A RW + AKIR+ M +
Sbjct: 809 RSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQR 868
Query: 466 GLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDV 525
G+ ++P S +++ +V+ FV DRSHP IY + ++ +LK GYS D++ V++DV
Sbjct: 869 GVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDV 928
Query: 526 DEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
++++++ L HS+KLAIA+ +I + G+PIR+ +NLR+C DCH + K S + REII+
Sbjct: 929 EQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIII 988
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RD RFH FK G CSC DYW
Sbjct: 989 RDIHRFHHFKHGHCSCADYW 1008
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 22/282 (7%)
Query: 22 GPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
GP N +L L + + L K++H VLK G + F ++L+ G M
Sbjct: 515 GPAFN-KLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM--YCKCGEM 571
Query: 82 DYACSIFRQIDEPGAF---------------DFNTLIRGFVKEVEFEEALFLYNEMFERG 126
+ A IF+ + + + +++++ G+V+ FE+AL ++ M
Sbjct: 572 EKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQ 631
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
VE D FT ++ ACA L+ G Q+HG++ K+G D+F+ +S+I+MY KC + A
Sbjct: 632 VEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAW 691
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
IF Q ++V W+++I+ A +G E ++LF M NE P E V VL+AC+H
Sbjct: 692 LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGI-TPNEVSFVGVLTACSHA 750
Query: 247 GALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEK 286
G L+ G C + L+R + + E T ++D+Y + G L +
Sbjct: 751 GLLEEG-CKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE 791
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 177/392 (45%), Gaps = 68/392 (17%)
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+++ A +F +I + F + LI GF + + L L+ +M ++GV P+ FT + K
Sbjct: 336 NLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLK 395
Query: 140 ACA-KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+C+ + + G IHG + + G + D + NS+++ Y KC +A +F M +K
Sbjct: 396 SCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTV 455
Query: 199 SWSAIIAAHASNGLWSECLKLF----------------GEMNNEKCWRPEESILVSVLSA 242
SW+ +++++ G + + LF G M N C R +L +++A
Sbjct: 456 SWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRN-GCERVALELLYKMVAA 514
Query: 243 ---------------CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ L L LGK H +++ + V SLIDMY KCG +EK
Sbjct: 515 GPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKA 574
Query: 288 LCLFRMMADKCQL---------------TYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+F+ + + + ++S M+SG +G+ ++AL FS M+ +E
Sbjct: 575 SVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEV 634
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG---------CVVDLMGRA 383
D V+SAC+ AG+ ++L ++ +Q G ++D+ +
Sbjct: 635 DKFTLTSVVSACASAGV----------LELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
G L +A LI + +N V+W S++S +H
Sbjct: 685 GSLNDAW-LIFNQAKDRNVVLWTSMISGCALH 715
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 98/174 (56%), Gaps = 4/174 (2%)
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K G C N L+N+Y K + +E A +F+++ Q V SW+ +I+ A GL
Sbjct: 310 LHAKLIKNG--CVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACT-HLGALDLGKCTHGSLIRNISALNVIVE 271
++ L LF +M ++ P + L VL +C+ ++ +GK HG ++RN L+ ++
Sbjct: 368 SADVLGLFTKMQDQGVC-PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLN 426
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
S++D YVKC C LF +MA+K +++++M+S G ++++ +F ++
Sbjct: 427 NSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQL 480
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H LI+N I L+++Y K LE+ +F + +++V+ISG A G
Sbjct: 311 HAKLIKN--GCVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLS 368
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ L +F++M +G+ P+ VL +CS
Sbjct: 369 ADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 335/578 (57%), Gaps = 14/578 (2%)
Query: 35 LTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSI 87
+ +L C +L E+ K++HAH+++ + S++ + AL+ G+ A +
Sbjct: 234 MNVLSACGSLAALEKGKQIHAHIVESEYH------SDVRVSTALTKMYMKCGAFKDAREV 287
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + +NT+IRGFV + EEA ++ M E GV PD T+ + ACA+ L
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGL 347
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G +IH K G D+ N+LINMY K ++ A +F +M ++ V SW+ ++ +
Sbjct: 348 ARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRY 407
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A E F +M + + + + VL AC++ AL GK H +++ +
Sbjct: 408 ADCDQVVESFTTFKQMLQQGV-KANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD 466
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ V +L+ MY KCG +E + +F M+ + +T++ +I GL +G+G EAL + M
Sbjct: 467 LAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKS 526
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
EG+ P+ +V VLSAC LV EG F M +Y IVPT +HY C+VD++ RAG L
Sbjct: 527 EGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLR 586
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA ++I ++P++ + +W +LL+A ++H N+EIGE AA++ ++ + YV LS +YA
Sbjct: 587 EAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYA 646
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
A W DVAK+R M +G+ + PG S +E+A +V+ FV++D+SHP IY + ++
Sbjct: 647 AAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKK 706
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
Q+K GY PD V+ D+D++ K + HS+KLAIA+ LI G+PIRI++NLR+C D
Sbjct: 707 QMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTD 766
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CHT TK IS I +REII RD RFH FK+G CSC DYW
Sbjct: 767 CHTATKFISKITKREIIARDAHRFHHFKNGECSCGDYW 804
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 200/392 (51%), Gaps = 12/392 (3%)
Query: 21 KGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
KGP+++ + + +L++C K+L K+VH H+L+ G N + + L+ A H
Sbjct: 22 KGPQVD----SYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA--H 75
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
GS++ A +F + +N +I G+ +EA L+ M + +EPD FTF ++
Sbjct: 76 CGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSI 135
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
AC+ L G +IH V + G D V N+LI+MY KC V A +F M +
Sbjct: 136 LSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDE 195
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+ + A+A +G E LK + M E+ RP ++VLSAC L AL+ GK H
Sbjct: 196 VSWTTLTGAYAESGYGEESLKTYHAMLQERV-RPSRITYMNVLSACGSLAALEKGKQIHA 254
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
++ + +V V T+L MY+KCG + +F ++ + + ++ MI G GQ +E
Sbjct: 255 HIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEE 314
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A F ML EG+ PD Y VLSAC+ G + G R + +V V+ ++
Sbjct: 315 AHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALI 373
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++ +AG + +A ++ MP +++ V W +LL
Sbjct: 374 NMYSKAGSMKDARQVFDRMP-KRDVVSWTTLL 404
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 125/232 (53%), Gaps = 1/232 (0%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
+ +G + D++ + L ++C K + L G Q+H H+ + G + ++++ N+L+ +Y C
Sbjct: 19 LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V A +F + KSV SW+ +I+ +A GL E LF M E+ P++ VS+LS
Sbjct: 79 VNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERL-EPDKFTFVSILS 137
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC+ L+ G+ H ++ A + V +LI MY KCG + +F MA + +++
Sbjct: 138 ACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS 197
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++ + A G G+E+L + ML+E + P + Y+ VLSAC + +G
Sbjct: 198 WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/617 (35%), Positives = 338/617 (54%), Gaps = 56/617 (9%)
Query: 31 EQECLTILKTCKN-LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS-MDYACSIF 88
E+ L++L C L+ K++H H+ G +PF L+ CA+S ++Y+ +F
Sbjct: 9 EEILLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLF 68
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQAL 147
P F +NTLIR +L + ++ + PD+F+F K A
Sbjct: 69 HHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCS 128
Query: 148 K-EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
K +G+Q+H H F+ GF+ +FV +LI+MY +C E+A +F +M Q +V +W+A++ A
Sbjct: 129 KRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTA 188
Query: 207 HASNGLWSECLKLFG---------EMNNEKCW---------------------------- 229
G+W FG +M ++ W
Sbjct: 189 CFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRN 248
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
RP E L VLSAC GA + GK HG + + V V +LID Y KCG +
Sbjct: 249 RPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNV----- 303
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
D +L +++ LAMHG+ EA+ +F EM G+ PD V ++ +L ACSH+GL
Sbjct: 304 ------DMAKLVFNI---SLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGL 354
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V +G F +M+ Y I P ++HYGC+VDL GRA L +A E I+ MPI N ++WR+LL
Sbjct: 355 VEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLL 414
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
A +H N+E+ E+ L +++ ++ D+VLLSN+YA A +W DVA IR M + + +
Sbjct: 415 GACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKK 474
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK-FEGYSPDISQVLRDVDED 528
PG+S++E+ + Y FV+ ++ + ++ + ++ +L+ EGY+P + VL DV+E+
Sbjct: 475 IPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEEE 534
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK + + HS+KLA AF + L +G +RI +NLR+C DCHT KLIS +Y+ EIIVRDR
Sbjct: 535 EKEDSMSKHSEKLAAAFGIAKLPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDR 594
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH FK G CSCRDYW
Sbjct: 595 SRFHSFKGGFCSCRDYW 611
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 317/543 (58%), Gaps = 38/543 (6%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL----KEGMQIHG 155
+ LIR + AL LY + G+ P T P+L K+ A A+ + + +H
Sbjct: 57 DALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHA 116
Query: 156 HVFKVGFECDLFVQNSLINMYG--------------------------------KCEKVE 183
H ++G L V N+LI ++ + +V
Sbjct: 117 HAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVA 176
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A ++F +M +++ SWSA++ + G E L +F +M + RP++++LV VL+AC
Sbjct: 177 DARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGV-RPDDTVLVGVLAAC 235
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
LGAL+ GK HG L N + V + T+L+DMY KCG ++ G+ +F M DK L ++
Sbjct: 236 AQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWT 295
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI GLAMHG+G ++L++FS+M G++PDD+ ++G L AC+H GLV++G F+ M
Sbjct: 296 TMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNN 355
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y I P ++HYGC+VDL+ R G+L EA ++++ MP++ + ++W +L++ + H N+E+ E
Sbjct: 356 YGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEY 415
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
K+ ++ YVLL N+Y+ + R +IR M KG+ ++PG S VE+ ++
Sbjct: 416 VIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIH 475
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKF-EGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
+F+ D SHP +I ++++ +++ EGY PD +VL D++E+E L HS+KLA
Sbjct: 476 QFIVGDLSHPRIKDILTKWYEIDSRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLA 535
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAFALI PIRI +NLR+C DCH TKLIS +Y REIIVRDR RFH FKDGTCSC+
Sbjct: 536 IAFALISTEDYMPIRIVKNLRVCQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCK 595
Query: 603 DYW 605
DYW
Sbjct: 596 DYW 598
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 6/236 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A S+F ++ E A ++ ++ G+V+ + EAL ++++M +GV PD+ +
Sbjct: 173 GRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVL 232
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
ACA+L AL++G +HG++ +F+ +L++MY KC +V+ +F+ M K+V
Sbjct: 233 AACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVL 292
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I A +G S+ L LF +M + +P++ + L ACTH G +D G+ S
Sbjct: 293 AWTTMIKGLAMHGRGSDSLTLFSQMESSGV-KPDDIAFIGALCACTHTGLVDKGRELFNS 351
Query: 259 LIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
++ N I ++D+ + G L + R M +K + +I G M G
Sbjct: 352 MVNNYGIKPKIEHYGCMVDLLARNGLLSEA----RDMVEKMPMKPDALIWGALMAG 403
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 39/267 (14%)
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA-- 242
A+ + + ++S A+I AHAS+G L L+ + + P L S+L +
Sbjct: 41 AALVTSGLLRRSAELHDALIRAHASSGRPQAALPLYAHLIRAGLF-PTPHTLPSLLKSLA 99
Query: 243 -------------CTHLGALDLGKC-----------THGSLIRNISALNVIVETS----- 273
H A+ LG H L+ ++ ++++ TS
Sbjct: 100 LSPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLLRTSAAVDA 159
Query: 274 -----LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
LI + + G + LF M ++ +++S M++G G G+EAL +FS+M +
Sbjct: 160 STFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQAQ 219
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+ PDD V VGVL+AC+ G + +G +K I TV +VD+ + G +
Sbjct: 220 GVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKAN-NIRMTVFLGTALVDMYAKCGEVQL 278
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
+E+ + M +N + W +++ +H
Sbjct: 279 GMEVFEGMK-DKNVLAWTTMIKGLAMH 304
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/527 (39%), Positives = 315/527 (59%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ +F ++ + ++I G + EEALF++ +M GVEP TF +
Sbjct: 150 GRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVL 209
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
ACA G+Q+HGHV K+G F+ SLI Y C K+E A IF + K+V
Sbjct: 210 SACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVV 269
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
W+A++ A+ N + L++FG+M P +S L AC L ALD GK H
Sbjct: 270 KWTALLTAYVWNNKHQDALRVFGDMTKMGAL-PNQSTFSITLKACCGLEALDKGKEIHTM 328
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I+ +V V SL+ MY +CG + + +FR + +K ++++ +I G A HG G A
Sbjct: 329 AIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWA 388
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L F++M+R G++P+++ + G+LSACS +G++ +G F+ + V QHY C+VD
Sbjct: 389 LIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVD 448
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
++GR G L EA EL++ MP++ N ++W +LLSA +VH NLE+ E AAK++ + + S
Sbjct: 449 ILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSA 508
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA A RW DV+++R +M GL + PG S V + K ++F+S DRSHP + I
Sbjct: 509 YVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERI 568
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YE + + +LK GY PD L DV++++K E L HS++LAIAF L+ +GS I +
Sbjct: 569 YEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITV 628
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ KL+S I R+I+VRD RFH FK+G CSC DYW
Sbjct: 629 MKNLRVCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 151/307 (49%), Gaps = 20/307 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ 90
+L C N EF +VH HV+K G F++ F + +L+ A C +++A IF +
Sbjct: 208 VLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCM-----KIEHAHKIFNE 262
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ L+ +V + ++AL ++ +M + G P+ TF KAC L+AL +G
Sbjct: 263 TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKG 322
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+IH K+G E D+FV NSL+ MY +C V A A+F+ +++K + SW++II A +
Sbjct: 323 KEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQH 382
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G L F +M P E +LSAC+ G L G+C + R S NV+
Sbjct: 383 GFGLWALIFFNQMIRRGV-DPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKS--NVLR 439
Query: 271 E---TSLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQGKEALSIFSEML 326
++D+ +CG L++ L R M K + + ++S +H + A +L
Sbjct: 440 PQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHIL 499
Query: 327 REGLEPD 333
LEP+
Sbjct: 500 --DLEPN 504
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 102/192 (53%), Gaps = 13/192 (6%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+L + +I Y + +++ A +F +M + V SW+++I G +LF EM
Sbjct: 42 NLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEM- 100
Query: 225 NEKCWRPEESIL--VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
PE++++ ++++ G ++L + L ++ +V +++ Y + G
Sbjct: 101 ------PEKNVISWTTMVNGYLKFGRVELAQ----RLFLDMHVKDVAAWNAMVHGYFENG 150
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+E+G+ LF M + ++++ MI GL ++G+ +EAL +F +MLR G+EP + VLS
Sbjct: 151 RVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLS 210
Query: 343 ACSHAGLVNEGL 354
AC++A N G+
Sbjct: 211 ACANAVEFNLGV 222
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 332/563 (58%), Gaps = 5/563 (0%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
++ KK+HA VL+ GF + L+ + G M YA +F ++ +P F +NTL +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVV--IGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+V+ E+L LY +M + GV PD FT+P + KA ++L G +H HV K GF C
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V L+ MY K ++ A +F+ M K + +W+A +A G + L+ F +M
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + + +VS+LSAC LG+L++G+ + + N+IVE + +DM++KCG
Sbjct: 203 ADAV-QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
E LF M + +++S MI G AM+G +EAL++F+ M EGL P+ V ++GVLSAC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 345 SHAGLVNEGLLCFDRM--KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
SHAGLVNEG F M + + P +HY C+VDL+GR+G+L EA E I+ MP++ +
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+W +LL A VH ++ +G+ A L + S +VLLSN+YA A +W V K+R++M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G + +S VE K++ F D+SHP IYE + ++ +++ GY PD V
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DV+ +EK L HS+KLAIAF LI G PIR+ +NLR C+DCH ++K +S + E
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
II+RD+ RFH F++G CSC+++W
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/575 (38%), Positives = 333/575 (57%), Gaps = 7/575 (1%)
Query: 35 LTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++IL C +L K +H +K + + LV+ A G A + F ++
Sbjct: 434 MSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYA--KCGFFTAALTTFNRM 491
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N+LI G+ + + A+ ++ ++ + PD T + ACA L L +G
Sbjct: 492 SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGT 551
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASN 210
IHG + K+GFE D V+N+LI+MY KC + A +F + D K +W+ IIAA+ N
Sbjct: 552 CIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQN 611
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G E + F +M E + P VSVL A +L A G H +I+ N +V
Sbjct: 612 GHAKEAISSFHQMRLEN-FHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLV 670
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SLIDMY KCG L LF M K ++++ M+SG A+HG G A+++FS M +
Sbjct: 671 GNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQV 730
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D V +V VLSAC H GLV EG F M +Y I P ++HY C+VDL+GRAG+ E L
Sbjct: 731 QIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETL 790
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
I+ MP++ + VW +LL + ++H N+++GE+A +L ++ +P+ +V+LS++YA++
Sbjct: 791 GFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSG 850
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
RW D K R++M GL ++PG S VE+ KV+ F D+SHP ++++ + + + +++
Sbjct: 851 RWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL++V+E++K L HS++LAI FAL++ GS I+I +NLR+C DCHT
Sbjct: 911 KIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHT 970
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I R IIVRD RFH F+DG CSC DYW
Sbjct: 971 TTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 146/604 (24%), Positives = 262/604 (43%), Gaps = 66/604 (10%)
Query: 13 LTQPEEPPKGPE----LNLRLKEQECLTILK----TCK--NLEEFKKVHAHVLKWGFFWN 62
L+Q E+P + + + L E +++L CK N+E + +H +V + F +
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDF--S 262
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
++ L+ S G +D A +F Q+ + + T++ G+ F E L L+++M
Sbjct: 263 SAVSNGLIDL--YSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
V + + + F A A+ L++G +IHG + + D+ V L+ MY KC +
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGET 380
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E A +F + + + +WSAIIAA G E L LF EM N+K +P L+S+L A
Sbjct: 381 EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK-MKPNRVTLMSILPA 439
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C L L LGK H ++ ++ T+L+ MY KCG L F M+ + +T+
Sbjct: 440 CADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTW 499
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I+G A G A+ +F ++ + PD VGV+ AC+ +++G C + +
Sbjct: 500 NSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG-TCIHGLIV 558
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ ++D+ + G L A L +++V W ++ A+ + +
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII-AAYMQNGHAKEA 617
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL--------NQSPGFS 474
I++ + ++ + HP+ +S + A A +A R MA N G S
Sbjct: 618 ISSFHQMRLENFHPNSVTFVSVLPAAAY----LAAFREGMAFHACIIQMGFLSNTLVGNS 673
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQ--MEWQLKFEGYSPDISQVLRDVDEDEKRE 532
L+++ K + ++ EM H+ + W GY+
Sbjct: 674 LIDMYAKCGQLXYSEKL------FNEMDHKDTVSWNAMLSGYA----------------- 710
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
+ GH + A AL L Q S ++I D ++ ++S ++ RK FH
Sbjct: 711 -VHGHGDR---AIALFSLMQESQVQI--------DSVSFVSVLSACRHXGLVEEGRKIFH 758
Query: 593 RFKD 596
D
Sbjct: 759 SMSD 762
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 150/289 (51%), Gaps = 6/289 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L +CK+L ++HA ++ GF + ++L+ +L H D A S+F P
Sbjct: 38 LLSSCKHLNPLLQIHAQIIVSGF-KHHHSITHLINLYSLFH--KCDLARSVFDSTPNPSR 94
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N++IR + + ++ EAL +Y M E+G+EPD +TF + KAC L+EG+ HG
Sbjct: 95 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGE 154
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ + G E D+F+ L++MY K ++ A +F +M ++ V +W+A+IA + + E
Sbjct: 155 IDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEA 214
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+ F M P L+++ L ++L + HG + R + V LID
Sbjct: 215 VDFFRSMQLVGV-EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGLID 271
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+Y KCG ++ +F M D+ +++ M++G A +G E L +F +M
Sbjct: 272 LYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 13/280 (4%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+P L +C L L +QIH + GF+ + + LIN+Y K + A ++F
Sbjct: 35 YPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVFDSTP 90
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL-- 251
S W+++I A+ + ++E L+++ M EK P++ VL ACT GAL+L
Sbjct: 91 NPSRILWNSMIRAYTRSKQYNEALEMYYCMV-EKGLEPDKYTFTFVLKACT--GALNLQE 147
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G HG + R +V + L+DMY K G L++ +F M + + ++ MI+GL+
Sbjct: 148 GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQ 207
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
EA+ F M G+EP V + + + LC +R +
Sbjct: 208 SEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE---LCRSIHGYVFRRDFSSA 264
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++DL + G + A + M + Q+DV W ++++
Sbjct: 265 VSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 333/558 (59%), Gaps = 4/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K++H + ++ GF ++ LV A GS++ A +F + E +N++I +V
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYA--KCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +EA+ ++ +M + GV+P + + ACA L L+ G IH ++G + ++
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLI+MY KC++V+ A+++F ++ +++ SW+A+I A NG + L F +M + +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-R 432
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P+ VSV++A L K HG ++R+ NV V T+L+DMY KCG +
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F MM+++ T++ MI G HG GK AL +F EM + ++P+ V ++ V+SACSH+
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV GL CF MK Y I ++ HYG +VDL+GRAG L EA + I MP++ V+ +
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
+L A ++H N+ E AA+ LF++N +VLL+N+Y A W V ++R M +GL
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S+VE+ +V+ F S +HP IY + ++ +K GY PD + VL V+
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVEN 731
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
D K + L HS+KLAI+F L++ + G+ I + +NLR+C DCH TK IS++ REI+VRD
Sbjct: 732 DVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRD 791
Query: 588 RKRFHRFKDGTCSCRDYW 605
+RFH FK+G CSC DYW
Sbjct: 792 MQRFHHFKNGACSCGDYW 809
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 171/323 (52%), Gaps = 3/323 (0%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E +L+ C +L+E +++ V K G + F + LV+ +GS+D A +F
Sbjct: 37 EHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL--FCRYGSVDEAARVFEP 94
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
ID ++T+++GF K + ++AL + M VEP + F L K C L+ G
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+IHG + K GF DLF L NMY KC +V A +F +M ++ + SW+ I+A ++ N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G+ L++ M E +P +VSVL A + L + +GK HG +R+ V +
Sbjct: 215 GMARMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+DMY KCG LE LF M ++ ++++ MI + KEA+ IF +ML EG+
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 331 EPDDVVYVGVLSACSHAGLVNEG 353
+P DV +G L AC+ G + G
Sbjct: 334 KPTDVSVMGALHACADLGDLERG 356
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 316/581 (54%), Gaps = 45/581 (7%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN + N +H G MD A S+F + +N +I G+ + +AL L++
Sbjct: 233 WNAMVSLN-------THLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFS 285
Query: 121 EMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
M E + PD FT ++ ACA L ++ G Q+H ++ + + V N+LI+ Y K
Sbjct: 286 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 345
Query: 180 EKVEFASAIFKQ---------------------------------MDQKSVASWSAIIAA 206
VE A I Q M+ + V +W+A+I
Sbjct: 346 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 405
Query: 207 HASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NG E + LF M C P L +VLS C L LD GK H IR++
Sbjct: 406 YEQNGRNDEAIDLFRSMIT--CGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V ++I MY + G +F + K +T++ MI LA HGQG+EA+ +F E
Sbjct: 464 RSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 523
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
MLR G+EPD + YVGVLSACSHAG VNEG +D++K E++I P + HY C+VDL+ RAG
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ EA E I+ MP++ + + W SLLSA +VH N E+ E+AA+ L I+ ++ Y ++N
Sbjct: 584 LFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIAN 643
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+Y+ RW D A+I K + + GFS + K++ F + D HP D +Y M +
Sbjct: 644 VYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAAR 703
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M ++K G+ PD+ VL DVD++ K E L HS+KLAIAF LI + + +R+ +NLR+
Sbjct: 704 MWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRV 763
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CNDCH K IS + +REIIVRD RFH F+DG CSC+DYW
Sbjct: 764 CNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 186/424 (43%), Gaps = 79/424 (18%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
N F ++L++ A S G + A +F ++ E A + ++ G + F EA+ +
Sbjct: 97 NVFTWNSLLSMFAKS--GRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLD 154
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G P FT + +CA QA G ++H V K+G + V NS++NMYGKC
Sbjct: 155 MTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGD 214
Query: 182 VEFASAIFKQMDQKSVA-------------------------------SWSAIIAAHASN 210
E AS +F++M +SV+ SW+A+IA + N
Sbjct: 215 AETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQN 274
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA----- 265
GL ++ LKLF M +E P+E + SVLSAC +LG + +GK H ++R A
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 266 ----------------------------LNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
LNVI T+L++ YVK G +E +F +M ++
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+ ++ MI G +G+ EA+ +F M+ G EP+ VLS C+ L C
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA-------SLACL 447
Query: 358 DRMK-LEYRIVPTVQHYG-----CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
D K + R + ++ ++ + R+G A + + ++ + W S++ A
Sbjct: 448 DYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 507
Query: 412 SKVH 415
H
Sbjct: 508 LAQH 511
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/564 (37%), Positives = 327/564 (57%), Gaps = 5/564 (0%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
NL+ K +H +VL G + ++ V S G ++ A +F ++ +N +
Sbjct: 246 NLKLGKCMHGYVLGLGLGNDILVLTSFVDM--YSKMGDIESARWVFYKMPTRNLVSWNAM 303
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I G V+ E+ L++ + D T +L + C++ +L G +HG + F
Sbjct: 304 ISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SF 362
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
E +L + +++++Y KC ++ A+ +F +M ++V +W+A++ A NG + L+LF +
Sbjct: 363 ESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQ 422
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E VS++ +C HLG+L G+ HG L R A +++ T+L+DMY KCG
Sbjct: 423 MQEEGI-AANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCG 481
Query: 283 CLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
+ +F + K + ++ MI+G MHG G +A+ I+ +M+ EGL+P+ ++ +L
Sbjct: 482 KINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLL 541
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SACSH+ LV +G+ F+ M+ ++ I P +HY C+VDL+ RAG EA LI+ MP Q
Sbjct: 542 SACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPG 601
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
V +LLS + H N+ +G + L +++ +P Y++LSN+YA A+RW V IR
Sbjct: 602 TAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGL 661
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M ++GL ++PG+SLVE V+ F + D SHP W+ IY + + ++ GY PD S V
Sbjct: 662 MRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCV 721
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
LRDVDE+ K L GHS++LAIAF L+ GS IRI +NLR+C DCHT TK IS I +R
Sbjct: 722 LRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKR 781
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRD RFH F +G CSC DYW
Sbjct: 782 EIIVRDANRFHHFSNGECSCGDYW 805
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 205/396 (51%), Gaps = 14/396 (3%)
Query: 26 NLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
NL + C LK C + +++ ++ + ++ G N F S++++ L +G +
Sbjct: 125 NLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISF--LVKFGKIG 182
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + +N++I G+V+ F+ A L+ EM G++P T +L +AC
Sbjct: 183 EAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACG 242
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ LK G +HG+V +G D+ V S ++MY K +E A +F +M +++ SW+A
Sbjct: 243 GIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNA 302
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ NGL E LF + + + +VS+L C+ +L GK HG IR+
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGF-DLTTIVSLLQGCSQTASLATGKILHGCAIRS 361
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ N+I+ T+++D+Y KCG L++ +F M D+ +T++ M+ GLA +G ++AL +F
Sbjct: 362 FES-NLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLF 420
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDL 379
++M EG+ + V +V ++ +C+H G + G R+ + IV +VD+
Sbjct: 421 AQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMT----ALVDM 476
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G + A + I ++ V+W S+++ +H
Sbjct: 477 YAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 179/379 (47%), Gaps = 13/379 (3%)
Query: 35 LTILK-TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
L++L+ + KNL K HA ++ + F A+ LV A S S++ A +F Q +
Sbjct: 35 LSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVK--AYSDLRSLEAARYVFDQFFQ 92
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P N ++ G+++ + E L L+ M R +E D+ + KACA + GM+I
Sbjct: 93 PKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEI 152
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
+ G E + FV +S+I+ K K+ A +F M K V W++II + G +
Sbjct: 153 ISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCF 212
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+LF EM+ +P + S++ AC +G L LGKC HG ++ +++V TS
Sbjct: 213 DVAFQLFFEMHGSGI-KPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTS 271
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
+DMY K G +E +F M + ++++ MISG +G E+ +F ++R D
Sbjct: 272 FVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFD 331
Query: 334 DVVYVGVLSACSHAGLVNEGLL---CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
V +L CS + G + C R I+ T +VDL + G L +A
Sbjct: 332 LTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTA-----IVDLYSKCGSLKQAT 386
Query: 391 ELIQSMPIQQNDVVWRSLL 409
+ M +N + W ++L
Sbjct: 387 FVFNRMK-DRNVITWTAML 404
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 342/580 (58%), Gaps = 19/580 (3%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASN----LVATCALSHWGSMDYACSIFR 89
+LK C L + K+ VH H++ F N N + A C GS++ A +F
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMN-SKFRNDLVIKNSILFMYAKC-----GSLEIARQVFD 150
Query: 90 QIDEPGAFDFNTLIRGFVKE---VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
++ + ++I G+ ++ AL L+ EM G+ P+ F +L K C L +
Sbjct: 151 EMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGS 210
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+G QIHG +K GF+ ++FV +SL++MY +C ++ + +F +++ K+ SW+A+I+
Sbjct: 211 CVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISG 270
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
A G E L LF +M E + E ++L + + G+L+ GK H ++++ L
Sbjct: 271 FARKGEGEEALGLFVKMQREG-FGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKL 329
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM- 325
V +L+ MY K G + +F + ++ + M+ G A HG GKEA+ +F EM
Sbjct: 330 VGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMM 389
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
L +EP+D+ ++ VL+ACSHAGL++EGL F+ MK +Y + P + HY VVDL GRAG+
Sbjct: 390 LWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK-KYGLEPKLSHYTTVVDLFGRAGL 448
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L +A I+ MPI+ N +W +LL ASK+H N E+G AA+ + +++ +P + LLSN+
Sbjct: 449 LDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNI 508
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA A +W DVAK+R EM GL + P S VE+ V+ F + D SHP + +YEM +
Sbjct: 509 YASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENL 568
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
++K GY PD S V VD+ EK L+ HS+KLA+AFAL++ GS IRI +N+R+C
Sbjct: 569 NQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNIRVC 628
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH+ K +S++ +REIIVRD RFH F+DG+CSCRDYW
Sbjct: 629 GDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 160/323 (49%), Gaps = 40/323 (12%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+EPD + L K C L LK+G +H H+ F DL ++NS++ MY KC +E A
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSE---CLKLFGEMNNEKCWRPEESILVSVLSAC 243
+F +M K V +W+++I ++ +G S L LF EM + RP E L S++ C
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGL-RPNEFALSSLVKCC 205
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
LG+ GK HG + NV V +SL+DMY +CG L + +F + K +++++
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWN 265
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG---------- 353
+ISG A G+G+EAL +F +M REG + Y +L + S G + +G
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325
Query: 354 ---LLCF----------------DRMKLEYRIVPTVQHYGCVVDLMGRA--GMLGEALEL 392
L+ + D K+ R+V V C L+G A G+ EA+EL
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV-KVDVVSCNSMLIGYAQHGLGKEAVEL 384
Query: 393 IQSM----PIQQNDVVWRSLLSA 411
+ M I+ ND+ + S+L+A
Sbjct: 385 FEEMMLWVEIEPNDITFLSVLTA 407
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
++ N P+ +I +L CT LG L GK H L+ + +++++ S++ MY KC
Sbjct: 80 DLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKC 139
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHG---QGKEALSIFSEMLREGLEPDDVVYV 338
G LE +F M K +T++ MI+G + G AL +F EM+R+GL P++
Sbjct: 140 GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALS 199
Query: 339 GVLSACSHAGLVNEGLLCFDRMKL-----EYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++ C G C D ++ +Y V +VD+ R G L E+ +
Sbjct: 200 SLVKCCGFLG------SCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVF 253
Query: 394 QSMPIQQNDVVWRSLLSA 411
+ +N+V W +L+S
Sbjct: 254 DELE-SKNEVSWNALISG 270
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/606 (35%), Positives = 350/606 (57%), Gaps = 38/606 (6%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT+ +N + +++HAH+++ N + LV S G ++YA IF ++ E
Sbjct: 486 LTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHM--YSECGRLNYAKEIFNRMAER 543
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A+ +N++I G+ + E +EAL L+ +M G++PD F+ ++ +C L ++G ++H
Sbjct: 544 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH 603
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEF------------------------------ 184
+ + E + +Q L++MY KC +++
Sbjct: 604 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRAN 663
Query: 185 -ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F QM+Q++ A W++I+A +A+ GL E F EM E + +V++++ C
Sbjct: 664 DAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEM-LESDIEYDVLTMVTIVNLC 722
Query: 244 THLGALDLGKCTHGSLI-RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
+ L AL+ G H +I + +V++ET+L+DMY KCG + K +F M K +++
Sbjct: 723 SSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSW 782
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MISG + HG KEAL ++ EM ++G+ P++V ++ +LSACSH GLV EGL F M+
Sbjct: 783 NAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQE 842
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y I +HY C+VDL+GRAG L +A E ++ MPI+ W +LL A +VH ++++G
Sbjct: 843 DYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGR 902
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
+AA+ LF+++ +P YV++SN+YA A RW +V IR M KG+ + PG S +E+ ++
Sbjct: 903 LAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEI 962
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS---QVLRDVDEDEKRERLKGHSQ 539
F + ++HP + IY + + Q K GY PD S Q ++D+ E+E+ E L HS+
Sbjct: 963 QIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSE 1022
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
+LA++ LI L + S IR+ +NLR+C DCHT TK IS I R II RD RFH F++G C
Sbjct: 1023 RLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKC 1082
Query: 600 SCRDYW 605
SC DYW
Sbjct: 1083 SCGDYW 1088
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 229/449 (51%), Gaps = 25/449 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++K C +E+ +++ + V+K G N F LV A W MD A + +I+
Sbjct: 180 SVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGW--MDDAVTSLDEIE 237
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N +I G+VK + +EEA +++ M + GV PDNFTF + + C L++ G Q
Sbjct: 238 GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQ 297
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + GF+ D FV N+LI+MY KC+ E +F +M +++ +W++II+A A G
Sbjct: 298 VHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGH 357
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+++ L LF M E ++ L S+L A L + G+ HG L+RN+ ++I+ +
Sbjct: 358 FNDALVLFLRM-QESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGS 416
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLE 331
+L+DMY KCG +E+ +FR + ++ +++Y+ +++G G+ +EAL ++ +M E G++
Sbjct: 417 ALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQ 476
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD + +L+ C++ N+G + + I + +V + G L A E
Sbjct: 477 PDQFTFTTLLTLCANQRNDNQGRQIHAHL-IRANITKNIIVETELVHMYSECGRLNYAKE 535
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF---QINSHHPSDYVLLSNMYAR 448
+ M ++N W S++ N E E A LF Q+N P D LS+M +
Sbjct: 536 IFNRMA-ERNAYSWNSMIEG--YQQNGETQE--ALRLFKQMQLNGIKP-DCFSLSSMLSS 589
Query: 449 AQRWYDVAK--------IRTEMASKGLNQ 469
D K +R M +G+ Q
Sbjct: 590 CVSLSDSQKGRELHNFIVRNTMEEEGILQ 618
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 185/387 (47%), Gaps = 21/387 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD---YACSIFR 89
++++ C + F K +H ++ G+ + + + ++ A S G +D YA +F
Sbjct: 76 SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS--GCLDDLCYARKLFE 133
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ E +NT+I + + ++ E L LY M G D FTFP++ KAC ++ +
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGG 193
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
Q+ V K G C+LFV +L++ Y + ++ A +++ SV +W+A+IA +
Sbjct: 194 VRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK 253
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
W E +F M P+ S L C L + D GK H LI +
Sbjct: 254 ILSWEEAWGIFDRMLKIGVC-PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTF 312
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LIDMY KC E L +F M ++ Q+T++ +IS A G +AL +F M G
Sbjct: 313 VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESG 372
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV-----VDLMGRAG 384
+ + +L A AGL + G +L +V + + + VD+ + G
Sbjct: 373 YKSNRFNLGSILMAS--AGLADIG----KGRELHGHLVRNLLNSDIILGSALVDMYSKCG 426
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSA 411
M+ EA ++ +S+ +++N+V + +LL+
Sbjct: 427 MVEEAHQVFRSL-LERNEVSYNALLAG 452
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 329/572 (57%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L+TC + E +++H+ +K GF + + + L+ S +G +D A I I+E
Sbjct: 351 MLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDM--YSKYGWLDKAQRILDMIEE 408
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+V+ +EAL + EM G+ PDN + ACA ++A+ +G QI
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQI 468
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V+ G+ D+ + N L+ +Y +C + A + F+ ++ K +W+ +I+ A +GL+
Sbjct: 469 HARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLY 528
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E LK+F +M+ + VS +SA +L + GK H +I+ + +
Sbjct: 529 EEALKVFMKMDQAGA-KYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNA 587
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI +Y KCG +E F M + +++++ +I+ + HG+G EAL +F +M ++GL+P
Sbjct: 588 LISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPS 647
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV +VGVL+ACSH GLV EGL F M E+ I P HY CVVD++GRAG L A +
Sbjct: 648 DVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFV 707
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ MPI + +VWR+LLSA KVH NLEIGE AAK+L ++ H + YVLLSN YA +W
Sbjct: 708 EEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWA 767
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+IR M +G+ + PG S +EV V+ F DR HP D IY + + +L G
Sbjct: 768 SRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIG 827
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y + + + +++ K HS+KLA+AF L+ L P+R+ +NLR+CNDCHT+ K
Sbjct: 828 YKQENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMK 887
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S + REI++RD RFH F +G+CSC DYW
Sbjct: 888 FTSGVMGREIVLRDVYRFHHFNNGSCSCGDYW 919
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 181/386 (46%), Gaps = 22/386 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C E F + +H V K GFF F + L+ S+ C FR D
Sbjct: 148 SILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALI---------SLYLRCRSFRLAD 198
Query: 93 EP-------GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+ FNTLI G + + AL +++EM G+ PD+ T +L AC+ +
Sbjct: 199 RVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG 258
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
L++G Q+H ++ K G D ++ SL+++Y K +E A IF D+ +V W+ ++
Sbjct: 259 DLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLV 318
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A+ ++ +F M RP + +L CTH G + LG+ H I+N
Sbjct: 319 AYGQIDDLAKSFDIFYRMLAAGV-RPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
++ V LIDMY K G L+K + M+ +K ++++ MI+G H KEAL F EM
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
G+ PD++ +SAC+ V++G R+ + V + +V L R G+
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVS-GYSADVSIWNGLVYLYARCGI 496
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA 411
EA +++ + + W L+S
Sbjct: 497 SKEAFSSFEAIE-HKEGITWNGLISG 521
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 187/388 (48%), Gaps = 18/388 (4%)
Query: 36 TILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C +L + K++H+++LK G + +L+ S G ++ A IF D
Sbjct: 249 SLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKS--GDIEEALQIFDSGD 306
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N ++ + + + ++ ++ M GV P+ FT+P + + C + G Q
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ 366
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K GF+ D++V LI+MY K ++ A I +++K V SW+++IA + +
Sbjct: 367 IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEF 426
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L+ F EM W P+ L S +SAC + A+ G H + + + +V +
Sbjct: 427 CKEALETFKEMQACGIW-PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWN 485
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
L+ +Y +CG ++ F + K +T++ +ISG A G +EAL +F +M + G +
Sbjct: 486 GLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKY 545
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT-----VQHYGCVVDLMGRAGMLG 387
+ +V +SA ++ + +G ++ R++ T + ++ L G+ G +
Sbjct: 546 NVFTFVSSISASANLADIKQG------KQIHARVIKTGYTSETEISNALISLYGKCGSIE 599
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
+A M ++N+V W ++++ H
Sbjct: 600 DAKMDFFEM-TKRNEVSWNTIITCCSQH 626
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 163/338 (48%), Gaps = 5/338 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + ++ G+ + EEA+ LY EM GV P + ++
Sbjct: 91 GFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSIL 150
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC K + + G IH V+K GF + FV N+LI++Y +C A +F M
Sbjct: 151 SACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSV 210
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+++ +I+ HA G L +F EM P+ + S+L+AC+ +G L GK H
Sbjct: 211 TFNTLISGHAQCGHGDRALGIFDEMQLSGL-SPDSVTIASLLAACSAVGDLRKGKQLHSY 269
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ +L+ I+E SL+D+YVK G +E+ L +F + +++M+ ++
Sbjct: 270 LLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKS 329
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
IF ML G+ P+ Y +L C+H G + G + ++ + G ++D
Sbjct: 330 FDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDMYVSGVLID 388
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ + G L +A ++ I++ DVV W S+++ H
Sbjct: 389 MYSKYGWLDKAQRILDM--IEEKDVVSWTSMIAGYVQH 424
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 14/323 (4%)
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGMQI 153
GA FN + GF+ + E+ L L+ + + F +AC + +I
Sbjct: 5 GAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEI 64
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H G + N LI++Y K V A +F+++ + SW A+++ +A NGL
Sbjct: 65 HAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLG 124
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++L+ EM+ P +L S+LSACT LG+ H + + V +
Sbjct: 125 EEAVRLYREMHRSGV-VPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI +Y++C +F M +T++ +ISG A G G AL IF EM GL PD
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 334 DVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
V +L+ACS G + +G L M L+Y + G ++DL ++G + E
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIM------EGSLLDLYVKSGDIEE 297
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
AL++ S + N V+W +L A
Sbjct: 298 ALQIFDSGD-RTNVVLWNLMLVA 319
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 321/543 (59%), Gaps = 13/543 (2%)
Query: 75 LSHWGSM--DYACS--------IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
++ W SM Y C+ +F+++ + ++I G + EEAL L+ +M
Sbjct: 135 IAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMG 194
Query: 125 RGVE--PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
GVE P + T+ + ACA AL +G+QIH HVFK+G+ D ++ +LI Y C+++
Sbjct: 195 CGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQM 254
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E + +F +V W+A++ + N + LK+FGEM E P +S S L++
Sbjct: 255 EDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL-PNQSSFTSALNS 313
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C L ALD G+ H + ++ +V V SLI MY +CG L G+ +F+ ++ K +++
Sbjct: 314 CCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSW 373
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I G A HG G AL+ F++M+R +EPD++ + G+LSACSH+G+ +G F
Sbjct: 374 NSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 433
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ HY C+VD++GR+G L EA ELI++MP++ N +VW LLSA +H LE+ E
Sbjct: 434 NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAE 493
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
AAK + + H S YVLLSN+YA A RW DV++IR EM +G+ + PG S + +
Sbjct: 494 RAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWR 553
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
+F+S DRSHP+ D IY+ + + +LK GY PD L DV++++K L HS++LA
Sbjct: 554 NEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLA 613
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
I F LI +GS I + +NLR+C DCH+ KLI+ I R+IIVRD RFH F DG CSC
Sbjct: 614 IGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCG 673
Query: 603 DYW 605
DYW
Sbjct: 674 DYW 676
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 8/283 (2%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C N L + ++HAHV K G+ ++ + ++ L+ A + M+ + +F
Sbjct: 209 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA--NCKQMEDSLRVFHGKLH 266
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ L+ G+ + E+AL ++ EM GV P+ +F + +C L+AL G +I
Sbjct: 267 MNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREI 326
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K+G E D+FV NSLI MY +C + IFK++ +K++ SW+++I A +G
Sbjct: 327 HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCG 386
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNVIVET 272
L F +M P+E +LSAC+H G G+C N SA + +
Sbjct: 387 MWALAFFNQMVRSMV-EPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYA 445
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQ 314
++D+ + G LE+ L R M K + + V++S MH +
Sbjct: 446 CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 488
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A ++F ++ P + + +I G+ + F+ AL L+ EM + V N F
Sbjct: 27 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFD- 85
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA L ++ +F E + ++IN + + K+E A +F +M + +A+W
Sbjct: 86 CADLTMARK-------LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAW 138
Query: 201 SAIIAAHASNGLWSECLKLFGEM--NNEKCW----------------------------- 229
+++I + NG + L+LF EM N W
Sbjct: 139 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 198
Query: 230 -RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+P S V++AC + AL G H + + + + + +LI Y C +E L
Sbjct: 199 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 258
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F + ++ +++G ++ + ++AL +F EM+REG+ P+ + L++C
Sbjct: 259 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC 314
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/589 (38%), Positives = 339/589 (57%), Gaps = 33/589 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ VHAHV+K+G N A++LV A G+ A R+ D P +N LI G
Sbjct: 63 RAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTP--VVWNALISGHN 120
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA-LKEGMQIHGHVFKVGFECDL 166
+ F EA + +M G P T+ ++ AC K + GMQ+HG V G DL
Sbjct: 121 RCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDL 180
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--N 224
V+N+L++MY +C +E A +F M +SV SW+++++ G E LFG M
Sbjct: 181 RVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPER 240
Query: 225 NEKCW----------------------------RPEESILVSVLSACTHLGALDLGKCTH 256
+ W +E +VSV++AC LGAL++G+
Sbjct: 241 DTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVR 300
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ R ++ V +LIDMY KCG +E+ L +F+ M + + T++ +I GLA++G G+
Sbjct: 301 VYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGE 360
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+ +F M+ PD+V ++GVL+AC+HAGLV++G F M+ Y I P V HYGC+
Sbjct: 361 EAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCI 420
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
+DL GRAG + EAL+ I MP+ N +W +LL+A +VH N EIGE+ + L Q++ +
Sbjct: 421 IDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENS 480
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ Y LLSN+YA+ RW DV ++R + KG+ + PG SL+E+ +++FV+ D+SHP
Sbjct: 481 TVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSK 540
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
IY + + L GY PD+++V +V E+EK++ L HS+KLAIAFAL+ + I
Sbjct: 541 EIYCKLESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVI 600
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLRMC DCH KLIS +Y RE++VRDR RFH F+ G CSC+DYW
Sbjct: 601 RIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 6/250 (2%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
E+A+ Y M RG PD +TFP L KA A+ + +H HV K G + V SL
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
+ Y A A+ + ++ + W+A+I+ H + E F +M P
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGA-APT 143
Query: 233 ESILVSVLSACTH-LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
VSVLSAC G + LG HG ++ + ++ VE +L+DMY +C +E LF
Sbjct: 144 PVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLF 203
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M + ++++ ++SGL G+ EA +F M E D V + ++ A
Sbjct: 204 DGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRM----PERDTVSWTAMIDGYVQAARFR 259
Query: 352 EGLLCFDRMK 361
E L F M+
Sbjct: 260 EALEMFREMQ 269
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/564 (37%), Positives = 331/564 (58%), Gaps = 33/564 (5%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
L WG +D A + Q E + +LI G+ + +A++ +N M GV PD
Sbjct: 180 GLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVA 239
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK------------ 181
AC+KL+ L G +H V + + +LI+MY KC
Sbjct: 240 VIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVG 299
Query: 182 --------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
V+ A ++F QM + V +++++I + +G + L+LF
Sbjct: 300 RGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFM 359
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M R + +VS+L+AC LGAL G+ H S+ + I +V + T+L+DMY+KC
Sbjct: 360 QMRRHG-MRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKC 418
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +++ +F M ++ T++ MI+GLA +G GK+AL F +M R+G +P V Y+ VL
Sbjct: 419 GRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVL 478
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+ACSH+ L++EG L F+ M+ +++ P V+HYGC++DL+ R+G+L EA+ L+Q+MP+Q N
Sbjct: 479 TACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPN 538
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
V+W S+LSA +VH N+++ AA++L ++ + YV L N+Y +++W D ++R
Sbjct: 539 AVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRML 598
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ ++ G+S + VA +V+KFV+ D+SHP I M+ ++ +LK GYSP S++
Sbjct: 599 MEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRI 658
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
DVDE+EK + L HS+K+AIAF LI L PI I +NLR+C DCH+ KL+S ++ R
Sbjct: 659 AVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNR 718
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRDR RFH F+DG CSC D+W
Sbjct: 719 EIIVRDRSRFHHFRDGACSCNDFW 742
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 187/443 (42%), Gaps = 76/443 (17%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA--TCALSHWGSMDYACSIFRQIDEPGAF 97
T +++ + ++HA + G + A +L++ T +S + Y S+F ++ F
Sbjct: 8 TPRSVRQASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTF 67
Query: 98 DFNTLIRGFVK-EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM--QIH 154
F+T +R ++ + + L M GV FTF +F+ CA + G+ +H
Sbjct: 68 LFDTALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLH 127
Query: 155 GHVFKVGF-ECDLFVQNSLINMYGKC----------------EKVEFASAI--------- 188
+ V N LI+MY + V +A+ I
Sbjct: 128 AACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLL 187
Query: 189 ------FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
Q +++V SW+++IA ++ G ++ + F M ++ P+E ++ LSA
Sbjct: 188 DEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGV-APDEVAVIGALSA 246
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK---------------- 286
C+ L LDLG+ H + + + + +LIDMY KCG + +
Sbjct: 247 CSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEP 306
Query: 287 ------GLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
G C LF M + +T++ MI+G G+ ++AL +F +M R G+
Sbjct: 307 WNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGM 366
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRAGMLGEA 389
D+ V +L+AC+ G + G +E RIV + G ++D+ + G + EA
Sbjct: 367 RADNFTVVSLLTACASLGALPHGRAL--HASIEQRIVEEDVYLGTALLDMYMKCGRVDEA 424
Query: 390 LELIQSMPIQQNDV-VWRSLLSA 411
+ M + DV W ++++
Sbjct: 425 TAVFHRM--GERDVHTWTAMIAG 445
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
I A + +V ++I V+ G L++ L ++ ++++ +I+G + G+ +A+ F
Sbjct: 166 IPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCF 225
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHYGCVVDLMG 381
+ ML +G+ PD+V +G LSACS L N L + + + RI T ++D+
Sbjct: 226 NCMLSDGVAPDEVAVIGALSACSK--LKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYA 283
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI-AAKNLF-QINSHHPSDY 439
+ G + +A + ++ Q W +++ ++G + A++LF Q+ + +
Sbjct: 284 KCGDIAQAQAVFDAVGRGQKPEPWNAIIDG-----YCKLGHVDVARSLFDQMGARDVITF 338
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
+ Y + R D ++ +M G+ ++ F++V +
Sbjct: 339 NSMITGYIHSGRLRDALQLFMQMRRHGM-RADNFTVVSL 376
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/589 (36%), Positives = 328/589 (55%), Gaps = 22/589 (3%)
Query: 38 LKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATC-------------ALSHWGSM 81
LK+C L +HA ++ G F + F A+ L+ C S G +
Sbjct: 56 LKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 115
Query: 82 DYAC-----SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+ A +F ++ E A +NTLI G + +EAL + EM+ G PD FT
Sbjct: 116 ESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLST 175
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ A+ +K GM +HG+ K GF+ D+FV +SLI+MY C +++++ +F
Sbjct: 176 VLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 235
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
W++++A +A NG E L +F M RP S++ A +L L LGK H
Sbjct: 236 AVLWNSMLAGYAQNGSVEEALGIFRRMLQAGV-RPVPVTFSSLIPAFGNLSLLRLGKQLH 294
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
LIR N+ + +SLIDMY KCG ++ +F + ++++ MI G A+HG
Sbjct: 295 AYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTT 354
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA +F M ++P+ + ++ VL+ACSHAGLV+ G F+ M +Y VP+++H +
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 414
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
D +GRAG L EA I M I+ VW +LL A +VH N + E AK +F++
Sbjct: 415 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM 474
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+V+LSNMY+ + RW + A++R M KG+ + P S +EV K++ F++ D+SHP +D
Sbjct: 475 GSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYD 534
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
I + ++ Q+ +GY P++ VL+D++E++KRE L GHS+KLAI F +I G+ I
Sbjct: 535 RIIDALNVYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTI 594
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C DCH TK IS I REI+VRD RFHRFKDG CSC D+W
Sbjct: 595 RVMKNLRVCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 37/341 (10%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDN---FTFPALFKACAKLQALKEGMQIHGHVFK 159
IR + +F A+ L+ +M V P + + PA K+CA L +H +
Sbjct: 19 IRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIR 77
Query: 160 VGFECDLFVQNSLINM------------------YGKCEKVEFAS--AIFKQMDQKSVAS 199
G D F N+L+N+ G E + S +F +M ++ S
Sbjct: 78 SGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVS 137
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWR----PEESILVSVLSACTHLGALDLGKCT 255
W+ +I A + E L + EM WR P+ L +VL + G
Sbjct: 138 WNTLILGCAEHKRHQEALSMVREM-----WRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG I+N +V V +SLIDMY C ++ + +F +D + ++ M++G A +G
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 252
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EAL IF ML+ G+ P V + ++ A + L+ G + + R +
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYL-IRARFNDNIFISSS 311
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
++D+ + G + A + IQ D+V W +++ +H
Sbjct: 312 LIDMYCKCGNVDIARRVFNG--IQSPDIVSWTAMIMGYALH 350
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/565 (38%), Positives = 322/565 (56%), Gaps = 6/565 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+EE +++H+ + GF + LV+ A G +D A +IF I E ++ +I
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYA--KCGCLDEARAIFNGILERTVVSWSAMI 58
Query: 104 RGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG- 161
+ +EAL L++ M G VEP+ TF +F AC ++ L++G +IH G
Sbjct: 59 GAYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGE 118
Query: 162 -FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
+ ++N+L+NMY +C +E A +F MD SW+++I A N E L+LF
Sbjct: 119 LKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELF 178
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
MN E P L SVL+AC GAL +GK H L + +V+ +T+L+DMY K
Sbjct: 179 HRMNLEGI-PPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAK 237
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG LE +F M + ++++ MI+ LA HGQG EAL +F EM EG+ D ++ V
Sbjct: 238 CGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICV 297
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L ACSHAGL+ E L F M +Y I PT HY +D +GRAG L +A ELI SMP
Sbjct: 298 LRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHP 357
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
+ W++LL+A ++H E A+ L ++ Y LL N+YA R+ D ++R
Sbjct: 358 ETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRK 417
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M +GL + PG S +EV KV++FV+ DR+HP+ D I + ++ +++ GY P+
Sbjct: 418 GMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKD 477
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL V+E+EK + + HS+KLAIAF LI G+P+ I +NLR+C+DCH TK+I+ I
Sbjct: 478 VLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMR 537
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
R I+VRD RFH F+DG CSC+DYW
Sbjct: 538 RRIVVRDTHRFHHFEDGQCSCKDYW 562
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/562 (36%), Positives = 337/562 (59%), Gaps = 9/562 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
++E K+VH H+ G+ F + L+ + ++ A +F ++ E + T+I
Sbjct: 71 VQEGKRVHEHIFCKGYEPKMFVVNTLLNMYV--KFNLLEEAEDLFDEMPERNVVSWTTMI 128
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ ++ ++AL MF GV P+ FT+ ++ +AC L L+ Q+H + K G E
Sbjct: 129 SAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR---QLHCGIIKTGLE 184
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+FV+++LI++Y K ++ A +F +M + + W++II A N +E L LF M
Sbjct: 185 SDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRM 244
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ +++ L SVL ACT L L+LG+ H +++ L I+ +LIDMY KCG
Sbjct: 245 KRAG-FLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDL--ILNNALIDMYCKCGS 301
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
LE F M +K +++S M++GLA +G ++AL +F M G P+ + +GVL A
Sbjct: 302 LEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFA 361
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSHAGLV +G F MK + + P +HYGC++DL+GRAG L EA++LI M + + V
Sbjct: 362 CSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSV 421
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
WR+LL A +VH N+++ AAK + ++ Y+LLSN+YA QRW DVA++R M
Sbjct: 422 TWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMT 481
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
++G+ ++PG S +EV ++++ F+ D SHP + I + ++ + ++ GY PD + VL+
Sbjct: 482 NRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQ 541
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++ ++K + L+ HS+KLAI F L++LS+ +RI +NLR+C DCH + K++S + R I
Sbjct: 542 DLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSI 601
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
++RD R+H F+DG CSC DYW
Sbjct: 602 VIRDPIRYHHFQDGVCSCGDYW 623
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 153/307 (49%), Gaps = 11/307 (3%)
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
F + + A+ + M GV D T+ L K C+ A++EG ++H H+F G+E
Sbjct: 30 FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+FV N+L+NMY K +E A +F +M +++V SW+ +I+A+ SN L + LK M
Sbjct: 90 MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAY-SNKLNDKALKCLILMFR 148
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E RP SVL AC L L + H +I+ +V V ++LID+Y K L+
Sbjct: 149 EGV-RPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLD 204
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
L +F M + + ++ +I G A + G EAL++F M R G D VL AC+
Sbjct: 205 NALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264
Query: 346 HAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
L+ G + +K + ++ ++D+ + G L +A M ++++ +
Sbjct: 265 GLALLELGRQVHVHVLKFDQDLILN----NALIDMYCKCGSLEDANSAFSRM-VEKDVIS 319
Query: 405 WRSLLSA 411
W ++++
Sbjct: 320 WSTMVAG 326
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/493 (39%), Positives = 306/493 (62%), Gaps = 1/493 (0%)
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
E F+Y EM ++G+ D + + + ++ +L G Q+H + G + D + +L+
Sbjct: 7 EGFFMYQEMRKKGLRADPVSLSFVIRCYIRICSLIGGEQVHARILSDGHQSDSLLLTNLM 66
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF-GEMNNEKCWRPE 232
++Y C+K A +F +M Q+ +W+ +I+ + N + L +F G ++ E P+
Sbjct: 67 DLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPD 126
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+ + +L AC +LGAL+ G+ HG ++ + SLI MY + G L+K +F+
Sbjct: 127 DVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFK 186
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M +K +T+S +ISGLAM+G G+EA+ F EML+ G+ PDD+ + GVLSACS+ GLV++
Sbjct: 187 GMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSACSNCGLVDK 246
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G++ F RM E+ IVP + HYGC+VDL+GRAG L +A +LI SM ++ + +WR+LL A
Sbjct: 247 GMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDSTIWRTLLGAC 306
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
++H N+ +GE ++L ++ + DYVLL N+Y+ W V ++R M KG+ +P
Sbjct: 307 RIHRNVILGEHVVEHLIELKAQEAGDYVLLFNLYSSVDNWKKVTELRKFMKEKGIQTTPA 366
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S +E+ KV++FV D SHP D IYEM+ ++ QLK GY +I+ L ++D +EKR
Sbjct: 367 SSSIELKGKVHEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRY 426
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L HS+KLAIAF ++ G+ IRIA+NLR+C DCH + K++S +Y R++I+ D RFH
Sbjct: 427 VLSYHSEKLAIAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITDHTRFH 486
Query: 593 RFKDGTCSCRDYW 605
F+ G CSC DYW
Sbjct: 487 HFRGGHCSCNDYW 499
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 24 ELNLRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
EL + CL +L+ C NL E +KVH H+++ G+ ++L+A S +G+
Sbjct: 120 ELGCEPDDVTCLLLLQACANLGALEFGEKVHGHIVERGYDNATNLCNSLIAM--YSQFGN 177
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +F+ + ++ +I G EA+ + EM + GV PD+ TF + A
Sbjct: 178 LDKAFGVFKGMHNKNVVTWSAIISGLAMNGYGREAIGAFEEMLKMGVLPDDLTFTGVLSA 237
Query: 141 CAKLQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C+ + +GM I + K G ++ ++++ G+ ++ A + M K ++
Sbjct: 238 CSNCGLVDKGMIIFARMSKEFGIVPNIHHYGCMVDLLGRAGQLHQAYQLIMSMRVKPDST 297
Query: 200 -WSAIIAA 206
W ++ A
Sbjct: 298 IWRTLLGA 305
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/543 (39%), Positives = 321/543 (59%), Gaps = 13/543 (2%)
Query: 75 LSHWGSM--DYACS--------IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
++ W SM Y C+ +F+++ + ++I G + EEAL L+ +M
Sbjct: 119 IAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMG 178
Query: 125 RGVE--PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
GVE P + T+ + ACA AL +G+QIH HVFK+G+ D ++ +LI Y C+++
Sbjct: 179 CGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQM 238
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E + +F +V W+A++ + N + LK+FGEM E P +S S L++
Sbjct: 239 EDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVL-PNQSSFTSALNS 297
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C L ALD G+ H + ++ +V V SLI MY +CG L G+ +F+ ++ K +++
Sbjct: 298 CCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSW 357
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I G A HG G AL+ F++M+R +EPD++ + G+LSACSH+G+ +G F
Sbjct: 358 NSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSE 417
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ HY C+VD++GR+G L EA ELI++MP++ N +VW LLSA +H LE+ E
Sbjct: 418 NKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAE 477
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
AAK + + H S YVLLSN+YA A RW DV++IR EM +G+ + PG S + +
Sbjct: 478 RAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWR 537
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
+F+S DRSHP+ D IY+ + + +LK GY PD L DV++++K L HS++LA
Sbjct: 538 NEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLA 597
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
I F LI +GS I + +NLR+C DCH+ KLI+ I R+IIVRD RFH F DG CSC
Sbjct: 598 IGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRFHHFMDGRCSCG 657
Query: 603 DYW 605
DYW
Sbjct: 658 DYW 660
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 140/283 (49%), Gaps = 8/283 (2%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C N L + ++HAHV K G+ ++ + ++ L+ A + M+ + +F
Sbjct: 193 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYA--NCKQMEDSLRVFHGKLH 250
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ L+ G+ + E+AL ++ EM GV P+ +F + +C L+AL G +I
Sbjct: 251 MNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREI 310
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K+G E D+FV NSLI MY +C + IFK++ +K++ SW+++I A +G
Sbjct: 311 HTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCG 370
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNVIVET 272
L F +M P+E +LSAC+H G G+C N SA + +
Sbjct: 371 MWALAFFNQMVRSMV-EPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYA 429
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQ 314
++D+ + G LE+ L R M K + + V++S MH +
Sbjct: 430 CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSK 472
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 40/296 (13%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A ++F ++ P + + +I G+ + F+ AL L+ EM + V N F
Sbjct: 11 IDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGCFD- 69
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA L ++ +F E + ++IN + + K+E A +F +M + +A+W
Sbjct: 70 CADLTMARK-------LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAW 122
Query: 201 SAIIAAHASNGLWSECLKLFGEM--NNEKCW----------------------------- 229
+++I + NG + L+LF EM N W
Sbjct: 123 NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVE 182
Query: 230 -RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+P S V++AC + AL G H + + + + + +LI Y C +E L
Sbjct: 183 VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSL 242
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F + ++ +++G ++ + ++AL +F EM+REG+ P+ + L++C
Sbjct: 243 RVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC 298
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 338/558 (60%), Gaps = 5/558 (0%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++HA+ +K G + ++LV A + SM Y IF ++ + + T+I G +
Sbjct: 404 QIHAYAMKNGLDSDLQVGNSLVDMYA--KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQ 461
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
AL L+ E+ G++ D ++ AC+ L+ + +IH ++ + G DL +
Sbjct: 462 NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVL 520
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
QN ++++YG+C V++A+ +F+ ++ K V SW+++I+ + NGL +E L+LF M E
Sbjct: 521 QNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK-ETG 579
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ LVS+LSA L AL GK HG LIR L + ++L+DMY +CG LEK
Sbjct: 580 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 639
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F + +K + ++ MI+ MHG G+ A+ +F M E + PD + +V VL ACSH+G
Sbjct: 640 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 699
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L+NEG + MK EY++ P +HY C+VDL+GRA L EA + ++ M ++ VW +L
Sbjct: 700 LMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 759
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A ++H N E+GEIAA+ L +++ +P +YVL+SN+Y+ +RW DV +R M + GL
Sbjct: 760 LGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLK 819
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDE 527
++PG S +EV KV+ F+++D+SHP IY + Q+ +L E GY VL + E
Sbjct: 820 KNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKE 879
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK + L GHS++LAIA+ ++ +G+ +RI +NLR+C DCH + KLIS +ERE+++RD
Sbjct: 880 EEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRD 939
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH FK G CSC D W
Sbjct: 940 ANRFHHFKGGVCSCGDVW 957
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 197/387 (50%), Gaps = 21/387 (5%)
Query: 38 LKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L+ C++ K+ +HA VLK ++ N F A+ L+A A +G M A +IF +D+
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA--RFGKMGEAANIFYNMDDW 346
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N+++ GFV+ + EAL Y+EM + G +PD ++ A A+ GMQIH
Sbjct: 347 DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIH 406
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ K G + DL V NSL++MY K +++ IF +M K V SW+ IIA HA NG S
Sbjct: 407 AYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHS 466
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
L+LF E+ E + ++ S+L AC+ L + K H +IR +++++ +
Sbjct: 467 RALELFREVQLEGI-DLDVMMISSILLACSGLKLISSVKEIHSYIIRK-GLSDLVLQNGI 524
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+D+Y +CG ++ +F ++ K ++++ MIS +G EAL +F M G+EPD
Sbjct: 525 VDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDS 584
Query: 335 VVYVGV-----LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ V + + G G L LE + T +VD+ R G L ++
Sbjct: 585 ISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST------LVDMYARCGTLEKS 638
Query: 390 LELIQSMPIQQND-VVWRSLLSASKVH 415
+ I+ D V+W S+++A +H
Sbjct: 639 RNVFNF--IRNKDLVLWTSMINAYGMH 663
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 8/324 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYACSIFRQI 91
++L+ C K L E ++VHAH++ +N F ++ LV G + A +F +
Sbjct: 83 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFM--YGKCGCLVDAEKLFDGM 140
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
F +N +I +V E +L LY EM G+ D TFP + KAC L+ + G
Sbjct: 141 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGA 200
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWSAIIAAHASN 210
++HG K G+ +FV NS++ MY KC + A +F +M +K V SW+++I+A++SN
Sbjct: 201 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G E L+LFGEM + P V+ L AC + G H +++++ +NV V
Sbjct: 261 GQSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LI MY + G + + +F M D ++++ M+SG +G EAL + EM G
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379
Query: 331 EPDDVVYVGVLSACSHAGLVNEGL 354
+PD V + +++A + +G G+
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGM 403
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 205/412 (49%), Gaps = 13/412 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF-RQID 92
ILK C L++ + +VH +K G+ F A+++V + ++ A +F R +
Sbjct: 186 ILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGM--YTKCNDLNGARQLFDRMPE 243
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +N++I + + EAL L+ EM + + P+ +TF A +AC +K+GM
Sbjct: 244 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 303
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH V K + ++FV N+LI MY + K+ A+ IF MD SW+++++ NGL
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 363
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ E L+ + EM + +P+ ++S+++A G G H ++N ++ V
Sbjct: 364 YHEALQFYHEMRDAG-QKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGN 422
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+DMY K ++ C+F M DK ++++ +I+G A +G AL +F E+ EG++
Sbjct: 423 SLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL 482
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D ++ +L ACS L++ + + + V G +VD+ G G + A +
Sbjct: 483 DVMMISSILLACSGLKLISS-VKEIHSYIIRKGLSDLVLQNG-IVDVYGECGNVDYAARM 540
Query: 393 IQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
+ I+ DVV W S++S VH+ L + +L + P L+S
Sbjct: 541 FE--LIEFKDVVSWTSMISC-YVHNGLANEALELFHLMKETGVEPDSISLVS 589
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 22/321 (6%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFT----FPALFKACAKLQALKEGMQIHGHVF 158
+R K EA ++F P F+ + ++ + C +AL EG Q+H H+
Sbjct: 47 LREICKRGSVNEAFQSLTDLFANQ-SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMI 105
Query: 159 KV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+F+ L+ MYGKC + A +F M K++ +W+A+I A+ +NG L
Sbjct: 106 TSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSL 165
Query: 218 KLFGEMNN-----EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+L+ EM + C P +L AC L G HG I+ V V
Sbjct: 166 ELYREMRVSGIPLDACTFP------CILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVAN 219
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
S++ MY KC L LF M +K ++++ MIS + +GQ EAL +F EM + L
Sbjct: 220 SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLA 279
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+ +V L AC + + +G+ +K Y I V + ++ + R G +GEA
Sbjct: 280 PNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAA 337
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
+ +M + + W S+LS
Sbjct: 338 NIFYNMD-DWDTISWNSMLSG 357
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/474 (43%), Positives = 304/474 (64%), Gaps = 10/474 (2%)
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK--CEKVEFASAIFKQMDQK 195
F A A++ +H + K+GFE + V N++++ Y K +E A +F M ++
Sbjct: 205 FSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ER 263
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNE----KCWRPEESILVSVLSACTHLGALDL 251
V SW+++IA +A NG+ +E + L+ +M N KC L +VL AC H GA+
Sbjct: 264 DVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKC---NAVALSAVLLACAHAGAIQT 320
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK H ++R NV V TS++DMY KCG +E FR + +K L++S MI+G M
Sbjct: 321 GKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGM 380
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
HG+G+EAL IF+EM R GL P+ + ++ VL+ACSHAGL++EG ++ MK E+ I V+
Sbjct: 381 HGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVE 440
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
HYGC+VDL+GRAG L EA LI+ M ++ + +W +LLSA ++H N+E+ E++ K LF++
Sbjct: 441 HYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFEL 500
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
++ + YVLLSN+YA A+ W DV +IR + ++ + + PG+S E+ K+Y F D+S
Sbjct: 501 DASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKS 560
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
HP IY + ++ +++ GY P+ VL D+DE+EK L+ HS+KLA+AFAL++
Sbjct: 561 HPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHDLDEEEKESALRIHSEKLAVAFALMNSV 620
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S I I +NLR+C+DCHT K I+ I EREII+RD +RFH FKDG CSCRDYW
Sbjct: 621 PRSVIHIIKNLRVCSDCHTAMKFITKITEREIIIRDLQRFHHFKDGLCSCRDYW 674
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 134/252 (53%), Gaps = 7/252 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+HA + K GF N + ++ + A ++ A +F + E +N++I + +
Sbjct: 220 LHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-ERDVVSWNSMIALYAQN 278
Query: 110 VEFEEALFLYNEMFE--RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
EA+ LY++M G++ + A+ ACA A++ G +IH V ++G E +++
Sbjct: 279 GMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVY 338
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V S+++MY KC +VE AS F+++ +K++ SWSA+I + +G E L++F EM
Sbjct: 339 VGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSG 398
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLE 285
RP +SVL+AC+H G LD G+ + ++ + + VE ++D+ + GCL+
Sbjct: 399 L-RPNYITFISVLAACSHAGLLDEGRYWYNAMKQEF-GIEAGVEHYGCMVDLLGRAGCLD 456
Query: 286 KGLCLFRMMADK 297
+ L + M K
Sbjct: 457 EAYSLIKEMKVK 468
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/558 (38%), Positives = 339/558 (60%), Gaps = 5/558 (0%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++HA+ +K G + ++LV A + SM Y IF ++ + + T+I G +
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYA--KFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQ 497
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
AL L+ E+ G++ D ++ AC+ L+ + +IH ++ + G DL +
Sbjct: 498 NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVL 556
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
QN ++++YG+C V++A+ +F+ ++ K V SW+++I+ + NGL +E L+LF M E
Sbjct: 557 QNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMK-ETG 615
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ LVS+LSA L AL GK HG LIR L + ++L+DMY +CG LEK
Sbjct: 616 VEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSR 675
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F + +K + ++ MI+ MHG G+ A+ +F M E + PD + +V VL ACSH+G
Sbjct: 676 NVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSG 735
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L+NEG + MK EY++ P +HY C+VDL+GRA L EA + ++ M ++ VW +L
Sbjct: 736 LMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCAL 795
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A ++H N E+GEIAA+ L +++ +P +YVL+SN+YA +RW DV ++R M + GL
Sbjct: 796 LGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLK 855
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDE 527
++PG S +EV KV+ F+++D+SHP IY + Q+ +L E GY VL + E
Sbjct: 856 KNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKE 915
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK + L GHS++LAIA+ ++ +G+ +RI +NLR+C DCH + KLIS +ERE+++RD
Sbjct: 916 EEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRD 975
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH FK G CSC D W
Sbjct: 976 ANRFHHFKGGVCSCGDVW 993
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 198/390 (50%), Gaps = 21/390 (5%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ L+ C++ K+ +HA VLK ++ N F A+ L+A A +G M A +IF +
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYA--RFGKMGEAANIFYNM 379
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D+ +N+++ GFV+ + EAL Y+EM + G +PD ++ A A+ GM
Sbjct: 380 DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGM 439
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH + K G + DL V NSL++MY K +++ IF +M K V SW+ IIA HA NG
Sbjct: 440 QIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNG 499
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
S L+LF E+ E + ++ S+L AC+ L + K H +IR +++++
Sbjct: 500 SHSRALELFREVQLEGI-DLDVMMISSILLACSGLKLISSVKEIHSYIIRK-GLSDLVLQ 557
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++D+Y +CG ++ +F ++ K ++++ MIS +G EAL +F M G+E
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVE 617
Query: 332 PDDVVYVGV-----LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
PD + V + + G G L LE + T +VD+ R G L
Sbjct: 618 PDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST------LVDMYARCGTL 671
Query: 387 GEALELIQSMPIQQND-VVWRSLLSASKVH 415
++ + I+ D V+W S+++A +H
Sbjct: 672 EKSRNVFNF--IRNKDLVLWTSMINAYGMH 699
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 168/324 (51%), Gaps = 8/324 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYACSIFRQI 91
++L+ C K L E ++VHAH++ +N F ++ LV G + A +F +
Sbjct: 119 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFM--YGKCGCLVDAEKLFDGM 176
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
F +N +I +V E +L LY EM G+ D TFP + KAC L+ + G
Sbjct: 177 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGA 236
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWSAIIAAHASN 210
++HG K G+ +FV NS++ MY KC + A +F +M +K V SW+++I+A++SN
Sbjct: 237 EVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G E L+LFGEM + P V+ L AC + G H +++++ +NV V
Sbjct: 297 GQSIEALRLFGEM-QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LI MY + G + + +F M D ++++ M+SG +G EAL + EM G
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415
Query: 331 EPDDVVYVGVLSACSHAGLVNEGL 354
+PD V + +++A + +G G+
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGM 439
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 205/412 (49%), Gaps = 13/412 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF-RQID 92
ILK C L++ + +VH +K G+ F A+++V + ++ A +F R +
Sbjct: 222 ILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGM--YTKCNDLNGARQLFDRMPE 279
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +N++I + + EAL L+ EM + + P+ +TF A +AC +K+GM
Sbjct: 280 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 339
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH V K + ++FV N+LI MY + K+ A+ IF MD SW+++++ NGL
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGL 399
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ E L+ + EM + +P+ ++S+++A G G H ++N ++ V
Sbjct: 400 YHEALQFYHEMRDAG-QKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGN 458
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+DMY K ++ C+F M DK ++++ +I+G A +G AL +F E+ EG++
Sbjct: 459 SLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL 518
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D ++ +L ACS L++ + + + V G +VD+ G G + A +
Sbjct: 519 DVMMISSILLACSGLKLISS-VKEIHSYIIRKGLSDLVLQNG-IVDVYGECGNVDYAARM 576
Query: 393 IQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
+ I+ DVV W S++S VH+ L + +L + P L+S
Sbjct: 577 FE--LIEFKDVVSWTSMISC-YVHNGLANEALELFHLMKETGVEPDSISLVS 625
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 22/321 (6%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFT----FPALFKACAKLQALKEGMQIHGHVF 158
+R K EA ++F P F+ + ++ + C +AL EG Q+H H+
Sbjct: 83 LREICKRGSVNEAFQSLTDLFANQ-SPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMI 141
Query: 159 KV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+F+ L+ MYGKC + A +F M K++ +W+A+I A+ +NG L
Sbjct: 142 TSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSL 201
Query: 218 KLFGEMNN-----EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+L+ EM + C P +L AC L G HG I+ V V
Sbjct: 202 ELYREMRVSGIPLDACTFP------CILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVAN 255
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
S++ MY KC L LF M +K ++++ MIS + +GQ EAL +F EM + L
Sbjct: 256 SIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLA 315
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+ +V L AC + + +G+ +K Y I V + ++ + R G +GEA
Sbjct: 316 PNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVAN--ALIAMYARFGKMGEAA 373
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
+ +M + + W S+LS
Sbjct: 374 NIFYNMD-DWDTISWNSMLSG 393
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 333/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C K +H+ V+K GF + ++L++ + S G ++ A +F +I E
Sbjct: 117 VLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS--GRLNDAHKVFEEIPE 174
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ L G+ + EA+ L+ +M E GV PD++ + AC + L G I
Sbjct: 175 RSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H+ ++ + + FV+ +L+N+Y KC K+E A ++F M +K + +WS +I +ASN
Sbjct: 235 VKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFP 294
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++ F +M E +P++ +V LS+C LGALDLG+ + R+ N+ + +
Sbjct: 295 KEGIEFFLQMLQENL-KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + +G +F+ M +K + + ISGLA +G K + ++F + + G+ PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++G+L C HAGL+ +GL F+ + Y + TV+HYGC+VDL GRAGML +A LI
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MP++ N +VW +LLS ++ + ++ E K L + + +YV LSN+Y+ + RW
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWD 533
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ A++R M KG+ + PG+S +E+ V++F++ D+SHP D IY + + +++ G
Sbjct: 534 EAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P V DV+++EK L HS+KLA+AF LI G IR+ +NLR+C DCH K
Sbjct: 594 FVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMK 653
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I REI+VRD RFH F +G+CSC DYW
Sbjct: 654 LISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 188/378 (49%), Gaps = 12/378 (3%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K Q+ T++ K+VH ++ + F + L+ + Y+ +F
Sbjct: 12 KVQQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLF--FRQTHYSFLLFS 69
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
P F +NTLI GFV F E L L+ + + G+ FTFP + KAC + K
Sbjct: 70 HTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKL 129
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G+ +H V K GF D+ SL+++Y ++ A +F+++ ++SV +W+A+ + + +
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTT 189
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G E + LF +M E RP+ +V VLSAC H+G LD G+ + N
Sbjct: 190 AGKHREAIDLFKKM-VEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSF 248
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+L+++Y KCG +EK +F M +K +T+S MI G A + KE + F +ML+E
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQEN 308
Query: 330 LEPDDVVYVGVLSACSHAGLVNE---GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
L+PD VG LS+C+ G ++ G+ DR + + + ++D+ + G +
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDR----HEFLTNLFMANALIDMYAKCGAM 364
Query: 387 GEALELIQSMPIQQNDVV 404
E+ + M ++ D+V
Sbjct: 365 ARGFEVFKEM--KEKDIV 380
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 343/582 (58%), Gaps = 19/582 (3%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+K C +L + K+ H +G+ + F +S L+ +TC G ++ A +F +I
Sbjct: 83 IKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC-----GKLEDARKVFDEI 137
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF------PALFKACAKLQ 145
+ + ++IRG+ +A+ L+ ++ + D F ++ AC+++
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVA 197
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK--VEFASAIFKQMDQKSVASWSAI 203
A IH V K GF+ + V N+L++ Y K + V A IF Q+ K S+++I
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
++ +A +G+ +E +F + EK L +VL A +H GAL +GKC H +IR
Sbjct: 258 MSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+VIV TS+IDMY KCG +E F M +K +++ MI+G MHG +AL +F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M+ G+ P+ + +V VL+ACSHAGL + G F+ MK + + P ++HYGC+VDL+GRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L +A +LIQ M ++ + ++W SLL+A ++H N+E+ EI+ LF+++ + Y+LLS
Sbjct: 438 GFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLS 497
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
++YA + RW DV ++R M ++GL + PGFSL+E+ +V+ F+ D HP + IYE +
Sbjct: 498 HIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +L GY + S V DVDE+EK L+ HS+KLAIAF +++ GS + + +NLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C+DCH KLIS I +RE +VRD KRFH FKDG CSC DYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 55/371 (14%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R +D+ F +N++I + + EAL ++ M + + P +FP KAC+ L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIF 93
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q H F G++ D+FV ++LI MY C K+E A +F ++ ++++ SW+++I +
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 209 SNGLWSECLKLFGEM----NNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNI 263
NG + + LF ++ N++ +S+ +VSV+SAC+ + A L + H +I+
Sbjct: 154 LNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG 213
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLC----LFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
V V +L+D Y K G E G+ +F + DK +++Y+ ++S A G EA
Sbjct: 214 FDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 320 SIFSEMLRE------------------------------------GLEPDDVVYVGVLSA 343
+F +++E GLE D +V ++
Sbjct: 272 DVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM---PIQQ 400
G V L FDRMK + V+ + ++ G G +ALEL +M ++
Sbjct: 332 YCKCGRVETARLAFDRMKNK-----NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 401 NDVVWRSLLSA 411
N + + S+L+A
Sbjct: 387 NYITFVSVLAA 397
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
E+ + + +D+ V SW+++IA A +G +E L+ F M + P S
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLY-PTRSSFPCA 82
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
+ AC+ L + GK TH ++ V ++LI MY CG LE +F + +
Sbjct: 83 IKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY------VGVLSACS 345
++++ MI G ++G +A+S+F ++L E + D ++ V V+SACS
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACS 194
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/565 (39%), Positives = 320/565 (56%), Gaps = 12/565 (2%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSIFRQIDEPGAFDFN 100
E K+VH H ++ G S+L A H GS+D A IF ++ +N
Sbjct: 352 EWVKEVHKHAVEVGL------VSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWN 405
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+I G ++ EAL L+ +M G PD TF + A +AL+ ++H +
Sbjct: 406 AMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDA 465
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G DL V N+L++MY KC +A +F M +++V +W+ +I+ A +G E LF
Sbjct: 466 GL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLF 524
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+M E P+ + VS+LSAC GAL+ K H + ++ V +L+ MY K
Sbjct: 525 LQMLREGI-VPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAK 583
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG ++ +F M ++ +++VMI GLA HG+G +AL +F +M EG +P+ +V V
Sbjct: 584 CGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAV 643
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
LSACSHAGLV+EG F + +Y I PT++HY C+VDL+GRAG L EA I +MPI+
Sbjct: 644 LSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEP 703
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
D W +LL A + NLE+ E AAK ++ S YVLLSN+YA W +R+
Sbjct: 704 GDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRS 763
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M +G+ + PG S +EV +++ FV D SHP IY + + +LK EGY PD
Sbjct: 764 MMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRL 823
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VLR+ D++ K + L HS+KLAI + L+H +PIR+ +NLR+C+DCHT TK IS +
Sbjct: 824 VLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTG 883
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REI+ RD KRFH FKDG CSC DYW
Sbjct: 884 REIVARDAKRFHHFKDGVCSCGDYW 908
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 168/341 (49%), Gaps = 13/341 (3%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L Q E P L L I T LE K+VH H K GF S+L
Sbjct: 219 LFLQMERGGCLPNLTTYLSILNASAITSTGA-LEWVKEVHKHAGKAGFI------SDLRV 271
Query: 72 TCALSHW----GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
AL H GS+D A +F + + +N +I G + EA ++ +M + G
Sbjct: 272 GNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGF 331
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
PD+ T+ +L A + ++H H +VG DL V ++ ++MY +C ++ A
Sbjct: 332 VPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQL 391
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF ++ ++V +W+A+I A E L LF +M E + P+ + V++LSA
Sbjct: 392 IFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFF-PDATTFVNILSANVGEE 450
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
AL+ K H I + +++ V +L+ MY KCG +F M ++ T++VMIS
Sbjct: 451 ALEWVKEVHSYAI-DAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMIS 509
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
GLA HG G EA S+F +MLREG+ PD YV +LSAC+ G
Sbjct: 510 GLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTG 550
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 139/244 (56%), Gaps = 1/244 (0%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I G+ + E+A+ +Y++M G +P+ T+ ++ KAC +LK G +IH H+ + G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F+ D+ V+ +L+NMY KC ++ A IF +M +++V SW+ +I A G E F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M E + P VS+L+A GAL+ K H + AL++ V +L+ MY K
Sbjct: 121 QMQREG-FIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +F M ++ +++VMI GLA HG+G+EA S+F +M R G P+ Y+ +L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 342 SACS 345
+A +
Sbjct: 240 NASA 243
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 187/385 (48%), Gaps = 16/385 (4%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIF 88
L+ILK C +L+ KK+HAH+++ GF + + N+ C GS+D A IF
Sbjct: 34 LSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKC-----GSIDDAQLIF 88
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
++ E + +I G +EA + +M G P+++T+ ++ A A AL+
Sbjct: 89 DKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALE 148
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
++H H G DL V N+L++MY K ++ A +F M ++ + SW+ +I A
Sbjct: 149 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLA 208
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVL--SACTHLGALDLGKCTHGSLIRNISAL 266
+G E LF +M C P + +S+L SA T GAL+ K H +
Sbjct: 209 QHGRGQEAFSLFLQMERGGCL-PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ V +LI MY KCG ++ +F M D+ ++++ MI GLA +G G EA +IF +M
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQ 327
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+EG PD Y+ +L+ G E + + +E +V ++ V + R G +
Sbjct: 328 QEGFVPDSTTYLSLLNTHVSTG-AWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSI 386
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
+A + + + +N W +++
Sbjct: 387 DDAQLIFDKLAV-RNVTTWNAMIGG 410
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I +A G + +K++ +M E +P E +S+L AC +L GK H +I++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGG-QPNEITYLSILKACCSPVSLKWGKKIHAHIIQS 59
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+V VET+L++MYVKCG ++ +F M ++ ++++VMI GLA +G+G+EA F
Sbjct: 60 GFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRF 119
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAG 348
+M REG P+ YV +L+A + AG
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAG 145
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 344/582 (59%), Gaps = 6/582 (1%)
Query: 27 LRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+ + E L +L C L + +H + L+ F + + +A A + GS+ +
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIA--AYAKCGSLVF 469
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ +N +I G + + +AL Y EM G+ PD+F+ +L AC +
Sbjct: 470 AEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGR 529
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L+ G +IHG V + G E + FV SL+++Y C K + F++M K+ W+A+
Sbjct: 530 LGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAM 589
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
++ ++ N L +E L LF +M ++ P+E + S+L AC+ L AL LGK H ++N
Sbjct: 590 LSGYSQNELPNEALSLFRQMLSDGL-EPDEIAIASILGACSQLSALGLGKEVHCFALKNS 648
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+ V SL+DMY K G L +F + K +++VMI+G +HGQG +A+ +F
Sbjct: 649 LMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFE 708
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M R +PD ++GVL AC HAGLV+EGL +M+ Y++ P ++HY CV+D++GRA
Sbjct: 709 DMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRA 768
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EAL I MP + + +W SLLS+S + +LE+GE A+ L + ++ Y+LLS
Sbjct: 769 GRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A +W V +R +M L + G S +E+ KVY F++ + S+P+ D I +M +
Sbjct: 829 NLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWN 888
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E Q+ GY+PD S VL +++E EKR+ LKGHS+K+AI F ++ +G+ +RI++NLR
Sbjct: 889 RLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLR 948
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH K IS +REI++RD KRFH FK G CSC DYW
Sbjct: 949 ICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 184/388 (47%), Gaps = 14/388 (3%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L C N++ +H +K G + L+ S G + A +FR+I
Sbjct: 317 VTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDM--YSKCGCLSEAAILFRKI 374
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKE 149
+ +N++I + +E E L +M+ E +E + T L AC + L
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
+HG+ + F+ + N+ I Y KC + FA +F M+ KSV+SW+A+I HA
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQ 494
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG + L + EM P++ +VS+L AC LG L GK HG ++RN +N
Sbjct: 495 NGDPIKALDFYFEMTRLGIL-PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V SL+ +Y C G F M DK + ++ M+SG + + EALS+F +ML +G
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG 613
Query: 330 LEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
LEPD++ +L ACS + G + CF L+ ++ ++D+ ++G LG
Sbjct: 614 LEPDEIAIASILGACSQLSALGLGKEVHCF---ALKNSLMEDNFVACSLMDMYAKSGFLG 670
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + + ++ W +++ VH
Sbjct: 671 HSQRIFNRLNGKE-VASWNVMITGFGVH 697
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 143/262 (54%), Gaps = 4/262 (1%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQ 145
+F ++ F +N L+ G+V+ ++EA+ + E+ +PDNFTFP L KAC
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+ G +HG K+G DLFV N++I +YGKC ++ A +F +M ++++ SW+++I
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
Query: 206 AHASNGLWSECLKLFGE-MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ NG W E + F + + P+ + +V++L C+ G +D+G HG ++
Sbjct: 285 GFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGL 344
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
++V +LIDMY KCGCL + LFR + +K ++++ MI + G E + +
Sbjct: 345 VHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRK 404
Query: 325 MLREG--LEPDDVVYVGVLSAC 344
M E +E ++V + +L AC
Sbjct: 405 MWMEEELMEVNEVTILNLLPAC 426
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K VH +K G + F + ++A G +D A +F ++ E +N+LIRGF
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIAL--YGKCGFLDEAVELFDKMPEQNLISWNSLIRGFS 287
Query: 108 KEVEFEEALFLYNEMFER--GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ + EA + + E G+ PD T L C+ + GM IHG K+G +
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-N 224
L V N+LI+MY KC + A+ +F++++ KSV SW+++I A++ G E L +M
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E+ E ++++L AC L + HG +R+ ++ + I Y KCG L
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F M K +++ +I G A +G +AL + EM R G+ PDD V +L AC
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527
Query: 345 SHAGLVNEG 353
GL+ G
Sbjct: 528 GRLGLLQYG 536
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 127/252 (50%), Gaps = 4/252 (1%)
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F D + LI MY C + +F ++ K++ W+A+++ + N L+ E + F
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFL 198
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
E+ + ++P+ ++ ACT + LGK HG ++ +++ V ++I +Y KC
Sbjct: 199 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR--EGLEPDDVVYVG 339
G L++ + LF M ++ ++++ +I G + +G EA F +L +GL PD V
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L CS G V+ G++ M ++ +V + ++D+ + G L EA L + +
Sbjct: 319 LLPVCSGEGNVDVGMV-IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIE-N 376
Query: 400 QNDVVWRSLLSA 411
++ V W S++ A
Sbjct: 377 KSVVSWNSMIGA 388
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 343/582 (58%), Gaps = 6/582 (1%)
Query: 27 LRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+ + E L +L C L + +H + L+ F + + +A A + GS+ +
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIA--AYAKCGSLVF 469
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ +N +I G + + +AL Y EM G+ PD+F+ +L AC +
Sbjct: 470 AEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGR 529
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L+ G +IHG V + G E + FV SL+++Y C K + F+ M K+ W+A+
Sbjct: 530 LGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAM 589
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
++ ++ N L +E L LF +M ++ P+E + S+L AC+ L AL LGK H ++N
Sbjct: 590 LSGYSQNELPNEALSLFRQMLSDGL-EPDEIAIASILGACSQLSALGLGKEVHCFALKNS 648
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+ V SL+DMY K G L +F + K +++VMI+G +HGQG +A+ +F
Sbjct: 649 LMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFE 708
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M R +PD ++GVL AC HAGLV+EGL +M+ Y++ P ++HY CV+D++GRA
Sbjct: 709 DMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRA 768
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EAL I MP + + +W SLLS+S + +LE+GE A+ L + ++ Y+LLS
Sbjct: 769 GRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A +W V +R +M L + G S +E+ KVY F++ + S+P+ D I +M +
Sbjct: 829 NLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWN 888
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E Q+ GY+PD S VL +++E EKR+ LKGHS+K+AI F ++ +G+ +RI++NLR
Sbjct: 889 RLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLR 948
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH K IS +REI++RD KRFH FK G CSC DYW
Sbjct: 949 ICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 184/388 (47%), Gaps = 14/388 (3%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L C N++ +H +K G + L+ S G + A +FR+I
Sbjct: 317 VTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDM--YSKCGCLSEAAILFRKI 374
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKE 149
+ +N++I + +E E L +M+ E +E + T L AC + L
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
+HG+ + F+ + N+ I Y KC + FA +F M+ KSV+SW+A+I HA
Sbjct: 435 LRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQ 494
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG + L + EM P++ +VS+L AC LG L GK HG ++RN +N
Sbjct: 495 NGDPIKALDFYFEMTRLGIL-PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V SL+ +Y C G F M DK + ++ M+SG + + EALS+F +ML +G
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG 613
Query: 330 LEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
LEPD++ +L ACS + G + CF L+ ++ ++D+ ++G LG
Sbjct: 614 LEPDEIAIASILGACSQLSALGLGKEVHCF---ALKNSLMEDNFVACSLMDMYAKSGFLG 670
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + + ++ W +++ VH
Sbjct: 671 HSQRIFNRLNGKE-VASWNVMITGFGVH 697
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 143/262 (54%), Gaps = 4/262 (1%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQ 145
+F ++ F +N L+ G+V+ ++EA+ + E+ +PDNFTFP L KAC
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+ G +HG K+G DLFV N++I +YGKC ++ A +F +M ++++ SW+++I
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
Query: 206 AHASNGLWSECLKLFGE-MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ NG W E + F + + P+ + +V++L C+ G +D+G HG ++
Sbjct: 285 GFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGL 344
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
++V +LIDMY KCGCL + LFR + +K ++++ MI + G E + +
Sbjct: 345 VHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRK 404
Query: 325 MLREG--LEPDDVVYVGVLSAC 344
M E +E ++V + +L AC
Sbjct: 405 MWMEEELMEVNEVTILNLLPAC 426
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 151/309 (48%), Gaps = 5/309 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K VH +K G + F + ++A G +D A +F ++ E +N+LIRGF
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIAL--YGKCGFLDEAVELFDKMPEQNLISWNSLIRGFS 287
Query: 108 KEVEFEEALFLYNEMFER--GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ + EA + + E G+ PD T L C+ + GM IHG K+G +
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-N 224
L V N+LI+MY KC + A+ +F++++ KSV SW+++I A++ G E L +M
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E+ E ++++L AC L + HG +R+ ++ + I Y KCG L
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F M K +++ +I G A +G +AL + EM R G+ PDD V +L AC
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527
Query: 345 SHAGLVNEG 353
GL+ G
Sbjct: 528 GRLGLLQYG 536
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 127/252 (50%), Gaps = 4/252 (1%)
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F D + LI MY C + +F ++ K++ W+A+++ + N L+ E + F
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFL 198
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
E+ + ++P+ ++ ACT + LGK HG ++ +++ V ++I +Y KC
Sbjct: 199 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR--EGLEPDDVVYVG 339
G L++ + LF M ++ ++++ +I G + +G EA F +L +GL PD V
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L CS G V+ G++ M ++ +V + ++D+ + G L EA L + +
Sbjct: 319 LLPVCSGEGNVDVGMV-IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIE-N 376
Query: 400 QNDVVWRSLLSA 411
++ V W S++ A
Sbjct: 377 KSVVSWNSMIGA 388
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 314/527 (59%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +FR + E + + +I+G + +EA+ + EM +G++ D + F ++
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L A+ EG QIH + + F+ ++V ++LI+MY KC+ + +A +F +M QK+V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++ + G E +K+F +M P+ L +SAC ++ +L+ G HG
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGI-DPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I + V V SL+ +Y KCG ++ LF M + ++++ M+S A G+ E
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +M++ GL+PD V GV+SACS AGLV +G F M EY IVP++ HY C++D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L R+G L EA+ I MP + + W +LLSA + NLEIG+ AA++L +++ HHP+
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y LLS++YA +W VA++R M K + + PG S ++ K++ F + D S P D I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++ GY PD S V DV+E K + L HS++LAIAF LI + G PIR+
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TK IS + REI+VRD RFHRFKDGTCSC D+W
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI---- 103
K +H ++++ + F +N+V AL S YA +F +I +P F +N L+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMK--SSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 104 -RGFVKEVE--FEE------------------------ALFLYNEMF-ERGVEPDNFTFP 135
G + E+E FE+ A+ YN M + T
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK----------------- 178
+ K + + G QIHG V K+GFE L V + L+ MY
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 179 --------------CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
C +E A +F+ M++ SV SW+A+I A NGL E ++ F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + ++ SVL AC LGA++ GK H +IR ++ V ++LIDMY KC CL
Sbjct: 263 VQGL-KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F M K ++++ M+ G G+ +EA+ IF +M R G++PD +SAC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
++ + EG F + ++ V +V L G+ G + ++ L M + ++ V
Sbjct: 382 ANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVS 439
Query: 405 WRSLLSA 411
W +++SA
Sbjct: 440 WTAMVSA 446
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/574 (37%), Positives = 329/574 (57%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEE----FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L+ C +LE ++HA +K G + F ++ L+ S G M+ A +F
Sbjct: 1041 SVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDV--YSKRGKMEEAEFLFVNQ 1098
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D +N ++ G++ +F +AL LY M E G D T KA L LK+G
Sbjct: 1099 DGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGK 1158
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH V K GF DLFV + +++MY KC ++E A +F ++ +W+ +I+ NG
Sbjct: 1159 QIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENG 1218
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + +M K +P+E +++ AC+ L AL+ G+ H ++++ A + V
Sbjct: 1219 QEEHALFTYHQMRLSKV-QPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVM 1277
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
TSL+DMY KCG +E LF+ + +++ MI GLA HG KEAL F M G+
Sbjct: 1278 TSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVM 1337
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V ++GVLSACSH+GLV+E F M+ Y I P ++HY C+VD + RAG + EA +
Sbjct: 1338 PDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEK 1397
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I SMP + + ++R+LL+A +V + E G+ A+ L + + YVLLSN+YA A +
Sbjct: 1398 VISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQ 1457
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W +VA R M + + PGFS V++ KV+ FV+ DRSH D IY + + +++
Sbjct: 1458 WENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIRE 1517
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY PD L DV+E++K L HS+KLAIA+ L+ + +R+ +NLR+C DCH+
Sbjct: 1518 EGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSA 1577
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS +++REI++RD RFH F++G CSC DYW
Sbjct: 1578 IKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 188/388 (48%), Gaps = 14/388 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQI 91
LT++ LE K++H V++ G + + V C ++ + GS+ A S+F Q+
Sbjct: 942 LTVVAGLNCLELGKQIHGIVMRSGL--DQVVS---VGNCLINMYVKAGSVSRARSVFGQM 996
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ-ALKEG 150
+E +NT+I G E ++ ++ + + PD FT ++ +AC+ L+
Sbjct: 997 NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLA 1056
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
QIH K G D FV +LI++Y K K+E A +F D +ASW+AI+ + +
Sbjct: 1057 TQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + + L+L+ M E R ++ LV+ A L L GK H +++ L++ V
Sbjct: 1117 GDFPKALRLYILM-QESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ ++DMY+KCG +E +F + + ++ MISG +GQ + AL + +M +
Sbjct: 1176 TSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKV 1235
Query: 331 EPDDVVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+PD+ + ++ ACS + +G + + +KL P V +VD+ + G + +A
Sbjct: 1236 QPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVM--TSLVDMYAKCGNIEDA 1293
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHN 417
L + ++ W +++ H N
Sbjct: 1294 RGLFKRTNTRR-IASWNAMIVGLAQHGN 1320
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 152/340 (44%), Gaps = 23/340 (6%)
Query: 83 YACSIFRQIDE-PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
YA +F D+ +N + F++ E EA+ + +M V D TF +
Sbjct: 886 YATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV 945
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A L L+ G QIHG V + G + + V N LINMY K V A ++F QM++ + SW+
Sbjct: 946 AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWN 1005
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL-GALDLGKCTHGSLI 260
+I+ +GL + +F + + P++ + SVL AC+ L G L H +
Sbjct: 1006 TMISGCTLSGLEECSVGMFVHLLRDSLL-PDQFTVASVLRACSSLEGGYYLATQIHACAM 1064
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ L+ V T+LID+Y K G +E+ LF +++ ++ G + G +AL
Sbjct: 1065 KAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALR 1124
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
++ M G D + V A GLV +K +I V G +DL
Sbjct: 1125 LYILMQESGERSDQITLVNAAKAA--GGLVG--------LKQGKQIHAVVVKRGFNLDLF 1174
Query: 381 GRAGML------GE---ALELIQSMPIQQNDVVWRSLLSA 411
+G+L GE A + +P +DV W +++S
Sbjct: 1175 VTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISG 1213
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 161/420 (38%), Gaps = 52/420 (12%)
Query: 5 SVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILK---TCKNLEEFKKVHAHVLKWGFFW 61
+++H L P P +L +C +IL+ +L K+ HA +L G
Sbjct: 630 ALMHLRLRAATSTANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHP 689
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALFLY 119
+ F +NL+ A GS+ A +F + +N ++ + F
Sbjct: 690 DRFVTNNLITMYA--KCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHL 747
Query: 120 NEMFERGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ R V T +FK C + +HG+ K+G + D+FV +L+N+Y K
Sbjct: 748 FRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAK 807
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
+ A +F M + V W+ ++ A+ L E + LF E + +RP++ L
Sbjct: 808 FGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEF-HRTGFRPDDVTL-- 864
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
+L R + I+E Y LF D
Sbjct: 865 ------------------RTLSRVVKCKKNILELKQFKAYAT--------KLFMYDDDGS 898
Query: 299 Q-LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+ ++ +S G+ EA+ F +M+ + D + +V +L+ + GL C
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVA-------GLNCL 951
Query: 358 DRMKLEYRIV------PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ K + IV V C++++ +AG + A + M + + + W +++S
Sbjct: 952 ELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLISWNTMISG 1010
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 318/565 (56%), Gaps = 9/565 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
L +++HA LK NP ++L+ A C L H A +F ++ P +
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLH-----RAQRVFDEMPHPSTVSWT 188
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
LI ++ + EA+ + F G+ PD+FT + ACA++ L G + +
Sbjct: 189 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQE 248
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G +FV + +++Y KC ++ A +F +M K +W A++ +ASNG E L LF
Sbjct: 249 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 308
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M E RP+ + LSACT LGALDLG+ + + N ++ T+LIDMY K
Sbjct: 309 LAMQAEGV-RPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 367
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + +F+ M K + ++ MI GL M G K A ++ +M + G++ +D ++G+
Sbjct: 368 CGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGL 427
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L +C+H GL+ +G F M Y I P ++HYGC+VDL+ RAG+L EA +LI MP+
Sbjct: 428 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA 487
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N V+ +LL K+H N E+ E L ++ + +YV+LSN+Y+ RW D AK+R
Sbjct: 488 NAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 547
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
+M KG+ + P S VE KV++F D+SHP D IY+ + ++ ++K GY P
Sbjct: 548 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 607
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
V+ DV+++EK L HS+KLAIAF L+ G IR+ +NLR+C+DCHT KLIS I
Sbjct: 608 VMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITH 667
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH F+DG+CSC DYW
Sbjct: 668 REIIVRDNNRFHCFRDGSCSCNDYW 692
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 6/283 (2%)
Query: 129 PDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P + TFP K+ ++L L+ G Q+H K+ + V SL+ +Y +C + A
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F +M S SW+A+I A+ G E + + RP+ V VL+AC +
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHV-ARNAFANGMRPDSFTAVRVLTACARVA 233
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L G+ + + A +V V T+ +D+YVKCG + K +F M DK + + M+
Sbjct: 234 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 293
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRI 366
G A +G +EAL +F M EG+ PD G LSAC+ G ++ G + E+
Sbjct: 294 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 353
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G EA + Q M +++ +VW +++
Sbjct: 354 NPVLG--TALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 393
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 5/187 (2%)
Query: 228 CWRPEESIL---VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
C P S L +++ SA L G+ H ++ S N V TSL+ +Y +CG L
Sbjct: 110 CLLPNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLL 169
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ +F M ++++ +I+ G +EA+ + G+ PD V VL+AC
Sbjct: 170 HRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC 229
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ + G + R + I +V VDL + G + +A E+ M ++ V
Sbjct: 230 ARVADLATGETVW-RAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-DKDAVA 287
Query: 405 WRSLLSA 411
W +++
Sbjct: 288 WGAMVGG 294
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/636 (36%), Positives = 351/636 (55%), Gaps = 68/636 (10%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWG---------FFWNPF--CASNLVATCAL------- 75
+L +C + L+ KKVH+ V+K G N + C +++A
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210
Query: 76 -SHWGSM----------DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
S W +M D A ++F Q+ +P +N++I G+ + AL ++ M +
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270
Query: 125 RG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
++PD FT ++ ACA ++LK G QIH H+ + + V N+LI+MY K VE
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVE 330
Query: 184 FA---------------------------------SAIFKQMDQKSVASWSAIIAAHASN 210
A AIF + + V +W+A+I +A N
Sbjct: 331 VAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN 390
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL S+ L LF M E +P L +VLS + L +LD GK H IR +V V
Sbjct: 391 GLISDALVLFRLMIREGP-KPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSV 449
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+LI MY + G ++ +F + + LT++ MI LA HG G EA+ +F +MLR
Sbjct: 450 GNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRIN 509
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L+PD + YVGVLSAC+H GLV +G F+ MK + I PT HY C++DL+GRAG+L EA
Sbjct: 510 LKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEA 569
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
I++MPI+ + V W SLLS+ +VH +++ ++AA+ L I+ ++ Y+ L+N +
Sbjct: 570 YNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSAC 629
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W D AK+R M K + + GFS V++ KV+ F +D HP D IY MI ++ ++
Sbjct: 630 GKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEI 689
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K G+ PD + VL D++++ K + L+ HS+KLAIAFALI+ + + +RI +NLR+CNDCH
Sbjct: 690 KKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCH 749
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ + IS++ EREIIVRD RFH FKDG+CSC+DYW
Sbjct: 750 SAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 72/419 (17%)
Query: 55 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE 114
LK F WN +++ A G++D A +F +I +P + + T+I G+ F+
Sbjct: 76 LKTTFSWNTILSAHAKA-------GNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKS 128
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
A+ + M G+ P FTF + +CA QAL G ++H V K+G + V NSL+N
Sbjct: 129 AVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLN 188
Query: 175 MYGKC-----EKVEF--------------------------ASAIFKQMDQKSVASWSAI 203
MY KC KV F A A+F QM + SW++I
Sbjct: 189 MYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSI 248
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-- 261
I + G L+ F M +P++ L SVLSAC + +L LGK H ++R
Sbjct: 249 ITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRAD 308
Query: 262 -------------------------------NISALNVIVETSLIDMYVKCGCLEKGLCL 290
+LNVI TSL+D Y K G ++ +
Sbjct: 309 VDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAI 368
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + + + ++ MI G A +G +AL +F M+REG +P++ VLS S +
Sbjct: 369 FDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASL 428
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ G + + V +V ++ + R+G + +A ++ + ++ + W S++
Sbjct: 429 DHGKQ-LHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMI 486
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 113/282 (40%), Gaps = 70/282 (24%)
Query: 135 PALFKACAKL--QALKE-----GMQIHGHVFKVGFE-CDLFVQNSLINMYGKCEKVEFAS 186
P+ AC L A+K G IH + K G +F+ N+L+N+Y K A
Sbjct: 9 PSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAH 68
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCW--------------- 229
+F +M K+ SW+ I++AHA G ++F E+ + W
Sbjct: 69 RLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKS 128
Query: 230 -------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
P + +VL++C ALD+GK H +++ + V V SL++
Sbjct: 129 AVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLN 188
Query: 277 MYVKCG------------------------------C-LEKGLCLFRMMADKCQLTYSVM 305
MY KCG C + L LF M D ++++ +
Sbjct: 189 MYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSI 248
Query: 306 ISGLAMHGQGKEALSIFSEMLR-EGLEPDDVVYVGVLSACSH 346
I+G G AL FS ML+ L+PD VLSAC++
Sbjct: 249 ITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACAN 290
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/631 (35%), Positives = 343/631 (54%), Gaps = 51/631 (8%)
Query: 24 ELNLRLKEQECLTILKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E R + + +L C ++ K+ H + N F + LV A +G
Sbjct: 222 EFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYA--KFGM 279
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER--------------- 125
MD A ++F + +N ++ G+ + FE+A+ L+ +M E
Sbjct: 280 MDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISG 339
Query: 126 --------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV----- 160
G++P+ T ++ CA + AL G +IH + K
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLR 399
Query: 161 --GFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSEC 216
G + V N LI+MY KC+KV+ A A+F + ++ V +W+ +I ++ +G ++
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 217 LKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNI-SALNVIVETSL 274
L+L EM E C RP + L AC L AL +GK H +RN +A+ + V L
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCL 519
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG + +F M +K ++T++ +++G MHG G+EAL IF EM R G + D
Sbjct: 520 IDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDG 579
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V + VL ACSH+G++++G+ F+RMK ++ + P +HY C+VDL+GRAG L AL LI+
Sbjct: 580 VTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP++ VVW +LLS ++H +E+GE AAK + ++ S++ Y LLSNMYA A RW D
Sbjct: 640 EMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKD 699
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V +IR+ M KG+ + PG S VE + F D++HP IY+++ ++K GY
Sbjct: 700 VTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGY 759
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P+ L DVD++EK + L HS+KLA+A+ ++ QG+ IRI +NLR+C DCHT
Sbjct: 760 VPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTY 819
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S I + EII+RD RFH FK+G CSC+ YW
Sbjct: 820 MSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 169/350 (48%), Gaps = 40/350 (11%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI--DEPGAFD 98
CK + + K +H +L +G S+L++T G + +A S+ R+ + G +
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNL-TSHLIST--YISLGCLSHAVSLLRRFPPSDAGVYH 94
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N+LIR + + L + M PDN+TFP +FKAC ++ +++ G H
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
GF ++FV N+L+ MY +C + A +F +M V SW++II ++A G L+
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
+F +M NE +RP++ LV+VL C +G LGK HG + + N+ V L+DMY
Sbjct: 215 MFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMY 274
Query: 279 VKCGCLEKGLCLFR------------MMADKCQL-----------------------TYS 303
K G +++ +F M+A Q+ T+S
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
ISG A G G EAL + +ML G++P++V + VLS C+ G + G
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 14/282 (4%)
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-- 192
P C + +K IH + G L + + LI+ Y + A ++ ++
Sbjct: 32 PPFIHKCKTISQVK---LIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPP 87
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
V W+++I ++ +NG ++CL F M++ W P+ V AC + ++ G
Sbjct: 88 SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLS-WTPDNYTFPFVFKACGEISSVRCG 146
Query: 253 KCTHGSLIRNISAL-NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
+H +L R + NV V +L+ MY +CG L +F M ++++ +I A
Sbjct: 147 DSSH-ALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAK 205
Query: 312 HGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
G+ K AL +FS+M E G PDD+ V VL C+ G + G F + ++ +
Sbjct: 206 LGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQ-FHGFAVTSEMIQNM 264
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
C+VD+ + GM+ EA + +MP++ DVV W ++++
Sbjct: 265 FVGNCLVDMYAKFGMMDEANTVFSNMPVK--DVVSWNAMVAG 304
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/605 (36%), Positives = 345/605 (57%), Gaps = 42/605 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C LE+ + KV+A + G N S LV ++D A +F DE
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM--YMKCNAIDVAKRLF---DE 296
Query: 94 PGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
GA + N + +V++ EAL ++N M + GV PD + + +C++L+ + G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
HG+V + GFE + N+LI+MY KC + + A IF +M K+V +W++I+A + N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 211 G-------------------------------LWSECLKLFGEMNNEKCWRPEESILVSV 239
G L+ E +++F M +++ + ++S+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
SAC HLGALDL K + + +N L+V + T+L+DM+ +CG E + +F + ++
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++ I +AM G + A+ +F +M+ +GL+PD V +VG L+ACSH GLV +G F
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M + + P HYGC+VDL+GRAG+L EA++LI+ MP++ NDV+W SLL+A +V N+E
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVE 656
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+ AA+ + + YVLLSN+YA A RW D+AK+R M KGL + PG S +++
Sbjct: 657 MAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
K ++F S D SHP NI M+ ++ + G+ PD+S VL DVDE EK L HS+
Sbjct: 717 GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSE 776
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLA+A+ LI ++G+ IRI +NLR+C+DCH++ K S +Y REII+RD RFH + G C
Sbjct: 777 KLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKC 836
Query: 600 SCRDY 604
SC D+
Sbjct: 837 SCGDF 841
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 212/440 (48%), Gaps = 35/440 (7%)
Query: 5 SVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPF 64
+VLH S ++ K LN + + LK CK ++E K H + K G +
Sbjct: 6 NVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVS 65
Query: 65 CASNLVA-TCALSHWGSMDYACSIFRQIDEPGA-FDFNTLIRGFVKEVEFEEALFLYNEM 122
+ LVA +C L S+ +A +F + G F +N+LIRG+ EA+ L+ M
Sbjct: 66 TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
G+ PD +TFP ACAK +A G+QIHG + K+G+ DLFVQNSL++ Y +C ++
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
+ A +F +M +++V SW+++I +A + + LF M ++ P +V V+SA
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 243 CTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C L L+ G+ + + IRN +N ++ ++L+DMY+KC ++ LF
Sbjct: 246 CAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLV 350
+ M S G +EAL +F+ M+ G+ PD + + +S+CS H ++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 351 NEGLLCFD--------------RMKLEYRIV-----PTVQHYGCVVDLMGRAGMLGEALE 391
G +D R +RI TV + +V G + A E
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
++MP ++N V W +++S
Sbjct: 425 TFETMP-EKNIVSWNTIISG 443
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 184/386 (47%), Gaps = 47/386 (12%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H ++K G+ + F ++LV A G +D A +F ++ E + ++I G+ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 109 EVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++A+ L+ M + V P++ T + ACAKL+ L+ G +++ + G E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ ++L++MY KC ++ A +F + ++ +A+ + + GL E L +F M +
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
RP+ ++S +S+C+ L + GK HG ++RN + +LIDMY+KC +
Sbjct: 333 V-RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHG----------------------------QG---K 316
+F M++K +T++ +++G +G QG +
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 317 EALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCF-----DRMKLEYRIVPTV 370
EA+ +F M +EG+ D V + + SAC H G ++ + + ++L+ R+ T
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT- 510
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSM 396
+VD+ R G A+ + S+
Sbjct: 511 -----LVDMFSRCGDPESAMSIFNSL 531
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 326/558 (58%), Gaps = 2/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K VH ++ GF N F + LV S +G M A +F + E +N ++ G+
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDM--YSKFGCMGVARQLFESMSERNVVSWNAIVSGYS 199
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
EEA+ L+N M +G+ D +T +L A + L+ G IHG + + G+E D
Sbjct: 200 DHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH 259
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
++ +L+++Y V+ A +F +M K VA+W+ ++ +S W +K F +M +
Sbjct: 260 IKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQ 319
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ + +L+ +LS+C+H GAL G+ H I+ A N+ V +++IDMY CG LE
Sbjct: 320 NLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
F M +K + ++ MI+G M+G G +A+ +F +M GL+PD+ +V VL ACSHA
Sbjct: 380 KRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHA 439
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G+V EGL F M +P +QHY CV+D++GRAG L A I +MP Q + V+ +
Sbjct: 440 GMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A ++H N+++G ++ +F++ + YVLLSNMYA A W V R + SK L
Sbjct: 500 LLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRL 559
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PGFS +E+ +++Y F++ ++ HP + I ++ + ++K GY P+ + +L+DV +
Sbjct: 560 KKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSD 619
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
D K++ L HS+K+AIAF L+ G+ IRI +NLR CNDCH+ +K +S ++ R ++++D
Sbjct: 620 DMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKD 679
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH F+DG CSCRDYW
Sbjct: 680 ANRFHVFQDGVCSCRDYW 697
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 228/489 (46%), Gaps = 20/489 (4%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
Q +IL+ K+L+ +++HA ++ G N F +++L+ A + G + A IF
Sbjct: 25 QSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMN--AYVYCGLLADAKQIFHHT 82
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ LI G K F EA+ ++ EM +P+ T ++ A A L ++
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H + GFE ++FV+ +L++MY K + A +F+ M +++V SW+AI++ ++ +G
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHG 202
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + LF M K + ++S++ A +G L +G HG +IR + ++
Sbjct: 203 FSEEAIDLFNLM-RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK 261
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGL 330
T+L+D+YV C++ +F M K +++M++G + A+ F++ML + L
Sbjct: 262 TALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNL 321
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D +V +G+LS+CSH+G + +G + ++ + V+D+ G L +A
Sbjct: 322 KLDSIVLMGILSSCSHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH--HPSDYVLLSNMYA- 447
M +++ V W ++++ + ++ G A Q+ P + +S +YA
Sbjct: 381 RFFYGMG-EKDVVCWNAMIAGNGMN---GYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436
Query: 448 -RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A Y+ +I M K + P + Q D Y I+ M
Sbjct: 437 SHAGMVYEGLQIFYHMV-KTSHDIPNLQHYACVIDILGRAGQ------LDAAYSFINNMP 489
Query: 507 WQLKFEGYS 515
+Q F+ YS
Sbjct: 490 FQPDFDVYS 498
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/619 (35%), Positives = 336/619 (54%), Gaps = 22/619 (3%)
Query: 3 RTSVLHQSLLLTQPEEPPKGPELNLRLKEQEC------------LTILKTCKNLEEFKKV 50
R SV +LL +E +NL K QE LT ++E ++V
Sbjct: 262 RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQV 321
Query: 51 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFV 107
H V+K F WN F A+ L L + D A +F ++ E +N L+ +
Sbjct: 322 HGFVVKCNFVWNVFVANAL-----LDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYA 376
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+E+L L+ E+ G + NF F L A L G QIH ++
Sbjct: 377 WNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEIL 436
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSL++MY KC + A+ IF + +S W+A+I+++ GL + LKLF EM K
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK 496
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ + S++ AC L +L LGK H +I + NV ++L+DMY KCG ++
Sbjct: 497 IG-ADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDA 555
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
L +F+ M + ++++ +IS A +G G L +F EM+R GL+PD V + +L ACSH
Sbjct: 556 LQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHC 615
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV EGL FD M Y++VP +HY +D++ R G EA +L+ MP + ++++W S
Sbjct: 616 GLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSS 675
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L++ +H N E+ + AA LF + + YV +SN+YA A W +V K++ M +G
Sbjct: 676 VLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERG 735
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ K + F + D++HP I + + ++E ++ +GY PD S L +VD
Sbjct: 736 VKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVD 795
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+ K E LK HS+++AIAFALI +GSPI + +NLR C DCH K+IS I REI VR
Sbjct: 796 EEVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVR 855
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F+DG C+CRDYW
Sbjct: 856 DSSRFHHFRDGFCTCRDYW 874
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 187/369 (50%), Gaps = 5/369 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
++ E ++VH+HV+K G+ +++L+ + + S+ A +F I E + FN L
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTR--SLGLAFQLFNDIPERDSVTFNAL 270
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ G+ KE EA+ L+ +M E G P FTF A+ A +L ++ G Q+HG V K F
Sbjct: 271 LTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNF 330
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
++FV N+L++ Y K ++V AS +F +M + S++ ++ +A NG E L+LF E
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKE 390
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
+ R ++LS LD+G+ H I + ++V SL+DMY KCG
Sbjct: 391 LQFTGFDR-RNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCG 449
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ +F +A + + ++ MIS G ++ L +F EM R + D Y ++
Sbjct: 450 EFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVR 509
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
AC+ + G + + + V +VD+ + G + +AL++ Q MP+ +N
Sbjct: 510 ACASLASLTLGKQLHSHI-IGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPV-RNS 567
Query: 403 VVWRSLLSA 411
V W +L+SA
Sbjct: 568 VSWNALISA 576
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 169/333 (50%), Gaps = 3/333 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A ++F + + A + LI G+ + +F EA L+ EM G++PD+ + L
Sbjct: 146 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLL 205
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ ++ E Q+H HV K+G++ L V NSL++ Y K + A +F + ++
Sbjct: 206 SGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSV 265
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+++A++ ++ G E + LF +M E +RP E ++L+A L ++ G+ HG
Sbjct: 266 TFNALLTGYSKEGFNREAINLFFKM-QEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGF 324
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+++ NV V +L+D Y K + + LF M + ++Y+V+++ A +G+ KE+
Sbjct: 325 VVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKES 384
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F E+ G + + + +LS + + ++ G + + + + +VD
Sbjct: 385 LELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQT-IVTDAISEILVGNSLVD 443
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ + G GEA + + IQ + V W +++S+
Sbjct: 444 MYAKCGEFGEANRIFSDLAIQSS-VPWTAMISS 475
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
N+ ++I Y+K G L + LF M + +T++++I G A + Q +EA +F EM
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGM 385
R G++PD V +LS + VNE +KL Y V + ++D +
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSN--SLLDSYCKTRS 248
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA-SKVHHNLEIGEIAAKNLF---QINSHHPSDYVL 441
LG A +L +P +++ V + +LL+ SK N E A NLF Q + P+++
Sbjct: 249 LGLAFQLFNDIP-ERDSVTFNALLTGYSKEGFNRE-----AINLFFKMQEVGYRPTEFTF 302
Query: 442 LSNMYARAQ 450
+ + A Q
Sbjct: 303 AAILTAGIQ 311
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/558 (37%), Positives = 332/558 (59%), Gaps = 10/558 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L K++H + LK F +N A+ VA+ A GS+ YA +F I +N LI
Sbjct: 766 LPSLKELHCYSLKQEFVYNELVANAFVASYA--KCGSLSYAQRVFHGIRSKTVNSWNALI 823
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G + + +L + +M G+ PD+FT +L AC+KL++L+ G ++HG + + E
Sbjct: 824 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 883
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV S++++Y C ++ A+F M+ KS+ SW+ +I + NG L +F +M
Sbjct: 884 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 943
Query: 224 ---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+ C ++ V AC+ L +L LG+ H ++++ + + SLIDMY K
Sbjct: 944 VLYGIQLCGIS----MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 999
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
G + + +F + +K +++ MI G +HG KEA+ +F EM R G PDD+ ++GV
Sbjct: 1000 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 1059
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L+AC+H+GL++EGL D+MK + + P ++HY CV+D++GRAG L +AL ++ ++
Sbjct: 1060 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 1119
Query: 401 NDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
DV +W+SLLS+ ++H NLE+GE A LF++ P +YVLLSN+YA +W DV K+R
Sbjct: 1120 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 1179
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M L + G S +E+ RKV+ FV +R ++ I + +E ++ GY PD
Sbjct: 1180 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 1239
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
V D+ E+EK E+L+GHS+KLA+ + LI S+G+ IR+ +NLR+C DCH KLIS +
Sbjct: 1240 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 1299
Query: 580 EREIIVRDRKRFHRFKDG 597
EREI+VRD KRFH FK+G
Sbjct: 1300 EREIVVRDNKRFHHFKNG 1317
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 6/274 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPAL 137
GS D + +F + F +N +I + + ++E L + EM + PD+FT+P +
Sbjct: 489 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 548
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
KACA + + G+ +HG V K G D+FV N+L++ YG V A +F M ++++
Sbjct: 549 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 608
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEM---NNEKCWRPEESILVSVLSACTHLGALDLGKC 254
SW+++I + NG E L GEM N + + P+ + LV+VL C + LGK
Sbjct: 609 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 668
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG ++ +++ +L+DMY KCGC+ +F+M +K ++++ M+ G + G
Sbjct: 669 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 728
Query: 315 GKEALSIFSEMLREG--LEPDDVVYVGVLSACSH 346
+ +ML G ++ D+V + + C H
Sbjct: 729 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 762
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 16/320 (5%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIFRQ 90
++K C + + VH V+K G + F + LV S +G+ + A +F
Sbjct: 548 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV-----SFYGTHGFVTDALQLFDI 602
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE----PDNFTFPALFKACAKLQA 146
+ E +N++IR F EE+ L EM E + PD T + CA+ +
Sbjct: 603 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 662
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G +HG K+ + +L + N+L++MY KC + A IFK + K+V SW+ ++
Sbjct: 663 IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 722
Query: 207 HASNGLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
++ G + +M + + +E +++ + C H L K H ++
Sbjct: 723 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 782
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N +V + + Y KCG L +F + K +++ +I G A + +L +M
Sbjct: 783 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 842
Query: 326 LREGLEPDDVVYVGVLSACS 345
GL PD +LSACS
Sbjct: 843 KISGLLPDSFTVCSLLSACS 862
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 13/283 (4%)
Query: 137 LFKACAKLQALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L +A K + ++ G +IH V D + +I MY C + + +F + K
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ W+A+I++++ N L+ E L+ F EM + P+ V+ AC + + +G
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +++ +V V +L+ Y G + L LF +M ++ ++++ MI + +G
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 316 KEALSIFSEMLRE----GLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVP 368
+E+ + EM+ E PD V VL C+ + G +++L+ +V
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G + A ++I M +N V W +++
Sbjct: 685 N----NALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 722
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/568 (38%), Positives = 317/568 (55%), Gaps = 42/568 (7%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTF 134
+H G M+ A S+F + E +NT+I G+ + AL ++ M +EPD FT
Sbjct: 424 THQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTV 483
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ--- 191
++ ACA L+ LK G Q+H ++ + G C + N+LI+ Y K VE A I Q
Sbjct: 484 TSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVV 543
Query: 192 ------------------------------MDQKSVASWSAIIAAHASNGLWSECLKLFG 221
M+ + V +W+A+I + NG E ++LF
Sbjct: 544 ADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFR 603
Query: 222 EM---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
M E P L +VLSAC L LD GK H IR++ +V V ++I +Y
Sbjct: 604 SMILIGPE----PNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVY 659
Query: 279 VKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
+ G + +F + K +T++ MI +A HG G++A+ +F EM+R G++PD + Y
Sbjct: 660 ARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITY 719
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
VGVLSAC+HAG V++G +++M+ E+ IVP + HY C+VDL RAG+L EA E IQ MP
Sbjct: 720 VGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMP 779
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
+ + VVW SLL+A +V N ++ E+AA L I+ H+ Y L+N+Y+ RW D A+
Sbjct: 780 VAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAAR 839
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
I KG+ + GFS V KV+ F + D HP D+IY +M ++K G+ PD
Sbjct: 840 IWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPD 899
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
++ VL DVD++ K E L HS+KLAIAF LI + + +RI +NLR+CNDCHT K IS
Sbjct: 900 LNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISK 959
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+REIIVRD RFH F+DG CSC+DYW
Sbjct: 960 FVDREIIVRDATRFHHFRDGYCSCKDYW 987
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/482 (23%), Positives = 197/482 (40%), Gaps = 104/482 (21%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA-------------------- 74
L + +T N + +HAH +K G + + +NL+A A
Sbjct: 216 LQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIP 275
Query: 75 ---------------LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
+ G + A +F ++ + A + +I G + F +A+ +
Sbjct: 276 YARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
+M G P FT + +CA ++A G ++H V K+G + V NS++ MYGKC
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC 395
Query: 180 EKVEFASAIFKQMD-------------------------------QKSVASWSAIIAAHA 208
E A A+F++M ++S+ SW+ IIA +
Sbjct: 396 GDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYN 455
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN------ 262
NGL LK F M + P+ + SVLSAC +L L +GK H ++R
Sbjct: 456 QNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSS 515
Query: 263 ---------------------------ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
++ LNVI T+L++ YVK G ++ +F +M
Sbjct: 516 QIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMN 575
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG-- 353
++ + ++ MI G +GQ EA+ +F M+ G EP+ VLSAC+ ++ G
Sbjct: 576 NRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQ 635
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
+ C L+ + +V ++ + R+G + A + + ++ + W S++ A
Sbjct: 636 IHCKAIRSLQEQ---SVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMA 692
Query: 414 VH 415
H
Sbjct: 693 QH 694
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 344/571 (60%), Gaps = 15/571 (2%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS---MDYACSIFRQIDEPGAFDFN 100
+++ +++H + G N +V T +S +G +D A + F ++ + +N
Sbjct: 47 IDQGREIHRYARISGLLPNV-----VVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWN 101
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
++ + + EAL L+ EM ER PD F+F +AC+ L+ L++G +IH +
Sbjct: 102 AMMTNYKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLR 161
Query: 159 KVGFEC--DLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIAAHASNGLWS 214
+ G E D+ V +L+NMY KC +E A +F + D SV W+A+IAA+A +G
Sbjct: 162 REGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVC-WNAMIAAYAQHGRGK 220
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ L L+ M++ P++ V+V+ C L AL G+ H + N++V +L
Sbjct: 221 QALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNAL 280
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+ MY KCGCL++ L +F M K +++++ +IS A HG +AL ++ EM +G++P +
Sbjct: 281 VHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTE 340
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V +VG+LSACSH GLV +GL F RM+ ++RI P+V H+GC++DL+GR G L EA +++
Sbjct: 341 VTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLK 400
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SMPIQ N V W SLL A K H +L+ G AA + YVLLSN+YA A RW D
Sbjct: 401 SMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKD 460
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V KIR MA++G+ +SPG S +E+ V++FVS DRSHP + IY + +M ++K GY
Sbjct: 461 VEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGY 520
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD S V D++E+EK + L HS+KLAI + + + S +RI +NLR+C DCHT TK
Sbjct: 521 VPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKF 580
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S I R+I+VRD RFH F++G+CSCRDYW
Sbjct: 581 MSRITGRKIVVRDAARFHLFENGSCSCRDYW 611
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 164/309 (53%), Gaps = 9/309 (2%)
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQA--LKEGMQIHGHVFKVGFECDLFVQNS 171
EAL + M++ G PD TF + A A++ A + +G +IH + G ++ V +
Sbjct: 12 EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWR 230
+I+MYGKC +++ A A F+++ K+ +W+A++ + +G E L+LF EM + R
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL--NVIVETSLIDMYVKCGCLEKGL 288
P++ + AC++L L+ G+ H L R L +V+V T+L++MY KCG LE+
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEAR 191
Query: 289 CLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML-REGLEPDDVVYVGVLSACSH 346
+F + D + ++ MI+ A HG+GK+AL ++ M L P +V V+ C+
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 251
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
+ +G R++ + +V + G+ G L EAL++ SM + ++++ W
Sbjct: 252 LSALKQGRAIHARVRAT-NFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL-KDEISWN 309
Query: 407 SLLSASKVH 415
+++S+ H
Sbjct: 310 TIISSYAYH 318
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 318/565 (56%), Gaps = 9/565 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
L +++HA LK NP ++L+ A C L H A +F ++ P +
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLH-----RAQRVFDEMPHPSTVSWT 141
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
LI ++ + EA+ + F G+ PD+FT + ACA++ L G + +
Sbjct: 142 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQE 201
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G +FV + +++Y KC ++ A +F +M K +W A++ +ASNG E L LF
Sbjct: 202 GIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M E RP+ + LSACT LGALDLG+ + + N ++ T+LIDMY K
Sbjct: 262 LAMQAEGV-RPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 320
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + +F+ M K + ++ MI GL M G K A ++ +M + G++ +D ++G+
Sbjct: 321 CGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGL 380
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L +C+H GL+ +G F M Y I P ++HYGC+VDL+ RAG+L EA +LI MP+
Sbjct: 381 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPA 440
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N V+ +LL K+H N E+ E L ++ + +YV+LSN+Y+ RW D AK+R
Sbjct: 441 NAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 500
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
+M KG+ + P S VE KV++F D+SHP D IY+ + ++ ++K GY P
Sbjct: 501 DMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 560
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
V+ DV+++EK L HS+KLAIAF L+ G IR+ +NLR+C+DCHT KLIS I
Sbjct: 561 VMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDCHTAIKLISRITH 620
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH F+DG+CSC DYW
Sbjct: 621 REIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 137/283 (48%), Gaps = 6/283 (2%)
Query: 129 PDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P + TFP K+ ++L L+ G Q+H K+ + V SL+ +Y +C + A
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F +M S SW+A+I A+ G E + + RP+ V VL+AC +
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHV-ARNAFANGMRPDSFTAVRVLTACARVA 186
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L G+ + + A +V V T+ +D+YVKCG + K +F M DK + + M+
Sbjct: 187 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 246
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRI 366
G A +G +EAL +F M EG+ PD G LSAC+ G ++ G + E+
Sbjct: 247 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G EA + Q M +++ +VW +++
Sbjct: 307 NPVLG--TALIDMYAKCGSTAEAWVVFQQMR-KKDIIVWNAMI 346
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 5/187 (2%)
Query: 228 CWRPEESIL---VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
C P S L +++ SA L G+ H ++ S N V TSL+ +Y +CG L
Sbjct: 63 CLLPNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLL 122
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ +F M ++++ +I+ G +EA+ + G+ PD V VL+AC
Sbjct: 123 HRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTAC 182
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ + G + R + I +V VDL + G + +A E+ M ++ V
Sbjct: 183 ARVADLATGETVW-RAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMR-DKDAVA 240
Query: 405 WRSLLSA 411
W +++
Sbjct: 241 WGAMVGG 247
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/611 (34%), Positives = 337/611 (55%), Gaps = 45/611 (7%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIF 88
L++ K C +L + K+VH +++GF + + L+ C S + + F
Sbjct: 82 LSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF 141
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R + + ++ +V EAL + +M G P++ T ++ AC L+ LK
Sbjct: 142 RDV-----ISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G ++HG V + G ++FV ++L+NMY C + A +F M ++ SW+ +I A+
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 209 SNGLWSECLKLFGEMNNEKC----------------------------------WRPEES 234
N + L +FG M +E ++P +
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
+ SVL ACT+L +L GK HG + R+ ++ T+L+ MY KCG LE +F MM
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+ ++++ MI +MHG G+EAL +F EM+ G+ P+ V + GVLS CSH+ LV+EGL
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
L FD M ++ + P H+ C+VD++ RAG L EA E I+ MPI+ W +LL +V
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
+ N+E+G IAA LF+I S +P +YVLLSN+ A+ W + ++ R M +G+ ++PG S
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
++V +V+ FV D+S+ D IY + M +++ GY P+ VL+DVD++EK E L
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+KLA+AF +++L+ S IR+ +NLR+C DCH K ++ I +IIVRD RFH F
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHF 676
Query: 595 KDGTCSCRDYW 605
+DG CSC+D+W
Sbjct: 677 RDGLCSCQDFW 687
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 149/289 (51%), Gaps = 6/289 (2%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTF 134
S+ G + A +F +I +P + LI K EA+ YN+ + VEPD
Sbjct: 22 SNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLL 81
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
++ KACA L+ + ++H + GF D+ + N+LI+MYGKC E A +F+ M
Sbjct: 82 LSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF 141
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLG 252
+ V SW+++ + + + GL E L F +M N E RP + S+L ACT L L G
Sbjct: 142 RDVISWTSMASCYVNCGLLREALGAFRKMGLNGE---RPNSVTVSSILPACTDLKDLKSG 198
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ HG ++RN NV V ++L++MY C + + +F M+ + ++++V+I+ ++
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+ ++ LS+F M+ EG+ + + V+ C G + L RM+
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQ 307
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%)
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
I +Y ++ A +F ++ Q + +W+ +I+A +G E ++ + + ++ C P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
++ +L+SV AC L + K H IR +V++ +LIDMY KC C E +F
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
M + ++++ M S G +EAL F +M G P+ V +L AC+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/573 (38%), Positives = 326/573 (56%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILK C F +++H ++K + + A LV A G +D A +F I
Sbjct: 308 SILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYA--KHGLLDDAKKVFDWIP 365
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +N LI G + EAL L+ M + G + + T A+ K+ A L+A+ + Q
Sbjct: 366 QRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQ 425
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K+GF D V N LI+ Y KC+ + +A +F++ + +++++I A +
Sbjct: 426 VHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDH 485
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ +KLF EM K P+ +L S+L+AC L A + GK H LI+ +V
Sbjct: 486 GEDAIKLFMEML-RKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGN 544
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ Y KCG +E F + +K +++S MI GLA HG GK AL +F M+ E + P
Sbjct: 545 ALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISP 604
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + VL AC+HAGLV+E F+ MK + I T +HY C++DL+GRAG L +A+EL
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMEL 664
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ SMP Q N VW +LL+AS+VH + E+G +AA+ LF + +VLL+N YA A W
Sbjct: 665 VNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DVAK+R M + + P S VE+ KV+ F+ D+SHP +IY + ++ +
Sbjct: 725 DDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKA 784
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P++ L DVD++EK L HS++LA+AFALI G+PIR+ +NLR+C DCH
Sbjct: 785 GYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAF 844
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REII+RD RFH F+DG CSCRDYW
Sbjct: 845 KFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 158/321 (49%), Gaps = 4/321 (1%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
++R E +LK + ++HA + G + F A+ LVA +G +D A
Sbjct: 98 SVRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVANALVAM--YGGFGFVDEAR 155
Query: 86 SIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F + E +N L+ +VK A+ ++ EM GV+P+ F F + AC
Sbjct: 156 MVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGS 215
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ L+ G ++H V + G++ D+F N+L++MY K + A+ +F ++ + V SW+A I
Sbjct: 216 RDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFI 275
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ +G L+L +M + P L S+L AC GA +LG+ HG +++ +
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGL-VPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA 334
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ + L+DMY K G L+ +F + + + ++ +ISG + Q EALS+F
Sbjct: 335 DSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCR 394
Query: 325 MLREGLEPDDVVYVGVLSACS 345
M +EG + + VL + +
Sbjct: 395 MRKEGFDVNRTTLAAVLKSTA 415
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 23/384 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFW---NPFCASNLVATCALSHWGSMDYACSIFRQI 91
LT ++L + +HAH+LK G F N + + C L GS A +F +I
Sbjct: 11 LTRYAATQSLLQGAHIHAHLLKSGLFAVFRNHLLS--FYSKCRLP--GS---ARRVFDEI 63
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+P +++L+ + +AL + M V + F P + K CA G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GT 120
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASN 210
Q+H G D+FV N+L+ MYG V+ A +F + +++ SW+ +++A+ N
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 211 GLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
S +K+FGEM W +P E V++ACT L+ G+ H +IR +
Sbjct: 181 DRCSHAVKVFGEM----VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +L+DMY K G + +F + + ++++ ISG +HG + AL + +M
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKS 296
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
GL P+ +L AC+ +G N G M +G +VD+ + G+L
Sbjct: 297 SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLD 355
Query: 388 EALELIQSMPIQQNDVVWRSLLSA 411
+A ++ +P Q++ V+W +L+S
Sbjct: 356 DAKKVFDWIP-QRDLVLWNALISG 378
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/578 (37%), Positives = 327/578 (56%), Gaps = 42/578 (7%)
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDE----PGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
S LVA A + G +D A +F ++ + P +N +I GF + EA+ ++ +M
Sbjct: 184 SALVA--AYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
RG EPD T ++ A L+ L G+ IHG+V K G D V ++LI+MYGKC
Sbjct: 242 HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCT 301
Query: 183 EFASAIFKQMD-----------------------------------QKSVASWSAIIAAH 207
S +F QMD + +V SW+++IA
Sbjct: 302 SEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACC 361
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ NG E L+LF EM +P + +L AC ++ AL GK H +R + +
Sbjct: 362 SQNGRDIEALELFREMQIAGV-KPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTD 420
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V ++LIDMY KCG ++ F + K + ++ +I+G AMHG+ KEA+ IF M R
Sbjct: 421 VYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQR 480
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G +PD + + VLSACS +GL EG F+ M +Y I V+HY C+V L+ RAG L
Sbjct: 481 SGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLE 540
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A +I+ MP+ + VW +LLS+ +VH+N+ +GE+AA+ LF++ +P +Y+LLSN+YA
Sbjct: 541 QAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYA 600
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
W +V ++R M +KGL ++PG S +EV KV+ ++ D+SHP I E + ++
Sbjct: 601 SKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSM 660
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
++K GY P+I+ VL+DV+E +K + L GHS+KLA+ F L++ G P+++ +NLR+C D
Sbjct: 661 EMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGD 720
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CH K IS REI VRD RFH FK+G CSC DYW
Sbjct: 721 CHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 177/360 (49%), Gaps = 42/360 (11%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS---MDYACSIFRQIDEPGA 96
T +L + ++ HAH+LK G F + A+ L LSH+ + A + + EP
Sbjct: 25 TTASLSQTRQAHAHILKTGLFNDTHLATKL-----LSHYANNMCFADATLVLDLVPEPNV 79
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F F+TLI F K +F AL +++M RG+ PDN P+ KACA L ALK Q+HG
Sbjct: 80 FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
GF+ D FVQ+SL++MY KC ++ A +F +M + V SWSA++AA+A G E
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199
Query: 217 LKLFGEMNNE----------------------------------KCWRPEESILVSVLSA 242
+LF EM + + + P+ + + SVL A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
L L +G HG +I+ + V ++LIDMY KC C + +F M +
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ I GL+ +GQ + +L +F ++ +G+E + V + +++ CS G E L F M++
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI 379
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/611 (36%), Positives = 330/611 (54%), Gaps = 39/611 (6%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
L +++L +C ++HA VL+ G A A + G +D + ++
Sbjct: 287 LTADRAVSLLTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALL 346
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R+ +P A + + I AL L ++M +G+ P T A AC + L
Sbjct: 347 RRTRDPTAIFYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPAC---RGLS 403
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM---------------- 192
G +HG+ FK+ D +V +L+ MY + A A+F M
Sbjct: 404 PGRALHGYAFKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCY 463
Query: 193 ----------------DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
K W+A+I + +G +E L+LF M P+E +
Sbjct: 464 ADMGALDDARSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGV-EPDEVTV 522
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNIS--ALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
V VLSA LG ++ GK H S ++N L+V V T+LIDMY KCG L + +F +
Sbjct: 523 VLVLSAVAQLGTVESGKWLH-SYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGI 581
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
DK + ++ MI+G AMHG ++AL +F + +GL P D+ ++G+L+ACSH+G+V EG
Sbjct: 582 GDKDIVVWNAMINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGR 641
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
F M+ EY I P ++HYGC+VDL+GRAG++ EA L+QSM I + V+W SLL+A ++
Sbjct: 642 EFFQSMEREYGIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRL 701
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H N+ +G+ A L + Y+LLSN+YA W +VA++R+ M + G+ + PG S
Sbjct: 702 HKNMSLGQQIADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCS 761
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+E+ R+VY+FV+ D SHP D IY M+ +M +K G+ P VL D+DE K + L
Sbjct: 762 SIEIDREVYEFVAGDMSHPRTDEIYVMLDKMNGLVKEHGHVPQTELVLHDLDEATKEKAL 821
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+KLA+AF LI G+ I+I +NLR C+DCH KLIS I R+I+ RDR RFH F
Sbjct: 822 AVHSEKLALAFGLISTQPGATIKIVKNLRACSDCHAVLKLISRITGRKIVFRDRNRFHHF 881
Query: 595 KDGTCSCRDYW 605
DG+CSC DYW
Sbjct: 882 VDGSCSCGDYW 892
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 336/589 (57%), Gaps = 34/589 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++ H +L+ GF N F S LV A G + A +F ++D +NT+I G +
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYA--KMGLIGDAKRVFDEMDGKNVVMYNTMITGLL 217
Query: 108 KEVEFEEALFLYNEMFER-------------------------------GVEPDNFTFPA 136
+ EEA L+ M +R G+ D +TF +
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ AC L AL++G QIH ++ + ++ ++FV ++L++MY KC ++ A F++M K+
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKN 337
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ SW+A+I + NG E +++F EM + P++ L SV+S+C +L +L+ G H
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGI-DPDDFTLGSVISSCANLASLEEGAQFH 396
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ + + V +L+ +Y KCG +E LF M Q++++ +++G A G+ K
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
E + +F +ML + ++PD V ++GVLSACS AG V +G F M+ ++ IVP HY C+
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM 516
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
+DL R+G L EA E I+ MP+ + + W +LLSA ++ ++EIG+ AA+NL +I+ +P
Sbjct: 517 IDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNP 576
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLL +M+A W VA++R M + + + PG S ++ KV+ F + D+SHP
Sbjct: 577 ASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSK 636
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
IYE + + ++ EGY PD+S VL DV + +K + HS+KLAIAF L+ + PI
Sbjct: 637 GIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPI 696
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLR+C DCH TKLIS I R+I+VRD RFH+F +G CSC D+W
Sbjct: 697 RIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 177/383 (46%), Gaps = 38/383 (9%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
N F + L++T L+H +D S+F + + +N +I GF A+ LY+
Sbjct: 71 NLFTYNALLST--LAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHT 128
Query: 122 MFERG--VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
+ G V P T A+ A + L G Q H + ++GF + FV + L+ MY K
Sbjct: 129 LLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKM 188
Query: 180 EKVEFASAIFKQMDQKSVA-------------------------------SWSAIIAAHA 208
+ A +F +MD K+V +W+ ++
Sbjct: 189 GLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFT 248
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
NGL S+ L F M + ++ S+L+AC L AL+ GK H +IR NV
Sbjct: 249 QNGLESQALNFFRRMRFQGI-AIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNV 307
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY KC ++ FR M+ K ++++ +I G +G +EA+ +FSEM R+
Sbjct: 308 FVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PDD V+S+C++ + EG F + L ++ + +V L G+ G + +
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIED 426
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
A L M + + V W +L++
Sbjct: 427 AHRLFDEM-LFHDQVSWTALVTG 448
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 135/257 (52%), Gaps = 9/257 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C LE+ K++HA++++ + N F S LV S S+ A + FR++
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDM--YSKCRSIKPAETAFRRMS 334
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ LI G+ + EEA+ +++EM G++PD+FT ++ +CA L +L+EG Q
Sbjct: 335 CKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQ 394
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V N+L+ +YGKC +E A +F +M SW+A++ +A G
Sbjct: 395 FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGR 454
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M + +P+ + VLSAC+ G ++ G C++ ++ + I +
Sbjct: 455 AKETIDLFEKMLAKDV-KPDGVTFIGVLSACSRAGFVEKG-CSYFHSMQKDHGIVPIDDH 512
Query: 272 -TSLIDMYVKCGCLEKG 287
T +ID+Y + G L++
Sbjct: 513 YTCMIDLYSRSGRLKEA 529
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/572 (37%), Positives = 330/572 (57%), Gaps = 39/572 (6%)
Query: 64 FCASNLVATCALSHW----GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
F SNL H G ++YA IF D +N ++ G+ + +EE+ L+
Sbjct: 166 FLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLF 225
Query: 120 NEMFERG--VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF-ECDLFVQNSLINMY 176
EM ++ V P++ T + AC+KL+ L G I+ K G E +L ++N+LI+M+
Sbjct: 226 IEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMF 285
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN-------------------------- 210
C +++ A +F +M + V SW++I+ A+
Sbjct: 286 ASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMID 345
Query: 211 -----GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ E L LF +M +P+E +VS+L+AC HLGAL+LG+ + +N
Sbjct: 346 GYLRMNRFKEVLTLFRDMQMSNV-KPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIK 404
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+ + +LIDMY KCG +EK +F M K + T++ MI GLA +G G+EAL++FS M
Sbjct: 405 NDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYM 464
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
L + PD++ Y+GV+ AC+H GLV +G F M +++ I P + HYGC+VDL+GRAG
Sbjct: 465 LEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGH 524
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L EALE+I +MP++ N +VW SLL A +VH N+++ E+AA + ++ + + YVLL N+
Sbjct: 525 LKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNI 584
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
YA ++W ++ +R M +G+ + PG SL+E+ VY+FV+ D+SHP IY + M
Sbjct: 585 YAACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENM 644
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+ L GYSPD S+V DV E++K L HS+KLAIA+ALI +G IRI +NLRMC
Sbjct: 645 KQDLSNAGYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMC 704
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
DCH ++S +Y RE+IVRD+ RFH F+ G
Sbjct: 705 VDCHHMAMVVSKVYNRELIVRDKTRFHHFRHG 736
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 172/353 (48%), Gaps = 34/353 (9%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+++L+TC + E ++H+ +K G N + ++ C G + YA +F +I +P
Sbjct: 39 ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQP 98
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
F +NT+I+G+ + E + LY M ++PD FTFP L K K ALK G +
Sbjct: 99 SVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLL 158
Query: 155 GHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H GF + +LFVQ I+++ C V +A IF D V +W+ +++ + +
Sbjct: 159 NHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRY 218
Query: 214 SECLKLFGEMNNE-KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVE 271
E +LF EM + +C P LV +LSAC+ L L GKC + I+ I N+I+E
Sbjct: 219 EESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILE 278
Query: 272 TSLIDMYVKCGCLEKGLCLFRMM---------------ADKCQL---------------- 300
+LIDM+ CG ++ +F M A+ C++
Sbjct: 279 NALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYV 338
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+++ MI G + KE L++F +M ++PD+ V +L+AC+H G + G
Sbjct: 339 SWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELG 391
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 148/349 (42%), Gaps = 16/349 (4%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECD-LFVQNSLINMYGK-CEKVEFASAIFKQMD 193
+L + C + E QIH K G + LF+ +I K V +A +F ++
Sbjct: 40 SLLETC---NTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIP 96
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
Q SV W+ +I ++ + L+ M +P+ +L T AL GK
Sbjct: 97 QPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNI-KPDGFTFPFLLKGFTKDMALKYGK 155
Query: 254 CT-HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+ ++I N+ V+ I ++ CG + +F M +T++V++SG
Sbjct: 156 VLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRF 215
Query: 313 GQGKEALSIFSEMLR--EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
+ +E+ +F EM + E + P+ V V +LSACS + G +++ E + P +
Sbjct: 216 KRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNL 275
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLF 429
++D+ G + A + M + DV+ W S+++ N ++A K
Sbjct: 276 ILENALIDMFASCGEMDAARGVFDEM--KTRDVISWTSIVTG---FANTCRIDLARKYFD 330
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
Q+ + + + Y R R+ +V + +M + + F++V +
Sbjct: 331 QMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNV-KPDEFTMVSI 378
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 317/557 (56%), Gaps = 4/557 (0%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VHA K G + + L++ A G M+ A +F +++ P +N LI G+
Sbjct: 243 VHAFGEKCGLAQHEHVVTGLISLYA--KCGDMECARHLFDRMEGPDLVTYNALISGYSIN 300
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
++ L+ E+ G+ P + T AL + +H HV K G + + V
Sbjct: 301 GMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVS 360
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
+L +Y + ++ A F M +K++ SW+A+I+ +A NGL + LF +M
Sbjct: 361 TALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNV- 419
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
RP + S LSAC LGAL LGK H + LNV V T+LIDMYVKCG + + C
Sbjct: 420 RPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARC 479
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M +K ++++VMISG +HGQG EAL ++ +M+ L P ++ VL ACSH GL
Sbjct: 480 IFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGL 539
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ-NDVVWRSL 408
V EG F M +Y I P ++H C+VDL+GRAG L EA ELI P +W +L
Sbjct: 540 VKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGAL 599
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A VH + ++ ++A++ LF++ + YVLLSN+Y +++ + A +R E S+ L
Sbjct: 600 LGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLV 659
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
++PG +L+E+ + + F++ DR+HP D IY + ++ ++ GY PD L DV+E+
Sbjct: 660 KTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEE 719
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK +K HS+KLAIAF L++ G+ IRI +NLR+C DCH TK+IS + +R I+VRD
Sbjct: 720 EKEHMVKVHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDA 779
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+DG CSC DYW
Sbjct: 780 SRFHHFRDGVCSCGDYW 796
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 193/411 (46%), Gaps = 29/411 (7%)
Query: 47 FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
+ +HA + GF + F AS L G + A +F + P +NTL+ G
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKLYFTLSRG--NDARKVFDAVPSPDTVLWNTLLAG- 198
Query: 107 VKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ EAL + M G V PD+ T ++ A A++ G +H K G
Sbjct: 199 ---LSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQH 255
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
V LI++Y KC +E A +F +M+ + +++A+I+ ++ NG+ ++LF E+
Sbjct: 256 EHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVG 315
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
RP S LV+++ + G L C H +++ N V T+L +Y + ++
Sbjct: 316 MG-LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
F M +K +++ MISG A +G + A+++F +M + P+ + LSAC+
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434
Query: 346 HAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
G ++ G ++ ++++L ++ ++D+ + G + EA + SM +
Sbjct: 435 QLGALSLGKWVHKIIANEKLELNVYVMT------ALIDMYVKCGSIAEARCIFDSMD-NK 487
Query: 401 NDVVWRSLLSASKVHHNLEIGEIA-AKNLFQ--INSH-HPSDYVLLSNMYA 447
N V W ++S +H G+ A A L++ +++H HP+ LS +YA
Sbjct: 488 NVVSWNVMISGYGLH-----GQGAEALKLYKDMMDAHLHPTSSTFLSVLYA 533
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/627 (35%), Positives = 334/627 (53%), Gaps = 42/627 (6%)
Query: 15 QPEEPPK----GPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV 70
QP P G + + L +L C L ++HA ++ G + L
Sbjct: 15 QPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQ 74
Query: 71 ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
A S +D ++ R +P + + I AL L +EM RG+ P
Sbjct: 75 RAYAASD--RLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPT 132
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
+ T + AC L G +H + FK+ D +V +L+ MY + + A A+F
Sbjct: 133 SHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFD 189
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK--CWR------------------ 230
+M V +A++ +A G + +LF M ++ CW
Sbjct: 190 EMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRL 249
Query: 231 ----------PEESILVSVLSACTHLGALDLGKCTHGSLIRNIS--ALNVIVETSLIDMY 278
P+E ++ LSA LG + G+ H S ++N LN V T+LIDMY
Sbjct: 250 FRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLH-SYVKNSRRVQLNARVGTALIDMY 308
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG LE + +F + DK + ++ MI+G AMHG ++AL +FS++ +GL P D+ ++
Sbjct: 309 CKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFI 368
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
G+L+ACSH+GLV+EG F M+ EY IVP ++HYGC+VDL+GRAG++ EA L+QSM I
Sbjct: 369 GLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTI 428
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ V+W SLL+A ++H N+ +G+ A L + Y+LLSN+YA W +VA++
Sbjct: 429 APDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARV 488
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R+ M + G+ + PG S +EV RKVY+FV+ D SHP D IY M+ +M +K +G+ P
Sbjct: 489 RSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQT 548
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
VL D+DE K + L HS+KLA+AF LI + G I+I +NLR C DCH KLIS I
Sbjct: 549 ELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKI 608
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+I+ RDR RFH F DG+C+C DYW
Sbjct: 609 TGRKIVFRDRNRFHHFVDGSCTCGDYW 635
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/627 (35%), Positives = 334/627 (53%), Gaps = 42/627 (6%)
Query: 15 QPEEPPK----GPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV 70
QP P G + + L +L C L ++HA ++ G + L
Sbjct: 14 QPVLPSSSASTGGQQHGVLTADRVAGLLTGCATLRRTGELHAAAVRAGVDGDRAVGFRLQ 73
Query: 71 ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
A S +D ++ R +P + + I AL L +EM RG+ P
Sbjct: 74 RAYAASD--RLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPT 131
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
+ T + AC L G +H + FK+ D +V +L+ MY + + A A+F
Sbjct: 132 SHTLSSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFD 188
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK--CWR------------------ 230
+M V +A++ +A G + +LF M ++ CW
Sbjct: 189 EMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRL 248
Query: 231 ----------PEESILVSVLSACTHLGALDLGKCTHGSLIRNIS--ALNVIVETSLIDMY 278
P+E ++ LSA LG + G+ H S ++N LN V T+LIDMY
Sbjct: 249 FRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLH-SYVKNSRRVQLNARVGTALIDMY 307
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG LE + +F + DK + ++ MI+G AMHG ++AL +FS++ +GL P D+ ++
Sbjct: 308 CKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFI 367
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
G+L+ACSH+GLV+EG F M+ EY IVP ++HYGC+VDL+GRAG++ EA L+QSM I
Sbjct: 368 GLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTI 427
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ V+W SLL+A ++H N+ +G+ A L + Y+LLSN+YA W +VA++
Sbjct: 428 APDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARV 487
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R+ M + G+ + PG S +EV RKVY+FV+ D SHP D IY M+ +M +K +G+ P
Sbjct: 488 RSMMKASGIQKEPGCSAIEVGRKVYEFVAGDMSHPRTDEIYAMLEKMNGIVKEQGHVPQT 547
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
VL D+DE K + L HS+KLA+AF LI + G I+I +NLR C DCH KLIS I
Sbjct: 548 ELVLHDLDEVTKEKALAVHSEKLAVAFGLISTAPGETIKIVKNLRACADCHAVLKLISKI 607
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+I+ RDR RFH F DG+C+C DYW
Sbjct: 608 TGRKIVFRDRNRFHHFVDGSCTCGDYW 634
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 350/637 (54%), Gaps = 66/637 (10%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
CL++L +CKNL ++H +K+G + + L+ CA+S ++ YA + E
Sbjct: 8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKL-------- 144
P AF FNTL+RG+ + E ++ ++ EM +G V PD+F+F + KA
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 145 ---QALKEGMQIH--------------------GHVFKVGFECDLFVQNSLINM------ 175
QALK G++ H VF + +L N++I
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 176 -------------------------YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Y K ++E A IF +M + SWS +I A N
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G ++E F E+ P E L VLSAC+ G+ + GK HG + + + V V
Sbjct: 248 GSFNESFLYFRELQRAG-MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADK-CQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+LIDMY +CG + +F M +K C ++++ MI+GLAMHGQG+EA+ +F+EM G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PD + ++ +L ACSHAGL+ EG F MK Y I P ++HYGC+VDL GR+G L +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ I MPI +VWR+LL A H N+E+ E + L +++ ++ D VLLSN YA A
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W DVA IR M + + ++ +SLVEV + +YKF + ++ +E + ++ +L
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 510 KFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
K E GY+P+++ L DV+E+EK +++ HS+KLA+AFAL LS+G+ IRI +NLR+C DC
Sbjct: 547 KDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H KL S +Y EI+VRDR RFH FKDG+CSCRDYW
Sbjct: 607 HAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 221/614 (35%), Positives = 339/614 (55%), Gaps = 55/614 (8%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWG----FFWNPFCASNLVATCALSHWGSMDYACSI 87
LT+LK C + L+E K+VHAH+ G + N ++ A C GS+ A +
Sbjct: 123 LTLLKFCLKQRALKEGKQVHAHIKTSGSIGLYISNRLL--DMYAKC-----GSLVDAEKV 175
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK---- 143
F ++ +N +I G+VK FE+A L+++M R DNF++ A+ C +
Sbjct: 176 FDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRP 231
Query: 144 --------------------------------LQALKEGMQIHGHVFKVGFECDLFVQNS 171
+ +L G +IHGH+ ++G + D V S
Sbjct: 232 EEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCS 291
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L++MYGKC +E A IF +M+++ V SW+ +I + NG E LF + N P
Sbjct: 292 LLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIM-P 350
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ VL+AC L A DLGK H ++R ++L+ MY KCG +E +F
Sbjct: 351 NDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVF 410
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
++ +++ ++ G A HGQ +AL F +L+ G +PD + ++GVLSAC+HAGLV+
Sbjct: 411 EILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVD 470
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+GL F +K ++ + T+ HY C++DL+ RAG EA +I MPI+ + +W +LL
Sbjct: 471 KGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGG 530
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
++H NLE+ + AAK+LF+I +P+ YV L+N+YA A + A IR M S+G+ + P
Sbjct: 531 CRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKP 590
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G S +E+ R+V+ F D SHP I E + ++ ++K GY PD + VL DV+ ++K
Sbjct: 591 GMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKE 650
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
E L HS+KLA+AF +I G+PI++ +NLR C DCH K IS I R+IIVRD RF
Sbjct: 651 ENLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRF 710
Query: 592 HRFKDGTCSCRDYW 605
H F+ G+CSC+DYW
Sbjct: 711 HCFEGGSCSCKDYW 724
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 56/337 (16%)
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
++ R +P + L K C K +ALKEG Q+H H+ K L++ N L++MY KC
Sbjct: 109 QLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRLLDMYAKCG 167
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK--CW--------- 229
+ A +F +M + + SW+ +I+ + G + + LF +M N W
Sbjct: 168 SLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQ 227
Query: 230 --RPEESILVSVL---------SACT---------HLGALDLGKCTHGSLIRNISALNVI 269
RPEE++ + L + CT + +L +GK HG ++R + +
Sbjct: 228 HNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEV 287
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V SL+DMY KCG +E+ +F M ++ ++++ MI +G+ +E ++F ++
Sbjct: 288 VWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSN 347
Query: 330 LEPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ P+D + GVL+AC+ HA +V G F +V
Sbjct: 348 IMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAA------------SALVH 395
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + G + A + + +P Q + W SLL H
Sbjct: 396 MYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQH 431
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/573 (38%), Positives = 328/573 (57%), Gaps = 42/573 (7%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C +NL +H VLK G +N F + L+A G + A +F ++
Sbjct: 125 VLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAM--YGKCGCLFEARRVFDEMIW 182
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+++ G+ + F++AL + EM + G +PD T +L A A +
Sbjct: 183 KDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS------- 235
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
E V + IF +++K++ SW+ +I + N L
Sbjct: 236 --------------------------ENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLP 269
Query: 214 SECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ + L+ +M EKC P+ SVL AC L AL LG+ H + + N+++E
Sbjct: 270 TQAVDLYLQM--EKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLEN 327
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SLIDMY +CGCL+ +F M + +++ +IS M GQG A+++F+EML G P
Sbjct: 328 SLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAP 387
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +V +LSACSH+GL++EG + F +M +YRI P ++HY C+VDL+GRAG + EA +
Sbjct: 388 DSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNI 447
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ MPI+ N+ VW +LLS+ +V N++IG +AA NL Q+ YVLLSN+YA+A RW
Sbjct: 448 IKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRW 507
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+V +IR+ M K + ++PG S VE+ +V+ F++ D SHP IYE + + ++K
Sbjct: 508 KEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKEL 567
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P+ L DV+E++K L HS+KLAI FAL++ +Q IRI +NLR+C DCH
Sbjct: 568 GYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLN-TQEYQIRITKNLRVCGDCHIAA 626
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I EREIIVRD RFH FKDG CSC DYW
Sbjct: 627 KLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 48/374 (12%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+++ KK+H + NP L+ + A G +F ++ + +N +
Sbjct: 33 DIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAAC--GEPGLTRKVFDEMSDRNVVFYNVM 90
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
IR +V +++ L ++ EM G PDN+T+P + KAC+ + L+ G+ IHG V KVG
Sbjct: 91 IRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGL 150
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ +LFV N LI MYGKC + A +F +M K V SW++++A +A N + + L++ E
Sbjct: 151 DFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICRE 210
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M + +P+ + S++ A + N S+ NV +YV
Sbjct: 211 MEDYG-QKPDGCTMASLMPA-----------------VANTSSENV--------LYV--- 241
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
EK +F + K ++++VMI + +A+ ++ +M + +EPD + + VL
Sbjct: 242 --EK---IFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLP 296
Query: 343 ACSHAGLVNEGLLCFDRMKLEY----RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
AC + L R EY ++ P + ++D+ R G L +A + M
Sbjct: 297 ACG-----DLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKF 351
Query: 399 QQNDVV-WRSLLSA 411
+ DV W SL+SA
Sbjct: 352 R--DVASWTSLISA 363
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/582 (36%), Positives = 321/582 (55%), Gaps = 6/582 (1%)
Query: 27 LRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+RL T+L ++E K + LK GF ++ + + L++ S +D
Sbjct: 200 VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLIS--VFSKCEDVDT 257
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F I +P +N LI GF E E A+ + E+ G + T L +
Sbjct: 258 ARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSP 317
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L I G K G V +L +Y + +++ A +F + +K+VA+W+A+
Sbjct: 318 FGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAM 377
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I+ +A +GL + LF EM + + P + S+LSAC LGAL GK H +
Sbjct: 378 ISGYAQSGLTEMAISLFQEMMTTE-FTPNPVTITSILSACAQLGALSFGKSVHQLIKSKN 436
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N+ V T+LIDMY KCG + + LF + ++K +T++ MI G +HG G EAL +F+
Sbjct: 437 LEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFN 496
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EML G +P V ++ VL ACSHAGLV EG F M +YRI P +HY C+VD++GRA
Sbjct: 497 EMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRA 556
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L +ALE I+ MP++ VW +LL A +H + + +A++ LF+++ + YVLLS
Sbjct: 557 GQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLS 616
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+Y+ + + A +R + + L+++PG +L+EV + FV DRSH +IY +
Sbjct: 617 NIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLE 676
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +++ GY + L DV+E+EK HS+KLAIAF LI G+ IRI +NLR
Sbjct: 677 ELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLR 736
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH TK IS I ER I+VRD RFH FKDG CSC DYW
Sbjct: 737 VCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 198/405 (48%), Gaps = 20/405 (4%)
Query: 50 VHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+HAH + GF N F AS LV C S + YA +F ++ + +NT+I G V+
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSR---VAYARKVFDKMPDRDTVLWNTMITGLVR 181
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+++++ ++ +M +GV D+ T + A A++Q +K GM I K+GF D +V
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
LI+++ KCE V+ A +F + + + S++A+I+ + NG +K F E+
Sbjct: 242 LTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG- 300
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
R S +V ++ + G L L C G +++ + L V T+L +Y + ++
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLAR 360
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
LF ++K ++ MISG A G + A+S+F EM+ P+ V +LSAC+ G
Sbjct: 361 QLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLG 420
Query: 349 LVNEGLLCFDRMK---LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
++ G +K LE I + ++D+ + G + EA +L + ++N V W
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVST----ALIDMYAKCGNISEASQLFD-LTSEKNTVTW 475
Query: 406 RSLLSASKVHHNLEIGEIAAKNLFQINSH---HPSDYVLLSNMYA 447
+++ +H G+ A K LF H PS LS +YA
Sbjct: 476 NTMIFGYGLH---GYGDEALK-LFNEMLHLGFQPSSVTFLSVLYA 516
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 7/312 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I K C + HA +++ G+ + + L T L G+ +A ++F + +P
Sbjct: 15 ISKAC-TFPHLAETHAQLIRNGYQHDLATVTKL--TQKLFDVGATRHARALFFSVPKPDI 71
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F FN LI+GF + F + + + PDNFT+ A GM +H H
Sbjct: 72 FLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAH 128
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
GF+ +LFV ++L+++Y K +V +A +F +M + W+ +I N + +
Sbjct: 129 AVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDS 188
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+++F +M + R + + + +VL A + + +G ++ + V T LI
Sbjct: 189 VQVFKDMVAQGV-RLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLIS 247
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
++ KC ++ LF M+ ++Y+ +ISG + +G+ + A+ F E+L G
Sbjct: 248 VFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSST 307
Query: 337 YVGVLSACSHAG 348
VG++ S G
Sbjct: 308 MVGLIPVSSPFG 319
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 91/230 (39%), Gaps = 8/230 (3%)
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
RG N + KAC + H + + G++ DL L
Sbjct: 3 RGDISRNTLLALISKACT----FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRH 58
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A A+F + + + ++ +I + + S + + + P+ +SA
Sbjct: 59 ARALFFSVPKPDIFLFNVLIKGFSFSPDASS-ISFYTHLLKNTTLSPDNFTYAFAISASP 117
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
+LG C H + + N+ V ++L+D+Y K + +F M D+ + ++
Sbjct: 118 DD---NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNT 174
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
MI+GL + +++ +F +M+ +G+ D VL A + V G+
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGM 224
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/541 (37%), Positives = 325/541 (60%), Gaps = 33/541 (6%)
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+ +LI + + EA+ + M G+ PD T A+ ACAKL+ L+ G +H
Sbjct: 205 ISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLL 264
Query: 157 VFKVGFECDLFVQNSLINMYGKCEK--------------------------------VEF 184
V + G + +LI+MY KC V+
Sbjct: 265 VEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDV 324
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A ++F +M+ + + ++++++ + +G E L LF M R + +V++L+AC
Sbjct: 325 ARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD-LRVDNFTVVNLLTACA 383
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
LGAL G+ H + + + ++ + T+L+DMY+KCG +++ +F+ M + T++
Sbjct: 384 SLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTA 443
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MI+GLA +G GK AL F +M +G +P+ V Y+ VL+ACSH+ L+NEG L FD M++ Y
Sbjct: 444 MIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILY 503
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA 424
I P ++HYGC++DL+GR+G+L EA++L+++MPIQ N V+W S+LSA +VH ++++ + A
Sbjct: 504 NIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCA 563
Query: 425 AKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYK 484
A++L ++ YV L N+Y +++W + +KIR M + + ++ G+S + VA +V+K
Sbjct: 564 AEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSITVAGQVHK 623
Query: 485 FVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIA 544
FV D+SHP I M+ ++ +LK GYSP SQ+ DVDE+EK + L HS+KLAIA
Sbjct: 624 FVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVDEEEKEQALLAHSEKLAIA 683
Query: 545 FALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
F LI+L+ P+ I +NLR+C DCH+ KLIS ++ REIIVRDR RFH F++GTCSC D+
Sbjct: 684 FGLINLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFREGTCSCNDF 743
Query: 605 W 605
W
Sbjct: 744 W 744
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 144/264 (54%), Gaps = 8/264 (3%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A S+F +++ FN+++ G++ + EAL L+ M + DNFT L
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
ACA L AL++G +H + + E D+++ +L++MY KC +V+ A+ +F++M ++ V
Sbjct: 380 TACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVH 439
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A+IA A NG+ L+ F +M + ++P ++VL+AC+H L+ G+
Sbjct: 440 TWTAMIAGLAFNGMGKAALEHFYQMRCDG-FQPNSVSYIAVLTACSHSCLLNEGRLYFDE 498
Query: 259 LIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQG 315
+ R + ++ +E +ID+ + G L++ + L + M + + ++ ++S +H
Sbjct: 499 M-RILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHI 557
Query: 316 KEALSIFSEMLREGLEPD-DVVYV 338
A +L+ LEPD D VYV
Sbjct: 558 DLAQCAAEHLLK--LEPDEDGVYV 579
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 194/465 (41%), Gaps = 81/465 (17%)
Query: 40 TCKNLEEFKKVHAHVLKWG-FFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPG 95
T + + + ++HA + G +P A +L+ C H + YA +F ++ P
Sbjct: 8 TPRTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRM-PPS 66
Query: 96 AFDFNTLIRGFVKE-VEFEEALFLYNEMFERGVEPDNFTFPALFK---ACAKLQALKEGM 151
F F+T +R + + L+ M GV PD FTF LFK + ++ +L
Sbjct: 67 TFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCT 126
Query: 152 QIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+H + FV NSLI+MY + A F ++ K +W+ +I+ A
Sbjct: 127 MLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKM 186
Query: 211 GL------------------WSECLKLFGEMNNEK----CWR--------PEESILVSVL 240
G+ W+ + + N + C++ P+E +++VL
Sbjct: 187 GMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVL 246
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG------------------ 282
SAC L L+LG+ H + + + +LIDMY KCG
Sbjct: 247 SACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRP 306
Query: 283 ----CLEKGLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ G C LF M + +T++ M++G GQ +EAL +F M R
Sbjct: 307 QSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRH 366
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRAGMLG 387
L D+ V +L+AC+ G + +G +E R+V + G ++D+ + G +
Sbjct: 367 DLRVDNFTVVNLLTACASLGALQQGRAL--HACIEQRLVEADIYLGTALLDMYMKCGRVD 424
Query: 388 EALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQI 431
EA + Q M + DV W ++++ + +G+ A ++ +Q+
Sbjct: 425 EATIVFQRM--GKRDVHTWTAMIAGLAFN---GMGKAALEHFYQM 464
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 328/582 (56%), Gaps = 24/582 (4%)
Query: 41 CKNLEEFKKVHAHV-LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG---- 95
C +EE KV + K WN S G +++A S+F ++ E
Sbjct: 412 CGKMEEANKVFQRMKFKDVVSWNAM-------VTGYSQAGRLEHALSLFERMTEENIELD 464
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +I G+ + + EAL ++ +M + G P+ T +L AC + AL G + H
Sbjct: 465 VVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHC 524
Query: 156 HVFKVGFECD--------LFVQNSLINMYGKCEKVEFASAIFKQMDQKS--VASWSAIIA 205
+ K D L V N LI+MY KC+ E A +F + K V +W+ +I
Sbjct: 525 YAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIG 584
Query: 206 AHASNGLWSECLKLF-GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI- 263
+A +G + L+LF G +K +P + L L AC L AL G+ H ++RN
Sbjct: 585 GYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFY 644
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++ + V LIDMY K G ++ +F M + ++++ +++G MHG+G++AL +F
Sbjct: 645 GSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFD 704
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EM + L PD + ++ VL ACSH+G+V+ G+ F+RM ++ + P +HY C+VDL GRA
Sbjct: 705 EMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRA 764
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G LGEA++LI MP++ VVW +LLSA ++H N+E+GE AA L ++ S + Y LLS
Sbjct: 765 GRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLS 824
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA A+RW DVA+IR M G+ + PG S ++ + V F DRSHP IYE +
Sbjct: 825 NIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLA 884
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ ++K GY P S L DVD++EK + L HS+KLA+A+ ++ L +PIRI +NLR
Sbjct: 885 DLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITKNLR 944
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH+ IS I E EII+RD RFH FK+G+CSC+ YW
Sbjct: 945 ICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 172/331 (51%), Gaps = 9/331 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI--D 92
+T LK C +L K +H + G ++ A+NL+ T S+ S YA + ++
Sbjct: 165 ITALKECNSLAHAKLLHQQSIMQGLLFH--LATNLIGTYIASN--STAYAILLLERLPPS 220
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F +N LIR + + LY +M G PD++TFP +FKACA L +L G
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV---ASWSAIIAAHAS 209
+H V + GF ++FV N++++MYGKC + A +F + + + SW+++++A+
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMW 340
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L LF +M P+ LV++L AC L A G+ HG IR+ +V
Sbjct: 341 ASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVF 400
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +++DMY KCG +E+ +F+ M K ++++ M++G + G+ + ALS+F M E
Sbjct: 401 VGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEEN 460
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+E D V + V++ + G E L F +M
Sbjct: 461 IELDVVTWTAVITGYAQRGQGCEALDVFRQM 491
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/610 (34%), Positives = 333/610 (54%), Gaps = 44/610 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQI 91
++ T + L E +K+HA ++ GF + A+ N+ C SH A +F ++
Sbjct: 214 ISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSH-----EAREVFDKM 268
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N +I +V +F EAL LY ++ G + TF ++ AC+ ++AL +G
Sbjct: 269 KKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR 328
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H H+ + G + ++ V +L+NMY KC +E A +F M + +WS +I A+ASNG
Sbjct: 329 LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNG 388
Query: 212 L---------------------WSE-------------CLKLFGEMNNEKCWRPEESILV 237
W+ +K+F EM +P+ +
Sbjct: 389 YGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFI 448
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VL AC LG L K H + + NV+V +LI+MY +CG LE+ LF +K
Sbjct: 449 AVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEK 508
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ M++ + +G+ EAL +F EM EG++PDDV Y +L C+H G + +G F
Sbjct: 509 TVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYF 568
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M + + PT H+ +VDL+GR+G L +A EL++SMP + + V W + L+A ++H
Sbjct: 569 TDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGK 628
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
LE+GE AA+ +++++ + Y+ +SN+YA W VA +R +M +GL + PG S +E
Sbjct: 629 LELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIE 688
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V K+++F S + HP D I E + ++ ++ GY PD VL DV E EK L H
Sbjct: 689 VDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYH 748
Query: 538 SQKLAIAFALI-HLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF-K 595
S+K+AIAF L+ G PIR+ +NLR+C+DCHT TK I+ I R+IIVRD RFHRF
Sbjct: 749 SEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSS 808
Query: 596 DGTCSCRDYW 605
DG CSC DYW
Sbjct: 809 DGKCSCGDYW 818
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 227/498 (45%), Gaps = 74/498 (14%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+++L C +L + +++H V G A+ LV A +GS+ A +F+ +
Sbjct: 114 VSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYA--RFGSVGDAKRMFQSLQTR 171
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N +I + ++ AL ++ EM + V+P++ T+ + + + L EG +IH
Sbjct: 172 DETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIH 230
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ GF+ DL V +LINMYGKC A +F +M ++ + SW+ +I + NG +
Sbjct: 231 AEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFH 290
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+L+ +++ E ++ ++ VS+L AC+ + AL G+ H ++ V V T+L
Sbjct: 291 EALELYQKLDMEG-FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATAL 349
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE----------------- 317
++MY KCG LE+ +F M ++ + +S +I A +G GK+
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409
Query: 318 -----------------ALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
A+ IF EM GL+PD V ++ VL AC+ G ++E +
Sbjct: 410 SWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 360 M---KLEYRIV---------------------------PTVQHYGCVVDLMGRAGMLGEA 389
+ +LE +V TV + +V + G EA
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 390 LELIQSMP---IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS--DYVLLSN 444
L+L Q M ++ +DV + S+L +LE G ++ ++++ P+ + + +
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 445 MYARAQRWYDVAKIRTEM 462
+ R+ R +D ++ M
Sbjct: 590 LLGRSGRLFDAKELLESM 607
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 192/386 (49%), Gaps = 22/386 (5%)
Query: 35 LTIL---KTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIF 88
LT+L +C ++ E + +H + + F +V +S +G D A S+F
Sbjct: 11 LTVLCSCSSCGDVVEGRALHERIR-----CSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 89 RQID--EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+D + +N +I + + EAL LY M +G+ D+ TF ++ AC+ +
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---S 122
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L +G +IH VF G + + N+L+ MY + V A +F+ + + SW+A+I A
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 207 HASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
H+ +G WS L++F EM KC +P + ++V+S + L G+ H ++ N
Sbjct: 183 HSQSGDWSGALRIFKEM---KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+++V T+LI+MY KCG + +F M + ++++VMI ++G EAL ++ ++
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
EG + +V +L ACS + +G L + LE + V +V++ + G
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI-LERGLDSEVAVATALVNMYAKCGS 358
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA 411
L EA ++ +M ++ V W +L+ A
Sbjct: 359 LEEARKVFNAMK-NRDAVAWSTLIGA 383
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 23/291 (7%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+PDN TF + +C+ + EG +H + FE D V N+LI+MYGKC+ + A +
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 188 IFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F+ MD Q++V SW+A+IAA+A NG +E L L+ MN + + VSVL AC+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLG-TDHVTFVSVLGACSS 122
Query: 246 LGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
L G+ H + S L+ + +L+ MY + G + +F+ + + + +++
Sbjct: 123 LAQ---GREIHNRVF--YSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+I + G AL IF EM + ++P+ Y+ V+S S ++ EG K+
Sbjct: 178 AVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEG------RKIH 230
Query: 364 YRIVPTVQHYGCVV-----DLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
IV VV ++ G+ G EA E+ M +++ V W ++
Sbjct: 231 AEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI 280
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/640 (34%), Positives = 339/640 (52%), Gaps = 66/640 (10%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E+ +++L C +L+ K++HA + K G +P L+ CA++ ++ YA +F
Sbjct: 2 EEAWVSLLSKCSSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHH 61
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKE 149
P F NTLIR +L + ++ + + PD+FTF KA A + L+
Sbjct: 62 FPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRP 121
Query: 150 GMQIH---------GHVF-------------------------------------KVGFE 163
G+Q+H H+F F
Sbjct: 122 GIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFR 181
Query: 164 C----------------DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
C +L N ++ Y K ++ A +F +M + SWS +I
Sbjct: 182 CGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGF 241
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A NG + E F E+ E+ R E L VLSAC GA + GK HG + +
Sbjct: 242 AHNGCFDEAFGFFRELLREEI-RTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYV 300
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFR-MMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V +LID Y KCG + +F+ M + ++++ +I+GLAMHG G+EA+ +F EM
Sbjct: 301 GSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEME 360
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ PD + ++ +L ACSH+GLV EG F +MK Y I P ++HYGC+VDL GRA L
Sbjct: 361 ESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARL 420
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
+A E I MP+ N ++WR+LL A +H N+E+ E+ L +++ + D+VLLSN+Y
Sbjct: 421 QKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVY 480
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A A +W DV+ IR M + ++PG+S++E+ + +Y FV+ ++ + + +E + ++
Sbjct: 481 AVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIM 540
Query: 507 WQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+L+ E GY+P + VL D++E+EK + + HS+KLA AF + L +G +RI +NLR+C
Sbjct: 541 LRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFGIAKLPKGRILRIVKNLRVC 600
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCHT KLIS +Y+ EIIVRDR RFH FKDG CSCRDYW
Sbjct: 601 GDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/608 (35%), Positives = 340/608 (55%), Gaps = 21/608 (3%)
Query: 3 RTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGF 59
R ++LH +L +G + N Q+ T+L C + + E ++VHAH++K +
Sbjct: 43 REALLHMAL---------RGLDTNF----QDYNTVLNECLRKRAIREGQRVHAHMIKTHY 89
Query: 60 FWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
+ + L+ S+ A +F + E + +I + + +AL L+
Sbjct: 90 LPCVYLRTRLIVFYV--KCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLF 147
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
+M G EP+ FTF + +C G QIH H+ K+ +E ++V +SL++MY K
Sbjct: 148 VQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKD 207
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
K+ A IF+ + ++ V S +AII+ +A GL E L+LF + E + SV
Sbjct: 208 GKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREG-MQSNYVTYTSV 266
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L+A + L ALD GK H L+R+ V+++ SLIDMY KCG L +F + ++
Sbjct: 267 LTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTV 326
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGL-LCF 357
++++ M+ G + HG+G+E L +F+ M+ E ++PD V + VLS CSH GL ++G+ + +
Sbjct: 327 ISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFY 386
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
D + + P +HYGCVVD++GRAG + A E ++ MP + + +W LL A VH N
Sbjct: 387 DMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSN 446
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
L+IGE L QI + +YV+LSN+YA A RW DV +R M K + + PG S +E
Sbjct: 447 LDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIE 506
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
+ + ++ F + D SHP + + + ++ + K GY PD+S VL DVDE++K + L H
Sbjct: 507 LDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSH 566
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLA+ F LI + PIR+ +NLR+C DCH + K S IY RE+ +RD+ RFHR G
Sbjct: 567 SEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGG 626
Query: 598 TCSCRDYW 605
CSC DYW
Sbjct: 627 KCSCGDYW 634
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 156/309 (50%), Gaps = 6/309 (1%)
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ + EAL M RG++ + + + C + +A++EG ++H H+ K + +
Sbjct: 37 IHDTRLREALL---HMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCV 93
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+++ LI Y KC+ + A +F M +++V SW+A+I+A++ G S+ L LF +M
Sbjct: 94 YLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRS 153
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
P E +VL++C LG+ H +I+ +V V +SL+DMY K G + +
Sbjct: 154 GT-EPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHE 212
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F+ + ++ ++ + +ISG A G +EAL +F + REG++ + V Y VL+A S
Sbjct: 213 ARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSG 272
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
++ G + + L + V ++D+ + G L A + ++ ++ + W
Sbjct: 273 LAALDHGKQVHNHL-LRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLH-ERTVISWN 330
Query: 407 SLLSASKVH 415
++L H
Sbjct: 331 AMLVGYSKH 339
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/557 (38%), Positives = 324/557 (58%), Gaps = 36/557 (6%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++HA V++ G N F + L++ G + AC + Q+ +N+L+ G +
Sbjct: 158 QIHAAVVRVGLDLNVFVGNGLISM--YGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCAR 215
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+F++AL + EM G++PD T +L A V
Sbjct: 216 NGQFDDALEVCKEMELLGLKPDAGTMASLLPA---------------------------V 248
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+ + + V F +F ++ KS+ SW+ +IA + +N + +E + +F +M +
Sbjct: 249 TNTCL------DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAV 302
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ + SVL AC L AL LG+ H ++R N+++E +LIDMY KCGCLE
Sbjct: 303 -DPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 361
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M + ++++ MIS M+G+G++A+S+FS M GL PD + +V VLSACSHAG
Sbjct: 362 EVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAG 421
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L++EG F M E +IVP ++H+ C+VDL+GRAG + EA I+ MP++ N+ VW +L
Sbjct: 422 LLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGAL 481
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
LSA +V+ N+ IG +AA LFQ+ YVLLSN+YA+A RW DV +R+ M +KG+
Sbjct: 482 LSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 541
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S E+ +V+ F++ D+SHP IYE + ++K GY P+ L DV+E+
Sbjct: 542 KMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEE 601
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
+K L HS+KLAIAFA+++ + GSPIRI +NLR+C DCH KLIS I REI +RD
Sbjct: 602 DKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDT 661
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F +G CSC DYW
Sbjct: 662 NRFHHFYNGVCSCGDYW 678
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 55/411 (13%)
Query: 9 QSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHV-LKWGFFWNPFCAS 67
Q+L+L+ + PK + N+ L E C IL +++ KK+H+ + + NP
Sbjct: 18 QTLVLSI--QKPKFTQQNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGI 75
Query: 68 NLVATCAL--SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
L+ A+ W + IF +I + FN +IR +V + +AL ++ M
Sbjct: 76 KLMRAYAVCGEPWSTR----HIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGH 131
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G++PD++T+P + KA + + L GMQIH V +VG + ++FV N LI+MYGKC + A
Sbjct: 132 GIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEA 191
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+ QM + V SW++++A A NG + + L++ EM +P+ + S+L A T+
Sbjct: 192 CRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG-LKPDAGTMASLLPAVTN 250
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ + N+S +VK +F +A+K ++++VM
Sbjct: 251 ------------TCLDNVS-------------FVK--------EMFMKLANKSLVSWNVM 277
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY- 364
I+ + EA+ IF +M ++PD + VL AC + L R EY
Sbjct: 278 IAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACG-----DLSALLLGRRIHEYV 332
Query: 365 ---RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
R+ P + ++D+ + G L A E+ M + DVV W S++SA
Sbjct: 333 VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR--DVVSWTSMISA 381
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/643 (34%), Positives = 348/643 (54%), Gaps = 81/643 (12%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS----- 86
L +L+ C K+L E KK+H H LK ++ + L + +C+
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLK---------NTSNADSSVLHKLTRLYLSCNQVVLA 62
Query: 87 --IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F +I P +N +IR + F+ A+ LY+ M GV P+ +T+P + KAC+ L
Sbjct: 63 RRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGL 122
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
A+++G++IH H G E D+FV +L++ Y KC + A +F M + V +W+A+I
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182
Query: 205 AAHASNGLWSE----------------------------CL----KLFGEMN--NEKCWR 230
A + GL + CL K+F M NE W
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWS 242
Query: 231 ----------------------------PEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
P+ + ++ VL AC+HL AL G C+HG LI
Sbjct: 243 AMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 302
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
A + ++ +LIDMY KCG + +F M ++++ MI G +HG G EAL +F
Sbjct: 303 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 362
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
++L GL+PDD+ ++ +LS+CSH+GLV EG L FD M ++ IVP ++H C+VD++GR
Sbjct: 363 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 422
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG++ EA I++MP + + +W +LLSA ++H N+E+GE +K + + ++VLL
Sbjct: 423 AGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLL 482
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+Y+ A RW D A IR GL + PG S +E+ V+ FV D+SH I +
Sbjct: 483 SNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKL 542
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
++ ++K GY + S V +DV+E+EK + L HS+KLAIAF +++L G PI + +NL
Sbjct: 543 EELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNL 602
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCHT K +++I +REI VRD RFH FK+GTC+C D+W
Sbjct: 603 RVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 333/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C K +H+ V+K GF + ++L++ + S G ++ A +F +I +
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS--GRLNDAHKLFDEIPD 174
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ L G+ EA+ L+ +M E GV+PD++ + AC + L G I
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
++ ++ + + FV+ +L+N+Y KC K+E A ++F M +K + +WS +I +ASN
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++LF +M E +P++ +V LS+C LGALDLG+ + R+ N+ + +
Sbjct: 295 KEGIELFLQMLQENL-KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + +G +F+ M +K + + ISGLA +G K + ++F + + G+ PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++G+L C HAGL+ +GL F+ + Y + TV+HYGC+VDL GRAGML +A LI
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MP++ N +VW +LLS ++ + ++ E K L + + +YV LSN+Y+ RW
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWD 533
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ A++R M KG+ + PG+S +E+ KV++F++ D+SHP D IY + + +++ G
Sbjct: 534 EAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P V DV+E+EK L HS+KLA+A LI G IR+ +NLR+C DCH K
Sbjct: 594 FVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMK 653
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I REI+VRD RFH F +G+CSC DYW
Sbjct: 654 LISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 12/378 (3%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K Q+ T++ + K++H ++ + F + L+ + Y+ +F
Sbjct: 12 KVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLF--FRQTKYSYLLFS 69
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
P F +N+LI GFV F E L L+ + + G+ FTFP + KAC + + K
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G+ +H V K GF D+ SL+++Y ++ A +F ++ +SV +W+A+ + + +
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+G E + LF +M E +P+ +V VLSAC H+G LD G+ + N
Sbjct: 190 SGRHREAIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+L+++Y KCG +EK +F M +K +T+S MI G A + KE + +F +ML+E
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 330 LEPDDVVYVGVLSACSHAGLVNE---GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
L+PD VG LS+C+ G ++ G+ DR + + + ++D+ + G +
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDR----HEFLTNLFMANALIDMYAKCGAM 364
Query: 387 GEALELIQSMPIQQNDVV 404
E+ + M ++ D+V
Sbjct: 365 ARGFEVFKEM--KEKDIV 380
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/610 (34%), Positives = 334/610 (54%), Gaps = 44/610 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQI 91
++ T + L E +K+HA ++ GF + A+ N+ C SH A +F ++
Sbjct: 214 ISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSH-----EAREVFDKM 268
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N +I +V+ +F EAL LY ++ G + TF ++ AC+ ++AL +G
Sbjct: 269 KKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGR 328
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H H+ + G + ++ V +L+NMY KC +E A +F M + +WS +I A+ASNG
Sbjct: 329 LVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNG 388
Query: 212 L---------------------WSE-------------CLKLFGEMNNEKCWRPEESILV 237
W+ +K+F EM +P+ +
Sbjct: 389 YGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFI 448
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VL AC LG L K H + + NV+V +LI+MY +CG LE+ LF +K
Sbjct: 449 AVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEK 508
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ M++ + +G+ EAL +F EM EG++PDDV Y +L C+H G + +G F
Sbjct: 509 TVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYF 568
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M + + PT H+ +VDL+GR+G L +A EL++SMP + + V W + L+A ++H
Sbjct: 569 TDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGK 628
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
LE+GE AA+ +++++ + Y+ +SN+YA W VA +R +M +GL + PG S +E
Sbjct: 629 LELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIE 688
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V K+++F S + HP D I E + ++ ++ GY PD VL DV E EK L H
Sbjct: 689 VDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYH 748
Query: 538 SQKLAIAFALI-HLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF-K 595
S+K+AIAF L+ G PIR+ +NLR+C+DCHT TK I+ I R+II+RD RFHRF
Sbjct: 749 SEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSS 808
Query: 596 DGTCSCRDYW 605
DG CSC DYW
Sbjct: 809 DGKCSCGDYW 818
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 226/498 (45%), Gaps = 74/498 (14%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+++L C +L + +++H V G A+ LV A +GS+ A +F+ +
Sbjct: 114 VSVLGACSSLAQGREIHNRVFYSGLDSFQSLANALVTMYA--RFGSVGDAKRMFQSLQTR 171
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N +I + ++ AL ++ EM + ++P++ T+ + + + L EG +IH
Sbjct: 172 DETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIH 230
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ GF+ DL V +LINMYGKC A +F +M ++ + SW+ +I + NG +
Sbjct: 231 AEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFH 290
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+L+ +++ E ++ ++ VS+L AC+ + AL G+ H ++ V V T+L
Sbjct: 291 EALELYQKLDMEG-FKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATAL 349
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE----------------- 317
++MY KCG LE+ +F M ++ + +S +I A +G GK+
Sbjct: 350 VNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTI 409
Query: 318 -----------------ALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
A+ IF EM GL+PD V ++ VL AC+ G ++E +
Sbjct: 410 CWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 360 M---KLEYRIV---------------------------PTVQHYGCVVDLMGRAGMLGEA 389
+ +LE +V TV + +V + G EA
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 390 LELIQSMP---IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS--DYVLLSN 444
L+L Q M ++ +DV + S+L +LE G ++ +++ P+ + + +
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVD 589
Query: 445 MYARAQRWYDVAKIRTEM 462
+ R+ R +D ++ M
Sbjct: 590 LLGRSGRLFDAKELLESM 607
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 22/386 (5%)
Query: 35 LTIL---KTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIF 88
LT+L +C ++ E + +H + + F +V +S +G D A S+F
Sbjct: 11 LTVLCSCSSCGDVAEGRALHERIR-----CSRFERDTMVGNALISMYGKCDSLVDARSVF 65
Query: 89 RQID--EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+D + +N +I + + EAL LY M +G+ D+ TF ++ AC+ +
Sbjct: 66 ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---S 122
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L +G +IH VF G + + N+L+ MY + V A +F+ + + SW+A+I A
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182
Query: 207 HASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
H+ +G WS L++F EM KC +P + ++V+S + L G+ H ++ N
Sbjct: 183 HSQSGDWSGALRIFKEM---KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+++V T+LI+MY KCG + +F M + ++++VMI +G EAL ++ ++
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
EG + +V +L ACS + +G L + LE + V +V++ + G
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHI-LERGLDSEVAVATALVNMYAKCGS 358
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA 411
L EA ++ +M ++ V W +L+ A
Sbjct: 359 LEEARKVFNAMK-NRDAVAWSTLIGA 383
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 23/291 (7%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+PDN TF + +C+ + EG +H + FE D V N+LI+MYGKC+ + A +
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 188 IFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F+ MD Q++V SW+A+IAA+A NG +E L L+ MN + + VSVL AC+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLG-TDHVTFVSVLGACSS 122
Query: 246 LGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
L G+ H + S L+ + +L+ MY + G + +F+ + + + +++
Sbjct: 123 LAQ---GREIHNRVF--YSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWN 177
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+I + G AL IF EM + ++P+ Y+ V+S S ++ EG K+
Sbjct: 178 AVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEG------RKIH 230
Query: 364 YRIVPTVQHYGCVV-----DLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
IV VV ++ G+ G EA E+ M +++ V W ++
Sbjct: 231 AEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMK-KRDMVSWNVMI 280
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/519 (38%), Positives = 299/519 (57%), Gaps = 1/519 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F ++ E +NTL+ G +E EAL +M G PD+FT + A+
Sbjct: 126 VFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECAD 185
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+K G+++HG F+ GF+ D+FV +SLI+MY C + +++ +F + + W++++A
Sbjct: 186 VKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAG 245
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
A NG E L +F M RP S++ C +L +L GK H +I
Sbjct: 246 CAQNGSVEEALGIFRRMLQAGV-RPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFED 304
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV + +SLIDMY KCG + C+F M+ ++++ MI G A+HG +EAL +F M
Sbjct: 305 NVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERME 364
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+P+ + ++ VL+ACSHAGLV++G F M Y IVPT++H+ + D +GRAG L
Sbjct: 365 LGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGEL 424
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
EA I M I+ VW +LL A +VH N + E AK + ++ +V+LSNMY
Sbjct: 425 DEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMY 484
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
+ + RW + A +R M KG+ + P S +EV K++ FV+ DRSHP +D I + ++
Sbjct: 485 SASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFS 544
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
Q+ EG+ P+ V +D++E+ K L GHS+KLAI F +I G+ IR+ +NLR+C
Sbjct: 545 EQMAREGHVPNTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCI 604
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCHT TK IS + +REI+VRD RFH FKDG CSC D+W
Sbjct: 605 DCHTVTKFISKLADREIVVRDANRFHHFKDGNCSCGDFW 643
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 13/223 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
L I C +++ +VH + GF + F S+L+ A C + DY+ +F +
Sbjct: 177 LPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRT-----DYSVKVFDNL 231
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N+L+ G + EEAL ++ M + GV P TF +L C L +L+ G
Sbjct: 232 PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGK 291
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+H +V GFE ++F+ +SLI+MY KC ++ A IF +M V SW+A+I +A +G
Sbjct: 292 QLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHG 351
Query: 212 LWSECLKLFG--EMNNEKCWRPEESILVSVLSACTHLGALDLG 252
E L LF E+ N K P ++VL+AC+H G +D G
Sbjct: 352 PAREALVLFERMELGNAK---PNHITFLAVLTACSHAGLVDKG 391
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 22/265 (8%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNF--TFPALFKACAKLQALKEGMQIHGHVFKV 160
IR E F +A+ L+ M + + PA K+CA L G +H +
Sbjct: 20 IRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRS 79
Query: 161 GFECDLFVQNSLINMY-------------------GKCEKVEFASAIFKQMDQKSVASWS 201
G D F N+L+N+Y G E +F +M ++ V SW+
Sbjct: 80 GAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWN 139
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
++ A G E L +M E +RP+ L +VL + G HG R
Sbjct: 140 TLVLGCAEEGRHHEALGFVRKMCREG-FRPDSFTLSTVLPIFAECADVKRGLEVHGFAFR 198
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
N +V V +SLIDMY C + + +F + + + ++ +++G A +G +EAL I
Sbjct: 199 NGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGI 258
Query: 322 FSEMLREGLEPDDVVYVGVLSACSH 346
F ML+ G+ P V + ++ C +
Sbjct: 259 FRRMLQAGVRPVPVTFSSLIPVCGN 283
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 30/244 (12%)
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI---LVSVLSACTHLGALDLGKCTH 256
W+ I A A+ G + + + LF M P S+ L + L +C LG LG H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRMRASAA--PRSSVPASLPAALKSCAALGLSALGASLH 73
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGC-------------------LEKGLCLFRMMADK 297
IR+ + + +L+++Y K C E +F M ++
Sbjct: 74 ALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER 133
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ ++ G A G+ EAL +M REG PD VL + V GL
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGL--- 190
Query: 358 DRMKLEYR--IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ +R V ++D+ ++++ ++P++ + ++W SLL+ +
Sbjct: 191 EVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDH-ILWNSLLAGCAQN 249
Query: 416 HNLE 419
++E
Sbjct: 250 GSVE 253
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/598 (37%), Positives = 339/598 (56%), Gaps = 18/598 (3%)
Query: 20 PKGPELNLRLKE-----QECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV- 70
P P N RL +IL++C +L +++H +L G + ++ LV
Sbjct: 46 PPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVD 105
Query: 71 --ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
A C G + +A +F + + F +N LIR + +E E A+ LY M E GVE
Sbjct: 106 LYAAC-----GQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVE 160
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
PDNFT+P + KACA L L+ G ++H V + D+FV +++MY KC V+ A A+
Sbjct: 161 PDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAV 220
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F + + W+++IAA+ NG E L L +M P + LVS +SA A
Sbjct: 221 FDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIG-PTIATLVSAVSAAADAAA 279
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L G+ HG R L ++TSL+DMY K G ++ LF + + ++++ MI G
Sbjct: 280 LPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICG 339
Query: 309 LAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
MHG EAL++F++M + + PD++ +VGVLSAC+H G+V E F M Y I
Sbjct: 340 YGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIK 399
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
PTVQHY CV+D++G G EA +LI+ M I+ + +W +LL+ K+H N+E+GE+A +
Sbjct: 400 PTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQK 459
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
L ++ +YV LSN+YA++ +W A++R M ++GL + S +E+ K + F+
Sbjct: 460 LIELEPEDAGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLV 519
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
D SHP D IY + ++E + GY PDI V +VD+DEKR ++ HS++LAIAF L
Sbjct: 520 GDASHPRSDEIYGELERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGL 579
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I G+ + + +NLR+C DCH KLIS I +REII+RD R+H F +G CSC+DYW
Sbjct: 580 ISTPPGTKLLVTKNLRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/608 (36%), Positives = 336/608 (55%), Gaps = 38/608 (6%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
C +L +CK+ + K+VHA ++ G +P + L+ + S + + YA +F +
Sbjct: 4 CDFLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYAHMVFDHFPQ 62
Query: 94 PGAFDFNTLIR--GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P F +NT+I+ F + + + E + P+ ++F FK C + EG
Sbjct: 63 PDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGE 122
Query: 152 QIHGHVFKVGFECDLFVQNSLINMY-------------------------------GKCE 180
Q+ H K+G E +LFV N+LI MY +
Sbjct: 123 QVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLG 182
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
K++ A +F +M +K V SW+ +I+ G + E L +F M K P E L S L
Sbjct: 183 KMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNML-AKGMSPNEYTLASSL 241
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKC 298
+AC +L ALD G+ H + +N +N + LIDMY KCG LE LF +
Sbjct: 242 AACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRK 301
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
++ MI G A+HG+ KEA+ +F +M E + P+ V +V +L+ACSH V EG F+
Sbjct: 302 VWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFE 361
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
M YR+ P ++HYGC+VDL+GRAG L EA E+I SM + + +W +LLSA K+H +
Sbjct: 362 SMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDA 421
Query: 419 EIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
E+GE K + +++ +H +VLL+N+Y+ W + +R ++A G ++PG S +E+
Sbjct: 422 EMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIEL 481
Query: 479 ARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGH 537
++F+ DRSHP +Y + +M +LK GY P+ +VL D+D++E RE L H
Sbjct: 482 NGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNEDRETALLKH 541
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLAIAF L++ + +PIRI +NLR+C+DCH K IS +Y+REIIVRDR R+H FKDG
Sbjct: 542 SEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRIRYHHFKDG 601
Query: 598 TCSCRDYW 605
TCSC DYW
Sbjct: 602 TCSCNDYW 609
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 334/559 (59%), Gaps = 5/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VHA+ +K + + L+ + ++Y+ +F ++ + T+I +
Sbjct: 386 KEVHAYAIKQRLDSDTQVGNTLMDMYMKCRY--IEYSAHVFDRMRIKDHISWTTIITCYA 443
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ EAL ++ E + G++ D ++ +AC+ L+ + Q+H + + G DL
Sbjct: 444 QSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLV 502
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V+N +I++YG+C +V + +F+ ++QK + +W+++I +A++GL +E L LF EM +
Sbjct: 503 VKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTD 562
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P+ LVS+L A L +L GK HG LIR + + +SL+DMY CG L
Sbjct: 563 V-QPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGA 621
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
L +F + K + ++ MI+ MHG GK+A+ +F ML+ G+ PD V ++ +L ACSH+
Sbjct: 622 LKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHS 681
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
LVNEG D M YR+ P +HY CVVDL+GR+G EA E I+SMP++ VVW S
Sbjct: 682 KLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCS 741
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A +VH N E+ +AA L ++ +P +YVL+SN++A +W + ++R ++ +GL
Sbjct: 742 LLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGL 801
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVD 526
+ P S +E+ V+ F ++D SH + I + ++ +L+ E GY+ D VL DV
Sbjct: 802 RKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVS 861
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+EK + L HS++LAI+F LI+ G P+RIA+NLR+C DCH +TKL+S +++R+I+VR
Sbjct: 862 EEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVR 921
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F G+CSC D+W
Sbjct: 922 DANRFHHFSGGSCSCGDFW 940
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 200/397 (50%), Gaps = 20/397 (5%)
Query: 27 LRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
L + + +L+ C L + +++HA +LK G N C + LV + G +D
Sbjct: 262 LSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVM---YTKCGRVDS 318
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +FR+IDE +N+++ +V+ + EA+ +EM G +PD+ +L A
Sbjct: 319 ALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGH 378
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L G ++H + K + D V N+L++MY KC +E+++ +F +M K SW+ I
Sbjct: 379 LGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTI 438
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I +A + E L++F E E + + ++ S+L AC+ L + L K H IRN
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGI-KVDPMMIGSILEACSGLETILLAKQLHCYAIRN- 496
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
L+++V+ +ID+Y +CG + L +F + K +T++ MI+ A G EAL +F+
Sbjct: 497 GLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFA 556
Query: 324 EMLREGLEPDDVVYVGVLSACS-----HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
EM ++PD V V +L A G G L +E IV + +VD
Sbjct: 557 EMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSS------LVD 610
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G L AL++ ++ ++ V+W ++++A+ +H
Sbjct: 611 MYSGCGSLSGALKVFNAVKC-KDMVLWTAMINATGMH 646
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 6/258 (2%)
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
T ++ KE +AL L G P + + A +A+ +G+Q+H H
Sbjct: 29 TSLKQLCKEGNLRQALRLLTSQTP-GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVAT 87
Query: 161 GF--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
G D F+ L+ MYGKC +V A +F M ++V SW+A+I A+ S+G E L
Sbjct: 88 GSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147
Query: 219 LFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++ M + P+ L SVL A G G HG +++ + V +LI
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIA 207
Query: 277 MYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY KCG L+ + +F +M D + +++ MISG +G +AL +F M R L +
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSY 267
Query: 336 VYVGVLSACSHAGLVNEG 353
VGVL C+ +N G
Sbjct: 268 TTVGVLQVCTELAQLNLG 285
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/573 (37%), Positives = 328/573 (57%), Gaps = 8/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C LE F K++H+ V++ G + F LV A S +++ + IF +
Sbjct: 253 SLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKS--AAVENSRKIFNTML 310
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ LI G+V+ + +EA+ L+ M V P+ FTF ++ KACA L G Q
Sbjct: 311 HHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQ 370
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG K+G V NSLINMY + +E A F + +K++ S++ A+A L
Sbjct: 371 LHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANA-KAL 429
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
S+ + F +LS +G + G+ H ++++ N+ +
Sbjct: 430 DSD--ESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINN 487
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI MY KCG E L +F M + +T++ +ISG A HG +AL +F EML G++P
Sbjct: 488 ALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKP 547
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
++V Y+ VLSACSH GL++E F+ M + I P ++HY C+VDL+GR+G+L EA+E
Sbjct: 548 NEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEF 607
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I SMP + +VWR+ L + +VH N ++GE AAK + + H P+ Y+LLSN+YA RW
Sbjct: 608 INSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRW 667
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DVA +R M K L + G+S +EV +V+KF D SHP IY+ + ++ ++K
Sbjct: 668 DDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNL 727
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P+ VL DV++++K + L HS+K+A+A+ALI + PIR+ +NLR+C DCHT
Sbjct: 728 GYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAI 787
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS++ REI+VRD RFH KDG CSC DYW
Sbjct: 788 KYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 133/295 (45%), Gaps = 36/295 (12%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--Q 194
L KAC + L+ G +H + G D + NSLI +Y KC E A +IF+ M +
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR----PEESILVSVLSACTHLGALD 250
+ + SWSAII+ A+N + S L F M +C R P E ++L +C++
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHM--LQCSRNIIYPNEYCFTALLRSCSNPLFFT 162
Query: 251 LGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGC-LEKGLCLFRMMADKCQLTYSVMISG 308
G L++ +V V +LIDM+ K G ++ +F M K +T+++MI+
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGLLCF 357
+ G +A+ +F +L PD +LSAC H+ ++ GL
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGL--- 279
Query: 358 DRMKLEYRIVPTVQHYGC-VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ GC +VD+ ++ + + ++ +M + N + W +L+S
Sbjct: 280 ----------ASDVFVGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISG 323
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 332/563 (58%), Gaps = 9/563 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+++ + VH HV G+ F + L+ +G +D A ++F ++ + + T+I
Sbjct: 32 VQQARLVHEHVFSNGYEPKTFLINTLINMYV--KFGLLDEARNLFDEMPDRNVVSWTTMI 89
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ +AL M GV P+ +T+ ++ +AC L L+ Q+HG + KVG E
Sbjct: 90 SAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR---QLHGSILKVGLE 146
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+FV+++LI+ Y K + A +F +M + W++II A N E L L+ M
Sbjct: 147 SDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRM 206
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ ++S L SVL ACT L L+LG+ H +++ L I+ +L+DMY KCG
Sbjct: 207 KRAD-FVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDL--ILNNALLDMYCKCGS 263
Query: 284 LEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
LE LF RMM +K +++S MI+GLA +G +AL +F M +G +P+ + +GVL
Sbjct: 264 LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLF 323
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSHAGLVN+G F MK + I P +HYGC++DL+GRAG L EA++LI M + +
Sbjct: 324 ACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDA 383
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
V WR LL A +VH N+++ AAK + +++ Y+LLSN+YA +Q+W DVA++R +M
Sbjct: 384 VTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVAEVRRKM 443
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
++G+ + PG S +EV+++V+ F+ D SHP + I + Q+ +L GY PD + VL
Sbjct: 444 RTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVL 503
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
+D++ ++ + L+ HS+KLAI F L+ L I I +NLR+C DCH + KL+S + R
Sbjct: 504 QDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRV 563
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
I++RD R+H F+ G CSC DYW
Sbjct: 564 IVIRDPIRYHHFRGGVCSCGDYW 586
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 12/303 (3%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++L+ C L +++H +LK G + F S L+ T S G A ++F ++
Sbjct: 122 SVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDT--YSKLGEQHDALNVFNEMITGD 179
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+N++I GF + + +E L LY M D T ++ +AC L L+ G Q+H
Sbjct: 180 LVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHV 239
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF-KQMDQKSVASWSAIIAAHASNGLWS 214
HV K ++ DL + N+L++MY KC +E A+ +F + M +K V SWS +IA A NG +
Sbjct: 240 HVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSA 297
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE--T 272
+ LKLF M + K +P ++ VL AC+H G ++ G S+ + ++ E
Sbjct: 298 DALKLFEAMKS-KGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF-GIDPGREHYG 355
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ID+ + G L++ + L M + +T+ +++ +H A+ E+L+ L+
Sbjct: 356 CIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILK--LD 413
Query: 332 PDD 334
P D
Sbjct: 414 PAD 416
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 9/291 (3%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M + D T+ L K C A+++ +H HVF G+E F+ N+LINMY K
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
++ A +F +M ++V SW+ +I+A++++ L + L M E RP SVL
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGV-RPNMYTYSSVLR 125
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC G L+L + HGS+++ +V V ++LID Y K G L +F M +
Sbjct: 126 ACD--GLLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVV 182
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL-LCFDRM 360
++ +I G A + G E L ++ M R D VL AC+ L+ G + +
Sbjct: 183 WNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL 242
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
K + ++ ++D+ + G L +A L M +++ + W ++++
Sbjct: 243 KYDQDLILN----NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/557 (38%), Positives = 325/557 (58%), Gaps = 36/557 (6%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++HA V++ G N F + L++ G + AC + Z+ +N+L+ G +
Sbjct: 1147 QIHAAVVRVGLDLNVFVGNGLISM--YGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCAR 1204
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+F++AL + EM G++PD T +L A V
Sbjct: 1205 NGQFDDALEVCKEMELLGLKPDAGTMASLLPA---------------------------V 1237
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+ + + V F +F ++ KS+ SW+ +IA + +N + +E + +F +M +
Sbjct: 1238 TNTCL------DNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAV 1291
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ + SVL AC L AL LG+ H ++R N+++E +LIDMY KCGCLE
Sbjct: 1292 -DPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 1350
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M + ++++ MIS M+G+G++A+S+FS M GL PD + +V VLSACSHAG
Sbjct: 1351 EVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAG 1410
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L++EG F M E +IVP ++H+ C+VDL+GRAG + EA I+ MP++ N+ VW +L
Sbjct: 1411 LLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGAL 1470
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
LSA +V+ N+ IG +AA LFQ+ YVLLSN+YA+A RW DV +R+ M +KG+
Sbjct: 1471 LSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 1530
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S E+ +V+ F++ D+SHP IYE + + ++K GY P+ L DV+E+
Sbjct: 1531 KMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEE 1590
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
+K L HS+KLAIAFA+++ + GSPIRI +NLR+C DCH KLIS I REI +RD
Sbjct: 1591 DKECHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDT 1650
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F +G CSC DYW
Sbjct: 1651 NRFHHFYNGVCSCGDYW 1667
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/577 (37%), Positives = 331/577 (57%), Gaps = 14/577 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL+TC +L +++H HV+K GF N + S L+ A +G + A I R++
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA--KYGQLALALRILRRLP 525
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + +I G+V+ F EAL L+ EM RG++ DN F + ACA ++AL++G Q
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH + GF DL + N+LI++Y +C +++ A F+++ K+ SW+++++ A +G
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA----LDLGKCTHGSLIRNISALNV 268
+ E L++F M R E + + + A + G+ H +++
Sbjct: 646 FEEALQVFVRM-----LRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER 700
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V SLI +Y K G + F M+++ ++++ MI+G + HG G EAL +F EM
Sbjct: 701 EVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVC 760
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+ P+ V +VGVLSACSH GLV EGL F+ M + +VP +HY CVVDL+GRAG L
Sbjct: 761 GIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDR 820
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I+ MPI + ++WR+LLSA +H N+EIGE AA +L ++ + YVL+SN+YA
Sbjct: 821 AMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAV 880
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
+++W R M +G+ + PG S +EV V+ F + D+ HP + IYE I + +
Sbjct: 881 SRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRR 940
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
GY D +L + ++ +K HS+KLAIAF L+ L PIR+ +NLR+CNDC
Sbjct: 941 TSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDC 1000
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H + K +S I R IIVRD RFH F G CSC+D+W
Sbjct: 1001 HNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 183/364 (50%), Gaps = 5/364 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H V+KWGF + + LVA + S + A IF ++ +N+LI G V
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSR--KLISAERIFSTMNSRDGVSYNSLISGLV 338
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ + AL L+ +M ++PD T +L ACA + AL +GMQ+H H K G D+
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADII 398
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
++ SL+++Y KC VE A F + +++ W+ ++ A+ S+ ++F +M E
Sbjct: 399 LEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEG 458
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P + S+L CT LGAL LG+ H +I+ LNV V + LIDMY K G L
Sbjct: 459 MI-PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALA 517
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
L + R + + ++++ MI+G H EAL +F EM G++ D++ + +SAC+
Sbjct: 518 LRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGI 577
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
+ +G + + ++ L R G + EA + + +N++ W S
Sbjct: 578 RALRQGQQIHAQ-SYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG-DKNNISWNS 635
Query: 408 LLSA 411
L+S
Sbjct: 636 LVSG 639
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 20/391 (5%)
Query: 37 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK C K+VH+ +GF +P A+ L+ S G ++ A +F I
Sbjct: 165 VLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDL--YSKNGYIESAKKVFNCIC 222
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G + EEA+ L+ +M + P + ++ A K+Q + G Q
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H V K GF + +V N L+ +Y + K+ A IF M+ + S++++I+ G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
L+LF +M + C +P+ + S+LSAC +GAL G H I+ + ++I+E
Sbjct: 343 SDRALELFTKMQRD-CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+D+Y KC +E F + + ++VM+ ++ IF +M EG+ P
Sbjct: 402 SLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--VVDLMGRAGMLG 387
+ Y +L C+ G + G ++ ++ T + Y C ++D+ + G L
Sbjct: 462 NQFTYPSILRTCTSLGALYLG------EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLA 515
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
AL +++ +P ++DVV + + A V H++
Sbjct: 516 LALRILRRLP--EDDVVSWTAMIAGYVQHDM 544
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 7/335 (2%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E +R Q L +L+ C +L E ++H + K GF P +LV H G
Sbjct: 51 ERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN-YFRH-GD 108
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
A +F + F +N +I FV + + L+ M G+ P+ +TF + KA
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 141 CAKLQ-ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C A Q+H F GF+ V N LI++Y K +E A +F + K + +
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W A+I+ + NGL E + LF +M+ + + P +L SVLSA T + +LG+ H +
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIF-PTPYVLSSVLSASTKIQLFELGEQLHCLV 287
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+ V L+ +Y + L +F M + ++Y+ +ISGL G AL
Sbjct: 288 IKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRAL 347
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+F++M R+ L+PD + +LSAC+ G +++G+
Sbjct: 348 ELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
L N M ERGV + + L + C +L E M++H + K GF+ + + +SL++ Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+ A +F + +SV SW+ +I + + LF M E P
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYTFA 163
Query: 238 SVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VL AC A + K H + +V LID+Y K G +E +F +
Sbjct: 164 GVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
K +T+ MISGL+ +G +EA+ +F +M + P V VLSA + L G
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/558 (35%), Positives = 325/558 (58%), Gaps = 2/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K VH ++ GF N F + LV S +G M A +F + E +N ++ G+
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDM--YSKFGCMGVARQLFESMSERNVVTWNAIVSGYS 199
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
EEA+ L+N M +G+ D +T +L A + L+ G IHG + + G+E D
Sbjct: 200 DHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH 259
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
++ +L+++Y V+ A +F +M K VA+W+ ++ +S W +K F +M +
Sbjct: 260 IKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQ 319
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ + L+ +LS+C+H GAL G+ H I+ A N+ V +++IDMY CG LE
Sbjct: 320 NLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
F M +K + ++ MI+G M+G G +A+ +F +M GL+PD+ +V VL ACSHA
Sbjct: 380 KRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHA 439
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G+V EGL F M ++P +QHY CV+D++GRAG L A I +MP Q + V+ +
Sbjct: 440 GMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A ++H N+++G ++ +F++ + YVLLSNMYA A W V R + SK +
Sbjct: 500 LLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRM 559
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ PGFS +E+ +++Y F++ ++ HP + I ++ + ++K GY P+ + +L+DV +
Sbjct: 560 KKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSD 619
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
D K++ L HS+K+AIAF L+ + IRI +NLR C+DCHT +K +S ++ R ++++D
Sbjct: 620 DMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKD 679
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH F+DG CSCRDYW
Sbjct: 680 ANRFHVFQDGVCSCRDYW 697
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 230/498 (46%), Gaps = 20/498 (4%)
Query: 23 PELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
P L Q +IL+ K+L+ +++HA ++ G N F +++L+ A + G +
Sbjct: 16 PTQRLSPLAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMN--AYVYCGLLA 73
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A IF + LI G K F EA+ ++ EM +P+ T ++ A A
Sbjct: 74 DAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFA 133
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L ++ +H + GFE ++FV+ +L++MY K + A +F+ M +++V +W+A
Sbjct: 134 NLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNA 193
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
I++ ++ +G E + LF M + +I+ S++ A +G L +G HG +IR
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIM-SLIPASLSVGCLQVGTGIHGFIIRT 252
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ ++T+L+D+YV C++ +F M+ K +++M++G + A+ F
Sbjct: 253 GYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHF 312
Query: 323 SEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
++ML + L+ D + +G+LS+CSH+G + +G + ++ + V+D+
Sbjct: 313 NKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYA 371
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH--HPSDY 439
G L +A M +++ V W ++++ + ++ G A Q+ P +
Sbjct: 372 NCGNLEDAKRFFYGMG-EKDVVCWNAMIAGNGMN---GYGTDAIDLFLQMKGSGLDPDES 427
Query: 440 VLLSNMYA--RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
+S +YA A Y+ +I M K + P + Q D
Sbjct: 428 TFVSVLYACSHAGMVYEGLQIFYHMV-KTSHVIPNLQHYACVIDILGRAGQ------LDA 480
Query: 498 IYEMIHQMEWQLKFEGYS 515
Y I+ M +Q F+ YS
Sbjct: 481 AYSFINNMPFQPDFDVYS 498
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/567 (36%), Positives = 324/567 (57%), Gaps = 3/567 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L+ NL+ + +HA V K+GF SN + T + + G + ++ + +
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGF-ETDVAVSNALVTMYMKN-GCVHDGTKLYESMVDR 479
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N + G ++ L ++ M E G P+ +TF ++ +C+ L + G Q+H
Sbjct: 480 DLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ K + + FV +LI+MY KC +E A F ++ + + +W+ II +A
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGE 599
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ L F +M E +P E L LS C+ L +L+ G+ H + ++ ++ V ++L
Sbjct: 600 KALNYFRQMQQEGV-KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSAL 658
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCGC+E+ LF + + + ++ +I G A +GQG +AL+ F ML EG+ PD
Sbjct: 659 VDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDG 718
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V + G+LSACSH GLV EG F+ M ++ I PTV H C+VD++GR G E + IQ
Sbjct: 719 VTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQ 778
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
M + QN ++W ++L ASK+H+NL +GE AA LF++ S Y+LLSN++A RW D
Sbjct: 779 KMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDD 838
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V ++R+ M+SKG+ + PG S VE +V+ FVS D SHP I+ + +++ +L Y
Sbjct: 839 VKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQY 898
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P VL +V E EK+E L+ HS++LA+ FALI S IRI +NLR+C DCH K
Sbjct: 899 VPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKH 958
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSC 601
IS I +EI+VRD +RFH FK+G CSC
Sbjct: 959 ISSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 203/392 (51%), Gaps = 14/392 (3%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSH 77
EL+++ E T+LK C KNL++ + +H+ ++K G+ N F LV + C L
Sbjct: 307 ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGL-- 364
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
++D A +F+ I +P ++ LI ++ + EE++ L++ M P+ +T +L
Sbjct: 365 --AID-AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSL 421
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
A L+ G IH V+K GFE D+ V N+L+ MY K V + +++ M + +
Sbjct: 422 LSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDL 481
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+A ++ G++ L +F M E+ + P +S+L +C+ L + G+ H
Sbjct: 482 ISWNAYLSGLHDCGMYDRPLTIFYHM-LEEGFIPNMYTFISILGSCSCLFDVHYGRQVHA 540
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+I+N N V T+LIDMY KC LE F ++ + T++V+I+ A QG++
Sbjct: 541 HIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEK 600
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL+ F +M +EG++P++ G LS CS + EG M + V + +V
Sbjct: 601 ALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
D+ + G + EA L +++ I+++ + W +++
Sbjct: 660 DMYAKCGCMEEAEALFEAL-IRRDTIAWNTII 690
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 149/305 (48%), Gaps = 3/305 (0%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
C L+ K++HA K G + F S LV A G ++ A +F + E +N
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA--KCGEIELASKMFIGMPEQNDVTWN 283
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
L+ G+ + + L L+ M E V+ + FT + K CA + LK+G IH + K
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G+E + F+ L++MY KC A +FK + + + WSA+I G E +KLF
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M P + + S+LSA T+ G L G+ H + + +V V +L+ MY+K
Sbjct: 404 HLMRLGDTL-PNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK 462
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
GC+ G L+ M D+ ++++ +SGL G L+IF ML EG P+ ++ +
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522
Query: 341 LSACS 345
L +CS
Sbjct: 523 LGSCS 527
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 166/346 (47%), Gaps = 12/346 (3%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
N+ A C S YA + ++ + + LI+G V E ++++L+ EM G+
Sbjct: 155 NVYAKCRYSA-----YARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P+ FT KAC+ AL G Q+H FK+G DLFV ++L+++Y KC ++E AS
Sbjct: 210 MPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASK 269
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCWRPEESILVSVLSACTH 245
+F M +++ +W+ ++ +A G + LKLF M + KC E L +VL C +
Sbjct: 270 MFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKC---NEFTLTTVLKGCAN 326
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L G+ H +I+ N + L+DMY KCG + +F+ + + +S +
Sbjct: 327 SKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSAL 386
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
I+ L GQ +E++ +F M P+ +LSA ++ G + G +Y
Sbjct: 387 ITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYG-QSIHACVWKYG 445
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
V +V + + G + + +L +SM + ++ + W + LS
Sbjct: 446 FETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSG 490
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 157/316 (49%), Gaps = 8/316 (2%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ ++ + CA ++L IHG + K D + SL+N+Y KC +A + +M
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ V SW+A+I + G ++ + LF EM NE P E L + L AC+ ALDLGK
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM-PNEFTLATGLKACSLCMALDLGK 233
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + L++ V ++L+D+Y KCG +E +F M ++ +T++V+++G A G
Sbjct: 234 QMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRG 293
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQH 372
L +F M+ ++ ++ VL C+++ + +G + +K Y +
Sbjct: 294 DVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYE---GNEF 350
Query: 373 YGC-VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
GC +VD+ + G+ +A+ + +++ + + VVW +L++ E I +L ++
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSE-ESIKLFHLMRL 408
Query: 432 NSHHPSDYVLLSNMYA 447
P+ Y + S + A
Sbjct: 409 GDTLPNQYTICSLLSA 424
>gi|356521885|ref|XP_003529581.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Glycine max]
Length = 603
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 336/572 (58%), Gaps = 6/572 (1%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+TCK+L H++V+K G + F A+N + C L + ++D+A +F ++
Sbjct: 34 LQTCKDLTSATSTHSNVVKSGLSNDTF-ATNHLINCYLRLF-TIDHAQKLFDEMPHRNVV 91
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +L+ G+V + + AL L+++M V P+ FTF L AC+ L L+ G +IH V
Sbjct: 92 SWTSLMAGYVSQGQPNMALCLFHQMQGTLVLPNEFTFATLINACSILANLEIGRRIHALV 151
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
G +L +SLI+MYGKC V+ A IF M ++V SW+++I ++ N L
Sbjct: 152 EVSGLGSNLVACSSLIDMYGKCNHVDEARLIFDSMCTRNVVSWTSMITTYSQNAQGHHAL 211
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+LF E N+ + +P +L S +SAC LG+L GK THG +IR + ++ ++L+DM
Sbjct: 212 QLFKEFNHSRLDKPNHFMLCSAVSACASLGSLGSGKITHGVVIRLGHEASDVIASALVDM 271
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCGC+ +FR + + + Y+ MI G A +G G +L +F EM+ ++P+D+ +
Sbjct: 272 YAKCGCVNYSAKIFRRIQNPSVIPYTSMIVGAAKYGLGILSLQLFQEMVVRRIKPNDITF 331
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
VGVL ACSH+GLV++GL D M +Y + P +HY C+ D++GR G + EA +L +S+
Sbjct: 332 VGVLHACSHSGLVDKGLELLDSMDGKYGVTPDAKHYTCIADMLGRVGRIEEAYQLAKSVQ 391
Query: 398 IQQND--VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
++ + ++W +LLSAS+++ ++I A+ L + N YV LSN YA A W +
Sbjct: 392 VEGDGYAMLWGTLLSASRLYGRVDIALEASNRLIESNQQVAGAYVTLSNAYALAGDWENA 451
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS-HPAWDNIYEMIHQMEWQLKFEGY 514
+R+EM G+ + PG S +E+ Y F + D S + I ++ ++E ++K GY
Sbjct: 452 HNLRSEMKHTGVYKEPGSSWIEIKESTYLFHAGDISKYTQGREILSLLRELEERMKGRGY 511
Query: 515 SPDISQ-VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
V DV+E+ K E + HS+KLA+AF LI+ +G IRI +NLRMC DCH K
Sbjct: 512 VGGTKGLVFVDVEEEAKEEIVSMHSEKLALAFGLINTPKGVTIRIMKNLRMCRDCHGAFK 571
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I ERE++VRD RFH FK+G C+C D+W
Sbjct: 572 LISDIVERELVVRDVNRFHHFKNGLCTCGDFW 603
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 328/577 (56%), Gaps = 14/577 (2%)
Query: 36 TILKTCKNLEE----FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++LK +L E K++H H +K + F ++ L+ A S M A +F +
Sbjct: 428 SVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALID--AYSRNRCMKEAEVLFGR- 484
Query: 92 DEPGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
FD N ++ G+ + + + L L+ M ++G D+FT + K C L A+
Sbjct: 485 ---NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAIN 541
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+G Q+H + K G++ DL+V + +++MY KC + A F + +W+ +I+
Sbjct: 542 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCI 601
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
NG L +F +M P+E + ++ A + L AL+ G+ H + ++ +
Sbjct: 602 ENGEEERALHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDP 660
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V TSL+DMY KCG ++ CLF+ + ++ M+ GLA HG+GKEAL +F +M
Sbjct: 661 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESL 720
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PD V ++GVLSACSH+GLV+E M +Y I P ++HY C+ D +GRAG++ E
Sbjct: 721 GIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKE 780
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A LI SM ++ + ++R+LL+A +V + E G+ A L ++ S YVLLSNMYA
Sbjct: 781 AENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 840
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A +W ++ RT M + + PGFS +EV K++ FV DRS+P + IY+ + M
Sbjct: 841 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRD 900
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K EGY P+ L DV+E+EK L HS+KLA+AF L+ +PIR+ +NLR+C DC
Sbjct: 901 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 960
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H K IS +Y+REI++RD RFHRFKDG CSC DYW
Sbjct: 961 HNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 152/316 (48%), Gaps = 11/316 (3%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N ++ G++ ++ L + +M E +E D TF + +L +L G Q+H K
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+G + L V NSLINMY K K+ A +F M ++ + SW+++IA A + L E + L
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 220 FGEMNNEKC-WRPEESILVSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F M +C +P+ + SVL A + L L L K H I+ + + V T+LID
Sbjct: 411 F--MQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDA 468
Query: 278 YVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y + C+++ LF R D + ++ M+SG G + L +F+ M ++G DD
Sbjct: 469 YSRNRCMKEAEVLFGRNNFD--LVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFT 526
Query: 337 YVGVLSACSHAGLVNEGLLCFD-RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
VL C +N+G +K Y + V ++D+ + G + A S
Sbjct: 527 LATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDS 584
Query: 396 MPIQQNDVVWRSLLSA 411
+P+ +DV W +L+S
Sbjct: 585 IPV-PDDVAWTTLISG 599
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 95/192 (49%), Gaps = 6/192 (3%)
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA- 208
G H + + + F+ N+LI+MY KC + +A +F +M ++ + SW++I+AA+A
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 209 -SNGL---WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
S G+ E LF + + + + L +L C H G + + HG +
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMT-LSPMLKLCLHSGYVCASESFHGYACKIGL 183
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V +L+++Y+K G +++G LF M + + +++M+ G +EA+ + S
Sbjct: 184 DGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 243
Query: 325 MLREGLEPDDVV 336
GL P+++
Sbjct: 244 FHTSGLHPNEIT 255
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K HA +L F +NL++ S GS+ YA +F ++ E +N+++ +
Sbjct: 66 KCTHARILALEENPERFLVNNLISM--YSKCGSLTYARRVFDKMPERDLVSWNSILAAYA 123
Query: 108 KEVE-----FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ E +EA L+ + + V T + K C + HG+ K+G
Sbjct: 124 QSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGL 183
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+ D FV +L+N+Y K KV+ +F++M + V W+ ++ A+ G E + L
Sbjct: 184 DGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 240
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L LGKCTH ++ + +LI MY KCG L +F M ++ ++++ +++
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 309 LAMHGQG-----KEALSIFSEMLREGLEPDDVVYVG------VLSACSHAGLV-----NE 352
A +G KEA +F +LR+ DVVY +L C H+G V
Sbjct: 122 YAQSSEGVVENVKEAFLLF-RILRQ-----DVVYTSRMTLSPMLKLCLHSGYVCASESFH 175
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G C + + + G +V++ + G + E L + MP + DVV +L+ +
Sbjct: 176 GYACKIGLDGDDFVA------GALVNIYLKFGKVKEGRVLFEEMPYR--DVVLWNLMLKA 227
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
+ + I + F + HP++ L
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITL 256
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 334/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L+ F K VH VLK + + + L+ + G D A F + +
Sbjct: 153 VLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLEL--YTRCGDNDDAWRAFGDMPK 210
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
++ +I F + + E+AL ++ +M V P+ FTF ++ +A A +++L I
Sbjct: 211 NDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTI 270
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HGH K G D+FV N+L+ Y KC +E + +F+ + ++ SW+ II ++ G
Sbjct: 271 HGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDG 330
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
L LF M + + E S+L AC L AL+LG H + I +V V +
Sbjct: 331 ERALSLFSNMLRYQV-QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG ++ +F M+ + +++++ +I G +MHG G EA+ +F+ M +PD
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPD 449
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++ +VGVLSACS+ G ++EG F MK +Y I P ++HY C+V LMGR+G L +A++ I
Sbjct: 450 ELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFI 509
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ +P + + ++WR+LL A +H+++E+G I+A+ + ++ + +VLLSN+YARA+RW
Sbjct: 510 EDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWG 569
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+VA +R M KG+ + PG S +E V+ F D SH I M+ + + + G
Sbjct: 570 NVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAG 629
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
YSP ++ VL DV++DEK L HS++LA+AF L+ + G PIRI +NLR+C DCH+ K
Sbjct: 630 YSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVIK 689
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I R+IIVRD RFH F++G+CSC DYW
Sbjct: 690 LISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 13/417 (3%)
Query: 36 TILKTCKNLE--EFKK-VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+LK ++E E + VH VLK G+ N F + L+ ++S G + A +F +I
Sbjct: 51 TVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVS--GCVSMAREVFDEIS 108
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I + + F EAL +++M G +P+NFTF + KAC LQ G
Sbjct: 109 SKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKT 168
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H V K +E DL+V L+ +Y +C + A F M + V WS +I+ A +G
Sbjct: 169 VHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQ 228
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L++F +M P + SVL A + +LDL K HG ++ + +V V
Sbjct: 229 SEKALEIFCQMRRAFVI-PNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSN 287
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ Y KCGC+E+ + LF ++D+ ++++ +I G G+ ALS+FS MLR ++
Sbjct: 288 ALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQA 347
Query: 333 DDVVYVGVLSACSHAGLVNEGLL--CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+V Y +L AC+ + GL C + + V ++D+ + G + +A
Sbjct: 348 TEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN---ALIDMYAKCGSIKDAR 404
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ + + ++ V W +++ + H L + I NL + P + + + A
Sbjct: 405 FMFDMLDL-RDKVSWNAIICGYSM-HGLGVEAIKMFNLMKETKCKPDELTFVGVLSA 459
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 21/332 (6%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F ++ E F TLI G+ + +F EA L+ + G E + F F + K ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G +HG V KVG+ + F+ +LI+ Y V A +F ++ K + SW+ +IA+
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+A N +SE L+ F +M ++P VL AC L D GK H S+++
Sbjct: 122 YAENDCFSEALEFFSQMRVAG-FKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ V L+++Y +CG + F M + +S MIS A GQ ++AL IF +M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM------ 380
R + P+ + VL A + + + L I G D+
Sbjct: 241 RAFVIPNQFTFSSVLQASAD----------IESLDLSKTIHGHALKAGLSTDVFVSNALM 290
Query: 381 ---GRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ G + +++EL +++ +NDV W +++
Sbjct: 291 ACYAKCGCIEQSMELFEALS-DRNDVSWNTII 321
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/586 (36%), Positives = 338/586 (57%), Gaps = 9/586 (1%)
Query: 23 PELNLRLKEQEC-LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
P + R E E +T + L E ++VHA ++ + F + LV G++
Sbjct: 36 PGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYV--RCGAL 93
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D A ++ ++ E + T+I G+ + EAL L+ +M G P+ +T + +C
Sbjct: 94 DDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSC 153
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ Q++ +G Q+H + K FE +FV +SL++MY K E ++ A +F + ++ V S +
Sbjct: 154 SGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCT 213
Query: 202 AIIAAHASNGLWSECLKLFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
AII+ +A GL E L LF ++ +E +C + LV+ LS L +LD GK H +
Sbjct: 214 AIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG---LASLDYGKQVHALI 270
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+R V ++ SLIDMY KCG L +F M ++ ++++ M+ G HG G E +
Sbjct: 271 LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVI 330
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
S+F ++ +E ++PD V + VLS CSH GLV+EGL FD + E + HYGC++DL
Sbjct: 331 SLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 389
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GR+G L +AL LI++MP + +W SLL A +VH N+ +GE+ A+ L ++ + +Y
Sbjct: 390 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 449
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
V+LSN+YA A W DV K+R M K + + PG S + + + ++ F S +R HP+ +I
Sbjct: 450 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 509
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
I ++ +K G+ PD+S VL DVD+++K L GHS+KLAI F L++ G IR+
Sbjct: 510 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVM 569
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH + K +S +YEREI +RD+ RFH G C+C DYW
Sbjct: 570 KNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 333/609 (54%), Gaps = 38/609 (6%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
L ++L C ++HA V++ G + A L A S G +D++ ++
Sbjct: 22 LTADRAASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAAS--GRLDHSLTLL 79
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
+ +P + + I L L ++M G+ P T A AC + L
Sbjct: 80 GRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPAC---RGLS 136
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +H + FK+ D +V +L++MY + A A+F +M V S +A++ +A
Sbjct: 137 LGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYA 196
Query: 209 SNGLWSECLKLFGEMNNEK--CWR----------------------------PEESILVS 238
+ G + +LF + + CW P+E +V
Sbjct: 197 NMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVL 256
Query: 239 VLSACTHLGALDLGKCTHGSLIRNIS--ALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VLSA LG ++ GK H S ++N LNV V T+L+DMY KCG LE + +F + +
Sbjct: 257 VLSAVAQLGTVESGKWLH-SYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGN 315
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K + ++ MI+G AMHG ++AL +F ++ +GL P D+ ++G+L+ACSH+GLV EG
Sbjct: 316 KDIVVWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSF 375
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M+ EY I P ++HYGC+VDL+GRAG++ EA L+QS+ I + V+W SLL+A ++H
Sbjct: 376 FQSMEHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHK 435
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N+ +G+ A L + Y+LLSN+YA +W +VA++R+ M + G+ + PG S +
Sbjct: 436 NMALGQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAI 495
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
E+ RKVY+FV+ D SHP D IY M+ +M +K G+ P VL D+DE K + L
Sbjct: 496 EIDRKVYEFVAGDMSHPCTDEIYAMLDKMNALVKEHGHVPQTELVLHDLDEATKEKALAV 555
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF LI GS I+I +NLR C+DCH KLIS I R+I+ RDR RFH F D
Sbjct: 556 HSEKLAVAFGLISSRPGSTIKIVKNLRACSDCHAVLKLISKITSRKIVFRDRNRFHHFVD 615
Query: 597 GTCSCRDYW 605
G+C+C DYW
Sbjct: 616 GSCTCGDYW 624
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 332/574 (57%), Gaps = 10/574 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+T KNL++ +K+H H+ F + F ++L+ C GS+ A +F ++
Sbjct: 58 ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKC-----GSVVEAHKVFDKM 112
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ + +LI G+ + EA+ L M + +P+ FTF +L KA G
Sbjct: 113 RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGG 172
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH K + D++V ++L++MY +C K++ A+A+F ++D K+ SW+A+I+ A G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L +F EM + S+ S +GAL+ GK H ++++ L V
Sbjct: 233 DGETALMVFAEMQRNG-FEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVG 291
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+++DMY K G + +F + +K +T++ M++ A +G GKEA+S F EM + G+
Sbjct: 292 NTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIY 351
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+ + ++ +L+ACSH GLV EG FD +K EY + P ++HY VVDL+GRAG+L AL
Sbjct: 352 LNQITFLCILTACSHGGLVKEGKHYFDMIK-EYNLEPEIEHYVTVVDLLGRAGLLNYALV 410
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I MP++ VW +LL+A ++H N ++G+ AA ++FQ++ VLL N+YA
Sbjct: 411 FIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGH 470
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W A++R M + G+ + P S VE+ V+ FV+ D +HP + IY+M ++ +++
Sbjct: 471 WDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRK 530
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY PD+ VL VDE E+ L+ HS+K+A+AFALI + G+ IRI +N+R+C DCH+
Sbjct: 531 EGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSA 590
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS ++EREI+VRD RFH F +G+CSC DYW
Sbjct: 591 FKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 147/285 (51%), Gaps = 3/285 (1%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+ P + A ACA+ + L + +IHGH+ FE D F+ NSLI++Y KC V A
Sbjct: 47 LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M +K + SW+++IA +A N + +E + L M + ++P S+L A
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR-FKPNGFTFASLLKAAGAY 165
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+G H ++ +V V ++L+DMY +CG ++ +F + K ++++ +I
Sbjct: 166 ADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
SG A G G+ AL +F+EM R G E Y + S + G + +G M ++ R
Sbjct: 226 SGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHM-VKSRQ 284
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
T ++D+ ++G + +A ++ + + + ++ V W S+L+A
Sbjct: 285 KLTAFVGNTMLDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTA 328
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/586 (36%), Positives = 338/586 (57%), Gaps = 9/586 (1%)
Query: 23 PELNLRLKEQEC-LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
P + R E E +T + L E ++VHA ++ + F + LV G++
Sbjct: 4 PGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYV--RCGAL 61
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D A ++ ++ E + T+I G+ + EAL L+ +M G P+ +T + +C
Sbjct: 62 DDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSC 121
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ Q++ +G Q+H + K FE +FV +SL++MY K E ++ A +F + ++ V S +
Sbjct: 122 SGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCT 181
Query: 202 AIIAAHASNGLWSECLKLFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
AII+ +A GL E L LF ++ +E +C + LV+ LS L +LD GK H +
Sbjct: 182 AIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG---LASLDYGKQVHALI 238
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+R V ++ SLIDMY KCG L +F M ++ ++++ M+ G HG G E +
Sbjct: 239 LRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVI 298
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
S+F ++ +E ++PD V + VLS CSH GLV+EGL FD + E + HYGC++DL
Sbjct: 299 SLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDL 357
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GR+G L +AL LI++MP + +W SLL A +VH N+ +GE+ A+ L ++ + +Y
Sbjct: 358 LGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNY 417
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
V+LSN+YA A W DV K+R M K + + PG S + + + ++ F S +R HP+ +I
Sbjct: 418 VILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDIN 477
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
I ++ +K G+ PD+S VL DVD+++K L GHS+KLAI F L++ G IR+
Sbjct: 478 AKIKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVM 537
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH + K +S +YEREI +RD+ RFH G C+C DYW
Sbjct: 538 KNLRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/575 (36%), Positives = 331/575 (57%), Gaps = 16/575 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSIFRQI 91
+++ C L + ++H+ L+ GF + + LV A S+ +MDYA +F ++
Sbjct: 259 SMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERM 318
Query: 92 DEPGAFDFNTLIRGFVKE-VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + LI G+V+ V+ + + L+ EM ++P++ T+ ++ KACA + G
Sbjct: 319 RKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSG 378
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H HV K V N+L++MY + +E A +F Q+ ++S+ S +
Sbjct: 379 RQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMISC-------ITE 431
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + G M+ S S++SA +G L G+ H ++ + V
Sbjct: 432 GRDAPLDHRIGRMD----MGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFV 487
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SL+ MY +CG LE F + D+ ++++ MISGLA HG + ALS+F +M+ G+
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+P+DV Y+ VLSACSH GLV EG F M+ ++ ++P ++HY C+VDL+ R+G++ EAL
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEAL 607
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
E I MP++ + +VW++LL A + H N+E+GEIAAKN+ ++ P+ YVLLSN+YA A
Sbjct: 608 EFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAG 667
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W +VA+IR+ M LN+ G S +EV ++F + D SHP +IY + + ++K
Sbjct: 668 LWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIK 727
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL D+ ++ K + L HS+K+A+AF LI S PIRI +NLR+C DCH+
Sbjct: 728 GMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHS 787
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S REII+RD RFHR KDG CSC +YW
Sbjct: 788 AIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Query: 147 LKEGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAII 204
L+ G +H + + + D V NSL+ +Y +C V A +F M + + SW+A+
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC--THLGALDLGKCTHGSLIRN 262
+ A NG E L L GEM E P L +V AC L L G
Sbjct: 124 SCLARNGAERESLLLIGEML-ESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ ++ V ++LIDM + G L +F + +K + ++++IS +EA+ IF
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+ L +G EPD ++SAC+ G V GL
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGL 274
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 345/621 (55%), Gaps = 49/621 (7%)
Query: 28 RLKEQECLTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSM 81
RL + L ILK + E ++H K +PF + ++ A+C G +
Sbjct: 108 RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASC-----GRI 162
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
+YA ++F ++ +NT+I + + +EA L+ EM + V PD + AC
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 142 AKLQALKEGMQIHGHVFK-----------------VGFEC--------------DLFVQN 170
+ ++ I+ + + G C +LFV
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
++++ Y KC +++ A IF Q ++K + W+ +I+A+ + E L++F EM +
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI-K 341
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P+ + SV+SAC +LG LD K H + N + + +LI+MY KCG L+ +
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F M + +++S MI+ L+MHG+ +ALS+F+ M +E +EP++V +VGVL CSH+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
EG F M EY I P ++HYGC+VDL GRA +L EALE+I+SMP+ N V+W SL+S
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A ++H LE+G+ AAK + ++ H VL+SN+YAR QRW DV IR M K + +
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 471 PGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEK 530
G S ++ K ++F+ D+ H + IY + ++ +LK GY PD VL DV+E+EK
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 531 RERLKGHSQKLAIAFALIHLSQGSP------IRIARNLRMCNDCHTYTKLISVIYEREII 584
++ + HS+KLA+ F L++ + IRI +NLR+C DCH + KL+S +YEREII
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREII 701
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRDR RFH +K+G CSCRDYW
Sbjct: 702 VRDRTRFHCYKNGLCSCRDYW 722
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 194/416 (46%), Gaps = 43/416 (10%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L L CK+L K++HAH+L+ N S L S ++ YA ++F I P
Sbjct: 16 LEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSP 73
Query: 95 G-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ FN +R + E + Y + G D F+F + KA +K+ AL EGM++
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG FK+ CD FV+ ++MY C ++ +A +F +M + V +W+ +I + GL
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E KLF EM + P+E IL +++SAC G + + + LI N ++ + T+
Sbjct: 194 DEAFKLFEEMKDSNVM-PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ------------------- 314
L+ MY GC++ FR M+ + + M+SG + G+
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 315 ------------GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL---CFDR 359
+EAL +F EM G++PD V V+SAC++ G++++ C
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
LE + ++++ + G L ++ + MP ++N V W S+++A +H
Sbjct: 373 NGLESELSIN----NALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 320/527 (60%), Gaps = 3/527 (0%)
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S++ + +F ++ + T+I + + + EA+ + + G++ D ++ +
Sbjct: 415 SVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILE 474
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
AC+ L+++ Q+H + + G DL ++N +I++YG+C +V +A IF+ +D+K + +
Sbjct: 475 ACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVT 533
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W++++ A NGL E + LFG+M N +P+ LV +L A L +L GK HG L
Sbjct: 534 WTSMVNCFAENGLLHEAVALFGKMLNAGI-QPDSVALVGILGAIAGLSSLTKGKEIHGFL 592
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
IR + V +SL+DMY CG + L +F K + ++ MI+ MHG GK+A+
Sbjct: 593 IRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAI 652
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
IF ML G+ PD V ++ +L ACSH+ LV+EG D M +Y++ P +HY CVVDL
Sbjct: 653 YIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDL 712
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GR+G EA + I+SMP++ VVW +LL A ++H N E+ IA L ++ +P +Y
Sbjct: 713 LGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNY 772
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VL+SN++A +W +V +IRT+M +GL + P S +E+ V+ F ++D SH I+
Sbjct: 773 VLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIH 832
Query: 500 EMIHQMEWQLKFEG-YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ ++ +L+ EG Y D S VL DV E+EK + L HS++LAI+F LI + G+P+RI
Sbjct: 833 LKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRI 892
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
A+NLR+C DCH +TKL+S ++EREI+VRD RFH F GTCSC D+W
Sbjct: 893 AKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 206/391 (52%), Gaps = 28/391 (7%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV--ATCALSHWGSMDYACSIFRQI 91
+L+ C L + +++HA +LK G +N C + LV A C G +D A +FR+I
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLVMYARC-----GWVDSALRVFREI 325
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N+++ +V+ + EA+ + EM + G PD+ +L A L L G
Sbjct: 326 GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGR 385
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H + K + DL + N+L++MY KC VE ++ +F +M K SW+ IIA +A +
Sbjct: 386 EVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSS 445
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+SE + F E + + ++ S+L AC+ L ++ L K H IRN L++I++
Sbjct: 446 RYSEAIGKFRTAQKEGI-KVDPMMMGSILEACSGLKSISLLKQVHSYAIRN-GLLDLILK 503
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ID+Y +CG + L +F M+ K +T++ M++ A +G EA+++F +ML G++
Sbjct: 504 NRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQ 563
Query: 332 PDDVVYVGVLSACSHAGLVN-------EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
PD V VG+L A AGL + G L + +E +V + +VD+ G
Sbjct: 564 PDSVALVGILGAI--AGLSSLTKGKEIHGFLIRGKFPVEGAVVSS------LVDMYSGCG 615
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ AL++ ++ V+W ++++A+ +H
Sbjct: 616 SMNYALKVFDEAKC-KDVVLWTAMINATGMH 645
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 12/327 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIFRQI 91
L ++ + + E +++HAH + G + F A+ L+ G + A +F +
Sbjct: 62 LDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFM--YGKCGRLPDAHRLFDGM 119
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER----GVEPDNFTFPALFKACAKLQAL 147
F +N LI + EA+ +Y M G PD T ++ KAC
Sbjct: 120 PARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDG 179
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAA 206
+ G ++HG K G + V N+L+ MY KC ++ A +F+ M D + VASW++ I+
Sbjct: 180 RCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISG 239
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
NG++ E L LF M ++ + V VL C L L+ G+ H +L++ +
Sbjct: 240 CVQNGMFLEALDLFRRMQSDG-FSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF 298
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
N+ L+ MY +CG ++ L +FR + DK ++++ M+S + EA+ F EM+
Sbjct: 299 NIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMV 357
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEG 353
+ G PD V +LSA H G + G
Sbjct: 358 QNGFNPDHACIVSLLSAVGHLGRLING 384
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 27/157 (17%)
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE- 328
+ T L+ MY KCG L LF M + +++ +I G EA+ ++ M
Sbjct: 95 LATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASE 154
Query: 329 ---GLEPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
G PD VL AC H V GL DR L
Sbjct: 155 PVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGL---DRSTLVAN--------- 202
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+V + + G+L AL + + M ++ W S +S
Sbjct: 203 ALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISG 239
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/577 (37%), Positives = 330/577 (57%), Gaps = 14/577 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL+TC +L +++H HV+K GF N + S L+ A +G + A I R++
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYA--KYGQLALALRILRRLP 525
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + +I G+V+ F EAL L+ EM RG++ DN F + ACA ++AL++G Q
Sbjct: 526 EDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ 585
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH + GF DL + N+LI++Y +C +++ A F+++ K+ SW+++++ A +G
Sbjct: 586 IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGY 645
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA----LDLGKCTHGSLIRNISALNV 268
+ E L++F M R E + + + A + G+ H +++
Sbjct: 646 FEEALQVFVRM-----LRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSER 700
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V SLI +Y K G + F M+++ ++++ MI+G + HG G EAL +F EM
Sbjct: 701 EVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVC 760
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+ P+ V +VGVLSACSH GLV EGL F+ M + +VP +HY CVVDL+GRAG L
Sbjct: 761 GIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDR 820
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A+E I+ MPI + ++WR+LLSA +H N+EIGE AA +L ++ + YVL+SN+YA
Sbjct: 821 AMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAV 880
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
+++W R M G+ + PG S +EV V+ F + D+ HP + IYE I + +
Sbjct: 881 SRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRR 940
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
GY D +L + ++ +K HS+KLAIAF L+ L PIR+ +NLR+CNDC
Sbjct: 941 TSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDC 1000
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H + K +S I R IIVRD RFH F G CSC+D+W
Sbjct: 1001 HNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 189/379 (49%), Gaps = 8/379 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L ++ F+ ++H V+KWGF + + LVA + S + A IF ++
Sbjct: 266 SVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSR--KLISAERIFSTMN 323
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N+LI G V++ + AL L+ +M ++PD T +L ACA + AL +GMQ
Sbjct: 324 SRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ 383
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H H K G D+ ++ SL+++Y KC VE A F + +++ W+ ++ A+
Sbjct: 384 LHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDN 443
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
S+ ++F +M E P + S+L CT LGAL LG+ H +I+ LNV V +
Sbjct: 444 LSDSFEIFRQMQMEGMI-PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L L + R + + ++++ MI+G H EAL +F EM G++
Sbjct: 503 VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D++ + +SAC+ + +G + + ++ L R G + EA
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQ-SYAAGFGADLSINNALISLYARCGRIQEAYLA 621
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+ + +N++ W SL+S
Sbjct: 622 FEKIG-DKNNISWNSLVSG 639
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 185/391 (47%), Gaps = 20/391 (5%)
Query: 37 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK C K+VH+ +GF +P A+ L+ S G ++ A +F I
Sbjct: 165 VLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDL--YSKNGYIESAKKVFNCIC 222
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G + EEA+ L+ +M + P + ++ A K+Q + G Q
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H V K GF + +V N L+ +Y + K+ A IF M+ + S++++I+ G
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
L+LF +M + C +P+ + S+LSAC +GAL G H I+ + ++I+E
Sbjct: 343 SDRALELFTKMQRD-CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEG 401
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+D+Y KC +E F + + ++VM+ ++ IF +M EG+ P
Sbjct: 402 SLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--VVDLMGRAGMLG 387
+ Y +L C+ G + G ++ ++ T + Y C ++D+ + G L
Sbjct: 462 NQFTYPSILRTCTSLGALYLG------EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLA 515
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
AL +++ +P ++DVV + + A V H++
Sbjct: 516 LALRILRRLP--EDDVVSWTAMIAGYVQHDM 544
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 7/335 (2%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E +R Q L +L+ C +L E ++H + K GF P +LV H G
Sbjct: 51 ERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN-YFRH-GD 108
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
A +F + F +N +I FV + + L+ M G+ P+ +TF + KA
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168
Query: 141 CAKLQ-ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C A Q+H F GF+ V N LI++Y K +E A +F + K + +
Sbjct: 169 CVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVT 228
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W A+I+ + NGL E + LF +M+ + + P +L SVLSA T + +LG+ H +
Sbjct: 229 WVAMISGLSQNGLEEEAILLFCDMHASEIF-PTPYVLSSVLSASTKIQLFELGEQLHCLV 287
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+ V L+ +Y + L +F M + ++Y+ +ISGL G AL
Sbjct: 288 IKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRAL 347
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+F++M R+ L+PD + +LSAC+ G +++G+
Sbjct: 348 ELFTKMQRDCLKPDCITVASLLSACASVGALHKGM 382
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
L N M ERGV + + L + C +L E M++H + K GF+ + + +SL++ Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+ A +F + +SV SW+ +I + + LF M E P
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGI-TPNGYTFA 163
Query: 238 SVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VL AC A + K H + +V LID+Y K G +E +F +
Sbjct: 164 GVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
K +T+ MISGL+ +G +EA+ +F +M + P V VLSA + L G
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 327/574 (56%), Gaps = 6/574 (1%)
Query: 35 LTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ ILK C +L K +VHA + G + + L+ GS++ A IF +
Sbjct: 133 MIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRM--YGKCGSINEARRIFDNL 190
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +I + + +EA L +M + G +P+ T+ ++ ACA ALK
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H H G E D+ V +L+ MY K ++ A +F +M + V SW+ +I A A +G
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E LF +M E C +P+ + +S+L+AC GAL+ K H + + ++V V
Sbjct: 311 RGHEAYDLFLQMQTEGC-KPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVG 369
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+ MY K G ++ +F M + ++++ MISGLA HG G++AL +F M G++
Sbjct: 370 TALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK 429
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V +V VLSACSHAGLV+EG + M Y I P V H C+VDL+GRAG L EA
Sbjct: 430 PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKL 489
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I +M + ++ W +LL + + + N+E+GE+ AK +++ + + YVLLSN+YA A +
Sbjct: 490 FIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGK 549
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W V+ +RT M +G+ + PG S +EV K++ F+ D SHP I E ++ ++K
Sbjct: 550 WDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKA 609
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY PD VL++ + +K + HS+KLAI + L+H G+PIR+ +NLR+C DCH
Sbjct: 610 EGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGA 669
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS + REIIVRD RFH FKDG CSC DYW
Sbjct: 670 TKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 198/384 (51%), Gaps = 8/384 (2%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +LK C K+L K+VH ++K N +NL+ G + A +F +
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV--YIECGRLQEARCVFDAL 89
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N +I G+V+ E+A+ L+ EM GV+P+ T+ + KACA L ALK G
Sbjct: 90 VKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGK 149
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H + G E D+ V +L+ MYGKC + A IF + + SW+ +I A+A +G
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E +L +M E ++P VS+L+AC GAL K H + L+V V
Sbjct: 210 NGKEAYRLMLQMEQEG-FKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVG 268
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+ MY K G ++ +F M + ++++VMI A HG+G EA +F +M EG +
Sbjct: 269 TALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCK 328
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD ++++ +L+AC+ AG + E + R L+ + V+ +V + ++G + +A
Sbjct: 329 PDAIMFLSILNACASAGAL-EWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARV 387
Query: 392 LIQSMPIQQNDVVWRSLLSASKVH 415
+ M + +N V W +++S H
Sbjct: 388 VFDRMKV-RNVVSWNAMISGLAQH 410
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 158/305 (51%), Gaps = 5/305 (1%)
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
EA+ + +RG+ D+F + + K C K + L Q+H + K E + V N+
Sbjct: 9 LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L+++Y +C +++ A +F + +KS ASW+A+IA + + + ++LF EM +E +P
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV-QP 127
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ +L AC L AL GK H + +V V T+L+ MY KCG + + +F
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ + ++++VMI A G GKEA + +M +EG +P+ + YV +L+AC+ G +
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGAL- 246
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLS 410
+ + R L+ + V+ +V + ++G + +A + M ++ DVV W ++
Sbjct: 247 KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR--DVVSWNVMIG 304
Query: 411 ASKVH 415
A H
Sbjct: 305 AFAEH 309
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/636 (36%), Positives = 349/636 (54%), Gaps = 66/636 (10%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++L +CKNL ++H +K+G + + L+ CA+S ++ YA + EP
Sbjct: 1 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 60
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKL--------- 144
AF FNTL+RG+ + E ++ ++ EM +G V PD+F+F + KA
Sbjct: 61 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 120
Query: 145 --QALKEGMQIH--------------------GHVFKVGFECDLFVQNSLINM------- 175
QALK G++ H VF + +L N++I
Sbjct: 121 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 180
Query: 176 ------------------------YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Y K ++E A IF +M + SWS +I A NG
Sbjct: 181 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 240
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
++E F E+ P E L VLSAC+ G+ + GK HG + + + V V
Sbjct: 241 SFNESFLYFRELQRAGM-SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVN 299
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADK-CQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LIDMY +CG + +F M +K C ++++ MI+GLAMHGQG+EA+ +F+EM G+
Sbjct: 300 NALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 359
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD + ++ +L ACSHAGL+ EG F MK Y I P ++HYGC+VDL GR+G L +A
Sbjct: 360 TPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAY 419
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I MPI +VWR+LL A H N+E+ E + L +++ ++ D VLLSN YA A
Sbjct: 420 DFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAG 479
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W DVA IR M + + ++ +SLVEV + +YKF + ++ +E + ++ +LK
Sbjct: 480 KWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLK 539
Query: 511 FE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
E GY+P+++ L DV+E+EK +++ HS+KLA+AFAL LS+G+ IRI +NLR+C DCH
Sbjct: 540 DEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCH 599
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KL S +Y EI+VRDR RFH FKDG+CSCRDYW
Sbjct: 600 AVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/619 (35%), Positives = 339/619 (54%), Gaps = 22/619 (3%)
Query: 3 RTSVLHQSLLLTQPEEPPKGPELNLRLKEQE------------CLTILKTCKNLEEFKKV 50
+ +V +LL +E +NL K Q+ LT ++E ++V
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQV 262
Query: 51 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFV 107
H+ V+K F WN F VA L + D A +F ++ E +N LI
Sbjct: 263 HSFVVKCNFVWNVF-----VANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCA 317
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
EE+L L+ E+ + F F L A L+ G QIH ++
Sbjct: 318 WNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVL 377
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSL++MY KC+K A+ IF + +S W+A+I+ + GL + LKLF EM+ K
Sbjct: 378 VGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAK 437
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ + S+L AC +L +L LGK H +IR+ NV ++L+DMY KCG +++
Sbjct: 438 IG-ADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEA 496
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
L +F+ M + ++++ +IS A +G G AL F +M+ GL+P+ V ++ +L ACSH
Sbjct: 497 LQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHC 556
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV EGL F+ M Y++ P +HY +VD++ R+G EA +L+ MP + ++++W S
Sbjct: 557 GLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSS 616
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L++ ++H N E+ AA LF + + YV +SN+YA A W V K++ + +G
Sbjct: 617 ILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERG 676
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ +K + F + D SHP I + ++E Q++ +GY PD + L +VD
Sbjct: 677 IRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVD 736
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+ K E LK HS+++AIAFALI +GSPI + +NLR CNDCH K+IS I REI VR
Sbjct: 737 EEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVR 796
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F DG+CSC+DYW
Sbjct: 797 DSSRFHHFTDGSCSCKDYW 815
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 187/371 (50%), Gaps = 7/371 (1%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPF-CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
+++ E +VH HV+K G+ C S L + C S+ AC +F+ + E FN
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTR---SLGLACHLFKHMAEKDNVTFN 209
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
L+ G+ KE +A+ L+ +M + G P FTF A+ A ++ ++ G Q+H V K
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKC 269
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
F ++FV N+L++ Y K +++ A +F +M + S++ +I A NG E L+LF
Sbjct: 270 NFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELF 329
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
E+ + R + ++LS + L++G+ H I + V+V SL+DMY K
Sbjct: 330 RELQFTRFDR-RQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAK 388
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
C + +F +A + + ++ +ISG G ++ L +F EM R + D Y +
Sbjct: 389 CDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASI 448
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L AC++ + G R+ + + V +VD+ + G + EAL++ Q MP+ +
Sbjct: 449 LRACANLASLTLGKQLHSRI-IRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPV-R 506
Query: 401 NDVVWRSLLSA 411
N V W +L+SA
Sbjct: 507 NSVSWNALISA 517
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 163/333 (48%), Gaps = 3/333 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A S+F + + + LI G+ + F EA L+ +M G+ PD+ T L
Sbjct: 87 GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ +++ E Q+HGHV KVG++ L V NSL++ Y K + A +FK M +K
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+++A++ ++ G + + LF +M + +RP E +VL+A + ++ G+ H
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKM-QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSF 265
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+++ NV V +L+D Y K + + LF M + ++Y+V+I+ A +G+ +E+
Sbjct: 266 VVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEES 325
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F E+ + + +LS +++ + G + + + V +VD
Sbjct: 326 LELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQ-AIVTDAISEVLVGNSLVD 384
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ + GEA + + Q+ V W +L+S
Sbjct: 385 MYAKCDKFGEANRIFADLA-HQSSVPWTALISG 416
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 51/341 (14%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++ N++I Y K + A ++F M Q+SV +W+ +I +A + + E LF +M
Sbjct: 72 NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
P+ L ++LS T +++ HG +++ ++V SL+D Y K L
Sbjct: 132 RHG-MVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA- 343
LF+ MA+K +T++ +++G + G +A+++F +M G P + + VL+A
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAG 250
Query: 344 ------------------CSHA--GLVNEGLLCF----DRM----KLEYRIVPTVQ--HY 373
C+ V LL F DR+ KL Y + P V Y
Sbjct: 251 IQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEM-PEVDGISY 309
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQND---VVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
++ G + E+LEL + + + D + +LLS + NLE+G Q
Sbjct: 310 NVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGR-------Q 362
Query: 431 INSH----HPSDYVLLSN----MYARAQRWYDVAKIRTEMA 463
I+S VL+ N MYA+ ++ + +I ++A
Sbjct: 363 IHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLA 403
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
THL DLG L + NVI ++I Y+K G L LF M + +T++
Sbjct: 51 THLQRGDLGAAR--KLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWT 108
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKL 362
++I G A H + EA ++F++M R G+ PD + +LS + VNE +K+
Sbjct: 109 MLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKV 168
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
Y T+ ++D + LG A L + M ++++V + +LL+
Sbjct: 169 GYD--STLMVCNSLLDSYCKTRSLGLACHLFKHMA-EKDNVTFNALLTG 214
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/605 (36%), Positives = 346/605 (57%), Gaps = 42/605 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C LE+ + KV+ + G N S LV ++D A +F DE
Sbjct: 241 VISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDM--YMKCNAIDIAKRLF---DE 295
Query: 94 PGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
GA + N + +V++ +EAL + N M + G+ PD + + +C++L+ + G
Sbjct: 296 YGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWG 355
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
HG+V + GFE + N+LI+MY KC + + A IF +M K+V +W++I+A + N
Sbjct: 356 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIEN 415
Query: 211 G-------------------------------LWSECLKLFGEMNNEKCWRPEESILVSV 239
G ++ E +++F M +++C + ++S+
Sbjct: 416 GEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSI 475
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
SAC HLGALDL K + + +N L+V + T+L+DM+ +CG E + +F + ++
Sbjct: 476 ASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 535
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++ I +AM G + A+ +F+EM+ +GL+PD VV++G L+AC H GLV +G F+
Sbjct: 536 SAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNS 595
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M+ + + P HYGC+VDL+GRAG+L EAL+LI+ MP + NDV+W SLL+A +V N+E
Sbjct: 596 MEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVE 655
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+ AA+ + + YVLLSN+YA A RW D+AK+R M KGL + PG S++++
Sbjct: 656 MAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIR 715
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
K ++F S D SHP I M+ ++ + G+ PD+S VL DVDE EK L HS+
Sbjct: 716 GKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSE 775
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLA+AF LI ++G+ IRI +NLR+C+ CH++ K S +Y REII+RD RFH + G C
Sbjct: 776 KLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKC 835
Query: 600 SCRDY 604
SC D+
Sbjct: 836 SCSDF 840
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 207/438 (47%), Gaps = 36/438 (8%)
Query: 7 LHQS-LLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFC 65
LH S ++L P P + R K + LK CK ++E K H + K G +
Sbjct: 8 LHFSPMVLAISTSKPSLPNQSKRTKATP--SSLKNCKTIDELKMFHLSLTKQGLDDDVSA 65
Query: 66 ASNLVA-TCALSHWGSMDYACSIFRQIDEPGA-FDFNTLIRGFVKEVEFEEALFLYNEMF 123
+ LVA +C L S+ +A +F + G F +N+LIRG+ +EA+ L+ M
Sbjct: 66 ITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMM 125
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
G+ PD +TFP CAK + G+QIHG + K+ + DLFVQNSL++ Y +C +++
Sbjct: 126 NSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELD 185
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F +M +++V SW+++I +A + + LF M ++ P +V V+SAC
Sbjct: 186 CARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISAC 245
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
L L+ G+ + + + +N ++ ++L+DMY+KC ++ LF +
Sbjct: 246 AKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCN 305
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNE 352
M S G KEAL + + M+ G+ PD + + +S+CS H ++
Sbjct: 306 AMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRN 365
Query: 353 GLLCFD--------------RMKLEYRIV-----PTVQHYGCVVDLMGRAGMLGEALELI 393
G +D R +RI TV + +V G + A E
Sbjct: 366 GFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETF 425
Query: 394 QSMPIQQNDVVWRSLLSA 411
+MP ++N V W +++SA
Sbjct: 426 NTMP-EKNIVSWNTIISA 442
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 179/386 (46%), Gaps = 47/386 (12%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H ++K + + F ++LV A G +D A +F ++ E + ++I G+ +
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYA--ECGELDCARKVFDEMSERNVVSWTSMICGYAR 211
Query: 109 EVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++A+ L+ M + V P++ T + ACAKL+ L+ G +++ + G E +
Sbjct: 212 REFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDL 271
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ ++L++MY KC ++ A +F + ++ +A+ + + GL E L + M +
Sbjct: 272 MISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSG 331
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC------ 281
RP+ ++S +S+C+ L + GK HG ++RN + +LIDMY+KC
Sbjct: 332 I-RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 390
Query: 282 --------------------GCLEKGLC-----LFRMMADKCQLTYSVMISGLAMHGQGK 316
G +E G F M +K ++++ +IS L +
Sbjct: 391 FRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYE 450
Query: 317 EALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCF-----DRMKLEYRIVPTV 370
EA+ +F M +E + D V + + SAC H G ++ + +R++L+ R+ T
Sbjct: 451 EAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTT- 509
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSM 396
+VD+ R G A+ + S+
Sbjct: 510 -----LVDMFSRCGDPESAMSIFNSL 530
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/624 (35%), Positives = 339/624 (54%), Gaps = 55/624 (8%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL C +L+ + K+VH + ++ G F + F + L+ A + G M+ A +F +
Sbjct: 231 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALID--AYAKCGLMENAVKVFNMM 288
Query: 92 DEPGAFDFNTLIRGFVKEVEFE-----------------------------------EAL 116
+ +N ++ G+ + F+ EAL
Sbjct: 289 EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 348
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV----------GFECDL 166
++ +M G P+ T ++ ACA L A +GM+IH + K G + DL
Sbjct: 349 NVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL 408
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V N+LI+MY KC + A +IF +++++V +W+ +I HA G ++ LKLF EM
Sbjct: 409 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 468
Query: 225 NEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKC 281
+E P + +L AC HL A+ +GK H ++R+ + V LI+MY KC
Sbjct: 469 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKC 528
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +F M+ K ++++ M++G MHG+G EAL IF +M + G PDD+ ++ VL
Sbjct: 529 GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 588
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
ACSH G+V++GL FD M +Y + P +HY +DL+ R G L +A + ++ MP++
Sbjct: 589 YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPT 648
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
VVW +LLSA +VH N+E+ E A L ++N+ + Y L+SN+YA A RW DVA+IR
Sbjct: 649 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 708
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M G+ + PG S V+ + F DRSHP IY ++ + ++K GY P+ +
Sbjct: 709 MKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFA 768
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DVDE+EK L HS+KLA+A+ L+ G PIRI +NLR+C DCH+ IS I +
Sbjct: 769 LHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDH 828
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD RFH FK+G+CSC YW
Sbjct: 829 EIVVRDPSRFHHFKNGSCSCGGYW 852
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 166/310 (53%), Gaps = 13/310 (4%)
Query: 63 PFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
PF + + T ++ + G+ DYA + ++ A +N LIR +K+ + A+ +
Sbjct: 46 PFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 105
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
M G D+FT P + KAC +L + + G HG + GFE ++F+ N+L+ MY +C
Sbjct: 106 CRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 180 EKVEFASAIFKQMDQKS---VASWSAIIAAHA-SNGLWSECLKLFGEMN---NEKCWRPE 232
+E AS IF ++ Q+ V SW++I++AH S+ W+ L LF +M +EK
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA-LDLFSKMTLIVHEKPTNER 224
Query: 233 ESIL--VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
I+ V++L AC L A+ K HG+ IRN + L+V V +LID Y KCG +E + +
Sbjct: 225 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKV 284
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F MM K ++++ M++G + G K A +F M +E + D V + V++ S G
Sbjct: 285 FNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 344
Query: 351 NEGLLCFDRM 360
+E L F +M
Sbjct: 345 HEALNVFRQM 354
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 349/637 (54%), Gaps = 68/637 (10%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFW-NPFCAS--NLVATCA--------------- 74
+L +C + L+ +K+H+ V+K G P S N+ A C
Sbjct: 147 NVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK 206
Query: 75 -LSHW----------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
+S W G + A S F ++ + +N++I G+ ++ EAL ++++M
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKML 266
Query: 124 -ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
E ++PDNFT ++ ACA L+ L G QIH ++ + E V N+LI+MY K V
Sbjct: 267 NEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGV 326
Query: 183 EFAS---------------------------------AIFKQMDQKSVASWSAIIAAHAS 209
E A IF ++ + V +W+A+I +
Sbjct: 327 EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ 386
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NGLW++ L+LF M NE P L ++LS + L L+ GK H S I+ +
Sbjct: 387 NGLWNDALELFRLMVNEGP-EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +LI MY K G + +F + K ++ +++ MI LA HG GKEA+++F ML
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PD + YVGVLSAC+H GLV +G ++ M + I PT+ HY C++DL GRAG+L E
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A I+SMPI+ +++ W SLL++ K+H N ++ ++AA+ L I+ + Y+ L+N+Y+
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
+W + A+ R M +G+ + G S + + +V+ F +D HP D IY+++ ++ +
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEE 685
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K G+ PD VL D++E+ K + LK HS+KLAIAF L++ + + +RI +NLR+CNDC
Sbjct: 686 IKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDC 745
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H+ K IS + REIIVRD RFH FKDG+CSCRDYW
Sbjct: 746 HSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 194/465 (41%), Gaps = 102/465 (21%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ VH ++K G + +NL+ A + GS+ +A +F ++ F +NTLI G+
Sbjct: 30 RSVHCQIIKKGLHLGVYLMNNLMTFYAKT--GSLRFAHHVFDEMPLKSTFSWNTLISGYA 87
Query: 108 KEVEFE-------------------------------EALFLYNEMFERGVEPDNFTFPA 136
K+ FE A++++ +M V P FT
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC----------------- 179
+ +CA Q L G +IH V K+G + V SL+NMY KC
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 180 --------------EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+ E A++ F++M + + SW+++I+ ++ G E L +F +M N
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR------------------------ 261
E +P+ L S+LSAC +L L++GK H ++R
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 262 ---------NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
S LN+I TSL+D Y K G ++ +F + D+ + ++ MI G +
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQ 371
G +AL +F M+ EG EP+ +LS S ++ G + +K P+V
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ ++ + + G + A + +P + ++V W S++ A H
Sbjct: 448 N--ALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 65/295 (22%)
Query: 123 FERGVEPDNFTFPA-LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
E G P + F A + + +++ G +H + K G +++ N+L+ Y K
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 182 VEFASAIFKQMDQKSV-------------------------------ASWSAIIAAHASN 210
+ FA +F +M KS SW+AII +
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL+ + +F +M +E+ P + + +VLS+C LD+G+ H +++ V V
Sbjct: 121 GLFDNAIWMFAKMISERV-PPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPV 179
Query: 271 ETSLIDMYVKC-------------------------------GCLEKGLCLFRMMADKCQ 299
TSL++MY KC G E F M D+
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEG 353
++++ MISG + G EAL IFS+ML E L+PD+ +LSAC++ +N G
Sbjct: 240 VSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 21 KGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
+GPE N L++ + LE K++HA +K G P + L+A A + G+
Sbjct: 403 EGPEPN-SYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT--GN 459
Query: 81 MDYACSIFRQIDEPGA----FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
++ A +F D P + ++I + +EA+ L+ M G++PD+ T+
Sbjct: 460 INVAKRVF---DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVG 516
Query: 137 LFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMD-Q 194
+ AC + +++G + + + +V E L +I++YG+ ++ A + M +
Sbjct: 517 VLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIE 576
Query: 195 KSVASWSAIIAA 206
+W +++A+
Sbjct: 577 PDNIAWGSLLAS 588
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/547 (39%), Positives = 313/547 (57%), Gaps = 41/547 (7%)
Query: 96 AFDFNTLIRGF----VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+F +N LIR V+ F AL LY M V PD TFP L ++ + G
Sbjct: 24 SFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQS---INTPHRGR 80
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+H + +G D FVQ SLINMY C FA F ++ Q + SW+AII A+A G
Sbjct: 81 QLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAG 140
Query: 212 LWSECLKLFGEM--NNEKCW-------------------------------RPEESILVS 238
+ KLF +M N W RP E + S
Sbjct: 141 MIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSS 200
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADK 297
VLSAC LGAL GK H + + ++V++ TSLIDMY KCG +E+ C+F + +K
Sbjct: 201 VLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEK 260
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+ +S MI+ +MHG +E L +F+ M+ +G+ P+ V +V VL AC H GLV+EG F
Sbjct: 261 DVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYF 320
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
RM EY + P +QHYGC+VDL RAG + +A +++SMP++ + ++W +LL+ +++H +
Sbjct: 321 KRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGD 380
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E EIA L +++ + S YVLLSN+YA+ RW +V +R M +G+ + PG SLVE
Sbjct: 381 VETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPGCSLVE 440
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V + +F + D SHP N+Y M+ ++ +L+ GY + +VL D+DE+ K L H
Sbjct: 441 VDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNTGEVLLDLDEEGKEFALSLH 500
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLAIA+ + S G+ IRI +NLR+C+DCH K+IS + REIIVRD RFH FK+G
Sbjct: 501 SEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKEFNREIIVRDCNRFHHFKNG 560
Query: 598 TCSCRDY 604
CSC+DY
Sbjct: 561 LCSCKDY 567
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 157/342 (45%), Gaps = 44/342 (12%)
Query: 15 QPEEPPKGPELNLRLKEQECLT-------ILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS 67
P PP L LR++ L +L++ +++HA +L G +PF +
Sbjct: 41 NPAFPP-ALSLYLRMRLHAVLPDLHTFPFLLQSINTPHRGRQLHAQILLLGLANDPFVQT 99
Query: 68 NLV---ATCA----------------LSHW----------GSMDYACSIFRQIDEPGAFD 98
+L+ ++C L W G + A +F Q+ E
Sbjct: 100 SLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVIS 159
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFE---RGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
++ +I G+V E++ AL L+ + + P+ FT ++ ACA+L AL+ G +H
Sbjct: 160 WSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHA 219
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAAHASNGLWS 214
++ K G + D+ + SLI+MY KC +E A IF + +K V +WSA+I A + +GL
Sbjct: 220 YIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSE 279
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS- 273
ECL+LF M N+ RP V+VL AC H G + G ++ +I
Sbjct: 280 ECLELFARMVNDGV-RPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGC 338
Query: 274 LIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQ 314
++D+Y + G +E + + M + + + +++G +HG
Sbjct: 339 MVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGD 380
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 14/199 (7%)
Query: 27 LRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGS 80
LR E ++L C L + K VHA++ K G + ++L+ A C GS
Sbjct: 191 LRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKC-----GS 245
Query: 81 MDYACSIFRQI-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
++ A IF + E ++ +I F EE L L+ M GV P+ TF A+
Sbjct: 246 IERAKCIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLC 305
Query: 140 ACAKLQALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSV 197
AC + EG + + + G + ++++Y + ++E A + K M + V
Sbjct: 306 ACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDV 365
Query: 198 ASWSAIIAAHASNGLWSEC 216
W A++ +G C
Sbjct: 366 MIWGALLNGARIHGDVETC 384
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/549 (39%), Positives = 324/549 (59%), Gaps = 12/549 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH HV+K GF + + ++L+ A + + A +F + +N +I G+VK
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHLYA--NGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKR 79
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
E +++ M R D ++ + A + + E ++ F E +L
Sbjct: 80 GEMGHTRMVFDRMVCR----DVISWNTIINGYAIVGKIDEAKRL----FDEMPERNLVSW 131
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
NS+++ + KC VE A +F +M + V SW++++A +A G +E L LF +M
Sbjct: 132 NSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV- 190
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P E+ +VS+LSAC HLGALD G H + N +N IV T+L+DMY KCG +
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M K L ++ +I+G+A+HG KEA +F EM +EP+D+ +V +LSACSHAG+
Sbjct: 251 VFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGM 310
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V+EG D M Y I P V+HY CV+DL+ RAG+L EA+ELI +MP++ N +LL
Sbjct: 311 VDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALL 370
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
++H N E+GE+ K L + H Y+LLSN+YA A++W D K+R M G+++
Sbjct: 371 GGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISK 430
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDED 528
PG S++E+ V++FV+ D SHP + IY+ ++++ +LK GYS D VL D++E+
Sbjct: 431 VPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGYSADTGNVLLDMEEE 490
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
+K L HS+KLAIA+ L+HL IRI +NLR+C DCH TKLIS +Y REIIVRDR
Sbjct: 491 DKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDR 550
Query: 589 KRFHRFKDG 597
RFH F+DG
Sbjct: 551 NRFHHFEDG 559
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 157/319 (49%), Gaps = 18/319 (5%)
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
T+P + KAC + G+ +H HV K GFECD ++ NSLI++Y + + A +F
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGAL 249
+ V SW+A+I + G +F M + W ++++ +G +
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWN-------TIINGYAIVGKI 113
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
D K L + N++ S++ +VKCG +E+ LF M + ++++ M++
Sbjct: 114 DEAK----RLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACY 169
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
A G+ EAL++F +M G++P + V +LSAC+H G +++GL + + RI
Sbjct: 170 AQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYIN-DNRIEVN 228
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNL 428
+VD+ + G + A ++ +M + DV+ W ++++ +H +++ + K +
Sbjct: 229 SIVGTALVDMYAKCGKISLATQVFNAM--ESKDVLAWNTIIAGMAIHGHVKEAQQLFKEM 286
Query: 429 FQINSHHPSDYVLLSNMYA 447
+ S P+D ++ + A
Sbjct: 287 KEA-SVEPNDITFVAMLSA 304
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/586 (37%), Positives = 340/586 (58%), Gaps = 8/586 (1%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
+ NL+ E ++IL L K++HA+ +K N + L+ S
Sbjct: 206 DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDM--YSKCCC 263
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ YA +F ++ + T+I + + EAL L ++ +G++ D + A
Sbjct: 264 VAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLA 323
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C+ L+ L ++HG+ K G DL +QN +I++Y C + +A+ +F+ + K V SW
Sbjct: 324 CSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSW 382
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+++I+ + NGL +E L +F M E P+ LVS+LSA L AL+ GK HG +
Sbjct: 383 TSMISCYVHNGLANEALGVFYLMK-ETSVEPDSITLVSILSAAASLSALNKGKEIHGFIF 441
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
R L SL+DMY CG LE +F K + ++ MI+ MHG+GK A+
Sbjct: 442 RKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVE 501
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+FS M + L PD + ++ +L ACSH+GL+NEG + MK +Y++ P +HY C+VDL+
Sbjct: 502 LFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLL 561
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRA L EA ++SM I+ VW + L A ++H N ++GEIAA+ L ++ P YV
Sbjct: 562 GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYV 621
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
L+SN++A + RW DV ++R M GL ++PG S +EV KV+ F+ +D+SHP IY+
Sbjct: 622 LISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQ 681
Query: 501 MIHQMEWQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ Q+ +L+ E GY P VL +V ++EK + L GHS++LAIA+ L+ S+G+PIRI
Sbjct: 682 KLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRIT 741
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCHT+ KL+S +ERE+IVRD RFH F+DG CSC D+W
Sbjct: 742 KNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDFW 787
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 209/417 (50%), Gaps = 23/417 (5%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C +E+ + +H ++K G+ F A++LV+ A + + A +F +++E
Sbjct: 16 VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCN--DILGARKLFDRMNE 73
Query: 94 PG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I + + EAL L+ EM + GV + +T A +AC K GM+
Sbjct: 74 RNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGME 133
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH + K D++V N+L+ M+ + K+ +A+ IF ++D+K +W+++IA NGL
Sbjct: 134 IHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGL 193
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++E L+ F + + +P+E L+S+L+A LG L GK H ++N N+ +
Sbjct: 194 YNEALQFFCGLQDAN-LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGN 252
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LIDMY KC C+ +F M +K ++++ +I+ A + EAL + ++ +G++
Sbjct: 253 TLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDV 312
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY-----RIVPTVQHYGCVVDLMGRAGMLG 387
D ++ L ACS GL C K + R + + ++D+ G +
Sbjct: 313 DTMMIGSTLLACS-------GLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNIN 365
Query: 388 EALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
A + +S I+ DVV W S++S VH+ L + L + S P L+S
Sbjct: 366 YATRMFES--IKCKDVVSWTSMISCY-VHNGLANEALGVFYLMKETSVEPDSITLVS 419
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 207/423 (48%), Gaps = 30/423 (7%)
Query: 38 LKTCKNLEEFKK----VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
L+ C++ FKK +HA +LK + + A+ LVA +G M YA IF ++DE
Sbjct: 119 LQACED-SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHV--RFGKMSYAARIFDELDE 175
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N++I GF + + EAL + + + ++PD + ++ A +L L G +I
Sbjct: 176 KDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI 235
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H + K + +L + N+LI+MY KC V +A +F +M K + SW+ +IAA+A N
Sbjct: 236 HAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCH 295
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG-SLIRNISALNVIVET 272
+E LKL ++ K + ++ S L AC+ L L K HG +L R +S +++++
Sbjct: 296 TEALKLLRKVQT-KGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS--DLMMQN 352
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+ID+Y CG + +F + K ++++ MIS +G EAL +F M +EP
Sbjct: 353 MIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEP 412
Query: 333 DDVVYVGVLSACSHAGLVNE-----GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
D + V +LSA + +N+ G + LE V + +VD+ G L
Sbjct: 413 DSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNS------LVDMYACCGSLE 466
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH---PSDYVLLSN 444
A ++ ++ V+W ++++A +H + AA LF I P L+
Sbjct: 467 NAYKVFICTR-SKSLVLWTTMINAYGMHGRGK----AAVELFSIMEDQKLIPDHITFLAL 521
Query: 445 MYA 447
+YA
Sbjct: 522 LYA 524
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 2/229 (0%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
GV D+FTFP + KAC ++ + G +IHG + K G++ +FV NSL++MY KC + A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 186 SAIFKQMDQKS-VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
+F +M++++ V SW++II+A++ NG E L LF EM LV+ L AC
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGV-GANTYTLVAALQACE 123
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
LG H +++++ L+V V +L+ M+V+ G + +F + +K +T++
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
MI+G +G EAL F + L+PD+V + +L+A G + G
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNG 232
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 321/563 (57%), Gaps = 11/563 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---DYACSIFRQIDEPGAFDFNTLIR 104
K++HA +K G + F V A + D A +F +I E +N I
Sbjct: 128 KQIHALAVKCGRILDVF-----VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYIS 182
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + +EA+ + E G +P++ TF AC+ L GMQ+HG VF+ GF+
Sbjct: 183 NSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDT 242
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+ V N LI+ YGKC+++ + IF +M K+ SW +++AA+ N + L+
Sbjct: 243 DVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E + ++ SVLSAC + L+LG+ H ++ N+ V ++L+DMY KCGC+
Sbjct: 303 KE-IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCI 361
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL--EPDDVVYVGVLS 342
E F M +K +T + +I G A GQ AL++F +M G P+ + +V +LS
Sbjct: 362 EDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLS 421
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACS AG V G+ FD MK Y I P +HY C+VD++GRAGM+ +A E I+ MPI+
Sbjct: 422 ACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTI 481
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
VW +L +A ++H +G +AA+NLF+++ ++VLLSN +A A RW + +R EM
Sbjct: 482 SVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEM 541
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G+ + G+S + V +V+ F ++DRSH I M+ ++ +++ GY PD+ L
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSL 601
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
D++E+EK + HS+KLA+AF L+ L PIRI +NLR+C DCH++ K +S +RE
Sbjct: 602 YDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKRE 661
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFHRFKDG CSC+DYW
Sbjct: 662 IIVRDNNRFHRFKDGICSCKDYW 684
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 171/370 (46%), Gaps = 20/370 (5%)
Query: 50 VHAHVLK-WGFFWNPFCASNLVATCALSHWGSMDYACS---IFRQIDEPGAFDFNTLIRG 105
VHA ++K PF A+ L+ + + +D+ S + R + +L+ G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLI-----NMYSKLDHPESARLVLRLTPARNVVSWTSLVSG 82
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ F ALF + EM GV P++FTFP +FKA A L+ G QIH K G D
Sbjct: 83 LAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+FV S +MY K + A +F ++ ++++ +W+A I+ ++G E ++ F E
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRR 202
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
+P L+AC+ LDLG HG + R+ +V V LID Y KC +
Sbjct: 203 IG-GQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M K +++ +++ + + ++A ++ +E +E D + VLSAC
Sbjct: 262 SSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSAC- 320
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHY----GCVVDLMGRAGMLGEALELIQSMPIQQN 401
AG+ L R + + V+ +VD+ G+ G + ++ + MP ++N
Sbjct: 321 -AGMAG---LELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKN 375
Query: 402 DVVWRSLLSA 411
V SL+
Sbjct: 376 LVTLNSLIGG 385
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/624 (35%), Positives = 339/624 (54%), Gaps = 55/624 (8%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL C +L+ + K+VH + ++ G F + F + L+ A + G M+ A +F +
Sbjct: 124 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALID--AYAKCGLMENAVKVFNMM 181
Query: 92 DEPGAFDFNTLIRGFVKEVEFE-----------------------------------EAL 116
+ +N ++ G+ + F+ EAL
Sbjct: 182 EFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEAL 241
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV----------GFECDL 166
++ +M G P+ T ++ ACA L A +GM+IH + K G + DL
Sbjct: 242 NVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL 301
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V N+LI+MY KC + A +IF +++++V +W+ +I HA G ++ LKLF EM
Sbjct: 302 MVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMI 361
Query: 225 NEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKC 281
+E P + +L AC HL A+ +GK H ++R+ + V LI+MY KC
Sbjct: 362 SEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKC 421
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +F M+ K ++++ M++G MHG+G EAL IF +M + G PDD+ ++ VL
Sbjct: 422 GDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 481
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
ACSH G+V++GL FD M +Y + P +HY +DL+ R G L +A + ++ MP++
Sbjct: 482 YACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPT 541
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
VVW +LLSA +VH N+E+ E A L ++N+ + Y L+SN+YA A RW DVA+IR
Sbjct: 542 AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHL 601
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M G+ + PG S V+ + F DRSHP IY ++ + ++K GY P+ +
Sbjct: 602 MKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFA 661
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DVDE+EK L HS+KLA+A+ L+ G PIRI +NLR+C DCH+ IS I +
Sbjct: 662 LHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDH 721
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD RFH FK+G+CSC YW
Sbjct: 722 EIVVRDPSRFHHFKNGSCSCGGYW 745
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 137/248 (55%), Gaps = 10/248 (4%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G D+FT P + KAC +L + + G HG + GFE ++F+ N+L+ MY +C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 182 VEFASAIFKQMDQKS---VASWSAIIAAHA-SNGLWSECLKLFGEMN---NEKCWRPEES 234
+E AS IF ++ Q+ V SW++I++AH S+ W+ L LF +M +EK
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTA-LDLFSKMTLIVHEKPTNERSD 119
Query: 235 IL--VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
I+ V++L AC L A+ K HG+ IRN + L+V V +LID Y KCG +E + +F
Sbjct: 120 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
MM K ++++ M++G + G K A +F M +E + D V + V++ S G +E
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239
Query: 353 GLLCFDRM 360
L F +M
Sbjct: 240 ALNVFRQM 247
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/637 (34%), Positives = 349/637 (54%), Gaps = 68/637 (10%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFW-NPFCAS--NLVATCA--------------- 74
+L +C + L+ +K+H+ V+K G P S N+ A C
Sbjct: 147 NVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVK 206
Query: 75 -LSHW----------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
+S W G + A S F ++ + +N++I G+ ++ EAL ++++M
Sbjct: 207 NISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKML 266
Query: 124 -ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
E ++PDNFT ++ ACA L+ L G QIH ++ + E V N+LI+MY K V
Sbjct: 267 NEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGV 326
Query: 183 EFAS---------------------------------AIFKQMDQKSVASWSAIIAAHAS 209
E A IF ++ + V +W+A+I +
Sbjct: 327 EIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQ 386
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NGLW++ L+LF M NE P L ++LS + L L+ GK H S I+ +
Sbjct: 387 NGLWNDALELFRLMVNEGP-EPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLRE 328
V +LI MY K G + +F + K ++ +++ MI LA HG GKEA+++F ML
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PD + YVGVLSAC+H GLV +G ++ M + I PT+ HY C++DL GRAG+L E
Sbjct: 506 GMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQE 565
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A I+SMPI+ +++ W SLL++ K+H N ++ ++AA+ L I+ + Y+ L+N+Y+
Sbjct: 566 AYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSA 625
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
+W + A+ R M +G+ + G S + + +V+ F +D HP D IY+++ ++ +
Sbjct: 626 CGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEE 685
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K G+ PD VL D++E+ K + LK HS+KLAIAF L++ + + +RI +NLR+CNDC
Sbjct: 686 IKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDC 745
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H+ K IS + REIIVRD RFH FKDG+CSCRDYW
Sbjct: 746 HSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 194/465 (41%), Gaps = 102/465 (21%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ VH ++K G + +NL+ A + GS+ +A +F ++ F +NTLI G+
Sbjct: 30 RSVHCQIIKKGLHLGVYLMNNLMTFYAKT--GSLRFAHHVFDEMPLKSTFSWNTLISGYA 87
Query: 108 KEVEFE-------------------------------EALFLYNEMFERGVEPDNFTFPA 136
K+ FE A++++ +M V P FT
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC----------------- 179
+ +CA Q L G +IH V K+G + V SL+NMY KC
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 180 --------------EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+ E A++ F++M + + SW+++I+ ++ G E L +F +M N
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR------------------------ 261
E +P+ L S+LSAC +L L++GK H ++R
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 262 ---------NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
S LN+I TSL+D Y K G ++ +F + D+ + ++ MI G +
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQ 371
G +AL +F M+ EG EP+ +LS S ++ G + +K P+V
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ ++ + + G + A + +P + ++V W S++ A H
Sbjct: 448 N--ALIAMYAKTGNINVAKRVFD-LPNGKKEIVSWTSMIMALAQH 489
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 124/295 (42%), Gaps = 65/295 (22%)
Query: 123 FERGVEPDNFTFPA-LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
E G P + F A + + +++ G +H + K G +++ N+L+ Y K
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 182 VEFASAIFKQMDQKSV-------------------------------ASWSAIIAAHASN 210
+ FA +F +M KS SW+AII +
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQF 120
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL+ + +F +M +E+ P + + +VLS+C LD+G+ H +++ V V
Sbjct: 121 GLFDNAIWMFAKMISERV-PPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPV 179
Query: 271 ETSLIDMYVKC-------------------------------GCLEKGLCLFRMMADKCQ 299
TSL++MY KC G E F M D+
Sbjct: 180 ATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEG 353
++++ MISG + G EAL+IFS+ML E L+PD+ +LSAC++ +N G
Sbjct: 240 VSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIG 294
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 21 KGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
+GPE N L++ + LE K++HA +K G P + L+A A + G+
Sbjct: 403 EGPEPN-SYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKT--GN 459
Query: 81 MDYACSIFRQIDEPGA----FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
++ A +F D P + ++I + +EA+ L+ M G++PD+ T+
Sbjct: 460 INVAKRVF---DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVG 516
Query: 137 LFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMD-Q 194
+ AC + +++G + + + +V E L +I++YG+ ++ A + M +
Sbjct: 517 VLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIE 576
Query: 195 KSVASWSAIIAA 206
+W +++A+
Sbjct: 577 PDNIAWGSLLAS 588
>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 565
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/543 (38%), Positives = 322/543 (59%), Gaps = 3/543 (0%)
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
F +SN++ G + A +F ++ + +N +I G ++ EE L L+ EM
Sbjct: 25 FMSSNILIN-GYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMH 83
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
G PD +T ++F A L+++ G QIHG+ K G E DL V +SL +MY + K++
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
+ + M +++ +W+ +I +A NG L L+ M C RP + V+VLS+C
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSC 202
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+ L G+ H I+ ++ V V +SLI MY KCGCL F D+ ++ +S
Sbjct: 203 SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWS 262
Query: 304 VMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
MIS HGQG EA+ +F+ M + +E ++V ++ +L ACSH+GL ++GL FD M
Sbjct: 263 SMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVE 322
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y P ++HY CVVDL+GRAG L +A +I+SMPI+ + V+W++LLSA +H N E+ +
Sbjct: 323 KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQ 382
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
K + +I+ + + YVLL+N++A A+RW DV+++R M K + + G S E +V
Sbjct: 383 KVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEV 442
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F DRS IY + ++ ++K +GY PD + VL D+DE+EK L HS+KLA
Sbjct: 443 HQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLA 502
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+AFAL+ L +G+PIRI +NLR+C+DCH K ISVI REI +RD RFH F +G CSC
Sbjct: 503 VAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCG 562
Query: 603 DYW 605
DYW
Sbjct: 563 DYW 565
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 19/286 (6%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+ N LIN Y + + A +F +M + + +W+A+IA E L LF EM+
Sbjct: 24 NFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMH 83
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ P+E L SV S L ++ +G+ HG I+ L+++V +SL MY++ G L
Sbjct: 84 G-LGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKL 142
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ G + R M + + ++ +I G A +G + L ++ M G P+ + +V VLS+C
Sbjct: 143 QDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC 202
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
S + +G ++ V ++ + + G LG+A + +++V+
Sbjct: 203 SDLAIRGQGQQIHAE-AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVM 260
Query: 405 WRSLLSASKVHHN----------------LEIGEIAAKNLFQINSH 434
W S++SA H +E+ E+A NL SH
Sbjct: 261 WSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSH 306
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+L + N + LI+ YV+ G L +F M D+ T++ MI+GL +E
Sbjct: 15 ALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEE 74
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
LS+F EM G PD+ V S AGL + + + +I YG +
Sbjct: 75 GLSLFREMHGLGFSPDEYTLGSVFSGS--AGLRS--------VSIGQQIHGYAIKYGLEL 124
Query: 378 DLM---------GRAGMLGEALELIQSMPIQQNDVVWRSLL 409
DL+ R G L + +I+SMP+ +N V W +L+
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLI 164
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L +C +L + +++HA +K G S+L++ S G + A F +
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM--YSKCGCLGDAAKAFSER 253
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEG 150
++ ++++I + + +EA+ L+N M E+ +E + F L AC+ +G
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKG 313
Query: 151 MQIHG-HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWSAIIAA 206
+++ V K GF+ L ++++ G+ ++ A AI K M K W +++A
Sbjct: 314 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSA 371
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/513 (39%), Positives = 303/513 (59%), Gaps = 2/513 (0%)
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P + LI ++ EA+ + F G+ PD+FT + ACA++ L+ G +
Sbjct: 4 PSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEAV 63
Query: 154 HGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+ G +FV + +++Y KC ++E A ++F +M + +W A++ +ASNG
Sbjct: 64 WAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGH 123
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L LF M E +P+ +V LSACT LGALDLG+ G + + N ++ T
Sbjct: 124 PREALDLFFAMQMEGA-KPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGT 182
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LIDMY KCG + +F+ M ++ + ++ MI GL M G K A ++ +M + G++
Sbjct: 183 ALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGVKL 242
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+D ++G+L +C+H GLVN+G F M YRI P ++HYGC+VDL RAG+L EA +L
Sbjct: 243 NDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAHQL 302
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I MP+ N VVW +LL K+H N ++ E A K L ++ + +YV+LSN+Y+ + RW
Sbjct: 303 IGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSGRW 362
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
D AK+R EM +KG+ + P S VE+ KV+KF D SHP D IY + ++ ++K
Sbjct: 363 EDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDKIYAKLDELGMEMKAM 422
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P V+ DV+ +EK L HS+K+AIAF+LI G IR+ +NLR+C DCH+
Sbjct: 423 GYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIRVTKNLRVCTDCHSAI 482
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I REI+VRD RFH F+DG CSC DYW
Sbjct: 483 KLISRITCREIVVRDNNRFHCFRDGHCSCNDYW 515
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 4/219 (1%)
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
M S SW+A+IAA+ G E + + RP+ V VL+AC + L+
Sbjct: 1 MPHPSTVSWTALIAAYMDAGHALEAIGV-ARRAFASGMRPDSFTAVRVLTACARVADLET 59
Query: 252 GKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
G+ + + A +V V T+ +D+YVKCG +EK +F M ++ + + M+ G A
Sbjct: 60 GEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYA 119
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
+G +EAL +F M EG +PD VG LSAC+ G ++ G + + + V
Sbjct: 120 SNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPV 179
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++D+ + G EA + Q M ++++ +VW +++
Sbjct: 180 LGTA-LIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 14/274 (5%)
Query: 67 SNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
S VAT AL + G M+ A S+F ++ A + ++ G+ EAL L+ M
Sbjct: 76 SVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNGHPREALDLFFAMQ 135
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
G +PD +T AC +L AL G Q G V + + +LI+MY KC
Sbjct: 136 MEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGNPVLGTALIDMYAKCGSTS 195
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F+QM ++ + W+A+I G L G+M + ++ + +L +C
Sbjct: 196 EAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV-KLNDNTFIGLLCSC 254
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFR---MMADKC 298
TH G ++ G+ ++ ++ ++ +E ++D++ + G LE+ L M+A+
Sbjct: 255 THTGLVNDGRQYFHNMT-HVYRISPRIEHYGCMVDLFSRAGLLEEAHQLIGDMPMLAN-- 311
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+ + ++ G +H A +++R LEP
Sbjct: 312 AVVWGALLGGCKIHRNADLAEHALKQLIR--LEP 343
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 331/582 (56%), Gaps = 12/582 (2%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L + T++K C N+++ +++H+ VLK GF + L+ A S G + A
Sbjct: 304 LTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMD--AYSKAGQLGNAL 361
Query: 86 SIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
IF + + +I G ++ + A L++ M E GV P++FT+ + A +
Sbjct: 362 DIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA--SV 419
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+L QIH V K +EC V +L+ Y K E A +IFK +DQK V SWSA++
Sbjct: 420 ASLPP--QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAML 477
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC-THLGALDLGKCTHGSLIRNI 263
+A G +F +M +P E + SV+ AC + +DLG+ H I++
Sbjct: 478 TCYAQAGDSDGATNIFIKMTMHG-LKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHR 536
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+ V ++L+ MY + G +E C+F D+ ++++ M+SG A HG ++AL +F
Sbjct: 537 CHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFR 596
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M EG+E D V ++ V+ C+HAGLV EG FD M +Y I PT++HY C+VDL RA
Sbjct: 597 QMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRA 656
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA+ LI+ M +VWR+LL A KVH N+E+G++AA+ L + + YVLLS
Sbjct: 657 GKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLS 716
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+Y+ A +W + ++R M +K + + G S +++ KV+ F++ D+SHP + IY +
Sbjct: 717 NIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLR 776
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
M +LK EGY PD S L +V E++K L HS++LA+AF LI G+P+ I +NLR
Sbjct: 777 AMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLR 836
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT K++S I +REI++RD RFH F G CSC D+W
Sbjct: 837 VCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 2/267 (0%)
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
W S+ +F + + + +L+ G++++ + + L+ M GV P++ TF ++
Sbjct: 152 WHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASV 211
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
A + G ++H K G +FV NSL+NMY KC VE A +F M+ + +
Sbjct: 212 LSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDM 271
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+ ++A NG E L+LF + + +S +V+ C ++ L L + H
Sbjct: 272 VSWNTLMAGLVLNGHDLEALQLFHD-SRSSITMLTQSTYATVIKLCANIKQLGLARQLHS 330
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGK 316
S+++ V T+L+D Y K G L L +F +M+ + ++++ MI+G +G
Sbjct: 331 SVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVP 390
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSA 343
A ++FS M +G+ P+D Y +L+A
Sbjct: 391 LAAALFSRMREDGVAPNDFTYSTILTA 417
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 11/281 (3%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFE-CDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+ K C + G Q+HG + G + D+ V SL++MY K V +F+ M +
Sbjct: 108 GVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK 167
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
++V +W++++ + +G S+ ++LF M E W P SVLS G +DLG+
Sbjct: 168 RNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVW-PNSVTFASVLSVVASQGMVDLGRR 226
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H ++ V V SL++MY KCG +E+ +F M + ++++ +++GL ++G
Sbjct: 227 VHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGH 286
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
EAL +F + Y V+ C+ N L R + YG
Sbjct: 287 DLEALQLFHDSRSSITMLTQSTYATVIKLCA-----NIKQLGLARQLHSSVLKRGFHSYG 341
Query: 375 CV----VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
V +D +AG LG AL++ M QN V W ++++
Sbjct: 342 NVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMING 382
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISA 265
HA G + L F +++ R LV VL C + LGK HG IR
Sbjct: 77 HARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDR 136
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+V V TSL+DMY+K + G +F M + +T++ +++G G + + +F M
Sbjct: 137 GDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRM 196
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
EG+ P+ V + VLS + G+V+ G + +++ TV ++++ + G+
Sbjct: 197 RAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQ-SVKFGCCSTVFVCNSLMNMYAKCGL 255
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVH-HNLE 419
+ EA + M ++ V W +L++ ++ H+LE
Sbjct: 256 VEEARVVFCGMET-RDMVSWNTLMAGLVLNGHDLE 289
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 333/562 (59%), Gaps = 8/562 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+ E K+VH H+ G+ F + L+ + ++ A +F ++ E + T+I
Sbjct: 301 VREGKRVHRHIFSNGYHPKTFLTNILINMYV--KFNLLEEAQVLFDKMPERNVVSWTTMI 358
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ + A+ L MF GV P+ FTF ++ +AC +L LK Q+H + KVG E
Sbjct: 359 SAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLK---QLHSWIMKVGLE 415
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+FV+++LI++Y K ++ A +F++M W++IIAA A + E L L+ M
Sbjct: 416 SDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSM 475
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ ++S L SVL ACT L L+LG+ H +++ L I+ +L+DMY KCG
Sbjct: 476 R-RVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDL--ILNNALLDMYCKCGS 532
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
LE +F MA K +++S MI+GLA +G EAL++F M +G +P+ + +GVL A
Sbjct: 533 LEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFA 592
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSHAGLVNEG F M Y I P +HYGC++DL+GRA L + ++LI M + + V
Sbjct: 593 CSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVV 652
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
WR+LL A + N+++ AAK + +++ YVLLSN+YA ++RW DVA++R M
Sbjct: 653 TWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMK 712
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
+G+ + PG S +EV ++++ F+ D+SHP D I ++Q +L GY PD + VL+
Sbjct: 713 KRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQ 772
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++ +++ + L+ HS+KLAI F ++ + IRI +NL++C DCH + KLI+ + +R I
Sbjct: 773 DLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHI 832
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
++RD R+H F+DG CSC DYW
Sbjct: 833 VIRDPIRYHHFQDGVCSCGDYW 854
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 123/243 (50%), Gaps = 4/243 (1%)
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ A+ + + M RGV D+ T+ L K C A++EG ++H H+F G+ F+ N
Sbjct: 265 DLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTN 324
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
LINMY K +E A +F +M +++V SW+ +I+A+++ L ++L M +
Sbjct: 325 ILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGV-M 383
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P SVL AC L L K H +++ +V V ++LID+Y K G L + L +
Sbjct: 384 PNMFTFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKV 440
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
FR M + ++ +I+ A H G EAL ++ M R G D VL AC+ L+
Sbjct: 441 FREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLL 500
Query: 351 NEG 353
G
Sbjct: 501 ELG 503
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 319/565 (56%), Gaps = 9/565 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
L +++HA LK NP ++L+ A C L H A +F ++ P +
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLH-----RAQRVFDEMPHPSTVPWT 141
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
LI ++ + EA+ + F G+ PD+FT + ACA++ L G + +
Sbjct: 142 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 201
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G +FV + +++Y KC ++ A +F +M K +W A++ +ASNG E L LF
Sbjct: 202 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 261
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M E +P+ + LSACT LGALDLG+ + + N ++ T+LIDMY K
Sbjct: 262 LAMQAEGM-KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 320
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + +F+ M K + ++ MI GL M G K A ++ +M + G++ +D ++G+
Sbjct: 321 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 380
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L +C+H GL+ +G F M Y I P ++HYGC+VDL+ RAG+L EA +L+ MP+
Sbjct: 381 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 440
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N V+ +LL K+H N E+ E K L + + +YV+LSN+Y+ RW D AK+R
Sbjct: 441 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 500
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
+M +KG+ + P S VE KV++F D+SHP D IY+ + ++ ++K GY P
Sbjct: 501 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 560
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
V+ DV+++EK L HS+KLAIAF L+ G IR+ +NLR+C+DCHT KL+S I
Sbjct: 561 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 620
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH F+DG+CSC DYW
Sbjct: 621 REIIVRDNNRFHCFRDGSCSCNDYW 645
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 6/283 (2%)
Query: 129 PDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P + T P K+ ++L L+ G Q+H K+ + V SL+++Y KC + A
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F +M S W+A+I A+ G E + + RP+ V VL+AC +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHV-ARNAFANGMRPDSFTAVRVLTACARIA 186
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L G+ + + A +V V T+ +D+YVKCG + K +F M K + + M+
Sbjct: 187 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 246
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRI 366
G A +G +EAL +F M EG++PD G LSAC+ G ++ G + E+
Sbjct: 247 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G EA + Q M +++ +VW +++
Sbjct: 307 NPVLG--TALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMI 346
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 333/572 (58%), Gaps = 4/572 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+T + TC ++ + +H V+K + + F LV++ G A +F ++ +
Sbjct: 45 ITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYV--ELGCTKDALELFDELPDK 102
Query: 95 GAFDFNTLIRGFVKEVEFEEAL-FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+LI GF + + L L+ FE G++P+ T + ACA + L G I
Sbjct: 103 DLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCI 162
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG K G ++ V NSLIN+YGKC +E A +F+ M +S+ SW++++A H GL
Sbjct: 163 HGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLA 222
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ + F M +++ +VS+L AC +LG L + HG ++ N+ + T+
Sbjct: 223 EKGIGYFIMMRRAGI-NSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATA 281
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+D+Y K G L +F M + + ++ M+S AMHG+G+EA+ F M+REG+ PD
Sbjct: 282 LLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPD 341
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V + +LSACSH+GLV EG F M Y + V+HY C+VDL+GR+G L +A +LI
Sbjct: 342 HVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLI 401
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+SMP++ N VW +L+ A +V N+E+G+ A+ LF ++ +Y+ LSNMY+ A +W
Sbjct: 402 KSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWR 461
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
D +K+R M + L ++PG S +E K++ FV D+SHP + IY + ++ + + G
Sbjct: 462 DASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVG 521
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
++ VL DVDE+ K + + HS+KLAIAF L+ + G P+ I +N+R+C DCH + K
Sbjct: 522 FASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAK 581
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS+I +R II+RD KRFH F +G CSC DYW
Sbjct: 582 LISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 10/213 (4%)
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
S L++ +S C+ ++ + H +I++++ + + L+ YV+ GC + L LF
Sbjct: 42 SALITAISTCS---SISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDE 98
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNE 352
+ DK ++++ +ISG + L + M E GL+P++V + V+SAC+ G ++
Sbjct: 99 LPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDV 158
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G C + ++ ++ V+ +++L G+ G L A L + M + Q+ V W S++ A
Sbjct: 159 G-KCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSV-QSLVSWNSMV-AV 215
Query: 413 KVHHNLE---IGEIAAKNLFQINSHHPSDYVLL 442
VH L IG INS + LL
Sbjct: 216 HVHMGLAEKGIGYFIMMRRAGINSDQATVVSLL 248
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/592 (36%), Positives = 334/592 (56%), Gaps = 18/592 (3%)
Query: 22 GPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
GPE+ + +L C + L E ++VHAH++K + + + L L +
Sbjct: 46 GPEIGFHCYD----ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRL-----LIFY 96
Query: 79 GSMD---YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
G D A + ++ E + +I + + EAL ++ EM +P+ FTF
Sbjct: 97 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFA 156
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ +C + L G QIHG + K ++ +FV +SL++MY K ++E A IF+ + ++
Sbjct: 157 TVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPER 216
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V S +AIIA +A GL E L++F + +E RP S+L+A + L LD GK
Sbjct: 217 DVVSCTAIIAGYAQLGLDEEALEMFQRLQSEG-MRPNYVTYASLLTALSGLALLDHGKQA 275
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H ++R +++ SLIDMY KCG L LF M ++ ++++ M+ G + HG G
Sbjct: 276 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLG 335
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHY 373
+E L +F M E ++PD V + VLS CSH + + GL +D M EY I P +HY
Sbjct: 336 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHY 395
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
GC+VD++GRAG + EA E I+ MP + V SLL A +VH +++IGE L +I
Sbjct: 396 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEP 455
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
+ +YV+LSN+YA A RW DV +R M K + + PG S ++ + ++ F + DR+HP
Sbjct: 456 ENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 515
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
+ + + ++ ++K GY PDIS VL DVDE++K + L GHS+KLA+ F LI +G
Sbjct: 516 RREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEG 575
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+C DCH + K+ S ++ERE+ +RD+ RFH+ G CSC DYW
Sbjct: 576 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 159/305 (52%), Gaps = 8/305 (2%)
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
+EAL EM G E + AL AC +AL+EG ++H H+ K + +++
Sbjct: 35 LQEALL---EMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTR 91
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L+ YGKC+ +E A + +M +K+V SW+A+I+ ++ G SE L +F EM +P
Sbjct: 92 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSD-GKP 150
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
E +VL++C L LGK HG +++ ++ V +SL+DMY K G +E+ +F
Sbjct: 151 NEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIF 210
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ ++ ++ + +I+G A G +EAL +F + EG+ P+ V Y +L+A S L++
Sbjct: 211 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLD 270
Query: 352 EGLLCF-DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
G ++ E +Q+ ++D+ + G L A L +MP ++ + W ++L
Sbjct: 271 HGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYAQRLFDNMP-ERTAISWNAMLV 327
Query: 411 ASKVH 415
H
Sbjct: 328 GYSKH 332
>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 316/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + +N +I G ++ EE L L+ EM G PD +T ++F
Sbjct: 124 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 183
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A L+++ G QIHG+ K G E DL V +SL +MY + K++ + + M +++
Sbjct: 184 SGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 243
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I +A NG L L+ M C RP + V+VLS+C+ L G+ H
Sbjct: 244 AWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQIHAE 302
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I+ ++ V V +SLI MY KCGCL F D+ ++ +S MIS HGQG EA
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 362
Query: 319 LSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
+ +F+ M + +E ++V ++ +L ACSH+GL ++GL FD M +Y P ++HY CVV
Sbjct: 363 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 422
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L +A +I+SMPI+ + V+W++LLSA +H N E+ + K + QI+ + +
Sbjct: 423 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 482
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLL+N++A A+RW DV+++R M K + + G S E +V++F DRS
Sbjct: 483 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKE 542
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ ++K +GY PD + VL D+DE+EK L HS+KLA+AFAL+ L +G+PIR
Sbjct: 543 IYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIR 602
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C+DCH K ISVI REI +RD RFH F +G CSC DYW
Sbjct: 603 IIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 168/397 (42%), Gaps = 55/397 (13%)
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
CS+ + P + D T I + EA + F + + F ++C
Sbjct: 3 CSV-SSVVRPLSVDPATAIATLCSKGNLREAF----QRFRLNIFTNTSLFTPFIQSCTTR 57
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMY-------------GKCEKVEFASA---- 187
Q+L G Q+H + GF D F+ N L++MY G+ K + S+
Sbjct: 58 QSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILI 117
Query: 188 --------------IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
+F +M + + +W+A+IA E L LF EM+ + P+E
Sbjct: 118 NGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG-FSPDE 176
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
L SV S L ++ +G+ HG I+ L+++V +SL MY++ G L+ G + R
Sbjct: 177 YTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRS 236
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + + ++ +I G A +G + L ++ M G P+ + +V VLS+CS + +G
Sbjct: 237 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQG 296
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
++ V ++ + + G LG+A + +++V+W S++SA
Sbjct: 297 QQIHAE-AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYG 354
Query: 414 VH----------------HNLEIGEIAAKNLFQINSH 434
H N+EI E+A NL SH
Sbjct: 355 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 391
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L +C +L + +++HA +K G S+L++ S G + A F +
Sbjct: 281 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM--YSKCGCLGDAAKAFSER 338
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEG 150
++ ++++I + + +EA+ L+N M E+ +E + F L AC+ +G
Sbjct: 339 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398
Query: 151 MQIHG-HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS-VASWSAIIAA 206
+++ V K GF+ L ++++ G+ ++ A AI + M K+ + W +++A
Sbjct: 399 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/583 (36%), Positives = 326/583 (55%), Gaps = 16/583 (2%)
Query: 38 LKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVAT-CAL----SHWGSMDYAC---- 85
LK+C L +HA L+ G F + F A+ L+ C L SH MD +
Sbjct: 65 LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124
Query: 86 ---SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
+F ++ E +NTL+ G + EAL L EM+ G +PD+FT ++ A
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ ++ GM++HG + GF D+FV +SLI+MY C + +++ +F + + W++
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++A A NG E L LF M + +P S++ AC +L +L LGK H +IR
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGI-KPMPVTFSSLIPACGNLASLLLGKQLHAYVIRG 303
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
NV + +SLIDMY KCG + +F + ++++ MI G A+HG +EAL +F
Sbjct: 304 GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLF 363
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
M L+P+ + ++ VL+ACSHAGLV++G F+ M Y IVP+++H+ + D +GR
Sbjct: 364 DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
G L EA I M I+ VW +LL A KVH N + E AK +F + +++L
Sbjct: 424 PGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIIL 483
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN Y+ + RW + A +R M KG+ + P S +EV K + FV+ D+SHP ++ I + +
Sbjct: 484 SNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDAL 543
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+ Q+ +GY P+ V +D++E++K L GHS+KLAI F +I G+ IR+ +NL
Sbjct: 544 NVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNL 603
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCHT TK IS I REI++RD RFH FKDG CSC D+W
Sbjct: 604 RVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 23/264 (8%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDN------FTFPALFKACAKLQALKEGMQIHGH 156
IR + +F A+ L+ M R +P + P K+CA L G +H
Sbjct: 26 IRVAASQGDFHHAIALFLRM--RASDPAAACSSVLTSLPGALKSCAALGLRALGASLHAL 83
Query: 157 VFKVGFECDLFVQNSLINMY--------------GKCEKVEFASAIFKQMDQKSVASWSA 202
+ G D F N+L+N+Y G +E +F +M +K V SW+
Sbjct: 84 ALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNT 143
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ A +G E L L EM + C +P+ L SVL + G HG RN
Sbjct: 144 LVLGCAESGRHGEALGLVREMWRDGC-KPDSFTLSSVLPIFAEGADVRRGMELHGFATRN 202
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+V V +SLIDMY C + + +F + + + ++ M++G A +G EAL +F
Sbjct: 203 GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLF 262
Query: 323 SEMLREGLEPDDVVYVGVLSACSH 346
ML G++P V + ++ AC +
Sbjct: 263 RRMLHSGIKPMPVTFSSLIPACGN 286
>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 316/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + +N +I G ++ EE L L+ EM G PD +T ++F
Sbjct: 37 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 96
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A L+++ G QIHG+ K G E DL V +SL +MY + K++ + + M +++
Sbjct: 97 SGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 156
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I +A NG L L+ M C RP + V+VLS+C+ L G+ H
Sbjct: 157 AWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQIHAE 215
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I+ ++ V V +SLI MY KCGCL F D+ ++ +S MIS HGQG EA
Sbjct: 216 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 275
Query: 319 LSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
+ +F+ M + +E ++V ++ +L ACSH+GL ++GL FD M +Y P ++HY CVV
Sbjct: 276 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 335
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L +A +I+SMPI+ + V+W++LLSA +H N E+ + K + QI+ + +
Sbjct: 336 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 395
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLL+N++A A+RW DV+++R M K + + G S E +V++F DRS
Sbjct: 396 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKE 455
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ ++K +GY PD + VL D+DE+EK L HS+KLA+AFAL+ L +G+PIR
Sbjct: 456 IYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIR 515
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C+DCH K ISVI REI +RD RFH F +G CSC DYW
Sbjct: 516 IIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 23/309 (7%)
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+KL + ++G + K + N LIN Y + + A +F +M + + +W+
Sbjct: 3 SKLGDFPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 58
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+IA E L LF EM+ + P+E L SV S L ++ +G+ HG I+
Sbjct: 59 AMIAGLIQFEFNEEGLSLFREMHGLG-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 117
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
L+++V +SL MY++ G L+ G + R M + + ++ +I G A +G + L +
Sbjct: 118 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 177
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
+ M G P+ + +V VLS+CS + +G ++ V ++ +
Sbjct: 178 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE-AIKIGASSVVAVVSSLISMYS 236
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH----------------HNLEIGEIAA 425
+ G LG+A + +++V+W S++SA H N+EI E+A
Sbjct: 237 KCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 295
Query: 426 KNLFQINSH 434
NL SH
Sbjct: 296 LNLLYACSH 304
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L +C +L + +++HA +K G S+L++ S G + A F +
Sbjct: 194 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM--YSKCGCLGDAAKAFSER 251
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEG 150
++ ++++I + + +EA+ L+N M E+ +E + F L AC+ +G
Sbjct: 252 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 311
Query: 151 MQIHG-HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS-VASWSAIIAA 206
+++ V K GF+ L ++++ G+ ++ A AI + M K+ + W +++A
Sbjct: 312 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 369
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/572 (35%), Positives = 332/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L+TC E +++H +K GF + + + L+ S +G +D A I ++
Sbjct: 351 LLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDM--YSKYGWLDKARRILEVLEA 408
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ ++I G+V+ +EAL + +M G+ PDN + ACA ++A+++G QI
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQI 468
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V+ G+ D+ + N+L+N+Y +C + + A ++F+ ++ K +W+ +++ A +GL+
Sbjct: 469 HSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLY 528
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L++F +M + VS +SA +L + GK H ++I+ V +
Sbjct: 529 EEALEVFIKMYQAGV-KYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANA 587
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI +Y KCG +E F M+++ ++++ +I+ + HG G EAL +F +M +EGL+P+
Sbjct: 588 LISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPN 647
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV ++GVL+ACSH GLV EGL F M E+ I P HY CVVD++GRAG L A + +
Sbjct: 648 DVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFV 707
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ MP+ N +VWR+LLSA +VH N+EIGE+AAK L ++ H + YVLLSN YA +W
Sbjct: 708 EEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWA 767
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+R M +G+ + PG S +EV V+ F DR HP IY+ + ++ +L G
Sbjct: 768 CRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIG 827
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y + + ++++K HS+KLA+AF L+ L P+R+ +NLR+CNDCHT+ K
Sbjct: 828 YIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMK 887
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S + REI++RD RFH F +G CSC D+W
Sbjct: 888 FTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 229/514 (44%), Gaps = 46/514 (8%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALS---HWGSMDYACSIFR 89
++L C E+ + VHA V K G C+ +V ++ +GS+ A +F
Sbjct: 148 SVLSACTKAALFEQGRLVHAQVYKQGS-----CSETVVGNALIALYLRFGSLSLAERVFS 202
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ FNTLI + E AL ++ EM G PD T +L ACA + L +
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H ++ K G D ++ SL+++Y KC + A IFK D+ +V W+ ++ A+
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
++ LF +M RP E +L CT+ G ++LG+ H I+ ++
Sbjct: 323 ISDLAKSFDLFCQMVAAGV-RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMY 381
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V LIDMY K G L+K + ++ K ++++ MI+G H KEAL F +M G
Sbjct: 382 VSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFG 441
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PD++ +SAC+ + +G R+ + V + +V+L R G EA
Sbjct: 442 IWPDNIGLASAISACAGIKAMRQGQQIHSRVYVS-GYSADVSIWNALVNLYARCGRSKEA 500
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L +++ ++ + W ++S E ++Q + + + +S++ A A
Sbjct: 501 FSLFEAIE-HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKY-NVFTFVSSISASA 558
Query: 450 QRWYDVAKIR-----------------TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSH 492
++A I+ TE+A+ ++ +E A+ + F +R+H
Sbjct: 559 ----NLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQF-FEMSERNH 613
Query: 493 PAWDNIYEMIHQMEW---------QLKFEGYSPD 517
+W+ I Q W Q+K EG P+
Sbjct: 614 VSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPN 647
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 199/410 (48%), Gaps = 35/410 (8%)
Query: 24 ELNLRLKEQECLTI---LKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCA 74
E+ L +C+TI L C +L + K++H+++LK G + +L+ C
Sbjct: 234 EMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKC- 292
Query: 75 LSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
G + A IF+ D +N ++ + + + ++ L+ +M GV P+ FT+
Sbjct: 293 ----GVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTY 348
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
P L + C + G QIH K GFE D++V LI+MY K ++ A I + ++
Sbjct: 349 PCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEA 408
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
K V SW+++IA + + E L+ F +M W P+ L S +SAC + A+ G+
Sbjct: 409 KDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIW-PDNIGLASAISACAGIKAMRQGQQ 467
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H + + + +V + +L+++Y +CG ++ LF + K ++T++ M+SG A G
Sbjct: 468 IHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGL 527
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+EAL +F +M + G++ + +V +SA ++ + +G +I TV G
Sbjct: 528 YEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQG----------KQIHATVIKTG 577
Query: 375 C---------VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
C ++ L G+ G + +A M ++N V W +++++ H
Sbjct: 578 CTSETEVANALISLYGKCGSIEDAKMQFFEMS-ERNHVSWNTIITSCSQH 626
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 168/338 (49%), Gaps = 5/338 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F Q+ + ++ G+ + EEA+ LY++M GV P + ++
Sbjct: 91 GLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVL 150
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC K ++G +H V+K G + V N+LI +Y + + A +F +M
Sbjct: 151 SACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRV 210
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+++ +I+ HA G L++F EM W P+ + S+L+AC +G L+ GK H
Sbjct: 211 TFNTLISRHAQCGNGESALEIFEEMRLSG-WTPDCVTIASLLAACASIGDLNKGKQLHSY 269
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ + + I+E SL+D+YVKCG + + L +F+ + +++M+ ++
Sbjct: 270 LLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKS 329
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+F +M+ G+ P++ Y +L C++AG +N G + ++ + G ++D
Sbjct: 330 FDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQ-IHLLSIKTGFESDMYVSGVLID 388
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
+ + G L +A +++ + + DVV W S+++ H
Sbjct: 389 MYSKYGWLDKARRILEVL--EAKDVVSWTSMIAGYVQH 424
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGMQI 153
A N + GF+ + E+ L L+ + + F + C ++ I
Sbjct: 5 AAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVI 64
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H G D N LI++Y K V+ A +F+Q+ + SW A+++ +A NGL
Sbjct: 65 HAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLG 124
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E + L+ +M+ P +L SVLSACT + G+ H + + S +V +
Sbjct: 125 EEAVGLYHQMHCSGV-VPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI +Y++ G L +F M ++T++ +IS A G G+ AL IF EM G PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V +L+AC+ G +N+G + L+ + P G ++DL + G++ EALE+
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYL-LKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 394 QSMPIQQNDVVWRSLLSA 411
+S + N V+W +L A
Sbjct: 303 KSGD-RTNVVLWNLMLVA 319
>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 565
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 316/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + +N +I G ++ EE L L+ EM G PD +T ++F
Sbjct: 39 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 98
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A L+++ G QIHG+ K G E DL V +SL +MY + K++ + + M +++
Sbjct: 99 SGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 158
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I +A NG L L+ M C RP + V+VLS+C+ L G+ H
Sbjct: 159 AWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQIHAE 217
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I+ ++ V V +SLI MY KCGCL F D+ ++ +S MIS HGQG EA
Sbjct: 218 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 277
Query: 319 LSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
+ +F+ M + +E ++V ++ +L ACSH+GL ++GL FD M +Y P ++HY CVV
Sbjct: 278 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 337
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L +A +I+SMPI+ + V+W++LLSA +H N E+ + K + QI+ + +
Sbjct: 338 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 397
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLL+N++A A+RW DV+++R M K + + G S E +V++F DRS
Sbjct: 398 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKE 457
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ ++K +GY PD + VL D+DE+EK L HS+KLA+AFAL+ L +G+PIR
Sbjct: 458 IYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIR 517
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C+DCH K ISVI REI +RD RFH F +G CSC DYW
Sbjct: 518 IIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 23/309 (7%)
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+KL + ++G + K + N LIN Y + + A +F +M + + +W+
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+IA E L LF EM+ + P+E L SV S L ++ +G+ HG I+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLG-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
L+++V +SL MY++ G L+ G + R M + + ++ +I G A +G + L +
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
+ M G P+ + +V VLS+CS + +G ++ V ++ +
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAE-AIKIGASSVVAVVSSLISMYS 238
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH----------------HNLEIGEIAA 425
+ G LG+A + +++V+W S++SA H N+EI E+A
Sbjct: 239 KCGCLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 426 KNLFQINSH 434
NL SH
Sbjct: 298 LNLLYACSH 306
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L +C +L + +++HA +K G S+L++ S G + A F +
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM--YSKCGCLGDAAKAFSER 253
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEG 150
++ ++++I + + +EA+ L+N M E+ +E + F L AC+ +G
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 151 MQIHG-HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS-VASWSAIIAA 206
+++ V K GF+ L ++++ G+ ++ A AI + M K+ + W +++A
Sbjct: 314 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/498 (39%), Positives = 302/498 (60%), Gaps = 1/498 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F + + +NT+I G + E+AL + EM + PD+FT ++ A+
Sbjct: 152 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 211
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L +G +IHG+ + G++ D+F+ +SLI+MY KC +V+ + +F + Q SW++IIA
Sbjct: 212 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAG 271
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
NG++ E LK F +M K +P S++ AC HL L LGK HG +IR+
Sbjct: 272 CVQNGMFDEGLKFFQQMLIAKI-KPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV + ++L+DMY KCG + +F M ++++ MI G A+HG +A+S+F M
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 390
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
EG++P+ V ++ VL+ACSHAGLV+E F+ M +YRI+P ++HY V DL+GR G L
Sbjct: 391 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 450
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
EA E I M I+ VW +LL+A +VH N+E+ E +K LF ++ + YVLLSN+Y
Sbjct: 451 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 510
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
+ A RW D K+R M KG+ + P S +E+ KV+ FV+ D+SHP +D I E + +
Sbjct: 511 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 570
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
Q++ EGY D ++VL DV+E++KR L HS++LAI F +I G+ IR+ +NLR+C
Sbjct: 571 EQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCV 630
Query: 567 DCHTYTKLISVIYEREII 584
DCHT TK IS I REI+
Sbjct: 631 DCHTATKFISKIVGREIV 648
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 120/219 (54%), Gaps = 9/219 (4%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
L I NL + K++H + ++ G+ + F S+L+ A C +D +C +F +
Sbjct: 203 LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCT-----RVDDSCRVFYML 257
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +N++I G V+ F+E L + +M ++P++ +F ++ ACA L L G
Sbjct: 258 PQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGK 317
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+HG++ + F+ ++F+ ++L++MY KC + A IF +M+ + SW+A+I +A +G
Sbjct: 318 QLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHG 377
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+ + LF M E +P ++VL+AC+H G +D
Sbjct: 378 HAYDAISLFKRMEVEGV-KPNYVAFMAVLTACSHAGLVD 415
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 23/223 (10%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G PD+ FP++ K+C ++ L+ G +HG + ++G DL+ N+L+NMY K
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 182 VEFASAIFKQMDQK---SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
+E + + D K + I S+ L E + ++ +IL
Sbjct: 61 LE-EGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQ 119
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
V T+ D GK + +V + Y+ G L K +F MM +
Sbjct: 120 V---NTYKKVFDEGKTS-----------DVYSKKEKESYYL--GSLRK---VFEMMPKRD 160
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
++++ +ISG A +G ++AL + EM L PD VL
Sbjct: 161 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 203
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/557 (37%), Positives = 318/557 (57%), Gaps = 4/557 (0%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH + +K G + + L++ S G MD A +F ++D P +N LI G+
Sbjct: 234 VHGYGVKCGLAEHEHVVTGLMSL--YSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVN 291
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
E ++ L+ E+ G P++ T A+ + +H V K + D V
Sbjct: 292 GMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVS 351
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
+L +Y + +E A +IF M +K++ SW+A+I+ +A NGL + LF ++ E
Sbjct: 352 TALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALF-QLMQELNV 410
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P + S LSAC HLGAL LGK H + + LNV V T+LIDMY KCG + +
Sbjct: 411 QPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARS 470
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M +K ++++ MISG +HGQG EAL ++ +ML + P ++ V+ ACSH GL
Sbjct: 471 IFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGL 530
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ-NDVVWRSL 408
V+EG F M EYRI P ++H C+VDL+GRAG L EALELI P VW +L
Sbjct: 531 VDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGAL 590
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A VH N ++ ++A++ LF+++S + YVLLSN+Y + + + A +R E ++ L
Sbjct: 591 LGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLV 650
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
++PG +L+E+ + + F++ D HP + IY + ++ ++ GY P L DV+E+
Sbjct: 651 KTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEE 710
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK +K HS+KLAIAF L+ G+ IRI +NLR+C DCH TK IS + +R I+VRD
Sbjct: 711 EKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDA 770
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+DG CSC DYW
Sbjct: 771 SRFHHFRDGVCSCGDYW 787
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 180/374 (48%), Gaps = 20/374 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +H + G+ + F AS L G D A +F + P +NTL+ G
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRG--DDARKVFDTVPSPDTILWNTLLAGLP 191
Query: 108 KEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
EAL + M + G V PD+ T + +A A+ + G +HG+ K G
Sbjct: 192 GS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHE 247
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
V L+++Y KC ++ A +F +MD + +++A+I+ ++ NG+ ++LF E+
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
WRP S LV+V+ + G L +C H +++ + +V T+L +Y + +E
Sbjct: 308 G-WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M +K +++ MISG A +G + A+++F M ++P+ + LSAC+H
Sbjct: 367 ARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAH 426
Query: 347 AGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
G ++ G ++ ++++L ++ ++D+ + G + EA + M +N
Sbjct: 427 LGALSLGKWVHRIISKEKLELNVYVMT------ALIDMYAKCGSIAEARSIFDRMD-NKN 479
Query: 402 DVVWRSLLSASKVH 415
V W +++S +H
Sbjct: 480 VVSWNAMISGYGLH 493
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 160/385 (41%), Gaps = 57/385 (14%)
Query: 129 PDNFTFPALFKACAKLQAL-------KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
PD+F+F F A + + +HG G+ D FV ++L +Y K +
Sbjct: 107 PDSFSFA--FAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSR 164
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+ A +F + W+ ++A SE L+ F M + RP+ + L S L
Sbjct: 165 GDDARKVFDTVPSPDTILWNTLLAGLPG----SEALEAFVRMVDAGRVRPDSTTLASSLR 220
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
A + +G+C HG ++ A + V T L+ +Y KCG ++ LF M + +
Sbjct: 221 AAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVA 280
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV-----------LSACSHA--- 347
Y+ +ISG +++G + ++ +F E+ G P+ V V L+ C HA
Sbjct: 281 YNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVV 340
Query: 348 -------GLVNEGLLCF---------DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL- 390
LV+ L R + + T++ + ++ + G+ A+
Sbjct: 341 KARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVA 400
Query: 391 --ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE----IAAKNLFQINSHHPSDYVL--L 442
+L+Q + +Q N + S LSA L +G+ I +K ++N YV+ L
Sbjct: 401 LFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNV-----YVMTAL 455
Query: 443 SNMYARAQRWYDVAKIRTEMASKGL 467
+MYA+ + I M +K +
Sbjct: 456 IDMYAKCGSIAEARSIFDRMDNKNV 480
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 326/572 (56%), Gaps = 4/572 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + L + K +HA+ ++ FF N + L+ A H + YA IF +++
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHL--LFYARKIFNTVNKK 274
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQI 153
++ +I G+V +AL LY++M G+ P T + +ACA+L LK G ++
Sbjct: 275 NDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKL 334
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H H+ K G + D V NSLI+MY KC ++ A +M K S+SAII+ NG
Sbjct: 335 HCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYA 394
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L +F +M + P ++++L AC+HL AL G C HG + + + +
Sbjct: 395 EKALLIFRQMQSSGI-APYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNA 453
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
+IDMY KCG + +F M ++ ++++ MI G +HG EALS+F E+ GL+PD
Sbjct: 454 IIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPD 513
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV + VLSACSH+GLV EG F M + I P + HY C+VDL+ RAG L EA I
Sbjct: 514 DVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFI 573
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
Q MP N +W +LL+A + H N+E+GE +K + + ++VL+SN+Y+ RW
Sbjct: 574 QRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWD 633
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
D A IR+ G +SPG S VE++ ++ F+ +SHP +I + + ++ Q+K G
Sbjct: 634 DAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLG 693
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y D S VL DV+E+EK + L HS+K+AIAF +++ S S I + +NLR+C DCH+ K
Sbjct: 694 YRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIK 753
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I+++ EREI VRD RFH FKDG C+C+D+W
Sbjct: 754 FITLLTEREITVRDASRFHHFKDGICNCQDFW 785
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 170/330 (51%), Gaps = 10/330 (3%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F QI +P +N +IR + F+++++LY M + GV P NFTFP L KAC+ LQA
Sbjct: 63 VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAII 204
L+ G IH H +G DL+V +L++MY KC + A +F + + + +W+A+I
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
AA + + L ++ + +M P S LVS+L AL GK H IRN
Sbjct: 183 AAFSFHALHAQTIHSVAQMQQAGV-TPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFF 241
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
NV+++T+L+DMY KC L +F + K + +S MI G +H +AL+++ +
Sbjct: 242 FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDD 301
Query: 325 ML-REGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
ML GL P +L AC+ + G L C +K + TV + ++ +
Sbjct: 302 MLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC-HMIKSGMDLDTTVGN--SLISMYA 358
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G++ A+ + M I ++ V + +++S
Sbjct: 359 KCGIMDNAVGFLDEM-IAKDTVSYSAIISG 387
>gi|297820424|ref|XP_002878095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323933|gb|EFH54354.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 651
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/568 (36%), Positives = 330/568 (58%), Gaps = 4/568 (0%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K + + +L+ C ++ + +K+H+HV+ G +P ++L+ CA+S GS+ YA +F
Sbjct: 4 KARVIVRMLQGCNSMNKLRKIHSHVIINGLHHHPSIFNHLLRFCAVSVNGSLSYAQLLFD 63
Query: 90 QID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQAL 147
+ D +P +N LIRGF + YN M V PD FTF KAC +++ +
Sbjct: 64 RFDSDPSTSAWNYLIRGFSISSSPLYTILYYNRMLLSSVSRPDIFTFSFALKACERIRLI 123
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ +++HG V + GF D V +L+ Y VE AS +F +M + + SW+A+I+
Sbjct: 124 PKCLELHGSVIRSGFLADAIVSTNLVRCYSANGSVEIASKVFDEMPVRDLVSWNAMISCF 183
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ GL + ++ M NE +I V++LS+C H+ AL++G H +
Sbjct: 184 SHAGLHHQAFSMYSRMANEGVCVDAYTI-VALLSSCAHVSALNMGVMLHRIACDIRCESS 242
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V +LIDMY KCG LE + +F+ M + LT++ MI G +HG G EA+S F +M+
Sbjct: 243 VFVCNALIDMYAKCGSLENAVGVFKGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G+ P+ V ++G+L CSH GLV EG+ F+ M ++ + P V+HYGC+VDL GRAG L
Sbjct: 303 SGVRPNAVTFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLFGRAGQLE 362
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ALE+I + ++ V+WR+LL + K+H NLE+GE+A K L Q+ + + DYVL++++Y+
Sbjct: 363 KALEMIHTSSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 422
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
A A +R + S L PG+S +E+ +V+KFV D+ HP IY + ++
Sbjct: 423 AANDAQGFASMRKLIRSHDLRTIPGWSWIEIGDQVHKFVIDDKMHPESALIYSELGEVIN 482
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERL-KGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+ GY P+ S D E HS+KLAIA+ L+ + G+ +RI +NLR+C
Sbjct: 483 RAILAGYKPEDSNRTAHTLSDRCLESADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 542
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRF 594
DCH++TK +S + REIIVRDR RFH+F
Sbjct: 543 DCHSFTKYVSKAFNREIIVRDRVRFHQF 570
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/527 (40%), Positives = 325/527 (61%), Gaps = 9/527 (1%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
++ A F + E +N ++ G+ + EEAL L++EM G+EPD T+ + A
Sbjct: 210 LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISA 269
Query: 141 CAKL--QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
C+ L + H ++ C FV+ +L++MY K ++ A +F M ++V
Sbjct: 270 CSSRGDPCLAASLVRTLHQKRIQLNC--FVRTALLDMYAKFGDLDSARKLFNTMPGRNVV 327
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+++IA +A NG + ++LF EM K P+E +VSV+SAC HLGAL+LG
Sbjct: 328 TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRF 387
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L N L++ ++I MY +CG +E +F+ MA + ++Y+ +ISG A HG G EA
Sbjct: 388 LTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEA 447
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+++ S M G+EPD V ++GVL+ACSHAGL+ EG F+ +K P + HY C+VD
Sbjct: 448 INLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVD 502
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GR G L +A ++ MP++ + V+ SLL+AS++H +E+GE+AA LF++ + +
Sbjct: 503 LLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGN 562
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
++LLSN+YA A RW DV +IR M G+ ++ G+S VE K++KF+ DRSH D+I
Sbjct: 563 FILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDI 622
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y+++ ++ +++ GY D S VLRDV+E+EK E + HS+KLAI +AL+ G+ IR+
Sbjct: 623 YQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRV 682
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCHT K+IS + R IIVRD RFH F DG CSC+DYW
Sbjct: 683 VKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 729
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 167/383 (43%), Gaps = 54/383 (14%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
E +I N +++HA ++ + + + L+ C Y +F
Sbjct: 3 ELGSIASRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLR-APPHYTHLLFNSTL 61
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P F F +++R + + + + +Y +M GV PD F +P L K+ A G+
Sbjct: 62 NPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS-----AGTGGIG 116
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASN 210
H HV K+G D FV+N++I+MY + + A +F ++ ++ VA W+A+++
Sbjct: 117 FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS----- 171
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G W E + W L + NVI
Sbjct: 172 GYWK------WESEGQAQW-----------------------------LFDVMPERNVIT 196
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+++ Y K LE F M ++ ++++ M+SG A +G +EAL +F EM+ G+
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGI 256
Query: 331 EPDDVVYVGVLSACSHAG--LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
EPD+ +V V+SACS G + L+ R + RI ++D+ + G L
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLV---RTLHQKRIQLNCFVRTALLDMYAKFGDLDS 313
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
A +L +MP +N V W S+++
Sbjct: 314 ARKLFNTMP-GRNVVTWNSMIAG 335
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GSM+ A +F+++ +NTLI GF EA+ L + M E G+EPD TF +
Sbjct: 411 GSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVL 470
Query: 139 KACAKLQALKEGMQI 153
AC+ L+EG ++
Sbjct: 471 TACSHAGLLEEGRKV 485
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/636 (34%), Positives = 342/636 (53%), Gaps = 61/636 (9%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPF---CASNLVATCALSH 77
E R + +L C +L K++H + N F C ++ A C
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC---- 277
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER------------ 125
G MD A ++F + +N ++ G+ + FE+A+ L+ +M E
Sbjct: 278 -GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 126 -----------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
G++P+ T ++ CA + AL G +IH + K +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--Y 394
Query: 163 ECDL---------FVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNG 211
DL V N LI+MY KC+KV+ A A+F + ++ V +W+ +I ++ +G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 212 LWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNI-SALNVI 269
++ L+L EM E C RP + L AC L AL +GK H +RN +A+ +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V LIDMY KCG + +F M K ++T++ +++G MHG G+EAL IF EM R G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ D V + VL ACSH+G++++G+ F+RMK + + P +HY C+VDL+GRAG L A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L LI+ MP++ VVW + LS ++H +E+GE AA+ + ++ S+H Y LLSN+YA A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW DV +IR+ M KG+ + PG S VE + F D++HP IY+++ ++
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY P+ L DVD++EK + L HS+KLA+A+ ++ QG+ IRI +NLR+C DCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T +S I + +II+RD RFH FK+G+CSC+ YW
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 198/425 (46%), Gaps = 53/425 (12%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI--DEPG 95
+ CK + + K +H +L +G S+L++T G + +A S+ R+ + G
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGILTLNL-TSHLIST--YISVGCLSHAVSLLRRFPPSDAG 91
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +N+LIR + + L+L+ M PDN+TFP +FKAC ++ +++ G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
GF ++FV N+L+ MY +C + A +F +M V SW++II ++A G
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L++F M NE RP+ LV+VL C LG LGK H + + N+ V L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 276 DMYVKCGCLEKGLCLFRMMA---------------------------DKCQ--------L 300
DMY KCG +++ +F M+ +K Q +
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFD 358
T+S ISG A G G EAL + +ML G++P++V + VLS C+ G + G + C+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY- 390
Query: 359 RMKLEYRIVPTVQHYG-------CVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLS 410
++Y I +G ++D+ + + A + S+ ++ DVV W ++
Sbjct: 391 --AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 411 ASKVH 415
H
Sbjct: 449 GYSQH 453
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 319/524 (60%), Gaps = 2/524 (0%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKAC 141
YA IF + ++ +I G+V +EAL L+++M + ++P T ++ +AC
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
AKL L G ++H ++ K+G D+ + N+L++MY KC ++ A F +M+ K S+S
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFS 382
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
AI++ NG + L +F M P+ + ++ VL AC+HL AL G C+HG LI
Sbjct: 383 AIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 441
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
A + ++ +LIDMY KCG + +F M ++++ MI G +HG G EAL +
Sbjct: 442 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F ++L GL+PDD+ ++ +LS+CSH+GLV EG L FD M ++ IVP ++H C+VD++G
Sbjct: 502 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 561
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG++ EA I++MP + + +W +LLSA ++H N+E+GE +K + + ++VL
Sbjct: 562 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVL 621
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+Y+ A RW D A IR GL + PG S +E+ V+ FV D+SH I
Sbjct: 622 LSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRK 681
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ ++K GY + S V +DV+E+EK + L HS+KLAIAF +++L G PI + +N
Sbjct: 682 LEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKN 741
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCHT K +++I +REI VRD RFH FK+GTC+C D+W
Sbjct: 742 LRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 164/322 (50%), Gaps = 21/322 (6%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS----- 86
L +L+ C K+L E KK+H H LK ++ + L + +C+
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLK---------NTSNADSSVLHKLTRLYLSCNQVVLA 62
Query: 87 --IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F +I P +N +IR + F+ A+ LY+ M GV P+ +T+P + KAC+ L
Sbjct: 63 RRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGL 122
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
A+++G++IH H G E D+FV +L++ Y KC + A +F M + V +W+A+I
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A + GL + ++L +M E P S +V VL AL GK HG +R
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGIC-PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF 241
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
V+V T L+DMY KC CL +F +M + ++++S MI G KEAL +F +
Sbjct: 242 DNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQ 301
Query: 325 M-LREGLEPDDVVYVGVLSACS 345
M L++ ++P V VL AC+
Sbjct: 302 MILKDAMDPTPVTLGSVLRACA 323
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 186/386 (48%), Gaps = 15/386 (3%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ 90
+LK C L E+ ++H+H +G + F + LV A C G + A +F
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC-----GILVEAQRLFSS 169
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ +N +I G ++A+ L +M E G+ P++ T + + +AL G
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG 229
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+HG+ + F+ + V L++MY KC+ + +A IF M ++ SWSA+I + ++
Sbjct: 230 KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 289
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
E L+LF +M + P L SVL AC L L G+ H +I+ S L++++
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILL 349
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+ MY KCG ++ + F M K +++S ++SG +G ALSIF M G+
Sbjct: 350 GNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGI 409
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD +GVL ACSH + G + + T+ ++D+ + G + A
Sbjct: 410 DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI-CNALIDMYSKCGKISFAR 468
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVH 415
E+ M ++D+V W +++ +H
Sbjct: 469 EVFNRM--DRHDIVSWNAMIIGYGIH 492
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 123/232 (53%), Gaps = 6/232 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C L + +K+H +++K G + + L++ A G +D A F +++
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA--KCGVIDDAIRFFDEMN 374
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ F+ ++ G V+ AL ++ M G++PD T + AC+ L AL+ G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
HG++ GF D + N+LI+MY KC K+ FA +F +MD+ + SW+A+I + +GL
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
E L LF ++ +P++ + +LS+C+H G + G+ ++ R+ S
Sbjct: 495 GMEALGLFHDLLALG-LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/582 (36%), Positives = 322/582 (55%), Gaps = 6/582 (1%)
Query: 27 LRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+R+ +L L+E K + LK GF + + + L++ S G ++
Sbjct: 205 VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISL--YSKCGDVNT 262
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +FR+I+ P +N +I GF E ++ L+ E+ G + T L +
Sbjct: 263 ARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSP 322
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L IHG K G + V + +Y K +++ A +F + +K+V +W+A+
Sbjct: 323 FGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAM 382
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I+ + NG + LF EM + + P + ++LSAC LG+L GK H +
Sbjct: 383 ISGYTQNGSTETAISLFKEMMKTE-FTPNAVTITTILSACAQLGSLSFGKWVHHLIKSEN 441
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N+ V T+L+DMY KCG + + LF M++K +T++ MI G +HG G EAL +++
Sbjct: 442 LEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYN 501
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EML G P V ++ VL ACSHAGLV EG F M +YRI P ++HY C+VD++GR+
Sbjct: 502 EMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRS 561
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L +ALE I+ MP++ VW +LL A +H + +I +A++ LF+++ YVLLS
Sbjct: 562 GQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLS 621
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+Y+ + + A IR + + L +SPG +L+EV + FVS DRSH +IY +
Sbjct: 622 NIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLE 681
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +++ GY + L DV+E+EK + HS+KLAIAF LI G+ IRI +NLR
Sbjct: 682 KLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLR 741
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT TK IS I ER I+VRD RFH FKDG CSC DYW
Sbjct: 742 VCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 783
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 208/417 (49%), Gaps = 20/417 (4%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEPGA 96
+ C N + +HAH + G+ N F S LV C S + YA +F + E
Sbjct: 118 VAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSR---VVYARKVFDGMPERDT 174
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+NT+I G VK F++++ L+ EM GV D+ T A+ A A+LQ LK GM I
Sbjct: 175 VLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCL 234
Query: 157 VFKVGFE-CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
K+GF CD +V LI++Y KC V A +F+++++ + +++A+I+ +NG +E
Sbjct: 235 ALKIGFGFCD-YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANG-GTE 292
Query: 216 C-LKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
C +KLF E+ + E R S +V ++ + G L L HG +++ LN V T
Sbjct: 293 CSVKLFRELLFSGE---RVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVST 349
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+ +Y K ++ LF +K + ++ MISG +G + A+S+F EM++ P
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTP 409
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V +LSAC+ G ++ G +K E + P + +VD+ + G + EA +L
Sbjct: 410 NAVTITTILSACAQLGSLSFGKWVHHLIKSE-NLEPNIYVSTALVDMYAKCGNISEAWQL 468
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK--NLFQINSHHPSDYVLLSNMYA 447
SM ++N V W +++ +H G A K N ++PS LS +YA
Sbjct: 469 FDSMS-EKNTVTWNTMIFGYGLH---GYGHEALKLYNEMLHLGYNPSAVTFLSVLYA 521
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 197/474 (41%), Gaps = 43/474 (9%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
+L +++ + HA + G+ ++ + L T L + + +A ++
Sbjct: 9 KLSRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKL--TQKLFDFSATRHARAL 66
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQA 146
F + +P F FN L+RGF ++ LY + + PDNFT+ AC+ +
Sbjct: 67 FFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKH 126
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L M +H H G+ ++FV ++L+++Y K +V +A +F M ++ W+ +I
Sbjct: 127 L---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMING 183
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
N + + ++LF EM + R + S + +VL A L L +G ++
Sbjct: 184 LVKNCCFDDSIQLFREMVADGV-RVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGF 242
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V T LI +Y KCG + LFR + + Y+ MISG +G + ++ +F E+L
Sbjct: 243 CDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELL 302
Query: 327 REGLEPDDVVYVGVLS----------ACS-HAGLVNEGLLCFDRMKLEYRIV-------- 367
G VG++ ACS H V G++ + + +
Sbjct: 303 FSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEID 362
Query: 368 -----------PTVQHYGCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSASK 413
TV + ++ + G A+ L + M N V ++LSA
Sbjct: 363 LARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACA 422
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYV--LLSNMYARAQRWYDVAKIRTEMASK 465
+L G+ +L + + P+ YV L +MYA+ + ++ M+ K
Sbjct: 423 QLGSLSFGK-WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/576 (35%), Positives = 325/576 (56%), Gaps = 13/576 (2%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIF 88
L++L C + + VH + +K G A+ L+ + C S W S + IF
Sbjct: 522 LSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNC--SDWQSTN---QIF 576
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R + + + +I +++ F++ L EM G+ PD F + A A ++LK
Sbjct: 577 RSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLK 636
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+G +HG+ + G E L V N+L+ MY KC VE A IF ++ K V SW+ +I ++
Sbjct: 637 QGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYS 696
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N +E LF +M + +RP + +L A + +L+ G+ H +R +
Sbjct: 697 RNNFPNESFSLFSDMLLQ--FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDS 754
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+L+DMYVKCG L LF + K +++++MI+G MHG GK A+++F +M
Sbjct: 755 YASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGS 814
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G+EPD + +L AC H+GL EG F M+ EY+I P ++HY C+VDL+ R G L E
Sbjct: 815 GIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKE 874
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
ALE I+SMPI+ + +W SLL ++H N+++ E A +F++ + YVLL+N+YA
Sbjct: 875 ALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAE 934
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A+RW V K++ ++ +GL ++ G+S +EV KV+ F++ +R+HP W+ I E + + +
Sbjct: 935 AERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARR 994
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
++ EG+ P L D+ E L GHS KLA+AF +++L +G PIR+ +N ++C+ C
Sbjct: 995 MRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHC 1054
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
H K IS + REII+RD RFHRF+ G CSCR Y
Sbjct: 1055 HEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 146/321 (45%), Gaps = 13/321 (4%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALS--------HWGSMDY 83
L++L C L K VH + +K G W + + AL G M
Sbjct: 309 LSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMAS 368
Query: 84 ACSIFRQIDEPGAFD-FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + G +N ++ G+ K EFEE+L L+ +M E G+ PD L K
Sbjct: 369 ARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCIT 428
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L ++G+ HG++ K+GF V N+LI+ Y K + A +F +M ++ SW++
Sbjct: 429 CLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNS 488
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I+ +SNGL SE ++LF M + + L+SVL AC G+ HG ++
Sbjct: 489 VISGCSSNGLNSEAIELFIRMWTQG-QELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKT 547
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ +L+DMY C + +FR M K ++++ MI+ G + +
Sbjct: 548 GLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLL 607
Query: 323 SEMLREGLEPDDVVYVGVLSA 343
EM+ +G+ PD L A
Sbjct: 608 QEMVLDGIRPDVFAVTSALHA 628
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 179/352 (50%), Gaps = 28/352 (7%)
Query: 79 GSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
G + A ++F + P A D + +L+ + K +F+EA+ L+ +M GV PD
Sbjct: 150 GDLGEARTVFDGM-PPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVS 208
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ K + L +L EG IHG + K+G V N+LI +Y +C ++E A+ +F M +
Sbjct: 209 CVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPR 268
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
SW+++I SNG + LF +M ++ ++L SVL AC LG +GK
Sbjct: 269 DAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVL-SVLPACAGLGYGLIGKAV 327
Query: 256 HGSLIRN--ISALNVI--------VETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSV 304
HG +++ + L+ + + + L+ MYVKCG + +F M+ K + +++
Sbjct: 328 HGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNL 387
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS-----ACSHAGLVNEGLLCFDR 359
++ G A G+ +E+LS+F +M G+ PD+ +L +C+ GLV G +
Sbjct: 388 IMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYI---- 443
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+KL + V + ++ ++ M+G+A+ + MP +Q+ + W S++S
Sbjct: 444 VKLGFGAQCAVCN--ALISFYAKSNMIGDAVLVFNRMP-RQDTISWNSVISG 492
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + + +L E + +H + K G A+ L+A S G M+ A +F +
Sbjct: 211 LKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAV--YSRCGRMEDAARVFDSMHPR 268
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A +N++I G A+ L+++M+ +G E + T ++ ACA L G +H
Sbjct: 269 DAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVH 328
Query: 155 GHVFKVGFEC----------DLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWSAI 203
G+ K G D + + L+ MY KC + A +F M K +V W+ I
Sbjct: 329 GYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLI 388
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
+ +A G + E L LF +M+ E P+E + +L T L G HG +++
Sbjct: 389 MGGYAKVGEFEESLSLFVQMH-ELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLG 447
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
V +LI Y K + + +F M + ++++ +ISG + +G EA+ +F
Sbjct: 448 FGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFI 507
Query: 324 EMLREGLEPDDVVYVGVLSACSHA 347
M +G E D V + VL AC+ +
Sbjct: 508 RMWTQGQELDSVTLLSVLPACAQS 531
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/615 (35%), Positives = 344/615 (55%), Gaps = 40/615 (6%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ L + L E ++H K +PF + L+ A G ++YA ++
Sbjct: 114 RISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAAC--GRINYARNV 171
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F ++ + +NT+I + + +EA L+ EM + V PD + AC + +
Sbjct: 172 FDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 231
Query: 148 KEGMQIHGHVFK-----------------VGFEC--------------DLFVQNSLINMY 176
+ I+ + + G C +LFV ++++ Y
Sbjct: 232 RYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGY 291
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
K +++ A IF Q + K + W+ +I+A+A + E L++F EM +P+ +
Sbjct: 292 SKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGI-KPDVVTM 350
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+SV+SAC +LG LD K H N + ++ +LI+MY KCG L+ +F M
Sbjct: 351 LSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPT 410
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ +++S MI+ AMHG+ ++LS+F++M +E +EP++V +VGVL CSH+GLV EG
Sbjct: 411 RNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 470
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M EY I P ++HYGC+VDL GRA +L EALE+I+SMP+ N V+W SL+SA +VH
Sbjct: 471 FASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHG 530
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
LE+GE+AAK + ++ H VL+SN+YAR RW V IR M K + + G S +
Sbjct: 531 ELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRI 590
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
++ K ++F+ D+ H + IY ++++ +LK GY PD VL DV+E+EK++ +
Sbjct: 591 DLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLW 650
Query: 537 HSQKLAIAFALIHL----SQGS--PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKR 590
HS+KLA+ F L++ +GS IRI +NLR+C DCH + KL+S +YE EIIVRDR R
Sbjct: 651 HSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTR 710
Query: 591 FHRFKDGTCSCRDYW 605
FHR+KDG CSCRDYW
Sbjct: 711 FHRYKDGLCSCRDYW 725
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 202/435 (46%), Gaps = 50/435 (11%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P + L L CK+L K++HAH+L+ N S L S
Sbjct: 4 PPPRPSFAVS-AANTILEKLSFCKSLNHIKQLHAHILRTVI--NHKLNSFLFNLSFSSSS 60
Query: 79 GSMDYACSIFRQIDE-PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
++ YA ++F I P + FN+L+R + E + Y + G D +FP +
Sbjct: 61 INLSYALNLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPI 120
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
KA +K+ AL EGM++HG FK+ D FV+ L++MY C ++ +A +F +M Q+ V
Sbjct: 121 LKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDV 180
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
+W+ +I + GL E KLF EM + P+E IL +++SAC G + + +
Sbjct: 181 VTWNTMIERYCRFGLLDEAFKLFEEMKDSNVM-PDEMILCNIVSACGRTGNMRYNRAIYD 239
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ--- 314
LI N ++ + T+L+ MY GC++ + FR M+ + + M+SG + G+
Sbjct: 240 FLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDD 299
Query: 315 ----------------------------GKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+EAL +F EM G++PD V + V+SAC
Sbjct: 300 ARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISAC-- 357
Query: 347 AGLVNEGLLCFDRMKLEYRIV------PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
VN G L D+ K +R + ++++ + G L A ++ + MP +
Sbjct: 358 ---VNLGTL--DKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMP-TR 411
Query: 401 NDVVWRSLLSASKVH 415
N V W S+++A +H
Sbjct: 412 NVVSWSSMINAFAMH 426
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 319/565 (56%), Gaps = 9/565 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
L +++HA LK NP ++L+ A C L H A +F ++ P +
Sbjct: 542 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLH-----RAQRVFDEMPHPSTVPWT 596
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
LI ++ + EA+ + F G+ PD+FT + ACA++ L G + +
Sbjct: 597 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 656
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G +FV + +++Y KC ++ A +F +M K +W A++ +ASNG E L LF
Sbjct: 657 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 716
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M E +P+ + LSACT LGALDLG+ + + N ++ T+LIDMY K
Sbjct: 717 LAMQAEGM-KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 775
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + +F+ M K + ++ MI GL M G K A ++ +M + G++ +D ++G+
Sbjct: 776 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 835
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L +C+H GL+ +G F M Y I P ++HYGC+VDL+ RAG+L EA +L+ MP+
Sbjct: 836 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 895
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N V+ +LL K+H N E+ E K L + + +YV+LSN+Y+ RW D AK+R
Sbjct: 896 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 955
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
+M +KG+ + P S VE KV++F D+SHP D IY+ + ++ ++K GY P
Sbjct: 956 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 1015
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
V+ DV+++EK L HS+KLAIAF L+ G IR+ +NLR+C+DCHT KL+S I
Sbjct: 1016 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 1075
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH F+DG+CSC DYW
Sbjct: 1076 REIIVRDNNRFHCFRDGSCSCNDYW 1100
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 6/283 (2%)
Query: 129 PDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P + T P K+ ++L L+ G Q+H K+ + V SL+++Y KC + A
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F +M S W+A+I A+ G E + + RP+ V VL+AC +
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHV-ARNAFANGMRPDSFTAVRVLTACARIA 641
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L G+ + + A +V V T+ +D+YVKCG + K +F M K + + M+
Sbjct: 642 DLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVG 701
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRI 366
G A +G +EAL +F M EG++PD G LSAC+ G ++ G + E+
Sbjct: 702 GYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 761
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G EA + Q M +++ +VW +++
Sbjct: 762 NPVLG--TALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMI 801
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/599 (36%), Positives = 333/599 (55%), Gaps = 58/599 (9%)
Query: 20 PKGPEL-----NLRLKEQECLTILKTCKNLEEF----KKVHAHVLKWGFFWNPFCASNLV 70
P+ P L +L L Q + + + + +HA LK GF A++L
Sbjct: 22 PRAPRLLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGF-----AAADLF 76
Query: 71 ATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
AL + G D A + F + F N ++ +V E EA +++ M ER
Sbjct: 77 VRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRER- 135
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
D+ N++I+ Y +V+ A
Sbjct: 136 --------------------------------------DMVSWNTMIHGYAVNGEVDLAR 157
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F MD + SWS++++A+ + L+L+ EM C P+ + +VSVLSAC+ +
Sbjct: 158 EVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMR-AACVNPDCTTMVSVLSACSDM 216
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
GAL +G H + N L+V + T+LIDMY KCG +E + +F M K LT+S MI
Sbjct: 217 GALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMI 276
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
GLA HG G +ALS+FS ML EGL+P++V ++GVL +C+H GLV++G F M + + +
Sbjct: 277 IGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGV 336
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P VQHYGC+VDL+GR+G + EA +LI+ MP + + V+WR+LL A +++ N+E+ E A
Sbjct: 337 TPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAMA 396
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
L ++ H YVLLSN+YA+A W VA++R + + + + PG S +E +++F+
Sbjct: 397 KLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSSIEWQNTIHEFI 456
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
S DRSHP IY+M+ +M +L+ GY P VL+D+DE K L HS+KLA+AF
Sbjct: 457 SGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERALAEHSEKLAVAFG 516
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L+ GS +RI +NLR C DCH+ KLI+++YER++I+RDR RFH F +G CSC+DYW
Sbjct: 517 LLTTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHHFSEGRCSCKDYW 575
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/541 (40%), Positives = 325/541 (60%), Gaps = 12/541 (2%)
Query: 32 QECLTILK---TCKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSI 87
+ C+ +L+ +L K++HA L+ G +P A +L+ A + YA ++
Sbjct: 17 RHCVALLRLHLAAPSLATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAV 76
Query: 88 F-RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
R + +P F NT++R AL L+ R PD T+P L +ACA+L +
Sbjct: 77 LTRVLPDPDPFSLNTVLRIAASSSRPSLALALHAR---RLAPPDTHTYPPLLQACARLLS 133
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAII 204
L+ G +IH K G +FV+NSL+++YG C E A +F ++ ++++ SW++++
Sbjct: 134 LRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSML 193
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A+NG +E L +F EM + + P+ +VSVL+A +GAL LG+ H L +
Sbjct: 194 NGFAANGRPNEVLTIFREMLDVN-FMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGL 252
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N V +LID+Y KCG +E +F M A + ++++ +I GLA++G GKEAL +F
Sbjct: 253 VENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFG 312
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M RE L P ++ VGVL ACSH GLV++G + F+RMK EY I P ++H GC+VDL+GRA
Sbjct: 313 IMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRA 372
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G + EA + I +MP++ N VVWR+LL A +H LE+GE A L +++ H DYVLLS
Sbjct: 373 GKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLS 432
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA RW DV +R M G+ ++PG SLVE+ VY+FV DRSHP + IY+M+
Sbjct: 433 NLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVMGDRSHPESEQIYQMLA 492
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ L+ EGY P S VL D++E+EK L HS++LAIAFAL+ G+PIRI +NLR
Sbjct: 493 EVADSLRREGYIPRTSNVLADIEEEEKETALNYHSERLAIAFALLKSLPGTPIRIVKNLR 552
Query: 564 M 564
+
Sbjct: 553 L 553
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 350/609 (57%), Gaps = 44/609 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV--ATCALSHWGSMDYACSIFRQID 92
++++ +CK++++ K+ HA ++ +P A+ L+ A CA S+ YA +F QI
Sbjct: 20 VSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAACA-----SLSYAHKLFDQIP 74
Query: 93 EPGAFDFNTLIRGF-VKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEG 150
+P F +NT+I+ + +L ++ + + G+ P+ ++F F AC ++EG
Sbjct: 75 QPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEG 134
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGK------CEKV---------------------- 182
Q+ H KVG E ++FV N+LI MYGK +KV
Sbjct: 135 EQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGS 194
Query: 183 ---EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
A +F M ++ V SWS IIA + G + E L F +M + +P E LVS
Sbjct: 195 GNMSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKML-QIGPKPNEYTLVSA 253
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L+AC++L ALD GK H + + +N + S+IDMY KCG +E +F K +
Sbjct: 254 LAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQK 313
Query: 300 L-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
+ ++ MI G AMHG EA+++F +M E + P+ V ++ +L+ACSH +V EG L F
Sbjct: 314 VWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFR 373
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
M +Y I P ++HYGC+VDL+ R+G+L EA ++I SMP+ + +W +LL+A +++ ++
Sbjct: 374 LMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDM 433
Query: 419 EIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA-SKGLNQSPGFSLVE 477
E G + + ++ +H +VLLSN+Y+ + RW + +R + S+ + PG S +E
Sbjct: 434 ERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSSIE 493
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKG 536
+ ++F+ D+SHP IY + +M +LK GY P++ ++L D+D++E +E L
Sbjct: 494 LKGTFHQFLVGDQSHPQSREIYSFLDEMTTKLKSAGYVPELGELLHDIDDEEDKETALSV 553
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLAIAF L++ + G+PIRI +NLR+C DCH TK IS +Y R IIVRDR R+H F+D
Sbjct: 554 HSEKLAIAFGLMNTANGTPIRIVKNLRVCGDCHQATKFISKVYNRVIIVRDRTRYHHFED 613
Query: 597 GTCSCRDYW 605
G CSC+DYW
Sbjct: 614 GICSCKDYW 622
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 319/565 (56%), Gaps = 9/565 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
L +++HA LK NP ++L+ A C L H A +F ++ P +
Sbjct: 566 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLH-----RAQRVFDEMPHPSTVPWT 620
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
LI ++ + EA+ + F G+ PD+FT + ACA++ L G + +
Sbjct: 621 ALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQE 680
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G +FV + +++Y KC ++ A +F +M K +W A++ +ASNG E L LF
Sbjct: 681 GVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLF 740
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M E +P+ + LSACT LGALDLG+ + + N ++ T+LIDMY K
Sbjct: 741 LAMQAEGM-KPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAK 799
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + +F+ M K + ++ MI GL M G K A ++ +M + G++ +D ++G+
Sbjct: 800 CGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGL 859
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L +C+H GL+ +G F M Y I P ++HYGC+VDL+ RAG+L EA +L+ MP+
Sbjct: 860 LCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPA 919
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N V+ +LL K+H N E+ E K L + + +YV+LSN+Y+ RW D AK+R
Sbjct: 920 NAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRL 979
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
+M +KG+ + P S VE KV++F D+SHP D IY+ + ++ ++K GY P
Sbjct: 980 DMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLEMKTMGYEPTTEV 1039
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
V+ DV+++EK L HS+KLAIAF L+ G IR+ +NLR+C+DCHT KL+S I
Sbjct: 1040 VMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLRVCSDCHTAIKLVSRITH 1099
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH F+DG+CSC DYW
Sbjct: 1100 REIIVRDNNRFHCFRDGSCSCNDYW 1124
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 128 EPDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
P + T P K+ ++L L+ G Q+H K+ + V SL+++Y KC + A
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M S W+A+I A+ G E + + RP+ V VL+AC +
Sbjct: 606 RVFDEMPHPSTVPWTALITAYMDAGDLREAVHV-ARNAFANGMRPDSFTAVRVLTACARI 664
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
L G+ + + A +V V T+ +D+YVKCG + K +F M K + + M+
Sbjct: 665 ADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMV 724
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYR 365
G A +G +EAL +F M EG++PD G LSAC+ G ++ G + E+
Sbjct: 725 GGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFL 784
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
P + ++D+ + G EA + Q M +++ +VW +++
Sbjct: 785 DNPVLG--TALIDMYAKCGSTVEAWVVFQQMR-KKDIIVWNAMI 825
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/620 (35%), Positives = 342/620 (55%), Gaps = 50/620 (8%)
Query: 27 LRLKEQECLTILKT-CKNLEEFKKVHAHVLKWGFFWNPFCASNLVA-TCALSHWGSMDYA 84
+R+ E E + I+++ C L K++HAH+ + + + +NL+ L H Y
Sbjct: 6 IRVLEWEAVRIIESHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYP 65
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F Q+ P F ++ LIR + + F ++ LY M V P +FTF ALF + L
Sbjct: 66 HLLFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALF---SLL 122
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ G Q+H H F GF DL+V N++I+MY K ++ A +F +M + V +W+ +I
Sbjct: 123 KNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELI 182
Query: 205 AAHASNG------------------LWS-------------ECLKLFGEMNNEKCWRPEE 233
A+A +G W+ + L+ F +M E +E
Sbjct: 183 VAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMR-EAGVVTDE 241
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNI-------SALNVIVETSLIDMYVKCGCLEK 286
LV +SAC LG + IR I S NV V ++LIDMY KCG +E+
Sbjct: 242 ITLVGAISACAQLGV-----SGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEE 296
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F+ M + +YS MI G A+HG+ + A+ +F EML G++P+ V +VG+ +ACSH
Sbjct: 297 AYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSH 356
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
AG+V +G F MK Y + PT HY C+ DL+GRAG L +AL+L+Q+MP++ N VW
Sbjct: 357 AGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWG 416
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LL AS +H N ++ EIA+++LF++ + +Y+LLS YA A +W DV+++R M K
Sbjct: 417 ALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQ 476
Query: 467 LNQSPGFSLVEVARK-VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDV 525
L ++PG S VE +++F + D HP + I + + + +LK GY P ++ V D+
Sbjct: 477 LRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSVPYDI 536
Query: 526 DEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
D++ KR L HS+KLA+A+ L+ GS I+I +NLR+C DCH S + R+IIV
Sbjct: 537 DDEGKRCLLVSHSEKLALAYGLLSTDAGSTIKIMKNLRICEDCHIVMCGASKLTGRKIIV 596
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RD RFH F +G CSC ++W
Sbjct: 597 RDNMRFHHFLNGACSCNNFW 616
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/527 (38%), Positives = 322/527 (61%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G+++ A ++F ++ + +N ++ G K EEAL L++ M E PD ++ ++
Sbjct: 149 GNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVL 208
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ CA L AL G Q+H +V K GFEC+L V SL +MY K + + M S+
Sbjct: 209 RGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLV 268
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +++ A G + L + M +RP++ VSV+S+C+ L L GK H
Sbjct: 269 AWNTLMSGKAQKGYFEGVLDQYCMMKMAG-FRPDKITFVSVISSCSELAILCQGKQIHAE 327
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++ ++ V V +SL+ MY +CGCL+ + F ++ + +S MI+ HGQG+EA
Sbjct: 328 AVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEA 387
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F+EM +E L +++ ++ +L ACSH GL ++GL FD M +Y + +QHY C+VD
Sbjct: 388 IKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVD 447
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GR+G L EA +I+SMP++ + ++W++LLSA K+H N EI A + +I+ +
Sbjct: 448 LLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSAS 507
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLL+N+Y+ A RW +V+++R M K + + PG S VEV +V++F D HP I
Sbjct: 508 YVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEI 567
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ + ++ ++K +GY PD S VL D+D +EK + L+ HS+KLAIAFAL++ +G PIR+
Sbjct: 568 NQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRV 627
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH K IS I + EIIVRD RFH FK+GTCSC DYW
Sbjct: 628 MKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCGDYW 674
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 32/251 (12%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F L +AC L+++ G Q+H +F G D F+ N L+N+Y K +++ A A+F +M
Sbjct: 72 FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131
Query: 194 Q-------------------------------KSVASWSAIIAAHASNGLWSECLKLFGE 222
+ ++VA+W+A++ + E L LF
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M NE + P+E L SVL C HLGAL G+ H +++ N++V SL MY+K G
Sbjct: 192 M-NELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAG 250
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ G + M D + ++ ++SG A G + L + M G PD + +V V+S
Sbjct: 251 SMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVIS 310
Query: 343 ACSHAGLVNEG 353
+CS ++ +G
Sbjct: 311 SCSELAILCQG 321
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 159/321 (49%), Gaps = 20/321 (6%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHW-- 78
EL+ E ++L+ C +L ++VHA+V+K GF NLV C+L+H
Sbjct: 194 ELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGF------ECNLVVGCSLAHMYM 247
Query: 79 --GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
GSM + + + +NTL+ G ++ FE L Y M G PD TF +
Sbjct: 248 KAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVS 307
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ +C++L L +G QIH K G ++ V +SL++MY +C ++ + F + ++
Sbjct: 308 VISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERD 367
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V WS++IAA+ +G E +KLF EM E E + L S+L AC+H G D G
Sbjct: 368 VVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFL-SLLYACSHCGLKDKGLGLF 426
Query: 257 GSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLAMHG 313
+++ L ++ T L+D+ + GCLE+ + R M K + + ++S +H
Sbjct: 427 DMMVKKY-GLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHK 485
Query: 314 QGKEALSIFSEMLREGLEPDD 334
+ A + E+LR ++P D
Sbjct: 486 NAEIARRVADEVLR--IDPQD 504
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 49/263 (18%)
Query: 194 QKSVASWSAI-IAAHASNGLWSECLKLFGEMNNEKCWR-----------PEESILVSVLS 241
Q S+ +S I H NG +S+ + F + ++ R E + ++L
Sbjct: 18 QNSIFRFSTISFKTHFQNGRFSDGNEQFATLCSKGHIREAFESFLSEIWAEPRLFSNLLQ 77
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RM------- 293
AC L ++ LGK H + + + + + L+++Y K G L+ + LF RM
Sbjct: 78 ACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMS 137
Query: 294 -----------------------MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
M D+ T++ M++GL +EAL +FS M
Sbjct: 138 CNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSF 197
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGC-VVDLMGRAGMLGE 388
PD+ VL C+H G + G MK + V GC + + +AG + +
Sbjct: 198 MPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVV---GCSLAHMYMKAGSMHD 254
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
+I MP + V W +L+S
Sbjct: 255 GERVINWMP-DCSLVAWNTLMSG 276
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/610 (36%), Positives = 347/610 (56%), Gaps = 44/610 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMD-YACSIFRQID 92
++ L C NL + K++H HVL+ G + + + L+ T L+ G MD YA + +
Sbjct: 53 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRT--LTKLGVPMDPYARRVIEPVQ 110
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F + +IRG+ E +F+EA+ +Y M + + P +FTF AL KAC ++ L G Q
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG- 211
H F++ C ++V N++I+MY KCE ++ A +F +M ++ V SW+ +IAA+A G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 212 -----------------LWS-------------ECLKLFGEMNNEKCWRPEESILVSVLS 241
W+ E L+ F M R +E + +S
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RADEVTVAGYIS 289
Query: 242 ACTHLGALDLGKCTHGSLIRNISALN----VIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
AC LGA I S + V++ ++LIDMY KCG +E+ + +F M +K
Sbjct: 290 ACAQLGASKYAD--RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLC 356
TYS MI GLA HG+ +EAL +F M+ + ++P+ V +VG L ACSH+GLV++G
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
FD M + + PT HY C+VDL+GR G L EALELI++M ++ + VW +LL A ++H+
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS-L 475
N EI EIAA++LF++ +Y+LLSN+YA A W V ++R + KGL ++P S +
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
V+ +++KF + +HP + I + + ++ +L GY PD+S V DV ++ KR L
Sbjct: 528 VDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILI 587
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
H++KLA+AF+L+ ++ S I I +NLRMC DCH + +L S + + II+RD RFH F+
Sbjct: 588 QHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFR 647
Query: 596 DGTCSCRDYW 605
G CSC D+W
Sbjct: 648 SGDCSCGDFW 657
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 323/571 (56%), Gaps = 7/571 (1%)
Query: 38 LKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L C L + + V G+ + F S+L+ A WG+M A +F ++
Sbjct: 115 LSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYA--RWGAMGDAVKVFVRMPRR 172
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++T++ GFV + +A+ +Y M E GV+ D + +AC + ++ G +H
Sbjct: 173 DRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVH 232
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
GH+ + G D+ SL++MY K ++ A +F M ++ SWSA+I+ A NG
Sbjct: 233 GHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSD 292
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+LF M +P+ LVS L AC+++G L LG+ HG ++R N I+ T+
Sbjct: 293 EALRLFRNMQASGI-QPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD-FNCILGTAA 350
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG L LF M++D+ + ++ MI+ HG+G++AL++F EM G+ PD
Sbjct: 351 IDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +LSA SH+GLV EG L F RM ++I P +HY C+VDL+ R+G++ EA +L+
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLT 470
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SM + +W +LLS + LE+GE A N+ ++ L+SN+YA ++W
Sbjct: 471 SMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDK 530
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V ++R M G + PG S +E+ + FV +D+SHP + I + +++ +++ GY
Sbjct: 531 VRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGY 590
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P V D++E+ K ++L HS++LAIAF L++ G+ + I +NLR+C DCH K
Sbjct: 591 IPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKY 650
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I +REI+VRD KRFH FKDG CSCRDYW
Sbjct: 651 ISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 153/291 (52%), Gaps = 8/291 (2%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
PD+ TF ACA+L L+ G + F G++ D+FV +SL+++Y + + A
Sbjct: 104 ARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAV 163
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M ++ +WS ++A S G + ++++ M E + +E +++ V+ ACT
Sbjct: 164 KVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-REDGVKGDEVVMIGVIQACTAA 222
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+ +G HG L+R+ ++V+ TSL+DMY K G L+ +F +M + +++S MI
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEY 364
SG A +GQ EAL +F M G++PD V L ACS+ G + G + F + ++
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF 342
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ +D+ + G L A +++ +M ++ ++W ++++ H
Sbjct: 343 NCILGT----AAIDMYSKCGSLASA-QMLFNMISDRDLILWNAMIACCGAH 388
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 4/205 (1%)
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
H+ G + L++F + RP+ + LSAC LG L G+
Sbjct: 84 HSRRGSPASALRVFRAL--PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKD 141
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V V +SL+ +Y + G + + +F M + ++T+S M++G GQ +A+ ++ M
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+G++ D+VV +GV+ AC+ A V G + L + + V +VD+ + G+L
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHL-LRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
A + M + +NDV W +++S
Sbjct: 261 DVACRVFGLM-VHRNDVSWSAMISG 284
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/527 (38%), Positives = 317/527 (60%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +F ++ E +N +I G + ++AL L+ EM+ G PD FT ++
Sbjct: 142 GDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVL 201
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ CA L++L G ++H + K GFE V +SL +MY K + + K M ++V
Sbjct: 202 RGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVV 261
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +IA A NG E L + M +RP++ VSVLSAC+ L L G+ H
Sbjct: 262 AWNTLIAGKAQNGCPEEVLNQYNMMKMAG-FRPDKITFVSVLSACSELATLGQGQQIHAE 320
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+I+ ++ + V +SLI MY + GCLE + F + + +S MI+ HG+G+EA
Sbjct: 321 VIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEA 380
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F +M +E ++V ++ +L ACSH+GL +G FD M +Y++ P ++HY CVVD
Sbjct: 381 LELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVD 440
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +I+SMP+Q + ++W++LL+A K+H E+ E ++ + +++ +
Sbjct: 441 LLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAAS 500
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN++A A+ W +V++IR M + + + PG S +E+ V++F D+SHP + I
Sbjct: 501 YVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEI 560
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ ++ +LK GY P++ VL D+D +EK L HS+K AIAFAL++ S+ PIR+
Sbjct: 561 DLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRV 620
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C+DCH K IS I REIIVRD RFH FKDG CSC +YW
Sbjct: 621 MKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDGECSCGNYW 667
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 38/328 (11%)
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
+ F + D F L ++C KL +L G Q+H + G D F+ N L+N Y K
Sbjct: 52 DTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLG 111
Query: 181 K-------------------------------VEFASAIFKQMDQKSVASWSAIIAAHAS 209
+ +E A +F +M ++++A+W+A+IA
Sbjct: 112 QFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQ 171
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L LF EM + P+E L SVL C L +L G+ H L++ L+ +
Sbjct: 172 FEFNKQALSLFKEMYG-LGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSV 230
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +SL MY+K G L G L + M + + ++ +I+G A +G +E L+ ++ M G
Sbjct: 231 VGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAG 290
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
PD + +V VLSACS + +G + ++ + ++ + R+G L ++
Sbjct: 291 FRPDKITFVSVLSACSELATLGQGQQIHAEV-IKAGASSVLAVVSSLISMYSRSGCLEDS 349
Query: 390 LELIQSMPIQQN-DVV-WRSLLSASKVH 415
I++ ++N DVV W S+++A H
Sbjct: 350 ---IKAFVDRENFDVVLWSSMIAAYGFH 374
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 323/571 (56%), Gaps = 7/571 (1%)
Query: 38 LKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L C L + + V G+ + F S+L+ A WG+M A +F ++
Sbjct: 115 LSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYA--RWGAMGDAVKVFVRMPRR 172
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++T++ GFV + +A+ +Y M E GV+ D + +AC + ++ G +H
Sbjct: 173 DRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVH 232
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
GH+ + G D+ SL++MY K ++ A +F M ++ SWSA+I+ A NG
Sbjct: 233 GHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSD 292
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+LF M +P+ LVS L AC+++G L LG+ HG ++R N I+ T+
Sbjct: 293 EALRLFRNMQASGI-QPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD-FNCILGTAA 350
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG L LF M++D+ + ++ MI+ HG+G++AL++F EM G+ PD
Sbjct: 351 IDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +LSA SH+GLV EG L F RM ++I P +HY C+VDL+ R+G++ EA +L+
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLT 470
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SM + +W +LLS + LE+GE A N+ ++ L+SN+YA ++W
Sbjct: 471 SMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDK 530
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V ++R M G + PG S +E+ + FV +D+SHP + I + +++ +++ GY
Sbjct: 531 VRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGY 590
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P V D++E+ K ++L HS++LAIAF L++ G+ + I +NLR+C DCH K
Sbjct: 591 IPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKY 650
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I +REI+VRD KRFH FKDG CSCRDYW
Sbjct: 651 ISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 153/292 (52%), Gaps = 8/292 (2%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
PD+ TF ACA+L L+ G + F G++ D+FV +SL+++Y + + A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F +M ++ +WS ++A S G + ++++ M E + +E +++ V+ ACT
Sbjct: 163 VKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-REDGVKGDEVVMIGVIQACTA 221
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ +G HG L+R+ ++V+ TSL+DMY K G L+ +F +M + +++S M
Sbjct: 222 ARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAM 281
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLE 363
ISG A +GQ EAL +F M G++PD V L ACS+ G + G + F + +
Sbjct: 282 ISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD 341
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + +D+ + G L A +++ +M ++ ++W ++++ H
Sbjct: 342 FNCILGT----AAIDMYSKCGSLASA-QMLFNMISDRDLILWNAMIACCGAH 388
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 4/205 (1%)
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
H+ G + L++F + RP+ + LSAC LG L G+
Sbjct: 84 HSRRGSPASALRVFRAL--PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKD 141
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V V +SL+ +Y + G + + +F M + ++T+S M++G GQ +A+ ++ M
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+G++ D+VV +GV+ AC+ A V G + L + + V +VD+ + G+L
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHL-LRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
A + M + +NDV W +++S
Sbjct: 261 DVACRVFGLM-VHRNDVSWSAMISG 284
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 312/527 (59%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F + F + ++ G+++ EEA L+++M ER + ++ A+
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAML 319
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ E M++ +F V ++ N++I Y +C K+ A +F +M ++
Sbjct: 320 AGYVQ----GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+IA ++ +G E L+LF +M E R S S LS C + AL+LGK HG
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ V +L+ MY KCG +E+ LF+ MA K ++++ MI+G + HG G+ A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L F M REGL+PDD V VLSACSH GLV++G F M +Y ++P QHY C+VD
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG+L +A L+++MP + + +W +LL AS+VH N E+ E AA +F + +
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW DV K+R M KG+ + PG+S +E+ K + F D HP D I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ + +++ ++K GY S VL DV+E+EK ++ HS++LA+A+ ++ +S G PIR+
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 734
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K ++ I R II+RD RFH FKDG+CSC DYW
Sbjct: 735 IKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 159/352 (45%), Gaps = 30/352 (8%)
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
VA + G + A +F+++ + +N +I G+++ EFE A L++EM ER
Sbjct: 69 VAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER---- 124
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D ++ + K + + L + ++ F++ E D+ N++++ Y + V+ A ++F
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKAREL----FEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+M +K+ SW+A+++A+ N E LF N W LVS C G +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN---W-----ALVSW--NCLLGGFV 230
Query: 250 DLGKCTHG-SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
K +++ +V+ ++I Y + G +++ LF + T++ M+SG
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
+ +EA +F +M E ++V + +L+ + FD M
Sbjct: 291 YIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----- 341
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA-SKVHHNLE 419
V + ++ + G + EA L MP +++ V W ++++ S+ H+ E
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFE 392
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 53/374 (14%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F + E +NT++ G+ + ++A +F+R E ++ ++ AL A +
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDA----RSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
++E + FK L N L+ + K +K+ A F M+ + V SW+ I
Sbjct: 201 NSKMEEACML----FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTI 256
Query: 204 IAAHASNGLWSECLKLFGE--MNNEKCWR----------------------PEESILV-- 237
I +A +G E +LF E + + W PE + +
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN 316
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
++L+ +++ K L + NV ++I Y +CG + + LF M +
Sbjct: 317 AMLAGYVQGERMEMAK----ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ MI+G + G EAL +F +M REG + + LS C+ + G
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG---- 428
Query: 358 DRMKLEYRIVPTVQHYGCVVD-----LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
+L R+V GC V + + G + EA +L + M ++ V W ++++
Sbjct: 429 --KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGY 485
Query: 413 KVHHNLEIGEIAAK 426
H GE+A +
Sbjct: 486 SRHG---FGEVALR 496
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 125/296 (42%), Gaps = 46/296 (15%)
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ D+ N I+ Y + + A +FK+M + S S++ +I+ + NG + KLF E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M PE ++ + ++ +LGK L + +V +++ Y + G
Sbjct: 121 M-------PERDLVSWNVMIKGYVRNRNLGKARE--LFEIMPERDVCSWNTMLSGYAQNG 171
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF-------------------- 322
C++ +F M +K ++++ ++S + + +EA +F
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK 231
Query: 323 ------SEMLREGLEPDDVV-YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ + + DVV + +++ + +G ++E FD ++ T G
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
+ + M+ EA EL MP ++N+V W ++L+ +E+ AK LF +
Sbjct: 292 IQNR-----MVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEM----AKELFDV 337
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 336/574 (58%), Gaps = 15/574 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCA--SNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
+++ E +VH V+K G S + ALS +G ++YA + ++ +
Sbjct: 4 RSMWEALQVHGQVVKLGMGHKDASRKLSKVFTFAALSPFGDLNYARLLLSTNPTLNSYYY 63
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
NTL+R F + + PDNFTFP L K C++ + G Q+H + K
Sbjct: 64 NTLLRAFSQTPLPTPPFHALSLFLSMPSPPDNFTFPFLLKCCSRSKLPPLGKQLHALLTK 123
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+GF DL++QN L++MY + + A ++F +M + V SW+++I ++ L E + L
Sbjct: 124 LGFAPDLYIQNVLLHMYSEFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINL 183
Query: 220 FGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSL----IRNISALNVIVETSL 274
F M +C E+ ++SVL AC GAL +G+ H +L I S NV T+L
Sbjct: 184 FERM--LQCGVEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNV--STAL 239
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY K GC+ +F + + ++ MISGLA HG K+A+ +F +M G++PD+
Sbjct: 240 VDMYAKGGCIASARKVFDDVVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDE 299
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
VL+AC +AGL+ EG + F ++ Y + P++QH+GC+VDL+ RAG L EA + +
Sbjct: 300 RTVTAVLTACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVN 359
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD---YVLLSNMYARAQR 451
+MPI+ + V+WR+L+ A KVH + + E K+L +I D Y+L SN+YA +
Sbjct: 360 AMPIEPDTVLWRTLIWACKVHGDADRAERLMKHL-EIQDMRADDSGSYILASNVYASTGK 418
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W + A++R M KGL + PG S +EV V++FV D +HP + I+ + ++ +++
Sbjct: 419 WCNKAEVRELMNKKGLVKPPGTSRIEVDGGVHEFVMGDYNHPEAEEIFVELAEVVDKIRK 478
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY P +S+VL ++D++EK +L HS+KLA+A+ LI + GS IRI +NLR C DCH +
Sbjct: 479 EGYDPRVSEVLLEMDDEEKAVQLLHHSEKLALAYGLIRIGHGSTIRIVKNLRSCEDCHEF 538
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS IY+R+IIVRDR RFH FK+G CSC+DYW
Sbjct: 539 MKLISKIYKRDIIVRDRIRFHHFKNGECSCKDYW 572
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/573 (36%), Positives = 331/573 (57%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ LK C + K ++H+ ++K + F L+ S G + A +F +
Sbjct: 294 SALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDM--YSKCGLLQDARMVFDLMP 351
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I G+ EA+ L+ M++ G+E + T + K+ A QA Q
Sbjct: 352 XKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQ 411
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K G++ D +V NSL++ YGKC +E A+ +F+ + + +++++I A++ GL
Sbjct: 412 VHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGL 471
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E LK++ M + +P+ I S+ +AC +L A + GK H +++ +V
Sbjct: 472 GEEALKMYLRMQDRDI-KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGN 530
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY KCG ++ C+F ++ + +++S MI GLA HG G++AL +F +ML+ G+ P
Sbjct: 531 SLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILP 590
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + V VLSAC+HAGLV E F M+ + I PT +HY C+VD++GR G L EA+ L
Sbjct: 591 NHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVL 650
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
++ MP Q + VW +LL A+++H N+E+G AA+ L + ++LL+N+YA W
Sbjct: 651 VKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMW 710
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VAK+R M + + + PG S +E+ KVY F+ DRSHP IY + + +L
Sbjct: 711 DNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSA 770
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P I L DV++ EK + L HS+KLA+AF LI G+PIR+ +NLR+C DCHT
Sbjct: 771 GYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAF 830
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + REIIVRD RFH F+DG+CSC DYW
Sbjct: 831 KFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 186/380 (48%), Gaps = 14/380 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+L C LE+ KVH +++K G+ +PF A+ L+ A S G + A ++F +I
Sbjct: 193 TVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKS--GCPEAAIAVFYEIP 250
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+P +N +I G V + + AL L +M V P FT + KACA + +K G Q
Sbjct: 251 KPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQ 310
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+ E D FV LI+MY KC ++ A +F M K V W++II+ +++ G
Sbjct: 311 LHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGY 370
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E + LF M E ++ L ++L + A + H I++ + V
Sbjct: 371 DIEAMSLFTNMYKEGL-EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVAN 429
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+D Y KC LE +F + + + Y+ MI+ + +G G+EAL ++ M ++P
Sbjct: 430 SLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKP 489
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D ++ + +AC++ +G + L+ ++ V +V++ + G + +A +
Sbjct: 490 DAFIFSSLFNACANLSAYEQGKQIHVHV-LKCGLLSDVFAGNSLVNMYAKCGSIDDASCI 548
Query: 393 IQSMPIQQNDVVWRSLLSAS 412
N++ WR ++S S
Sbjct: 549 F-------NEISWRGIVSWS 561
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 174/342 (50%), Gaps = 25/342 (7%)
Query: 97 FDFNTLIRG--FVKEVEFEEALF---LYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
F F+++++G + +E + + L EM G+ P+ F+ + ACA L+ GM
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA---HA 208
++HG++ K+G++ D F N+L++MY K E A A+F ++ + + SW+A+IA H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N L LKL G+M + + P L S L AC +G + LG+ H +L++ +
Sbjct: 269 KNDL---ALKLLGKMGSYRV-APSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDS 324
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V LIDMY KCG L+ +F +M K + ++ +ISG + G EA+S+F+ M +E
Sbjct: 325 FVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKE 384
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV----VDLMGRAG 384
GLE + +L S AG G F I Q+ G V +D G+
Sbjct: 385 GLEFNQTTLSTILK--STAGSQANG---FCEQVHTISIKSGYQYDGYVANSLLDSYGKCC 439
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
+L +A ++ + P ++ V + S+++A + +GE A K
Sbjct: 440 LLEDAAKVFEVCP-AEDLVAYTSMITA---YSQYGLGEEALK 477
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 156/381 (40%), Gaps = 66/381 (17%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+P L + + GM IH + ++G ++N L+N+Y KC+ A +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLGLL---GLRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEM------NNEKCW------------------ 229
+ + SWSA+I+ + NG E L + EM NE +
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 230 ---------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
P E L +VL+AC L + G HG LI+ + +L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY K GC E + +F + ++++ +I+G +H + AL + +M + P
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 335 VVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
L AC+ GLV G L MK++ P ++D+ + G+L +A +
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDME--PDSFVGVGLIDMYSKCGLLQDARMVF 347
Query: 394 QSMPIQQNDVVWRSLLSA-SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
MP ++ +VW S++S S +++E A +LF +NMY
Sbjct: 348 DLMP-XKDVIVWNSIISGYSNCGYDIE-----AMSLF-------------TNMYKEGLE- 387
Query: 453 YDVAKIRTEMASKGLNQSPGF 473
++ + T + S +Q+ GF
Sbjct: 388 FNQTTLSTILKSTAGSQANGF 408
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/562 (36%), Positives = 326/562 (58%), Gaps = 36/562 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPAL 137
G +D A + F + E +N++I G + EAL ++ + + ++PD F+ +
Sbjct: 187 GRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASA 246
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS----------- 186
ACA L+ L G QIHG++ + F+ V N+LI+MY K VE A
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306
Query: 187 ----------------------AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
IF + V +W+A+I + NGL ++ +++F M
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+E RP L ++LSA + + +L+ GK H S IR+ AL+ V +L MY K G +
Sbjct: 367 SEGP-RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSI 425
Query: 285 EKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+F ++ ++ ++++ MI LA HG G+EA+ +F +ML G++PD + YVGVLSA
Sbjct: 426 NGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSA 485
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C+H GLV +G FD MK ++I PT+ HY C+VDL GRAG+L EA + +++MP++ + +
Sbjct: 486 CTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVI 545
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
W SLLS+ KV+ N+++ ++AA+ L I ++ Y L+N+Y+ +W D AKIR M
Sbjct: 546 AWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMK 605
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
++G+ + G S V++ K + F +D HP D IY+M+ ++ ++K G++PD VL
Sbjct: 606 ARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLH 665
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++ + K + L+ HS+KLAIAF +I + + +RI +NLR+CNDCH K IS + +REI
Sbjct: 666 DLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREI 725
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFH FKDG+CSC+DYW
Sbjct: 726 IVRDATRFHHFKDGSCSCKDYW 747
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 180/426 (42%), Gaps = 74/426 (17%)
Query: 55 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE 114
+K F WN + + G ++ A +F I + + T+I G+ + FE+
Sbjct: 38 VKTTFSWNTILS-------GYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFED 90
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
A+ ++ +M + V P FT + +CA + G ++H V K+G + V NSL+N
Sbjct: 91 AIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLN 150
Query: 175 MYGK-------------------------------CEKVEFASAIFKQMDQKSVASWSAI 203
MY K C +V+ A A F+ + ++ + SW+++
Sbjct: 151 MYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSM 210
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN- 262
IA +G +E L+ F + + +P+ L S LSAC +L L GK HG ++R
Sbjct: 211 IAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTM 270
Query: 263 --------------------------------ISALNVIVETSLIDMYVKCGCLEKGLCL 290
IS L+VI T+L++ YVK G + +
Sbjct: 271 FDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQI 330
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + D + ++ MI G +G +A+ +F M+ EG P+ +LSA S +
Sbjct: 331 FNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSL 390
Query: 351 NEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
N G + ++ + P+V + + + +AG + A ++ + ++ V W S++
Sbjct: 391 NHGKQIHASAIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMI 448
Query: 410 SASKVH 415
A H
Sbjct: 449 MALAQH 454
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 128/337 (37%), Gaps = 58/337 (17%)
Query: 14 TQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC 73
T E P+ L L+ + +L K++HA ++ G +P + L T
Sbjct: 364 TMVSEGPRPNSFTL----AAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNAL--TT 417
Query: 74 ALSHWGSMDYACSIFRQIDEP-GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNF 132
+ GS++ A +F + + + ++I + EEA+ L+ +M G++PD+
Sbjct: 418 MYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHI 477
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
T+ + AC HG + + G S ++ K++
Sbjct: 478 TYVGVLSACT-----------HGGLVEQG--------RSYFDLMKNVHKID--------- 509
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+++ ++ ++ GL E K M E P+ S+LS+C +DL
Sbjct: 510 --PTLSHYACMVDLFGRAGLLQEAYKFVENMPME----PDVIAWGSLLSSCKVYKNVDLA 563
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK----------CQLTY 302
K L+ I N ++L ++Y CG + + ++M + Q+
Sbjct: 564 KVAAERLLL-IEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQN 622
Query: 303 SVMISGL--AMHGQGKEAL----SIFSEMLREGLEPD 333
+ G+ +H Q E I+ E+ + G PD
Sbjct: 623 KTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPD 659
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 328/574 (57%), Gaps = 12/574 (2%)
Query: 38 LKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM-DYACSIFRQIDE 93
LK+C L + H + K G + PF + L++ + GS+ D A +F +
Sbjct: 56 LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLIS---MYCKGSLVDNARKVFEENFH 112
Query: 94 PGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N L+ G+V + EA+ L+ +M E GV ++ T L AC L+ G
Sbjct: 113 SRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGS 172
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H K GF+ D+ V N I MY KC V +A +F +M K + SW+A+++ +A NG
Sbjct: 173 SLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNG 232
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + L+L+ M+ P+ LV VLS+C +LGA +G + + N +
Sbjct: 233 LATNVLELYRNMDMNGV-HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLN 291
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI+MY +CG L K +F M ++ ++++ +I G MHG G+ A+ +F EM+R G+E
Sbjct: 292 NALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIE 351
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD +V VLSACSHAGL ++GL F MK Y++ P +HY C+VDL+GRAG L EA
Sbjct: 352 PDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQT 411
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI+SMPI+ + VW +LL A K+H N+E+ E+A + + ++ + YVLLSN+Y+ A
Sbjct: 412 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANN 471
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
V +IR M K L + PG S VE+ +V+ F+ DR+H D IY ++ ++E +
Sbjct: 472 SKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQ 531
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
E P+ R+ + R+ HS+KLA+AF L++ + G+ + I +NLR+C DCH +
Sbjct: 532 EFGKPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLF 589
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K++S I R++ VRD RFH F++G+CSC+DYW
Sbjct: 590 FKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 24/338 (7%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+NT +R K +F +AL LY +M G P+ FTFP K+CA L G Q HG +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSEC 216
KVG + FVQ LI+MY K V+ A +F++ +K ++A+++ + SN SE
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 217 LKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ LF +MN E P S+ L+ ++ AC L+LG H S ++ +V V I
Sbjct: 137 VLLFRQMNEEGV--PVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY+KCG + LF M K ++++ M+SG A +G L ++ M G+ PD V
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV-------PTVQHYGCVVDLMGRAGMLGE 388
VGVLS+C++ G + G ++E++I P + + ++++ R G L +
Sbjct: 255 TLVGVLSSCANLGAQSVG------HEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTK 306
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
A + MP ++ V W +++ +H + GEIA +
Sbjct: 307 AQAVFDGMP-ERTLVSWTAIIGGYGMHGH---GEIAVQ 340
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/522 (37%), Positives = 315/522 (60%), Gaps = 1/522 (0%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F + + + + T++ G + EAL ++ M GV D +TF ++ AC
Sbjct: 234 ARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGA 293
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L A +EG QIH + + ++ ++FV ++L++MY KC + A A+F++M K++ SW+A+
Sbjct: 294 LAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAM 353
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I + NG E +++F EM + +P + L SV+S+C +L +L+ G H + +
Sbjct: 354 IVGYGQNGCGEEAVRVFSEMQTDGI-KPNDFTLGSVISSCANLASLEEGAQFHCMALVSG 412
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+ V ++L+ +Y KCG +E LF M Q++Y+ ++SG A G+ KE + +F
Sbjct: 413 LRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFE 472
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+ML +G++P+ V ++GVLSACS +GLV +G F M+ ++ IV HY C++DL R+
Sbjct: 473 KMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRS 532
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA E I+ MP + + W +LLSA ++ ++EIG+ AA+NL + + +P+ YVLL
Sbjct: 533 GRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLC 592
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
+M+A W +VA +R M + + + PG S ++ +V+ F + D+SHP IYE +
Sbjct: 593 SMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQ 652
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ ++ EGY PD+S VL DV + EK L HS+KLAIAF LI + + PIR+ +NLR
Sbjct: 653 WLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLR 712
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH TK IS I R+I+VRD RFH+F +G CSC D+W
Sbjct: 713 VCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 164/376 (43%), Gaps = 41/376 (10%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF-----VKEVEFEEALFLYNEMFERG-- 126
AL+H + +F + + A +N LI GF L E G
Sbjct: 85 ALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGAR 144
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK-------- 178
V P T + A + L G Q+H + ++GF F + L++MY K
Sbjct: 145 VRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAK 204
Query: 179 -----------------------CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
C+ VE A +F+ M + +W+ ++ NGL SE
Sbjct: 205 RVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSE 264
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L +F M E ++ S+L+AC L A + GK H IR + N+ V ++L+
Sbjct: 265 ALDVFRRMRAEGVG-IDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALV 323
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KC + +FR M K ++++ MI G +G G+EA+ +FSEM +G++P+D
Sbjct: 324 DMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDF 383
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
V+S+C++ + EG F M L + P + +V L G+ G + +A L
Sbjct: 384 TLGSVISSCANLASLEEGAQ-FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDE 442
Query: 396 MPIQQNDVVWRSLLSA 411
MP + V + +L+S
Sbjct: 443 MPF-HDQVSYTALVSG 457
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 148/286 (51%), Gaps = 12/286 (4%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C L EE K++HA+ ++ + N F S LV S S+ A ++FR++
Sbjct: 286 SILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDM--YSKCRSIRLAEAVFRRMT 343
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ + EEA+ +++EM G++P++FT ++ +CA L +L+EG Q
Sbjct: 344 CKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQ 403
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H G + V ++L+ +YGKC +E A +F +M S++A+++ +A G
Sbjct: 404 FHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGK 463
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE- 271
E + LF +M K +P + VLSAC+ G ++ G C++ ++ + ++ +
Sbjct: 464 AKETIDLFEKM-LLKGVKPNGVTFIGVLSACSRSGLVEKG-CSYFHSMQQDHGIVLLDDH 521
Query: 272 -TSLIDMYVKCGCLEKGLCLFRMMADKC--QLTYSVMISGLAMHGQ 314
T +ID+Y + G L++ R M +C + ++ ++S + G
Sbjct: 522 YTCMIDLYSRSGRLKEAEEFIRQMP-RCPDAIGWATLLSACRLRGD 566
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 101/262 (38%), Gaps = 41/262 (15%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P + L A A+ L ++ F + +LF +N+L++ + +
Sbjct: 43 PPTYVLNHLLTAYARSGRLPLARRL----FDAMPDPNLFTRNALLSALAHARLLPDMDRL 98
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC------WRPEESILVSVLSA 242
F M Q+ S++A+IA + G + + + E+ RP + ++ A
Sbjct: 99 FASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMA 158
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK---------------------- 280
+ LG LG+ H ++R + L+DMY K
Sbjct: 159 ASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMY 218
Query: 281 ---------CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
C +E+ +F M D+ +T++ M++GL +G EAL +F M EG+
Sbjct: 219 NTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVG 278
Query: 332 PDDVVYVGVLSACSHAGLVNEG 353
D + +L+AC EG
Sbjct: 279 IDQYTFGSILTACGALAASEEG 300
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/597 (36%), Positives = 338/597 (56%), Gaps = 33/597 (5%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL C N F+ +VHAH++K + + F + L+ + S+ A ++F ++ E
Sbjct: 249 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVL--YTKCDSLGDAHNVFDEMPE 306
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLY---NEMFERGV------------------EPDNF 132
+ +I + + +AL L+ ++ GV EP+ F
Sbjct: 307 RNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEF 366
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
TF + +C G QIH + K+ +E +FV +SL++MY K K+ A +F+ +
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECL 426
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
++ V S +AII+ +A GL E L+LF + E + VL+A + L ALDLG
Sbjct: 427 PERDVVSCTAIISGYAQLGLDEEALELFRRLQGEG-MKSNYVTYTGVLTALSGLAALDLG 485
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
K H ++R+ V+++ SLIDMY KCG L +F M ++ ++++ M+ G + H
Sbjct: 486 KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKH 545
Query: 313 GQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRM---KLEYRIVP 368
G+G+E L +F+ M E ++PD V + VLS CSH GL ++GL F+ M K+E + P
Sbjct: 546 GEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIE--VEP 603
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL 428
++HYGCVVDL+GR+G + EA E I+ MP + +W SLL A +VH N++IGE A + L
Sbjct: 604 KMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQL 663
Query: 429 FQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQ 488
+I + +YV+LSN+YA A RW DV+ +R M K + + PG S +E+ + ++ F +
Sbjct: 664 LEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHAS 723
Query: 489 DRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI 548
DRSHP + I + ++ K GY PD+S VL DVDE++K + L GHS+KLA++F LI
Sbjct: 724 DRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLI 783
Query: 549 HLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+C DCH + K IS +Y RE+ +RD+ RFHR G CSC DYW
Sbjct: 784 ASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/606 (36%), Positives = 337/606 (55%), Gaps = 28/606 (4%)
Query: 25 LNLRLKEQECLTILKTCKNLEEF---KKVHAHVLK-WGFFWNPFCASNLVATCALSHWGS 80
L +R + L C LE +++HA VLK N F AS LV A +
Sbjct: 276 LGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNE--K 333
Query: 81 MDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPAL 137
+ A +F + EP +N +I G+ + EEAL L++ M E G P T +
Sbjct: 334 VASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGV 393
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA+ + +HG+V K G + FVQN+L++MY + +++ A IF +D + V
Sbjct: 394 LPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDV 453
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMN----------------NEKCWRPEESILVSVLS 241
SW+ +I G +E +L EM +C P L+++L
Sbjct: 454 VSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCM-PNNITLMTLLP 512
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C L A GK HG +R+ ++ V ++L+DMY KCGCL +F + + +T
Sbjct: 513 GCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVIT 572
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
++V+I MHG G EA+++F EM G P++V ++ L+ACSH+GLV+ GL F M
Sbjct: 573 WNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGM 632
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM-PIQQNDVVWRSLLSASKVHHNLE 419
+ ++ + PT + CVVD++GRAG L EA +I SM P +Q W SLL A ++H N+E
Sbjct: 633 ERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVE 692
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+GE+AA+ LF++ S YVLL N+Y+ A W +R M +G+ + PG S +E+
Sbjct: 693 LGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELD 752
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
+++F++ + SHPA ++ + + +++ EGY+PD S VL DVDEDEK L+ HS+
Sbjct: 753 GAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSE 812
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLAIAF L+ G+ IR+A+NLR+CNDCH K +S + R+I++RD +RFH F+DG+C
Sbjct: 813 KLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSC 872
Query: 600 SCRDYW 605
SC DYW
Sbjct: 873 SCGDYW 878
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 181/398 (45%), Gaps = 36/398 (9%)
Query: 48 KKVHAHVLKWGFFWN-----PFCASNLVATCALSHWGSMDYACSIFRQID---EPGAFD- 98
++ HA LK GF PF A L++ A G +D A S+FR PG D
Sbjct: 192 REAHAFALKRGFLDEGRERFPFNA--LLSMYA--RLGLVDDAQSLFRTTAAAFSPGGGDV 247
Query: 99 --FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+NT+I V+ EA+ + +M GV PD TF + AC++L+ L G ++H
Sbjct: 248 VTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAV 307
Query: 157 VFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS--VASWSAIIAAHASNGLW 213
V K + FV ++L++MY EKV A +F + + S + W+A+I +A G+
Sbjct: 308 VLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMD 367
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+LF M E P E+ + VL AC + HG +++ A N V+ +
Sbjct: 368 EEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNA 427
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-------- 325
L+DMY + G ++ +F M+ + ++++ +I+G + G EA + +EM
Sbjct: 428 LMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPS 487
Query: 326 ----LREGLE----PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
EG P+++ + +L C+ G + + + + +V
Sbjct: 488 SSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHG-YAVRHALESDIAVGSALV 546
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
D+ + G L + + +P ++N + W L+ A +H
Sbjct: 547 DMYAKCGCLAASRAVFDRLP-RRNVITWNVLIMAYGMH 583
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKC--EKVEFA 185
D+F P K+ A L+ + +H + V N+L+ Y +C A
Sbjct: 62 DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+ + S++++I+A W L +M E LVSVL AC+H
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181
Query: 246 LGALD---LGKCTHG-SLIRNI--SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L D LG+ H +L R +L+ MY + G ++ LFR A
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241
Query: 300 ------LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+T++ MIS L G+ EA+ + +M+ G+ PD V + L ACS
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACS 293
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 309/527 (58%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F + F + ++ G+++ EEA E+F+R E + ++ A+
Sbjct: 259 GEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEA----RELFDRMPERNEVSWNAML 314
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ E +++ +F V ++ N++I Y +C K+ A +F +M ++
Sbjct: 315 AGYVQ----GERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 370
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+IA ++ +G E L+LF M E R S S LS C + AL+LGK HG
Sbjct: 371 SWAAMIAGYSQSGHSYEALRLFVLMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGR 429
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ V +L+ MY KCG +E+ LF+ MA K ++++ MI+G + HG G+EA
Sbjct: 430 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEA 489
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L F M REGL+PDD V VLSACSH GLV++G F M +Y + P QHY C+VD
Sbjct: 490 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVD 549
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG+L EA L+++MP + + +W +LL AS+VH N E+ E AA +F + +
Sbjct: 550 LLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 609
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW DV K+R M KG+ + PG+S +E+ K + F D HP D I
Sbjct: 610 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 669
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ + ++ ++K GY S VL DV+E+EK ++ HS++LA+A+ ++ +S G PIR+
Sbjct: 670 FAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 729
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K ++ + R II+RD RFH FKDG+CSC DYW
Sbjct: 730 IKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 30/352 (8%)
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
VA + G A +F+++ + +N +I G+++ EFE A L++EM ER
Sbjct: 64 VAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPER---- 119
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D ++ + K + + L + ++ F+ E D+ N++++ Y + V+ A +F
Sbjct: 120 DLVSWNVMIKGYVRNRNLGKAREL----FERMPERDVCSWNTILSGYAQNGCVDDARRVF 175
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+M +K+ SW+A+++A+ N E LFG N W LVS C G +
Sbjct: 176 DRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSREN---W-----ALVSW--NCLLGGFV 225
Query: 250 DLGKCTHG-SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
K ++ +V+ ++I Y + G +++ LF T++ M+SG
Sbjct: 226 KKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSG 285
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
+ +EA +F M E ++V + +L+ V FD M
Sbjct: 286 YIQNRMVEEARELFDRM----PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR----- 336
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA-SKVHHNLE 419
V + ++ + G + EA L MP +++ V W ++++ S+ H+ E
Sbjct: 337 NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSYE 387
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 124/296 (41%), Gaps = 46/296 (15%)
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ D+ N I+ Y + + A +FK+M + S S++A+I+ + NG + LF E
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M PE ++ + ++ +LGK L + +V +++ Y + G
Sbjct: 116 M-------PERDLVSWNVMIKGYVRNRNLGKARE--LFERMPERDVCSWNTILSGYAQNG 166
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF-------------------- 322
C++ +F M +K ++++ ++S + + +EA +F
Sbjct: 167 CVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVK 226
Query: 323 ------SEMLREGLEPDDVV-YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ + ++ DVV + +++ + G ++E FD + T G
Sbjct: 227 KKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGY 286
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
+ + M+ EA EL MP ++N+V W ++L+ +E+ AK LF +
Sbjct: 287 IQNR-----MVEEARELFDRMP-ERNEVSWNAMLAGYVQGERVEM----AKELFDV 332
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 327/555 (58%), Gaps = 5/555 (0%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
++ KK+HA V++ GF + L+ L G M YA +F ++ +P F +NTL +
Sbjct: 25 KQLKKIHAVVIRTGFSEKNSLLTQLLENLVLV--GDMCYARQVFDEMPKPRIFLWNTLFK 82
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+V+ E++ LY +M + GV PD FT+P + KA ++L L G+ +H HV K GFEC
Sbjct: 83 GYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHVLKNGFEC 142
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V L+ MY K ++ A +F+ M K + +W+A IA G + L+ F +M
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMC 202
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + + +VS+LSAC LG+LD+G+ + + N+IVE + +DM++KCG
Sbjct: 203 ADAV-QFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENARLDMHLKCGST 261
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
E LF M + +++S MI G AM+G EAL++F+ M EGL P+ V ++GVLSAC
Sbjct: 262 EAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYVTFLGVLSAC 321
Query: 345 SHAGLVNEGLLCFDRMKL--EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
SHAGLVNEG F M + + P +HY C+VDL+GR+G+L EA E I+ M ++ +
Sbjct: 322 SHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMRVEPDT 381
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+W +LL A VH ++ +G+ A L + S +VLLSN+YA A +W V K+R++M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G + +S VE K++ F D SHP IYE + ++ +++ GY PD V
Sbjct: 442 RKLGTKKVAAYSSVEFDGKIHFFNRGDISHPQSKAIYEKLDEILKKIRNMGYVPDTGSVF 501
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DV+ +EK L HS+KLAIAF LI+ G PIR+ +NLR C+DCH ++K +S + RE
Sbjct: 502 HDVEMEEKESSLSHHSEKLAIAFGLINGRAGHPIRVMKNLRTCDDCHVFSKFVSRLTSRE 561
Query: 583 IIVRDRKRFHRFKDG 597
II+RD+ RFH F++G
Sbjct: 562 IIMRDKNRFHHFRNG 576
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 330/572 (57%), Gaps = 6/572 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV-ATCALSHWGSMDYACSIFRQIDE 93
+T KNLE+ +K+HAH+ F + F ++L+ C S+ A ++F Q+
Sbjct: 58 ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCR---SVLDARNVFDQMRR 114
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +LI G+ + EA+ L M + +P+ FTF +L KA G QI
Sbjct: 115 KDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQI 174
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K G+ D++V ++L++MY +C K++ A+A+F ++D K+ SW+A+I+ A G
Sbjct: 175 HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
L F EM + SV S+ LGAL+ GK H +I++ L V +
Sbjct: 235 ESALMTFAEMLRNG-FEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNT 293
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+DMY K G + +F + +K +T++ M++ A +G GKEA+S F EM + G+ +
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLN 353
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++ +L+ACSH GLV EG F+ MK EY + P + HY VV L+GRAG+L AL I
Sbjct: 354 QITFLCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHYVTVVALLGRAGLLNYALVFI 412
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MP++ VW +LL+A ++H N ++G+ AA ++F+++ VLL N+YA +W
Sbjct: 413 FKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQWD 472
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
A++R M + G+ + P S VE+ V+ FV+ D +HP + IY+M ++ +++ EG
Sbjct: 473 AAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKEG 532
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y PD+ VL VD+ EK L+ HS+KLA+AFALI + G+ IRI +N+R+C DCH+ K
Sbjct: 533 YVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAFK 592
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS ++ REI+VRD RFH F G+CSC DYW
Sbjct: 593 YISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 3/285 (1%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+ P + + ACA+ + L++ +IH H+ F D F+ NSLI+MY KC V A
Sbjct: 47 LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F QM +K + SW+++IA +A N + E + L M + ++P S+L A
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGR-FKPNGFTFASLLKAAGAY 165
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
G+ H ++ +V V ++L+DMY +CG ++ +F + K ++++ +I
Sbjct: 166 ADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALI 225
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
SG A G G+ AL F+EMLR G E Y V S+ + G + +G + ++ R
Sbjct: 226 SGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHV-IKSRQ 284
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
T ++D+ ++G + +A ++ + ++ V W S+L+A
Sbjct: 285 KLTAFVGNTLLDMYAKSGSMIDARKVFDRVD-NKDLVTWNSMLTA 328
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 323/565 (57%), Gaps = 8/565 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
++ + +++ A + G+ + + L+ S GS++ A +F ++ +NT+
Sbjct: 178 DISQGREIEARTVASGYASDSIVQNALINM--YSKCGSLESARKVFDRLKNRDVIAWNTM 235
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I G+ K+ +AL L+ M +P+ TF L AC L+ L++G IH V + G+
Sbjct: 236 ISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGY 295
Query: 163 ECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
E DL + N L+NMY KC +E A +F++M + V +W+ +I A+ G + L +F
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFK 355
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M E P E L +VLSAC LGA GK H + +V++E SL++MY +C
Sbjct: 356 QMQLENV-APNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G L+ + +F + DK +++S +I+ A HG + L F E+L+EGL DDV V L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SACSH G++ EG+ F M ++ + P +H+ C+VDL+ RAG L A LI MP +
Sbjct: 475 SACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP-SDYVLLSNMYARAQRWYDVAKIRT 460
V W SLLS K+H++ + A LF++ S S LLSN+YA A RW DV K R
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN 594
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
A++ ++PG S +E+ V++FV+ D+SHP + I I ++ Q+K GY PD+
Sbjct: 595 RRAAR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRM 651
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL +V E+EK + L HS+KLAIA+ LI G+P+ I +NLR C DCH K IS I
Sbjct: 652 VLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVG 711
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
R+I+VRD RFH F++G+CSC+DYW
Sbjct: 712 RKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 197/397 (49%), Gaps = 20/397 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+ + + K+L++ + +HA +L+ ++ + L+ A ++ A F ++ +
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCR--DLELARKTFDEMGK 122
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFER---GVEPDNFTFPALFKACAKLQALKEG 150
+N LI G+ + + AL +Y +M + G++PD TF + AC + + +G
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQG 182
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+I G+ D VQN+LINMY KC +E A +F ++ + V +W+ +I+ +A
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G ++ L+LF M +P + +L+ACT+L L+ G+ H + + ++++
Sbjct: 243 GAATQALELFQRMGPNDP-KPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVI 301
Query: 271 ETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
L++MY KC LE+ +F M + +T++++I +GQ K+AL IF +M E
Sbjct: 302 GNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN 361
Query: 330 LEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+ P+++ VLSAC+ G +G L+ R K + V ++++ R G
Sbjct: 362 VAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKAD------VVLENSLMNMYNRCG 415
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
L + + + ++ ++ V W +L++A H + G
Sbjct: 416 SLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 146/278 (52%), Gaps = 3/278 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+ A ++F I+ P + + ++ F + + EAL Y M G+ PD F
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 139 KACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
C+ + LK+G +H + + E D+ + +LI MY +C +E A F +M +K++
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+W+A+IA ++ NG LK++ +M + + +P+ S L ACT +G + G+
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREI 185
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+ + A + IV+ +LI+MY KCG LE +F + ++ + ++ MISG A G
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+AL +F M +P+ V ++G+L+AC++ + +G
Sbjct: 246 TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQG 283
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 126/248 (50%), Gaps = 21/248 (8%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MYGKC V A A+F ++ + SW+ I+AA A NG + E L + M E RP+ +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGL-RPDGA 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+ V + C+ L G+ H ++ + ++I+ T+LI MY +C LE F
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR---EGLEPDDVVYVGVLSACSHAGLV 350
M K +T++ +I+G + +G + AL I+ +M+ EG++PD + + L AC+ G +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 351 NEGLLCFDRMKLEYRIVPT-------VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
++G ++E R V + VQ+ ++++ + G L A ++ + ++ +
Sbjct: 180 SQG------REIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVI 230
Query: 404 VWRSLLSA 411
W +++S
Sbjct: 231 AWNTMISG 238
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 324/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEE----FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L+ C +L ++HA +K G + F ++ L+ + S G M+ A +F
Sbjct: 1012 SVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKS--GKMEEAEFLFVNQ 1069
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D +N ++ G++ +F +AL LY M E G + T KA L LK+G
Sbjct: 1070 DGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGK 1129
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QI V K GF DLFV + +++MY KC ++E A IF ++ +W+ +I+ NG
Sbjct: 1130 QIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENG 1189
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + M K +P+E +++ AC+ L AL+ G+ H + ++ A + V
Sbjct: 1190 QEEHALFTYHHMRLSKV-QPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVM 1248
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
TSL+DMY KCG +E LF+ +++ MI GLA HG +EAL F EM G+
Sbjct: 1249 TSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVT 1308
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V ++GVLSACSH+GLV+E F M+ Y I P ++HY C+VD + RAG + EA +
Sbjct: 1309 PDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEK 1368
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I SMP + + ++R+LL+A +V + E G+ A+ L + + YVLLSN+YA A +
Sbjct: 1369 VISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQ 1428
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W +VA R M + + PGFS V++ KV+ FV+ DRSH D IY + + +++
Sbjct: 1429 WENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIRE 1488
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY PD L DV+E++K L HS+KLAIA+ L+ + +R+ +NLR+C DCH
Sbjct: 1489 EGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNA 1548
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS ++ERE+++RD RFH F+ G CSC DYW
Sbjct: 1549 IKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 185/390 (47%), Gaps = 14/390 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQI 91
L+++ LE K++H V++ G + + V C ++ + GS+ A ++F Q+
Sbjct: 913 LSVVAGLNCLELGKQIHGIVVRSGL--DQVVS---VGNCLINMYVKTGSVSRARTVFWQM 967
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEG 150
+E +NT+I G E ++ ++ ++ G+ PD FT ++ +AC+ L
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
QIH K G D FV +LI++Y K K+E A +F D +ASW+A++ + +
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + + L+L+ M E R + L + A L L GK +++ L++ V
Sbjct: 1088 GDFPKALRLYILM-QESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFV 1146
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ ++DMY+KCG +E +F + + ++ MISG +GQ + AL + M +
Sbjct: 1147 ISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKV 1206
Query: 331 EPDDVVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+PD+ + ++ ACS + +G + + +KL P V +VD+ + G + +A
Sbjct: 1207 QPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMT--SLVDMYAKCGNIEDA 1264
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
L + + W +++ H N E
Sbjct: 1265 RGLFKRTNTSR-IASWNAMIVGLAQHGNAE 1293
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 145/323 (44%), Gaps = 22/323 (6%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N + F++ E EA+ + +M V D TF + A L L+ G QIHG V
Sbjct: 874 WNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVV 933
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+ G + + V N LINMY K V A +F QM++ + SW+ +I+ A +GL +
Sbjct: 934 RSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVG 993
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+F ++ P++ + SVL AC+ L G L H ++ L+ V T+LID+
Sbjct: 994 MFVDLLRGGLL-PDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDV 1052
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y K G +E+ LF +++ M+ G + G +AL ++ M G + +
Sbjct: 1053 YSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITL 1112
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML------GE--- 388
A GLV +K +I V G +DL +G+L GE
Sbjct: 1113 ANAAKAA--GGLVG--------LKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMES 1162
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
A + +P +DV W +++S
Sbjct: 1163 ARRIFNEIP-SPDDVAWTTMISG 1184
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 26/301 (8%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +H + +K G W+ F A LV A +G + A +F + +N +++ +V
Sbjct: 747 ESLHGYAVKIGLQWDVFVAGALVNIYA--KFGRIREARVLFDGMGLRDVVLWNVMMKAYV 804
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
EAL L++E G+ PD+ T L + Q + E
Sbjct: 805 DTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLE------------------ 846
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
Q + YG K+ D V +W+ ++ G E + F +M N +
Sbjct: 847 WQLKQLKAYGT--KLFMYDDDDDGSD---VIAWNKTLSWFLQRGETWEAVDCFVDMINSR 901
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ V +LS L L+LGK HG ++R+ V V LI+MYVK G + +
Sbjct: 902 V-ACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRA 960
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M + ++++ MISG A+ G + ++ +F ++LR GL PD VL ACS
Sbjct: 961 RTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSL 1020
Query: 348 G 348
G
Sbjct: 1021 G 1021
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS--VASWSAII 204
L G + H + G D F+ N+LI MY KC + A +F S + +W+AI+
Sbjct: 642 LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+AHA + LF + L V C + + HG ++
Sbjct: 702 SAHADKA--RDGFHLF-RLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGL 758
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+V V +L+++Y K G + + LF M + + ++VM+ G EAL +FSE
Sbjct: 759 QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818
Query: 325 MLREGLEPDDVV 336
R GL PDDV
Sbjct: 819 FNRTGLRPDDVT 830
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 166/423 (39%), Gaps = 53/423 (12%)
Query: 3 RTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILK---TCKNLEEFKKVHAHVLKWGF 59
+ +++H L P P +L + +IL+ +L K+ HA +L G
Sbjct: 598 KPALMHLRLRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGH 657
Query: 60 FWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALF 117
+ F +NL+ S GS+ A +F + +N ++ + +
Sbjct: 658 HPDRFLTNNLITM--YSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKAR--DGFH 713
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
L+ + V T +FK C + +HG+ K+G + D+FV +L+N+Y
Sbjct: 714 LFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYA 773
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
K ++ A +F M + V W+ ++ A+ GL E L LF E N RP++ L
Sbjct: 774 KFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGL-RPDDVTL- 831
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
CT L R + + ++E L + G LF D
Sbjct: 832 -----CT--------------LARVVKSKQNVLEWQLKQLKA------YGTKLFMYDDDD 866
Query: 298 CQ---LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+ ++ +S G+ EA+ F +M+ + D + +V +LS + GL
Sbjct: 867 DGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVA-------GL 919
Query: 355 LCFDRMKLEYRIV------PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
C + K + IV V C++++ + G + A + M + + V W ++
Sbjct: 920 NCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-EVDLVSWNTM 978
Query: 409 LSA 411
+S
Sbjct: 979 ISG 981
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 338/596 (56%), Gaps = 43/596 (7%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI--DEPGAFDFNTL 102
K VH +K F + F ++L+ A+C G +D A +F I + +N++
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYASC-----GHLDLAYLVFEMIEGNNKDIVSWNSM 314
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ GFV+ ++AL L+ M GV P+ T ++ ACAK L G ++ ++ +
Sbjct: 315 VTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEM 374
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA-------------- 208
+L V N+ I+M+ KC +VE A +F M+++ V SW+ II +A
Sbjct: 375 MMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDS 434
Query: 209 -----------------SNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALD 250
+G E L +F E+ K RP++ L+S LSAC LGA+D
Sbjct: 435 MPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMD 494
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
+G+ HG + + LN + TSLIDMY K G +EK + +F + +K +S MI+GLA
Sbjct: 495 IGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLA 554
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
MHG+G+ A+ +F +M ++P+ V + +L ACSH+GLV+EG FD M+ Y +VP
Sbjct: 555 MHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKT 614
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HY C+VD++GRAG L EAL+ I+ MP+ + VW +LL A +H NLE+ E A L +
Sbjct: 615 KHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLE 674
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
I + YVLLSN+YA+ W V+++R +M GL + G S +E+ V++F+ D
Sbjct: 675 IEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDN 734
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIH 549
+HP +IY + ++ +L+ GY + +L+ V+E+E +E+ LK HS+K+AIAF LI
Sbjct: 735 AHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIR 794
Query: 550 LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCHT K++S +Y R+I++RDR RFH F G CSC+DYW
Sbjct: 795 ADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 206/431 (47%), Gaps = 45/431 (10%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+ + C + ++ K++HA +L+ +P+ AS L A S + ++DYA +F QI +P
Sbjct: 144 ALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPN 203
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+ +N LIR + +++ ++ M + P+ FTFP L KA A+ + G +H
Sbjct: 204 LYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVH 263
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIAAHASNGL 212
G K F D+FV NSLI+ Y C ++ A +F+ + + K + SW++++ G
Sbjct: 264 GMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGY 323
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L LF M NE P +VSV+SAC L LG+ + RN +N+ V
Sbjct: 324 PDKALDLFERMRNEGV-HPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCN 382
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYS----------------------------- 303
+ IDM+VKCG +E LF M + ++++
Sbjct: 383 ATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPA 442
Query: 304 --VMISGLAMHGQGKEALSIFSE--MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
V+ISG G+ KEAL+IF E + + G PD V + LSAC+ G ++ G
Sbjct: 443 WNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGY 502
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNL 418
+K E RI ++D+ ++G + +A+E+ S I DV VW ++++ +H
Sbjct: 503 IKKE-RIQLNRNLATSLIDMYSKSGDVEKAIEVFHS--IGNKDVFVWSAMIAGLAMHGRG 559
Query: 419 EIGEIAAKNLF 429
E AA LF
Sbjct: 560 E----AAIELF 566
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/524 (38%), Positives = 317/524 (60%), Gaps = 2/524 (0%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKAC 141
YA IF + ++ +I G+V +EAL L+++M + ++P T ++ +AC
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
AKL L G ++H ++ K+G D+ + N+L++MY KC ++ A F M+ K S+S
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFS 382
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
AI++ NG + L +F M P+ + ++ VL AC+HL AL G C+HG LI
Sbjct: 383 AIVSGCVQNGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 441
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
A + ++ +LIDMY KCG + +F M ++++ MI G +HG G EAL +
Sbjct: 442 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F ++L GL+PDD+ ++ +LS+CSH+GLV EG L FD M ++ IVP ++H C+VD++G
Sbjct: 502 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 561
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG++ EA I++MP + + +W +LLSA ++H N+E+GE +K + + ++VL
Sbjct: 562 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVL 621
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+Y+ A RW D A IR GL + PG S +E+ V+ FV D+SH I
Sbjct: 622 LSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRK 681
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ ++K GY + S V +DV+E+EK + L HS+KLAIAF +++L G PI + +N
Sbjct: 682 LEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKN 741
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR+C DCH K ++VI +REI VRD RFH FK+GTC+C D+W
Sbjct: 742 LRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 164/322 (50%), Gaps = 21/322 (6%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS----- 86
L +L+ C K+L E KK+H H LK ++ + L + +C+
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLK---------NTSNADSSVLHKLTRLYLSCNQVVLA 62
Query: 87 --IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F +I P +N +IR + F+ A+ LY+ M GV P+ +T+P + KAC+ L
Sbjct: 63 RRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGL 122
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
A+++G++IH H G E D+FV +L++ Y KC + A +F M + V +W+A+I
Sbjct: 123 LAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMI 182
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A + GL + ++L +M E P S +V VL AL GK HG +R
Sbjct: 183 AGCSLYGLCDDAVQLIMQMQEEGIC-PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF 241
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
V+V T L+DMY KC CL +F +M + ++++S MI G KEAL +F +
Sbjct: 242 DNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQ 301
Query: 325 M-LREGLEPDDVVYVGVLSACS 345
M L++ ++P V VL AC+
Sbjct: 302 MILKDAMDPTPVTLGSVLRACA 323
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 184/386 (47%), Gaps = 15/386 (3%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ 90
+LK C L E+ ++H+H +G + F + LV A C G + A +F
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC-----GILVEAQRLFSS 169
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ +N +I G ++A+ L +M E G+ P++ T + + +AL G
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG 229
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+HG+ + F+ + V L++MY KC+ + +A IF M ++ SWSA+I + +
Sbjct: 230 KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXS 289
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
E L+LF +M + P L SVL AC L L G+ H +I+ L++++
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILL 349
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+ MY KCG ++ + F M K +++S ++SG +G ALSIF M G+
Sbjct: 350 GNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGI 409
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD +GVL ACSH + G + + T+ ++D+ + G + A
Sbjct: 410 DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI-CNALIDMYSKCGKISFAR 468
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVH 415
E+ M ++D+V W +++ +H
Sbjct: 469 EVFNRM--DRHDIVSWNAMIIGYGIH 492
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 122/232 (52%), Gaps = 6/232 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C L + +K+H +++K G + + L++ A G +D A F ++
Sbjct: 317 SVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA--KCGVIDDAIRFFDXMN 374
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ F+ ++ G V+ AL ++ M G++PD T + AC+ L AL+ G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
HG++ GF D + N+LI+MY KC K+ FA +F +MD+ + SW+A+I + +GL
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
E L LF ++ +P++ + +LS+C+H G + G+ ++ R+ S
Sbjct: 495 GMEALGLFHDLLALG-LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/580 (37%), Positives = 327/580 (56%), Gaps = 43/580 (7%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN +S++ + G +D A F Q+ E +N +I G+ + EAL +++
Sbjct: 214 WNTMISSHMQS-------GLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFS 266
Query: 121 EMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
+M + +PD FT + ACA L+ LK G QIH H+ + F+ V N+LI+MY K
Sbjct: 267 KMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS 326
Query: 180 EKVEFASAIFKQ---------------------------------MDQKSVASWSAIIAA 206
VE A I +Q + + V +W+A+I
Sbjct: 327 GGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVG 386
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NG + ++LF M E +P L ++LS + L +LD G+ H S R+ +A
Sbjct: 387 YVQNGFNQDAMELFRSMIKEGP-KPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNAS 445
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+V V +LI MY K G + +F ++ + +T++ MI LA HG G+EAL++F M
Sbjct: 446 SVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERM 505
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
L G++PD + YVGVLSAC+H GLV +G ++ M+ ++I+PT HY C++DL GRAG+
Sbjct: 506 LENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGL 565
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L EA I++MPI+ + + W SLL++ KVH N+E+ E+AA+ L I + Y L+N+
Sbjct: 566 LQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANV 625
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
Y+ +W + A IR M KG+ + GFS V++ KV+ F D HP D IYEM+ ++
Sbjct: 626 YSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKI 685
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
++K G+ PD VL D++E+ K + L HS+KLAIAF LI + + +RI +NLR+C
Sbjct: 686 WKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVC 745
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NDCH+ K IS + REIIVRD RFH FK+G CSCRDYW
Sbjct: 746 NDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 202/499 (40%), Gaps = 105/499 (21%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL 69
S +LT P +P L LK ++ T K +HA ++K G F +NL
Sbjct: 6 SQILTSPSDPYTS-FLQRSLKFKDPFT----------GKSIHARIIKAGLHLGVFLMNNL 54
Query: 70 -----------------------------VATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
+ + G ++ A +F ++ EP + +
Sbjct: 55 MNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWT 114
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+I G+ + +FE A+ ++ EM V P FT + +CA ++ L G ++H V K
Sbjct: 115 AMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKH 174
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL-------- 212
G + V NSL+NMY K A +F +M KS +SW+ +I++H +GL
Sbjct: 175 GLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQF 234
Query: 213 ----------WS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
W+ E L +F +M + +P++ L S LSAC +L L
Sbjct: 235 EQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENL 294
Query: 250 DLGKCTHGSLIRN---------------------------------ISALNVIVETSLID 276
LGK H +IR IS L+VI T+L+D
Sbjct: 295 KLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLD 354
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
YVK G + +F + + + ++ MI G +G ++A+ +F M++EG +P++
Sbjct: 355 GYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYT 414
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+LS S ++ G +V ++ + ++G + +A + +
Sbjct: 415 LATMLSVSSSLASLDHGRQIHASATRSGN-ASSVSVSNALITMYAKSGSINDARWVFNLI 473
Query: 397 PIQQNDVVWRSLLSASKVH 415
+++ + W S++ A H
Sbjct: 474 HWKRDTITWTSMIIALAQH 492
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 47/300 (15%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ-- 90
+ L C NLE K ++HAH+++ F + F A S G ++ A I Q
Sbjct: 283 SALSACANLENLKLGKQIHAHIIRTEF--DTFGAVGNALISMYSKSGGVEIAQKIIEQSM 340
Query: 91 IDEPGAFDFNTLIRGFVKEVEF-------------------------------EEALFLY 119
I F L+ G+VK + ++A+ L+
Sbjct: 341 ISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELF 400
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
M + G +P+N+T + + L +L G QIH + G + V N+LI MY K
Sbjct: 401 RSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKS 460
Query: 180 EKVEFASAIFKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
+ A +F + ++ +W+++I A A +GL E L LF M E +P+ V
Sbjct: 461 GSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERM-LENGIKPDHITYVG 519
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETS----LIDMYVKCGCLEKGLCLFRMM 294
VLSACTH+G ++ G+ + +L++N A +I S +ID++ + G L++ M
Sbjct: 520 VLSACTHVGLVEQGRSYY-NLMQN--AHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENM 576
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 61/272 (22%)
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++++ + N+I+ Y K G LE+ +F M + ++++ MI G GQ + A+
Sbjct: 76 VKSVFSWNIILSG-----YAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAI 130
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGL-------------- 354
+F EM+ + + P VL++C+ H+ +V GL
Sbjct: 131 GMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMY 190
Query: 355 ----------LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ FDRMKL+ + + ++ ++G++ A + M I+++ V
Sbjct: 191 AKSGDPVTAKIVFDRMKLK-----STSSWNTMISSHMQSGLVDLAQVQFEQM-IERDVVS 244
Query: 405 WRSLLSASKVH-HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ-------RWYDVA 456
W +++S H + E +I +K L +S P + L S + A A +
Sbjct: 245 WNAMISGYNQHGFDREALDIFSKMLMD-SSSKPDKFTLASALSACANLENLKLGKQIHAH 303
Query: 457 KIRTEMASKGLNQSPGFSL------VEVARKV 482
IRTE + G + S+ VE+A+K+
Sbjct: 304 IIRTEFDTFGAVGNALISMYSKSGGVEIAQKI 335
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/585 (37%), Positives = 321/585 (54%), Gaps = 21/585 (3%)
Query: 36 TILKTCKNLEEFKKVHA--HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++L L +K+ HA H L + A L L H ++ +A + R +
Sbjct: 18 SLLPHLSTLSHYKQFHARLHALGTLHSYPSLRARFLDRLALLPHADALPHALLLLRSLPY 77
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-----DNFTFPALFKACAKLQALK 148
P DFN +RG +L L P D + KA A+
Sbjct: 78 PATNDFNAALRGLAASPHPARSLLLLAGRLLPAPAPPRPRLDALSLSFALKATARCSDAF 137
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+Q+H + ++G D+ + +L++ Y KC + A +F +M + VA+W+A++A A
Sbjct: 138 ATLQLHAILVRLGVAADVRLMTTLLDSYAKCGDLASARRVFDEMSVRDVATWNALLAGLA 197
Query: 209 SNGLWSECLKLFGEMNNE-----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
+ L LF + P E +V+ LSAC LGAL G H R I
Sbjct: 198 QGTEPNLALVLFRRLAGSFRELPPREEPNEVTVVAALSACAQLGALKDGLAAH-DFARTI 256
Query: 264 SAL-NVIVETSLIDMYVKCGCLEKGLCLFR--MMADKCQLTYSVMISGLAMHGQGKEALS 320
A+ NV V +LIDMY KCG L + L +F + D+ ++Y+ I L+MHG G++AL
Sbjct: 257 GAVGNVRVCNALIDMYSKCGSLSRALEVFHSIKLEDRTLVSYNATIQALSMHGHGEDALK 316
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM +EPD+V Y+ VL C+HAGLV++G FD M R+ P ++HYG +VDL+
Sbjct: 317 LFDEMPAR-IEPDEVTYLAVLGGCNHAGLVDDGRRVFDSM----RVPPNMKHYGTIVDLL 371
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG L EA ++I MP + V+W++LL A+K+H N+++ E+AA L + S+ DYV
Sbjct: 372 GRAGRLAEAHDMIMHMPFPADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYV 431
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ H W IY
Sbjct: 432 LLSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHLRWREIYR 491
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ ++ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G IR+ +
Sbjct: 492 ALDEIGSKICELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIK 551
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH KLIS Y R II+RDR RFH+F+DG CSCRDYW
Sbjct: 552 NLRICGDCHVVAKLISKAYGRVIIIRDRARFHQFEDGQCSCRDYW 596
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 336/576 (58%), Gaps = 13/576 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
T+LK C K L + + VHAH+L+ F + + N+ A C GS++ A +F
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-----GSLEEARKVFE 119
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + + TLI G+ + +AL +N+M G P+ FT ++ KA A +
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+HG K GF+ ++ V ++L+++Y + ++ A +F ++ ++ SW+A+IA HA
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L+LF M + +RP S+ AC+ G L+ GK H +I++ L
Sbjct: 240 RSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+DMY K G + +F +A + ++++ +++ A HG GKEA+ F EM R G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+++ ++ VL+ACSH+GL++EG ++ MK + IVP HY VVDL+GRAG L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L I+ MPI+ +W++LL+A ++H N E+G AA+++F+++ P +V+L N+YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW D A++R +M G+ + P S VE+ ++ FV+ D HP + I ++ ++
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY PD S V+ VD+ E+ L+ HS+K+A+AFAL++ GS I I +N+R+C DCH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T KL S + REIIVRD RFH FKDG CSC+DYW
Sbjct: 598 TAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERG---------VEPDNFTFPALFKACAKLQALKE 149
N+L ++ E E F N++ R + D + L K C + L +
Sbjct: 19 LNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQ 78
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G +H H+ + F D+ + N+L+NMY KC +E A +F++M Q+ +W+ +I+ ++
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ + L F +M + P E L SV+ A G HG ++ NV
Sbjct: 139 HDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V ++L+D+Y + G ++ +F + + ++++ +I+G A ++AL +F MLR+G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
P Y + ACS G + +G M K ++V + ++D+ ++G + +
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSIHD 315
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A ++ + +++ V W SLL+A H
Sbjct: 316 ARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/627 (36%), Positives = 324/627 (51%), Gaps = 76/627 (12%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT 72
L QP P P + L L L+ +VHAH+L G S +VA
Sbjct: 58 LLQPLSAPGPPPI---LSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114
Query: 73 CALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNF 132
A S G +D + S+F I D F
Sbjct: 115 YASS--GDIDSSVSVFNGIG-------------------------------------DYF 135
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV---------- 182
TFP + K+ +L ++ G +HG + ++G + DL+V SLI +YGKC ++
Sbjct: 136 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195
Query: 183 ---------------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
+ A AIF++M +++ SW+ +I+ ++ +GL + L LF
Sbjct: 196 TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFD 255
Query: 222 EMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
EM E RP ++SVL AC L L+ G+ H R N V +L MY K
Sbjct: 256 EMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAK 315
Query: 281 CGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
CG L F + +K + ++ MI+ A +G G +A+S F EM++ G++PDD+ +
Sbjct: 316 CGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFT 375
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
G+LS CSH+GLV+ GL F+ M Y I P V+HY CV DL+GRAG L EA +L+ MP+
Sbjct: 376 GLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPM 435
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+W SLL+A + H NLE+ E AA+ LF + + +YVLLSNMYA A RW +V K+
Sbjct: 436 PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKL 495
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R + S+G +SPG S +E+ K + F+ D SHP IY + + ++K GY PD
Sbjct: 496 RAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDT 555
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
S VL D+ E+EK L HS+KLA+AF +++ + +R+ +NLR+C DCHT IS I
Sbjct: 556 SYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEI 615
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
Y RE+IVRD RFH FK G CSC DYW
Sbjct: 616 YGREVIVRDINRFHHFKGGCCSCGDYW 642
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/629 (34%), Positives = 344/629 (54%), Gaps = 48/629 (7%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF-----FWN---- 62
LL + ++PP NL + + + LEE KKVH H+ GF WN
Sbjct: 76 LLGRAKKPPASTYCNL-------IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 63 ---------------------PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
C+ N++ + G ++ A +F ++ E ++ +
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVN-GYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 102 LIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
++ G+VK+ + EEAL LY+ M P+ FT A A ++ ++ G +IHGH+ +
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G + D + +SL++MYGKC ++ A IF ++ +K V SW+++I + + W E LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
E+ C RP E VL+AC L +LGK HG + R +SL+DMY K
Sbjct: 308 SELVGS-CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 281 CGCLEKGLCLFRMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
CG +E + + D C ++++ +I G A +GQ EAL F +L+ G +PD V
Sbjct: 367 CGNIESA----KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V VLSAC+HAGLV +GL F + ++R+ T HY C+VDL+ R+G + +I M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P++ + +W S+L + N+++ E AA+ LF+I +P YV ++N+YA A +W +
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
K+R M G+ + PG S E+ RK + F++ D SHP ++ I E + ++ ++K EGY P
Sbjct: 543 KMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
S VL DV++++K E L HS+KLA+AFA++ +G+ I++ +NLR C DCH K IS
Sbjct: 603 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFIS 662
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +R+I VRD RFH F++G CSC DYW
Sbjct: 663 NITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 33/322 (10%)
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
++ R +P T+ L + C++ +AL+EG ++H H+ GF + + N L+ MY KC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW----------- 229
+ A +F +M + + SW+ ++ +A GL E KLF EM + +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 230 --RPEESILVSVL------------------SACTHLGALDLGKCTHGSLIRNISALNVI 269
+PEE++++ L +A + + GK HG ++R + +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ +SL+DMY KCGC+++ +F + +K ++++ MI + +E S+FSE++
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
P++ + GVL+AC+ G M P +VD+ + G + A
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
++ P + + V W SL+
Sbjct: 374 KHVVDGCP-KPDLVSWTSLIGG 394
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 317/571 (55%), Gaps = 4/571 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT +L+ + V G+ + F S L+ S G+M A +F +
Sbjct: 118 LTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHV--YSRCGAMGDAIRVFDGMPRK 175
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++T++ GFV EAL +Y+ M E GV D + +AC + G +H
Sbjct: 176 DHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVH 235
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G + G D+ + SL++MY K + A +F+ M ++ SW+A+I+ A NG
Sbjct: 236 GRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHAD 295
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L LF EM+ +P+ LVS L AC +G L LGK HG ++R + I+ T++
Sbjct: 296 EALDLFREMSTSG-LQPDSGALVSALLACADVGFLKLGKSIHGFILRRLE-FQCILGTAV 353
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG LE LF ++ + + ++ MI+ HG G +AL++F E+ G++PD
Sbjct: 354 LDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDH 413
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +LSA SH+GLV EG FDRM E+ I PT +H CVVDL+ R+G++ EA E++
Sbjct: 414 ATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLA 473
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SM + +W +LLS + LE+GE AK + + L+SN+YA A++W
Sbjct: 474 SMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDK 533
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V +IR M G + PG+SL+EV + FV +D+SHP I +MI ++ ++++ GY
Sbjct: 534 VREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGY 593
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P V D+DED K + L HS++LAIAF L++ S G+ + I +NLR+C DCH K
Sbjct: 594 VPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKY 653
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I +REI+VRD KRFH FKDG CSC DYW
Sbjct: 654 ISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 148/290 (51%), Gaps = 8/290 (2%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
PD+ TF ACA+L L + F G+ D+FV ++L+++Y +C + A
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIR 167
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F M +K +WS ++A S G E L ++ M E +E ++V V+ ACT G
Sbjct: 168 VFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRM-REHGVAEDEVVMVGVIQACTLTG 226
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+G HG +R+ ++V++ TSL+DMY K G + +FRMM + ++++ +IS
Sbjct: 227 NTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALIS 286
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYR 365
G A +G EAL +F EM GL+PD V L AC+ G + G + F +LE++
Sbjct: 287 GFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQ 346
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ V+D+ + G L A +L + ++ V+W ++++ H
Sbjct: 347 CILGT----AVLDMYSKCGSLESARKLFNKLS-SRDLVLWNAMIACCGTH 391
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 171 SLINMYGKCEKVEFASAIF--KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
SL Y + ++ A + + + +W+A++AA + G L++F + +
Sbjct: 49 SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALPSSA- 107
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
RP+ + L+AC LG LD + +V V ++L+ +Y +CG + +
Sbjct: 108 -RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAI 166
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M K + +S M++G G+ EAL ++S M G+ D+VV VGV+ AC+ G
Sbjct: 167 RVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTG 226
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
G R L + + V +VD+ + G A ++ + MP +N V W +L
Sbjct: 227 NTRMGASVHGRF-LRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPY-RNAVSWNAL 284
Query: 409 LSA 411
+S
Sbjct: 285 ISG 287
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 329/578 (56%), Gaps = 14/578 (2%)
Query: 35 LTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSI 87
+ +L C +L E+ K++HA +++ S++ + AL+ G++ A +
Sbjct: 250 MNVLSACGSLAALEKGKQIHAQIVESEHH------SDVRVSTALTKMYIKCGAVKDAREV 303
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + +NT+I G V + EEA +++ M + V PD T+ A+ ACA+ L
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G +IH K G D+ N+LINMY K ++ A +F +M ++ V SW+A++ +
Sbjct: 364 ACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGY 423
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A G E F +M + + + VL AC++ AL GK H +++ +
Sbjct: 424 ADCGQVVESFSTFKKMLQQGV-EANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFAD 482
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ V +L+ MY KCG +E + + M+ + +T++ +I GLA +G+G EAL F M
Sbjct: 483 LAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKS 542
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
E + P+ +V V+SAC LV EG F M+ +Y IVPT +HY C+VD++ RAG LG
Sbjct: 543 EEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLG 602
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA ++I +MP + + +W +LL+A + H N+EIGE AA+ ++ + YV LS +YA
Sbjct: 603 EAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYA 662
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
A W DVAK+R M +G+ + PG S +EVA +V+ FV+ D+SHP + IY + +
Sbjct: 663 AAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTK 722
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
Q+K GY PD V+ D+D++ K + HS+KLAIA+ LI +PIR+++NLR+C D
Sbjct: 723 QIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTD 782
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CHT TK IS I REII RD RFH FK+G CSC DYW
Sbjct: 783 CHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 201/383 (52%), Gaps = 14/383 (3%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L++C K+L K+VH H+L++G N + + L+ H GS++ A +F +
Sbjct: 48 VKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKL--YVHCGSVNEARRLFDKF 105
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N +I G+ +EA L+ M + G+EPD FTF ++ AC+ AL G
Sbjct: 106 SNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGR 165
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H V + G + V N+LI+MY KC V A +F M + SW+ + A+A +G
Sbjct: 166 EVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESG 225
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E LK + M E RP ++VLSAC L AL+ GK H ++ + +V V
Sbjct: 226 YAQESLKTYHAMLQEGV-RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVS 284
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L MY+KCG ++ +F + ++ + ++ MI GL GQ +EA +F ML+E +
Sbjct: 285 TALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVA 344
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRM---KLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
PD V Y+ +LSAC+ G GL C + ++ +V V+ ++++ +AG + +
Sbjct: 345 PDRVTYLAILSACARPG----GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
A ++ MP +++ V W +L+
Sbjct: 401 ARQVFDRMP-KRDVVSWTALVGG 422
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 152/295 (51%), Gaps = 13/295 (4%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
+ ++G + D++ + L ++C K + L G Q+H H+ + G + ++++ N+L+ +Y C
Sbjct: 35 LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGS 94
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V A +F + KSV SW+ +I+ +A GL E LF M E P++ VS+LS
Sbjct: 95 VNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGL-EPDKFTFVSILS 153
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC+ AL+ G+ H ++ A N V +LI MY KCG + +F MA + +++
Sbjct: 154 ACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVS 213
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ + A G +E+L + ML+EG+ P + Y+ VLSAC + +G +
Sbjct: 214 WTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG------KQ 267
Query: 362 LEYRIVPTVQHYGCVVD-----LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ +IV + H V + + G + +A E+ + +P ++ + W +++
Sbjct: 268 IHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLP-NRDVIAWNTMIGG 321
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/609 (34%), Positives = 337/609 (55%), Gaps = 41/609 (6%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++ C L +F K +H VL GF + + + L+ + +D A +F ++
Sbjct: 120 SVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDM--YCRFNDLDKARKVFEEMP 177
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE------PDNFTFPALFKACAKLQA 146
+N+LI G+ + EAL +Y + + +E PD T ++ +AC L
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGD 237
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L+ G +H ++ G+ECD N LINMY KC + + +F M K SW+++I
Sbjct: 238 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 297
Query: 207 HASNGLWSECLKLFGEM----------------NNEKC--------------WRPEESIL 236
+ NG + LK+F M ++E C P+ + +
Sbjct: 298 YIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATM 357
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+S+L C+ L A GK HG + + +V V LI+MY KCG L +F++M
Sbjct: 358 LSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKT 417
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K +T++ +IS M+G+GK+A+ F EM G+ PD V +V ++ ACSH+GLV EGL
Sbjct: 418 KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNY 477
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F RMK +Y+I P ++HY CVVDL+ R+ +L +A + I SMP++ + +W +LLSA ++
Sbjct: 478 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 537
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
+ EI E ++ + ++N YVL+SN+YA +W V IR + ++GL + PG S +
Sbjct: 538 DTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 597
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
E+ KVY F + + ++ + +++ + + EGY ++ VL D+DEDEKR+ L G
Sbjct: 598 EIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCG 657
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS++LAIAF L++ G+P+++ +NLR+C DCHT TK IS I +RE++VRD RFH FKD
Sbjct: 658 HSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKD 717
Query: 597 GTCSCRDYW 605
G CSC DYW
Sbjct: 718 GACSCGDYW 726
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 174/335 (51%), Gaps = 18/335 (5%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP--G 95
L + + K+H+ ++ G + ++ L+A A H+ + S+FR + P
Sbjct: 23 LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYA--HFRDPTSSFSVFR-LASPSNN 79
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +N++IR F EAL LY+E ++PD +TFP++ ACA L + IH
Sbjct: 80 VYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHD 139
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
V +GF DL++ N+LI+MY + ++ A +F++M + V SW+++I+ + +NG W+E
Sbjct: 140 RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNE 199
Query: 216 CL-------KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
L KLF EM N+ ++P+ + S+L AC HLG L+ GK H +I + +
Sbjct: 200 ALEIYYQSIKLFMEMVNQ--FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDT 257
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
LI+MY KCG L +F M K ++++ MI+ +G+ ++L +F M
Sbjct: 258 TASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKAR 317
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
D + + ++++C H+ N GL RM+ E
Sbjct: 318 ----DIITWNTIIASCVHSEDCNLGLRMISRMRTE 348
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 322/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ ++ C +L E K++H LK+G F SNL S G+M AC +F ++
Sbjct: 46 SAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM--YSKCGAMFDACKVFEEMP 103
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ K EFEEAL + +M + V D + AC L+A K G
Sbjct: 104 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 163
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK-QMDQKSVASWSAIIAAHASNG 211
+H V K+GFE D+FV N+L +MY K +E AS +F + ++V S++ +I +
Sbjct: 164 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 223
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ L +F E+ + P E S++ AC + AL+ G H +++ + V
Sbjct: 224 QIEKGLSVFVELRRQGI-EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 282
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ L+DMY KCG LE+ + F + D ++ ++ ++S HG GK+A+ IF M+ G++
Sbjct: 283 SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVK 342
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + ++ +L+ CSHAGLV EGL F M Y +VP +HY CV+DL+GRAG L EA E
Sbjct: 343 PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 402
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I MP + N W S L A ++H + E+G++AA+ L ++ + VLLSN+YA ++
Sbjct: 403 FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQ 462
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R M + + PG+S V+V K + F ++D SHP IYE + + Q+K
Sbjct: 463 WEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKA 522
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P V D+D+ K + L HS+++A+AFALI + G PI + +NLR+C DCH+
Sbjct: 523 AGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSA 582
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + R+IIVRD RFH F DG+CSC DYW
Sbjct: 583 IKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 616
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 167/319 (52%), Gaps = 6/319 (1%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ +I G + +F EA+ + M G P F F + +ACA L +++ G Q+H
Sbjct: 9 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 68
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K G +LFV ++L +MY KC + A +F++M K SW+A+I ++ G + E L
Sbjct: 69 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 128
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F +M +E+ ++ +L S L AC L A G+ H S+++ ++ V +L DMY
Sbjct: 129 AFKKMIDEEV-TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMY 187
Query: 279 VKCGCLEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
K G +E +F + ++ + ++Y+ +I G Q ++ LS+F E+ R+G+EP++ +
Sbjct: 188 SKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF 247
Query: 338 VGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ AC++ + +G L MK+ + P V +VD+ G+ G+L +A++ +
Sbjct: 248 SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAFDEI 305
Query: 397 PIQQNDVVWRSLLSASKVH 415
++ W SL+S H
Sbjct: 306 G-DPTEIAWNSLVSVFGQH 323
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/574 (36%), Positives = 328/574 (57%), Gaps = 12/574 (2%)
Query: 38 LKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM-DYACSIFRQIDE 93
LK+C L + H + K G + PF + L++ + GS+ D A +F +
Sbjct: 47 LKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLIS---MYCKGSLVDNARKVFEENFH 103
Query: 94 PGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N L+ G+V + +A+ L+ +M E GV ++ T L AC L+ G
Sbjct: 104 SRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGS 163
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H K GF+ D+ V N I MY KC V +A +F +M K + SW+A+++ +A NG
Sbjct: 164 SLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNG 223
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + L+L+ M+ P+ LV VLS+C +LGA +G + + N +
Sbjct: 224 LATNVLELYRNMDMNGV-HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLN 282
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI+MY +CG L K +F M ++ ++++ +I G MHG G+ A+ +F EM+R G+E
Sbjct: 283 NALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIE 342
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD +V VLSACSHAGL ++GL F MK Y++ P +HY C+VDL+GRAG L EA
Sbjct: 343 PDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQT 402
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI+SMPI+ + VW +LL A K+H N+E+ E+A + + ++ + YVLLSN+Y+ A
Sbjct: 403 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANN 462
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
V +IR M K L + PG S VE+ +V+ F+ DR+H D IY ++ ++E +
Sbjct: 463 SKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQ 522
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
E P+ R+ + R+ HS+KLA+AF L++ + G+ + I +NLR+C DCH +
Sbjct: 523 EFGKPEKDN--REESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLF 580
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K++S I R++ VRD RFH F++G+CSC+DYW
Sbjct: 581 FKMVSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 614
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 170/332 (51%), Gaps = 12/332 (3%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+NT +R K +F +AL LY +M G P+ FTFP K+CA L G Q HG +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSEC 216
KVG + FVQ LI+MY K V+ A +F++ +K ++A+++ + SN S+
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 217 LKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ LF +MN E P S+ L+ ++ AC L+LG H S ++ +V V I
Sbjct: 128 VLLFRQMNEEGV--PVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY+KCG + LF M K ++++ M+SG A +G L ++ M G+ PD V
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
VGVLS+C++ G + G +M+ + P + + ++++ R G L +A +
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKAQAVFD 303
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
MP ++ V W +++ +H + GEIA +
Sbjct: 304 GMP-ERTLVSWTAIIGGYGMHGH---GEIAVQ 331
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/560 (38%), Positives = 317/560 (56%), Gaps = 5/560 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VHA +K G + F + A S G + A +F ++ E +N + V
Sbjct: 128 KQVHALAVKAGQISDVFVGCS--AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
E +++AL + E G EP+ TF A ACA L+ G Q+HG V + GFE D+
Sbjct: 186 LEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVS 245
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N LI+ YGKC +V + IF + + + SW ++I ++ N + +F E
Sbjct: 246 VANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEG 305
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P + ++ SVLSAC L L++GK H ++ N+ V ++L+DMY KCG +E
Sbjct: 306 I-EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 364
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML--REGLEPDDVVYVGVLSACS 345
F M ++ +T++ MI G A GQ A+++F EM + P+ V +V VLSACS
Sbjct: 365 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 424
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
AG VN G+ F+ M+ Y I P +HY CVVDL+GRAGM+ +A + I+ MPI+ VW
Sbjct: 425 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 484
Query: 406 RSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASK 465
+LL ASK+ E+G++AA NLF+++ ++VLLSNM+A A RW + +R EM
Sbjct: 485 GALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDV 544
Query: 466 GLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDV 525
G+ + G S + V+ F ++D SH I M+ ++ +++ GY PD S L D+
Sbjct: 545 GIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDL 604
Query: 526 DEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
+E+EK + HS+K+A+AF LI + G PIRI +NLR+C DCH+ K IS I REIIV
Sbjct: 605 EEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIV 664
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RD FHRF+D CSCRDYW
Sbjct: 665 RDNNLFHRFRDNQCSCRDYW 684
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 156/316 (49%), Gaps = 9/316 (2%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ LI G V+ F ALF ++ M ++P++FTFP FKA L++ G Q+H
Sbjct: 76 WTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAV 135
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K G D+FV S +MY K E A +F +M ++++A+W+A ++ G + + L
Sbjct: 136 KAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALT 195
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F E +E W P + L+AC L LG+ HG ++++ +V V LID Y
Sbjct: 196 AFIEFRHEG-WEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFY 254
Query: 279 VKC---GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
KC GC E +F ++ +++ MI + + ++A +F +EG+EP D
Sbjct: 255 GKCHQVGCSE---IIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDF 311
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+ VLSAC+ ++ G + ++ +V + +VD+ G+ G + +A
Sbjct: 312 MVSSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDE 370
Query: 396 MPIQQNDVVWRSLLSA 411
MP ++N V W +++
Sbjct: 371 MP-ERNLVTWNAMIGG 385
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 123/278 (44%), Gaps = 4/278 (1%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
+ +L ++ Q + G H + K + F+ N L+NMY K ++ A +
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+SV +W+A+IA NG ++ L F M + +P + A L + +
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI-QPNDFTFPCAFKASGSLRSPLV 126
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK H ++ +V V S DMY K G E+ +F M ++ T++ +S +
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
G+ +AL+ F E EG EP+ + + L+AC+ A + G L+ V
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQ-LHGFVLQSGFEADVS 245
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++D G+ +G + E+I S + NDV W S++
Sbjct: 246 VANGLIDFYGKCHQVGCS-EIIFSGISKPNDVSWCSMI 282
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/565 (37%), Positives = 313/565 (55%), Gaps = 36/565 (6%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTF 134
+H G MD A S+F ++E +N +I G+ + + AL ++ M +EPD FT
Sbjct: 240 THQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTV 299
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI------ 188
++ ACA L+ LK G Q+H ++ + G + N+LI+ Y K VE A I
Sbjct: 300 TSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVV 359
Query: 189 ---------------------------FKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F M+ + V +W+A+I + NG E ++LF
Sbjct: 360 ADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFR 419
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M P L +VLSAC L L GK H IR++ +V V ++I +Y +
Sbjct: 420 SMIRSGP-EPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARS 478
Query: 282 GCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
G + +F + K +T++ MI LA HG G++A+ +F EMLR G++PD V Y+GV
Sbjct: 479 GSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGV 538
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
SAC+HAG +++G +++M E+ IVP + HY C+VDL+ RAG+L EA E IQ MP+
Sbjct: 539 FSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAP 598
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
+ VVW SLL+A +V N ++ E+AA+ L I+ + Y L+N+Y+ RW D A+I
Sbjct: 599 DTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWK 658
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
K + + GFS V KV+ F + D HP D I + +M ++K G+ PD++
Sbjct: 659 LRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNS 718
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL DVD++ K E L HS+KLAIAF LI + + +RI +NLR+CNDCHT K IS + +
Sbjct: 719 VLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNLRVCNDCHTAIKFISKVVD 778
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH F+DG CSC+DYW
Sbjct: 779 REIIVRDATRFHHFRDGYCSCKDYW 803
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 185/420 (44%), Gaps = 71/420 (16%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
N F ++L++ A S G + A +F Q+ E A + ++ G + F +A+ + +
Sbjct: 96 NAFTWNSLLSMYAKS--GRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLD 153
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G+ P F + +CA +A G ++H V K+G + V NS++ MYGKC
Sbjct: 154 MVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGD 213
Query: 182 VEFASAIFKQM-------------------------------DQKSVASWSAIIAAHASN 210
E A A+F++M +++S+ SW+AIIA + N
Sbjct: 214 AETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQN 273
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-------- 262
GL LK F M P+E + SVLSAC +L L +GK H ++R
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQI 333
Query: 263 -------------------------ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
++ LNVI T+L++ YVK G ++ +F +M ++
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LL 355
+ ++ MI G +GQ EA+ +F M+R G EP+ VLSAC+ + G +
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIH 453
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
C L+ + +V ++ + R+G + A + + ++ V W S++ A H
Sbjct: 454 CRAIRSLQEQ---SVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQH 510
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/577 (38%), Positives = 335/577 (58%), Gaps = 13/577 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++L++C ++L +++H +L G + A+ LV A C L + +A +F
Sbjct: 67 SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGL-----VGHARRLFD 121
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ + F +N LIR + ++ E A+ LY M + GVEPDNFT+P KACA L L+
Sbjct: 122 GMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLET 181
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G ++H V + D+FV L++MY KC V+ A A+F ++ + W+++IAA+
Sbjct: 182 GREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQ 241
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NG E L L +M P + LVS +SA AL G+ HG R
Sbjct: 242 NGRPMEALSLCRDMAANGVG-PTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
++TSL+DMY K G ++ LF + + ++++ MI G MHG EAL +F++M E
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEA 360
Query: 330 -LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+ PD++ +VGVLSAC+H G+V E F M Y I PTVQH+ C+VD++G AG E
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEE 420
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A +LI+ MP+Q + +W +LL+ K+H N+E+GE+A + L ++ +YVLLSN+YA+
Sbjct: 421 AYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQ 480
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
+ +W A++R M ++GL + G S +E+ K + F+ D SHP IYE + ++E
Sbjct: 481 SGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGL 540
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+ GY PD V DV +DEKR ++ HS++LAIAF LI G+ + + +NLR+C DC
Sbjct: 541 MSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDC 600
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H KLIS I +REII+RD R+H F +G CSC+DYW
Sbjct: 601 HVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ ++ ++C ++L G Q+HG + G D + L+++Y C V A +F M
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+++V W+ +I A+A +G ++L+ M + P+ L AC L L+ G+
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGV-EPDNFTYPLALKACAALLDLETGR 183
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H ++ ++ V L+DMY KCGC++ +F + + + ++ MI+ +G
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ EALS+ +M G+ P V +S
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTIS 272
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 329/574 (57%), Gaps = 10/574 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+T KNLE+ +KVHAH+ F + F ++L+ C GS+ A +F ++
Sbjct: 58 ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKC-----GSVLEARKVFDEM 112
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +LI G+ + EEA+ L M + +P+ FTF +L KA G
Sbjct: 113 RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGR 172
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH K + D++V ++L++MY +C ++ A+A+F ++D K+ SW+A+I+ A G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKG 232
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L F EM + SV S+ LGAL+ GK H +I++ +
Sbjct: 233 DGETALMTFAEMLRNG-FEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAG 291
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+DMY K G + +F + DK +T++ M++ A +G GKEA+S F EM + G+
Sbjct: 292 NTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIY 351
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+ V ++ +L+ACSH GLV EG F+ MK EY + P + H+ VV L+GRAG+L AL
Sbjct: 352 LNQVTFLCILTACSHGGLVKEGKRYFEMMK-EYDLEPEIDHFVTVVALLGRAGLLNFALV 410
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I MPI+ VW +LL+A ++H N ++G+ AA ++F+++ VLL N+YA +
Sbjct: 411 FIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQ 470
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W A++R M + G+ + P S VE+ V+ FV+ D +HP + IY+M Q+ +++
Sbjct: 471 WDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRK 530
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
EGY PD+ VL VD+ E+ L+ HS+KLA+AFALI + G+ IRI +N+R+C DCH+
Sbjct: 531 EGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSA 590
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS ++ REI+VRD RFH F +G+CSC DYW
Sbjct: 591 FKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 3/285 (1%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+ P + ACA+ + L++ ++H H+ F D F+ NSLI++Y KC V A
Sbjct: 47 LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M +K + SW+++IA +A N + E + L M + ++P S+L A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGR-FKPNGFTFASLLKAAGAH 165
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+G+ H ++ +V V ++L+DMY +CG ++ +F + K ++++ +I
Sbjct: 166 ADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALI 225
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
SG A G G+ AL F+EMLR G E Y V S+ + G + +G M ++ R
Sbjct: 226 SGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHM-IKSRQ 284
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
T ++D+ ++G + +A ++ + ++ V W ++L+A
Sbjct: 285 KMTAFAGNTLLDMYAKSGSMIDARKVFDRVD-DKDLVTWNTMLTA 328
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/574 (36%), Positives = 322/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ ++ C +L E K++H LK+G F SNL S G+M AC +F ++
Sbjct: 111 SAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM--YSKCGAMFDACKVFEEMP 168
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ K EFEEAL + +M + V D + AC L+A K G
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 228
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK-QMDQKSVASWSAIIAAHASNG 211
+H V K+GFE D+FV N+L +MY K +E AS +F + ++V S++ +I +
Sbjct: 229 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 288
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ L +F E+ + P E S++ AC + AL+ G H +++ + V
Sbjct: 289 QIEKGLSVFVELRRQGI-EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ L+DMY KCG LE+ + F + D ++ ++ ++S HG GK+A+ IF M+ G++
Sbjct: 348 SILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVK 407
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + ++ +L+ CSHAGLV EGL F M Y +VP +HY CV+DL+GRAG L EA E
Sbjct: 408 PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 467
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I MP + N W S L A ++H + E+G++AA+ L ++ + VLLSN+YA ++
Sbjct: 468 FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQ 527
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R M + + PG+S V+V K + F ++D SHP IYE + + Q+K
Sbjct: 528 WEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKA 587
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P V D+D+ K + L HS+++A+AFALI + G PI + +NLR+C DCH+
Sbjct: 588 AGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSA 647
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + R+IIVRD RFH F DG+CSC DYW
Sbjct: 648 IKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 196/382 (51%), Gaps = 9/382 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T KT K L K++HA ++ G+ F ++LV S G +D+A +F + +
Sbjct: 14 TYAKT-KRLRRGKQLHALLICAGYTPCTFLTNHLVNM--YSKCGELDHALKLFDTMPQRN 70
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +I G + +F EA+ + M G P F F + +ACA L +++ G Q+H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
K G +LFV ++L +MY KC + A +F++M K SW+A+I ++ G + E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L F +M +E+ ++ +L S L AC L A G+ H S+++ ++ V +L
Sbjct: 191 ALLAFKKMIDEEV-TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 249
Query: 276 DMYVKCGCLEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
DMY K G +E +F + ++ + ++Y+ +I G Q ++ LS+F E+ R+G+EP++
Sbjct: 250 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 309
Query: 335 VVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++ AC++ + +G L MK+ + P V +VD+ G+ G+L +A++
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAF 367
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
+ ++ W SL+S H
Sbjct: 368 DEIG-DPTEIAWNSLVSVFGQH 388
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/547 (38%), Positives = 326/547 (59%), Gaps = 9/547 (1%)
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV---KEVEFEEALFLYNEMF 123
S L A S G ++YA + ++ +NT+IR + +AL L+ M
Sbjct: 21 SKLFTFAAQSPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFML 80
Query: 124 ERGV---EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
+ +PD FT+ K+C +L+ ++ Q+HG + K+GF DL++QN+LI+MY +
Sbjct: 81 QPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIG 140
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
++ A +F +M + V SW+++IA ++ L E ++LF M E E+ ++SVL
Sbjct: 141 ELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRML-EVGVDVNEATVISVL 199
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
C GAL +G+ HG + V T+LI MY KCGCLE +F + D+
Sbjct: 200 RGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVF 259
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
++ MI GLA HG KEA+ +F EM ++PD+ + VLSA +AGLV EG + F+ +
Sbjct: 260 VWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDV 319
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ Y + P ++H+GC+VDL+ + G L EA + I +MP++ + V+WR+L+ A KVH + E
Sbjct: 320 QKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTER 379
Query: 421 GEIAAKNL--FQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
E K+L +++H Y+L SN+YA +W D A++R M KGL + PG S +EV
Sbjct: 380 AERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEV 439
Query: 479 ARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHS 538
V++FV D HP + I+ + QM +L+ EGY+P +S+V+ ++D++EK +L HS
Sbjct: 440 DGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRKEGYNPKVSEVMLEMDDEEKAIQLLHHS 499
Query: 539 QKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+KLA+A+ LI GS IRI +NLR C DCH + KLIS +Y+R+IIVRDR RFH FK+G
Sbjct: 500 EKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMKLISKVYQRDIIVRDRIRFHHFKNGD 559
Query: 599 CSCRDYW 605
CSC+DYW
Sbjct: 560 CSCKDYW 566
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 335/576 (58%), Gaps = 33/576 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT+ +N + +++HAH+++ N + LV S G ++YA IF ++ E
Sbjct: 285 LTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHM--YSECGRLNYAKEIFNRMAER 342
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A+ +N++I G+ + E +EAL L+ +M G++PD F+ ++ +C L ++G ++H
Sbjct: 343 NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELH 402
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK--SVASWSAIIAAHASNGL 212
+ + E + +Q L++MY KC +++A ++ Q +K + A W++I+A +A+ GL
Sbjct: 403 NFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGL 462
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E F EM E I VL+ T + L ++ET
Sbjct: 463 KKESFNHFLEM-------LESDIEYDVLTMVTIVNLL-------------------VLET 496
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG + K +F M K ++++ MISG + HG KEAL ++ EM ++G+ P
Sbjct: 497 ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYP 556
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
++V ++ +LSACSH GLV EGL F M+ +Y I +HY C+VDL+GRAG L +A E
Sbjct: 557 NEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEF 616
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
++ MPI+ W +LL A +VH ++++G +AA+ LF+++ +P YV++SN+YA A RW
Sbjct: 617 VEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRW 676
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+V IR M KG+ + PG S +E+ ++ F + ++HP + IY + + Q K
Sbjct: 677 KEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGL 736
Query: 513 GYSPDIS---QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
GY PD S Q ++D+ E+E+ E L HS++LA++ LI L + S IR+ +NLR+C DCH
Sbjct: 737 GYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCH 796
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T TK IS I R II RD RFH F++G CSC DYW
Sbjct: 797 TATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 203/388 (52%), Gaps = 19/388 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD---YACSIFR 89
++++ C + F K +H ++ G+ + + + ++ A S G +D YA +F
Sbjct: 76 SLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS--GCLDDLCYARKLFE 133
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ E +NT+I + + ++ EA +++ M + GV PDNFTF + + C L++
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDG 193
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H + GF+ D FV N+LI+MY KC+ E +F +M +++ +W++II+A A
Sbjct: 194 GKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 253
Query: 210 NGLWSECLKLFGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G +++ L LF M +E +P++ ++L+ C + + G+ H LIR N+
Sbjct: 254 FGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 313
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
IVET L+ MY +CG L +F MA++ +++ MI G +G+ +EAL +F +M
Sbjct: 314 IVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLN 373
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG----CVVDLMGRAG 384
G++PD +LS+C +G R + + T++ G +VD+ + G
Sbjct: 374 GIKPDCFSLSSMLSSCVSLSDSQKG-----RELHNFIVRNTMEEEGILQVVLVDMYAKCG 428
Query: 385 MLGEALELI-QSMPIQQNDVVWRSLLSA 411
+ A ++ Q++ +N +W S+L+
Sbjct: 429 SMDYAWKVYDQTIKKDRNTALWNSILAG 456
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/638 (34%), Positives = 364/638 (57%), Gaps = 49/638 (7%)
Query: 3 RTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWN 62
+T LH++++ T+P +L+ +++ CK++ + K+ HA+++
Sbjct: 160 QTQNLHKNMINTKPFHYVNHSKLS---------SLIDLCKSINQIKQTHANLITTAQITL 210
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF-VKEVEFEEALFLYNE 121
P A+ + AL+ S+ YA +F QI +P F +NT+I+ + + +++ ++
Sbjct: 211 PVIANKFLKNVALA---SLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRS 267
Query: 122 MF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
+ + G P+ ++F F AC ++EG Q+ H KVG + ++FV N+LI M+GK
Sbjct: 268 LIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWG 327
Query: 181 KVE-----FASAI--------------------------FKQMDQKSVASWSAIIAAHAS 209
+VE F SA+ F +M ++ V SWS IIA +
Sbjct: 328 RVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQ 387
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G + E L F +M + +P E +VS L+AC++L ALD GK H + R+ +N
Sbjct: 388 VGCFMEALDFFHKMLQSEV-KPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDR 446
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ SLIDMY KCG ++ +F K ++ ++ MI G AMHG+ +EA+++F +M E
Sbjct: 447 LLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVE 506
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+ P+ V ++ +L+ACSH +V EG F+ M +Y I P ++HYGC+VDL+ R+G L +
Sbjct: 507 KVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKD 566
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
+ E+I SMP+ + +W +LL+A +++ ++E G + + +I+ +H VLL N+Y+
Sbjct: 567 SEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYST 626
Query: 449 AQRWYDVAKIRTEM-ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+ RW + +R + + + PGFS +E+ ++F+ DRSHP IY + +M
Sbjct: 627 SGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMIS 686
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+LK GY P++ +VL D D++E +E L HS+KLAIAF L++ + G+PIRI +NLR+C
Sbjct: 687 KLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRIVKNLRVCG 746
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
DCH TK IS +Y+R IIVRDR R+H FKDG CSC+DY
Sbjct: 747 DCHQATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 784
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 318/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILKTC +LE +++H+ ++K F N + S L+ A G +D A I +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA--KLGKLDTAWDILIRFA 552
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ T+I G+ + ++AL + +M +RG+ D ACA LQALKEG Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH GF DL QN+L+ +Y +C K+E + F+Q + +W+A+++ +G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L++F MN E S + A + + GK H + + V
Sbjct: 673 NEEALRVFVRMNREGI-DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI MY KCG + F ++ K +++++ +I+ + HG G EAL F +M+ + P
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V VGVLSACSH GLV++G+ F+ M EY + P +HY CVVD++ RAG+L A E
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ MPI+ + +VWR+LLSA VH N+EIGE AA +L ++ + YVLLSN+YA +++W
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 911
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
R +M KG+ + PG S +EV ++ F D++HP D I+E + +
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY D +L ++ ++K + HS+KLAI+F L+ L PI + +NLR+CNDCH +
Sbjct: 972 GYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWI 1031
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S + REIIVRD RFH F+ G CSC+DYW
Sbjct: 1032 KFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L CK +E + ++H VLK GF + + + LV+ H G++ A IF +
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGNLISAEHIFSNMS 350
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ A +NTLI G + E+A+ L+ M G+EPD+ T +L AC+ L G Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+GF + ++ +L+N+Y KC +E A F + + ++V W+ ++ A+
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++F +M E+ P + S+L C LG L+LG+ H +I+ LN V +
Sbjct: 471 LRNSFRIFRQMQIEEI-VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ + A K ++++ MI+G + +AL+ F +ML G+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 333 DDVVYVGVLSACSHAGLVNEG 353
D+V +SAC+ + EG
Sbjct: 590 DEVGLTNAVSACAGLQALKEG 610
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 8/376 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
LKT +L+E +K+H+ +LK G N + L G + A +F ++ E F
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMPERTIF 152
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGMQIHGH 156
+N +I+ E L+ M V P+ TF + +AC A QIH
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ G V N LI++Y + V+ A +F + K +SW A+I+ + N +E
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++LF +M P SVLSAC + +L++G+ HG +++ + + V +L+
Sbjct: 273 IRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y G L +F M+ + +TY+ +I+GL+ G G++A+ +F M +GLEPD
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 337 YVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++ ACS G + G L KL + ++ G +++L + + AL+
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLE 449
Query: 396 MPIQQNDVVWRSLLSA 411
+ +N V+W +L A
Sbjct: 450 TEV-ENVVLWNVMLVA 464
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 183/392 (46%), Gaps = 20/392 (5%)
Query: 37 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+L+ C+ + +++HA +L G + + L+ S G +D A +F +
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL--YSRNGFVDLARRVFDGLR 249
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G K EA+ L+ +M+ G+ P + F ++ AC K+++L+ G Q
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG V K+GF D +V N+L+++Y + A IF M Q+ +++ +I + G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ ++LF M+ + P+ + L S++ AC+ G L G+ H + A N +E
Sbjct: 370 GEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+++Y KC +E L F + + ++VM+ + + + IF +M E + P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--VVDLMGRAGMLG 387
+ Y +L C G + G ++ +I+ T + Y C ++D+ + G L
Sbjct: 489 NQYTYPSILKTCIRLGDLELG------EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A +++ + DVV + + A +N +
Sbjct: 543 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFD 572
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 18/251 (7%)
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +S I ++G K++ +F + AS++AI + + + E K + N +
Sbjct: 23 VSSSFIFIHGVPRKLK-TRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVEN-R 78
Query: 228 CWRPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
RP L +L C G+LD G+ H +++ N + L D Y+ G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M ++ T++ MI LA E +F M+ E + P++ + GVL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 196
Query: 347 AGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVV-----DLMGRAGMLGEALELIQSMPIQQ 400
G + FD + ++ RI+ VV DL R G + A + + ++
Sbjct: 197 ----RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 401 NDVVWRSLLSA 411
+ W +++S
Sbjct: 253 HS-SWVAMISG 262
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/571 (38%), Positives = 320/571 (56%), Gaps = 19/571 (3%)
Query: 45 EEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGS------MDYACSIFRQIDEPGAF 97
F ++HAH+L+ G +P + + A + S +D+ + + P F
Sbjct: 34 RRFLQLHAHLLRTGLLALSPVTTTAAFLSLAAASLPSHRALAVLDHHLTAASSL--PSTF 91
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA-CAKLQALKEGMQIHGH 156
N+++R + +AL M G + FT L K CA L Q+H +
Sbjct: 92 QCNSILRVLS---DPSDALRFLRRMRALGRRGNAFTLAILLKPRCA----LAHARQLHAN 144
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V G D + SL+ Y + A +F +M + +W+ +I+ A N +
Sbjct: 145 VVAEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNRRTKDA 204
Query: 217 LKLFGEMNN-EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
LKLF EM + P++ + +L ACT LGALD G+ + + V SLI
Sbjct: 205 LKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKVRNSLI 264
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY +CGC++K +F K +T+S MISGLA +G G +A+S F EM+R + PD+
Sbjct: 265 AMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVAPDEQ 324
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+ GVLSACSH+GLV+EG FD M+ EY + P V+HYGC+VDLMGRAG+L EA EL+ +
Sbjct: 325 TFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYELVTN 384
Query: 396 -MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
M + + +WR+LL A ++H ++++GE NL ++ + DYVLL N YA W
Sbjct: 385 EMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVGEWSK 444
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V+++R M KG+ +PG + VE +VY+F++ D +HP IYE ++++ QL+ GY
Sbjct: 445 VSEVRKLMQEKGIQTTPGCTTVEHNGEVYEFIADDDAHPRKVEIYEKLNEINKQLRIAGY 504
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P++S L D+D + K L HS+KLAIAFAL+ Q PIR+A+NLR+C DCH +TK+
Sbjct: 505 VPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQNRPIRLAKNLRVCVDCHNFTKV 564
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S IY R +IVRDR RFH F+ G CSC DYW
Sbjct: 565 FSGIYNRLVIVRDRTRFHHFQGGKCSCNDYW 595
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 311/554 (56%), Gaps = 27/554 (4%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A IF +++E ++ +I + + +AL L+ M G+ PD T +L
Sbjct: 308 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 367
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC + L + Q+H G +L V N L++ Y ++ A +F M +
Sbjct: 368 YACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSV 427
Query: 199 SWSAIIAAHASNGLWSECLKLFGEM---------------------------NNEKCWRP 231
SWS ++ A G + C F E+ E+ P
Sbjct: 428 SWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVP 487
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
++ +V+V+ AC LGA+ + + R L+VI+ T++IDM+ KCGC+E +F
Sbjct: 488 DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 547
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M +K +++S MI+ HGQG++AL +F MLR G+ P+ + V +L ACSHAGLV
Sbjct: 548 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 607
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EGL F M +Y + V+HY CVVDL+GRAG L EAL+LI+SM +++++ +W + L A
Sbjct: 608 EGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
+ H ++ + E AA +L ++ +P Y+LLSN+YA A RW DVAK R M+ + L + P
Sbjct: 668 CRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIP 727
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G++ +EV K ++F D +HP IYEM+ + +L+ GY PD + VL DVDE+ K
Sbjct: 728 GWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKI 787
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
L HS+KLAIAF LI + +PIRI +NLR+C DCHT+ KL+S I R IIVRD RF
Sbjct: 788 GILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRF 847
Query: 592 HRFKDGTCSCRDYW 605
H FK+G CSC DYW
Sbjct: 848 HHFKEGACSCGDYW 861
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 170/344 (49%), Gaps = 24/344 (6%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFF 60
+ T SL L EE RL + ++ L C+NL + ++VHA G
Sbjct: 51 IIETQFRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGML 110
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
N A+ L+ S++ ++D A +F + + ++ ++ GF K ++ +
Sbjct: 111 ENIVVANKLIYF--YSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFR 168
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
E+ G PDN+T P + +AC L+ L Q +L++MY KC
Sbjct: 169 ELIRCGARPDNYTLPFVIRACRDLKNL---------------------QMALVDMYVKCR 207
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
++E A +F +M ++ + +W+ +I +A G +E L LF +M E P++ +V+V+
Sbjct: 208 EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGV-VPDKVAMVTVV 266
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
AC LGA+ + + R L+VI+ T++IDMY KCGC+E +F M +K +
Sbjct: 267 FACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVI 326
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++S MI+ HGQG++AL +F ML G+ PD + +L AC
Sbjct: 327 SWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 32/285 (11%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
C+NL + ++VHA G N A+ LV S++ ++D A +F + + +
Sbjct: 372 NCRNLTQVRQVHAQASVHGMLQNLIVANKLVHF--YSYYRALDDAYGLFDGMCVRDSVSW 429
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP---------ALFK----------- 139
+ ++ GF K ++ + E+ G PDN+T P LF
Sbjct: 430 SVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDK 489
Query: 140 --------ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
ACAKL A+ + I ++ + F+ D+ + ++I+M+ KC VE A IF +
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
M++K+V SWSA+IAA+ +G + L LF M P + LVS+L AC+H G ++
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL-PNKITLVSLLYACSHAGLVEE 608
Query: 252 GKCTHGSLIRNISA-LNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
G + + S +V T ++D+ + G L++ L L M
Sbjct: 609 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 653
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 184/431 (42%), Gaps = 66/431 (15%)
Query: 107 VKEVEFEE-ALFLYNEMFERGVEPDNFTF-----PALF-KACAKLQALKEGMQIHGHVFK 159
+ E +F + +L L+N R E F F P + A + L + Q+H
Sbjct: 51 IIETQFRQTSLNLHN----REEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASV 106
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
G ++ V N LI Y ++ A +F M + SWS ++ A G + C
Sbjct: 107 HGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGT 166
Query: 220 FGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F E+ +C RP+ L V+ AC L L + +L+DMY
Sbjct: 167 FRELI--RCGARPDNYTLPFVIRACRDLKNLQM---------------------ALVDMY 203
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
VKC +E LF M ++ +T++VMI G A G+ E+L +F +M EG+ PD V V
Sbjct: 204 VKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 263
Query: 339 GVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
V+ AC+ G +++ + D R K + ++ ++D+ + G + A E+
Sbjct: 264 TVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT----AMIDMYAKCGCVESAREIFDR 319
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI---NSHHPSDYVLLSNMYA--RAQ 450
M ++N + W ++++A H A +LF++ + P L S +YA +
Sbjct: 320 ME-EKNVISWSAMIAAYGYHGQGR----KALDLFRMMLSSGMLPDKITLASLLYACINCR 374
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM----- 505
V ++ + + G+ Q+ + VA K+ F S R A D+ Y + M
Sbjct: 375 NLTQVRQVHAQASVHGMLQN-----LIVANKLVHFYSYYR---ALDDAYGLFDGMCVRDS 426
Query: 506 -EWQLKFEGYS 515
W + G++
Sbjct: 427 VSWSVMVGGFA 437
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 318/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILKTC +LE +++H+ ++K F N + S L+ A G +D A I +
Sbjct: 455 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA--KLGKLDTAWDILIRFA 512
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ T+I G+ + ++AL + +M +RG+ D ACA LQALKEG Q
Sbjct: 513 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 572
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH GF DL QN+L+ +Y +C K+E + F+Q + +W+A+++ +G
Sbjct: 573 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 632
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L++F MN E S + A + + GK H + + V
Sbjct: 633 NEEALRVFVRMNREGI-DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 691
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI MY KCG + F ++ K +++++ +I+ + HG G EAL F +M+ + P
Sbjct: 692 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 751
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V VGVLSACSH GLV++G+ F+ M EY + P +HY CVVD++ RAG+L A E
Sbjct: 752 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 811
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ MPI+ + +VWR+LLSA VH N+EIGE AA +L ++ + YVLLSN+YA +++W
Sbjct: 812 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 871
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
R +M KG+ + PG S +EV ++ F D++HP D I+E + +
Sbjct: 872 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 931
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY D +L ++ ++K + HS+KLAI+F L+ L PI + +NLR+CNDCH +
Sbjct: 932 GYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWI 991
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S + REIIVRD RFH F+ G CSC+DYW
Sbjct: 992 KFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L CK +E + ++H VLK GF + + + LV+ H G++ A IF +
Sbjct: 253 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGNLISAEHIFSNMS 310
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ A +NTLI G + E+A+ L+ M G+EPD+ T +L AC+ L G Q
Sbjct: 311 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 370
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+GF + ++ +L+N+Y KC +E A F + + ++V W+ ++ A+
Sbjct: 371 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 430
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++F +M E+ P + S+L C LG L+LG+ H +I+ LN V +
Sbjct: 431 LRNSFRIFRQMQIEEI-VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 489
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ + A K ++++ MI+G + +AL+ F +ML G+
Sbjct: 490 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 549
Query: 333 DDVVYVGVLSACSHAGLVNEG 353
D+V +SAC+ + EG
Sbjct: 550 DEVGLTNAVSACAGLQALKEG 570
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 8/376 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
LKT +L+E +K+H+ +LK G N + L G + A +F ++ E F
Sbjct: 55 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMPERTIF 112
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGMQIHGH 156
+N +I+ E L+ M V P+ TF + +AC A QIH
Sbjct: 113 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 172
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ G V N LI++Y + V+ A +F + K +SW A+I+ + N +E
Sbjct: 173 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 232
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++LF +M P SVLSAC + +L++G+ HG +++ + + V +L+
Sbjct: 233 IRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 291
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y G L +F M+ + +TY+ +I+GL+ G G++A+ +F M +GLEPD
Sbjct: 292 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 351
Query: 337 YVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++ ACS G + G L KL + ++ G +++L + + AL+
Sbjct: 352 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLE 409
Query: 396 MPIQQNDVVWRSLLSA 411
+ +N V+W +L A
Sbjct: 410 TEV-ENVVLWNVMLVA 424
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 183/392 (46%), Gaps = 20/392 (5%)
Query: 37 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+L+ C+ + +++HA +L G + + L+ S G +D A +F +
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL--YSRNGFVDLARRVFDGLR 209
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G K EA+ L+ +M+ G+ P + F ++ AC K+++L+ G Q
Sbjct: 210 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 269
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG V K+GF D +V N+L+++Y + A IF M Q+ +++ +I + G
Sbjct: 270 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 329
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ ++LF M+ + P+ + L S++ AC+ G L G+ H + A N +E
Sbjct: 330 GEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 388
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+++Y KC +E L F + + ++VM+ + + + IF +M E + P
Sbjct: 389 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 448
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--VVDLMGRAGMLG 387
+ Y +L C G + G ++ +I+ T + Y C ++D+ + G L
Sbjct: 449 NQYTYPSILKTCIRLGDLELG------EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 502
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A +++ + DVV + + A +N +
Sbjct: 503 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFD 532
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 14/189 (7%)
Query: 230 RPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
RP L +L C G+LD G+ H +++ N + L D Y+ G L
Sbjct: 41 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 100
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M ++ T++ MI LA E +F M+ E + P++ + GVL AC
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC---- 156
Query: 349 LVNEGLLCFDRM-KLEYRIVPTVQHYGCVV-----DLMGRAGMLGEALELIQSMPIQQND 402
G + FD + ++ RI+ VV DL R G + A + + ++ +
Sbjct: 157 --RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 214
Query: 403 VVWRSLLSA 411
W +++S
Sbjct: 215 -SWVAMISG 222
>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 346/629 (55%), Gaps = 48/629 (7%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF-----FWN---- 62
LL + ++PP NL + + + LEE KKVH H+ GF WN
Sbjct: 78 LLGRAKKPPASTYCNL-------IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILG 130
Query: 63 ---------------------PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
C+ N++ + G ++ A ++F ++ E ++ +
Sbjct: 131 MYAKCGSLVDARKVFDEMPERDVCSWNVMVN-GYAEVGLLEEARNLFDEMPERDSYSWTA 189
Query: 102 LIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
++ G+VK+ + EEAL LY+ M +P+ FT + A A ++ ++ G +IHGH+ +
Sbjct: 190 MVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRA 249
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G + D + +SL++MYGKC ++ A IF ++ K V SW+++I + + W E LF
Sbjct: 250 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLF 309
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
E+ C RP E VL+AC L +LG+ HG + R +SLIDMY K
Sbjct: 310 SELIGS-CERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTK 368
Query: 281 CGCLEKGLCLFRMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
CG +E R + D C ++ + +I G A +G+ EAL F +L+ G +PD V
Sbjct: 369 CGNIESA----RHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVT 424
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V VLSAC+HAGLV +GL F + ++ + T HY C+VDL+ R+G + ++ M
Sbjct: 425 FVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEM 484
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P++ + +W S+L + N+++ E AA+ LF+I +P YV ++N+YA A +W +
Sbjct: 485 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 544
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
K+R M G+ + PG S E+ RK + F++ D SHP ++ I E + ++ ++K EGY P
Sbjct: 545 KMRKRMQEIGITKKPGSSWTEIKRKRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVP 604
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
S VL DV++++K E L HS+KLA+AFA++ +G+ I++ +NLR C DCH+ K IS
Sbjct: 605 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFIS 664
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +R+I +RD RFH F++G CSCRDYW
Sbjct: 665 KITKRKITIRDSTRFHCFENGQCSCRDYW 693
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 33/265 (12%)
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
++ R +P T+ L + C++ +AL+EG ++H H+ GF + + N ++ MY KC
Sbjct: 77 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCG 136
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW----------- 229
+ A +F +M ++ V SW+ ++ +A GL E LF EM +
Sbjct: 137 SLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVK 196
Query: 230 --RPEESILVSVL------------------SACTHLGALDLGKCTHGSLIRNISALNVI 269
+PEE++++ L +A + + GK HG ++R + +
Sbjct: 197 KDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEV 256
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ +SL+DMY KCGC+++ +F + DK ++++ MI + +E S+FSE++
Sbjct: 257 LWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSC 316
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGL 354
P++ + GVL+AC A L E L
Sbjct: 317 ERPNEYTFSGVLNAC--ADLTTEEL 339
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/592 (35%), Positives = 335/592 (56%), Gaps = 18/592 (3%)
Query: 22 GPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
GPE+ + +L C + L + ++VHAH++K + + + L L +
Sbjct: 47 GPEMGFHGYD----ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRL-----LIFY 97
Query: 79 GSMD---YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
G D A + ++ E + +I + + EAL ++ EM +P+ FTF
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ +C + L G QIHG + K ++ +FV +SL++MY K +++ A IF+ + ++
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V S +AIIA +A GL E L++F +++E P S+L+A + L LD GK
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H ++R +++ SLIDMY KCG L LF M ++ ++++ M+ G + HG G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHY 373
+E L +F M E ++PD V + VLS CSH + + GL FD M EY P +HY
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
GC+VD++GRAG + EA E I+ MP + V SLL A +VH +++IGE + L +I
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
+ +YV+LSN+YA A RW DV +R M K + + PG S ++ + ++ F + DR+HP
Sbjct: 457 ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 516
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
+ + + ++ ++K GY PD+S VL DVDE++K + L GHS+KLA+ F LI +G
Sbjct: 517 RREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEG 576
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+C DCH + K+ S ++ERE+ +RD+ RFH+ DG CSC DYW
Sbjct: 577 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 159/305 (52%), Gaps = 8/305 (2%)
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
+EAL EM G E + AL AC +AL++G ++H H+ K + +++
Sbjct: 36 LQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTR 92
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L+ YGKC+ +E A + +M +K+V SW+A+I+ ++ G SE L +F EM +P
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD-GKP 151
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
E +VL++C L LGK HG +++ ++ V +SL+DMY K G +++ +F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ ++ ++ + +I+G A G +EAL +F + EG+ P+ V Y +L+A S L++
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 352 EGLLCF-DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
G ++ E +Q+ ++D+ + G L A L +MP ++ + W ++L
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLV 328
Query: 411 ASKVH 415
H
Sbjct: 329 GYSKH 333
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 321/561 (57%), Gaps = 12/561 (2%)
Query: 23 PELNLRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
P+ NL K +LK C L E+ + VHAH++ F N N++ + G
Sbjct: 85 PDYNLYSK------LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNM-YAKCG 137
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+D A +F ++ + LI GF + +AL L+ +M G++P++FT +L K
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLK 197
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
A L G Q+H K G++ ++V ++L++MY +C ++ A F M KS S
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+A+I+ HA G L L +M K ++P SV SAC +GAL+ GK H +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQ-RKNFQPTHFTYSSVFSACASIGALEQGKWVHAHM 316
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I++ L + +L+DMY K G ++ +F + ++++ M++G A HG GKE L
Sbjct: 317 IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETL 376
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
F +MLR G+EP+++ ++ VL+ACSH+GL++EGL F+ MK +Y++ P V HY VDL
Sbjct: 377 DRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYKVEPDVPHYVTFVDL 435
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GR G+L A I+ MPI+ VW +LL A ++H N+E+G AA+ F+++ H
Sbjct: 436 LGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPR 495
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
+LLSN+YA A RW DVAK+R M G+ + P S VE+ V+ FV+ D +HP I
Sbjct: 496 MLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIR 555
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
++ ++K GY PD S VL VD+ E+ E+L+ HS+KLA+AFAL++ GSPIRI
Sbjct: 556 GKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIK 615
Query: 560 RNLRMCNDCHTYTKLISVIYE 580
+N+R+C DCH K +S IYE
Sbjct: 616 KNIRVCGDCHAAIKFVSKIYE 636
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/532 (40%), Positives = 315/532 (59%), Gaps = 32/532 (6%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
AC +F ++ E ++ LI F + +EEA+ + M + GV D + ACA
Sbjct: 194 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 253
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK---------------------- 181
L + G IH K+G E + +QN+LI MY KC
Sbjct: 254 LLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSM 313
Query: 182 ---------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
V+ A AIF M +K V SWS++I+ +A N L+ E L LF EM ++P+
Sbjct: 314 ISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSG-FKPD 372
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
E+ LVSV+SAC L AL+ GK H + RN +NVI+ T+LIDMY+KCGC+E L +F
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 432
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M +K T++ +I GLAM+G + +L +FS M + + P+++ ++GVL AC H GLV+E
Sbjct: 433 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 492
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G F M +++I P V+HYGC+VDL+GRAG L EA EL+ MP+ + W +LL A
Sbjct: 493 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 552
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
K H + E+G + L ++ H +VLLSN+YA +W DV +IR M + + PG
Sbjct: 553 KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 612
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S++E +++F++ D++HP D I +M+ +M +LK EGY+PDI++VL DVDE+EK
Sbjct: 613 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES 672
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
L HS+KLAIAF LI++S +PIRI +NLR+CNDCHT KLIS + R+I+
Sbjct: 673 TLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 183/445 (41%), Gaps = 96/445 (21%)
Query: 58 GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
GF + AS L+ + +DY IF I+ F +N +IR +++ A
Sbjct: 5 GFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFT 64
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
LY M + DN+T+P L +AC+ ++ E Q+H HV K+GF+ D++V+N+LIN +
Sbjct: 65 LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 124
Query: 178 KCE-------------------------------KVEFASAIFKQMDQKSV--------- 197
C VE A I+ QM ++S+
Sbjct: 125 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVL 184
Query: 198 ----------------------ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
+WSA+IA N ++ E ++ F M+ +E +
Sbjct: 185 FGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV-MVDEVV 243
Query: 236 LVSVLSACTHLGALDLGKCTHG-------------------------------SLIRNIS 264
VS LSAC +L +++GK H L
Sbjct: 244 AVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAY 303
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
L++I S+I Y+KC ++ +F M +K +++S MISG A + E L++F E
Sbjct: 304 LLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQE 363
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M G +PD+ V V+SAC+ + +G +K + + ++D+ + G
Sbjct: 364 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILG-TTLIDMYMKCG 422
Query: 385 MLGEALELIQSMPIQQNDVVWRSLL 409
+ ALE+ M I++ W +L+
Sbjct: 423 CVETALEVFYGM-IEKGISTWNALI 446
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 7/256 (2%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +IF + E ++++I G+ + F+E L L+ EM G +PD T ++ A
Sbjct: 323 VDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISA 382
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
CA+L AL++G +H ++ + G ++ + +LI+MY KC VE A +F M +K +++W
Sbjct: 383 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 442
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSL 259
+A+I A NGL L +F M +KC P E + VL AC H+G +D G+ S+
Sbjct: 443 NALILGLAMNGLVESSLDMFSNM--KKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSM 500
Query: 260 IRNISAL-NVIVETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKE 317
I + NV ++D+ + G L++ L RM T+ ++ HG +
Sbjct: 501 IHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEM 560
Query: 318 ALSIFSEMLREGLEPD 333
+ +++ L+PD
Sbjct: 561 GRRVGRKLIE--LQPD 574
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 31 EQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
E ++++ C L E+ K VHA++ + G N + L+ G ++ A +
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM--YMKCGCVETALEV 430
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + E G +N LI G E +L +++ M + V P+ TF + AC + +
Sbjct: 431 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 490
Query: 148 KEGMQ-----IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWS 201
EG IH H + ++ ++++ G+ K++ A + +M VA+W
Sbjct: 491 DEGQHHFYSMIHDH----KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWG 546
Query: 202 AIIAAHASNG 211
A++ A +G
Sbjct: 547 ALLGACKKHG 556
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 322/571 (56%), Gaps = 7/571 (1%)
Query: 38 LKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L C L + + V G+ + F S+L+ A WG+M A +F ++
Sbjct: 115 LSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYA--RWGAMGDAVKVFDRMPRR 172
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++T++ GFV + +A+ +Y M E GV+ D + +AC + ++ G +H
Sbjct: 173 DRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAARNVRMGASVH 232
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
GH+ + G D+ SL++MY K ++ A +F M ++ SWSA+I+ A NG
Sbjct: 233 GHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSD 292
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+LF M +P+ LVS L AC+++G L LG+ HG ++R N I+ T+
Sbjct: 293 EALRLFRNMQASGI-QPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD-FNCILGTAA 350
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG L LF M++D+ + ++ MI+ HG+G++AL++F EM G+ PD
Sbjct: 351 IDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +LSA SH+GLV EG L F M ++I P +HY C+VDL+ R+G++ EA +L+
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLT 470
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SM + +W +LLS + LE+GE A N+ ++ L+SN+YA ++W
Sbjct: 471 SMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDK 530
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V ++R M G + PG S +E+ + F+ +D+SHP + I + +++ +++ GY
Sbjct: 531 VRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGY 590
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P V D++E+ K ++L HS+KLAIAF L++ G+ + I +NLR+C DCH K
Sbjct: 591 IPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKY 650
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I +REI+VRD KRFH FKDG CSCRDYW
Sbjct: 651 ISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 153/292 (52%), Gaps = 8/292 (2%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
PD+ TF ACA+L L+ G + F G++ D+FV +SL+++Y + + A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F +M ++ +WS ++A S G + ++++ M E + +E +++ V+ ACT
Sbjct: 163 VKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRM-REDGVKGDEVVMIGVIQACTA 221
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ +G HG L+R+ ++V+ TSL+DMY K G L+ +F +M + +++S M
Sbjct: 222 ARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAM 281
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLE 363
ISG A +GQ EAL +F M G++PD V L ACS+ G + G + F + +
Sbjct: 282 ISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFD 341
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + +D+ + G L A +++ +M ++ ++W ++++ H
Sbjct: 342 FNCILGT----AAIDMYSKCGSLASA-QMLFNMISDRDLILWNAMIACCGAH 388
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 4/205 (1%)
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
H+ G + L++F + RP+ + LSAC LG L G+
Sbjct: 84 HSRRGSPASALRVFRAL--PPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKD 141
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V V +SL+ +Y + G + + +F M + ++T+S M++G GQ +A+ ++ M
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
+G++ D+VV +GV+ AC+ A V G + L + + V +VD+ + G+L
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHL-LRHGMRMDVVTATSLVDMYAKNGLL 260
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
A + M + +NDV W +++S
Sbjct: 261 DVACRVFGLM-VHRNDVSWSAMISG 284
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/565 (37%), Positives = 323/565 (57%), Gaps = 8/565 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
++ + +++ A + G+ + + L+ S GS++ A +F ++ +NT+
Sbjct: 178 DISQGREIEARTVASGYASDSIVQNALINM--YSKCGSLESARKVFDRLKNRDVIAWNTM 235
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I G+ K+ +AL L+ M +P+ TF L AC L+ L++G IH V + G+
Sbjct: 236 ISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGY 295
Query: 163 ECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
E DL + N L+NMY KC +E A +F+++ + V +W+ +I A+ G + L +F
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFK 355
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M E P E L +VLSAC LGA GK H + +V++E SL++MY +C
Sbjct: 356 QMQLENV-APNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G L+ + +F + DK +++S +I+ A HG + L F E+L+EGL DDV V L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SACSH G++ EG+ F M ++ + P +H+ C+VDL+ RAG L A LI MP +
Sbjct: 475 SACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP-SDYVLLSNMYARAQRWYDVAKIRT 460
V W SLLS K+H++ + A LF++ S S LLSN+YA A RW DV K R
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN 594
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
A++ ++PG S +E+ V++FV+ D+SHP + I I ++ Q+K GY PD+
Sbjct: 595 RRAAR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRM 651
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL +V E+EK + L HS+KLAIA+ LI G+P+ I +NLR C DCH K IS I
Sbjct: 652 VLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVG 711
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
R+I+VRD RFH F++G+CSC+DYW
Sbjct: 712 RKIVVRDSTRFHHFENGSCSCKDYW 736
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 198/397 (49%), Gaps = 20/397 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+ + + K+L++ + +HA +L+ ++ + L+ A ++ A F ++ +
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCR--DLELARKTFDEMGK 122
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFER---GVEPDNFTFPALFKACAKLQALKEG 150
+N LI G+ + + AL +Y +M + G++PD TF + AC+ + + +G
Sbjct: 123 KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQG 182
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+I G+ D VQN+LINMY KC +E A +F ++ + V +W+ +I+ +A
Sbjct: 183 REIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQ 242
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G ++ L+LF M +P + +L+ACT+L L+ G+ H + + ++++
Sbjct: 243 GAATQALELFQRMGPNDP-KPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVI 301
Query: 271 ETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
L++MY KC LE+ +F + + +T++++I +GQ K+AL IF +M E
Sbjct: 302 GNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLEN 361
Query: 330 LEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+ P+++ VLSAC+ G +G L+ R K + V ++++ R G
Sbjct: 362 VAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKAD------VVLENSLMNMYNRCG 415
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
L + + + ++ ++ V W +L++A H + G
Sbjct: 416 SLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTG 451
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 149/286 (52%), Gaps = 3/286 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+ A ++F I+ P + + ++ F + + EAL Y M G+ PD F
Sbjct: 6 GSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAI 65
Query: 139 KACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
C+ + LK+G +H + + E D+ + +LI MY +C +E A F +M +K++
Sbjct: 66 GVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTL 125
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+W+A+IA ++ NG LK++ +M + + +P+ S L AC+ +G + G+
Sbjct: 126 VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREI 185
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+ + A + IV+ +LI+MY KCG LE +F + ++ + ++ MISG A G
Sbjct: 186 EARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAA 245
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+AL +F M +P+ V ++G+L+AC++ + +G ++K
Sbjct: 246 TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK 291
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 126/248 (50%), Gaps = 21/248 (8%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MYGKC V A A+F ++ + SW+ I+AA A NG + E L + M E RP+ +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGL-RPDGA 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+ V + C+ L G+ H ++ + ++I+ T+LI MY +C LE F
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR---EGLEPDDVVYVGVLSACSHAGLV 350
M K +T++ +I+G + +G + AL I+ +M+ EG++PD + + L ACS G +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 351 NEGLLCFDRMKLEYRIVPT-------VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
++G ++E R V + VQ+ ++++ + G L A ++ + ++ +
Sbjct: 180 SQG------REIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLK-NRDVI 230
Query: 404 VWRSLLSA 411
W +++S
Sbjct: 231 AWNTMISG 238
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/629 (36%), Positives = 346/629 (55%), Gaps = 66/629 (10%)
Query: 41 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFN 100
CKNL ++H +K G + + L+ CA+S ++ YA + EP AF FN
Sbjct: 182 CKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFN 241
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIH----- 154
TL+RG+ + E ++ ++ EM +G + PD+F+F + KA A ++L+ G Q+H
Sbjct: 242 TLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALK 301
Query: 155 ----GHVFK-------------VGFECDLFVQ---------------------------- 169
H+F VGF +F +
Sbjct: 302 HGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREI 361
Query: 170 ------------NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
N ++ Y K ++E A IF +M + SWS +I + NG ++E
Sbjct: 362 FDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESF 421
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F E+ + RP E L VLSAC+ GA + GK HG + ++ + V V +LIDM
Sbjct: 422 SYFRELLRAEM-RPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDM 480
Query: 278 YVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y +CG + +F M +K + +++ MI+GLAMHG G+EA+ IF+EM G+ PD++
Sbjct: 481 YSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEIS 540
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ +L ACSHAGL+ EG F +MK Y I P V+HYGC+VDL GR+G L +A I M
Sbjct: 541 FISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQM 600
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
PI +VWR+LL A H N+E+ E + L +++ ++ D VLLSN+YA A +W DVA
Sbjct: 601 PIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVA 660
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYS 515
IR M + + + +SLVEV + +YKF + ++ +E + ++ +L+ E GY+
Sbjct: 661 SIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYA 720
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P+++ L DV+E+EK +++ HS+KLA+AFAL L +G+ IRI +NLR+C DCH KL
Sbjct: 721 PEVASALYDVEEEEKEDQVSKHSEKLALAFALARLPKGANIRIVKNLRICRDCHAVMKLT 780
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
S +Y EI++RDR RFH FKDG+CSC DY
Sbjct: 781 SRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/594 (36%), Positives = 332/594 (55%), Gaps = 32/594 (5%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
K+LE KKV + + G N + L+ G M IF + + +NT
Sbjct: 237 KDLELGKKVCNLMTELGVKSNTLVVNALLDM--YMKCGDMYAVREIFDEFSDKNLVMYNT 294
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
++ +V+ E L + +EM ++G PD T + ACA+L L G H +VF+ G
Sbjct: 295 IMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNG 354
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
E + N++I+MY KC K E A +F M K+V +W+++IA +G L++FG
Sbjct: 355 LERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFG 414
Query: 222 EM--NNEKCWRP-----------EESI-----------------LVSVLSACTHLGALDL 251
EM +N W EE+I +V + SAC +LGALDL
Sbjct: 415 EMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDL 474
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
K + + +N +++ + T+L+DM+ +CG + +F M + ++ I A+
Sbjct: 475 AKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAV 534
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
G K A+ +F EML++ ++ DD V+V +L+A SH G V++G F M+ + + P +
Sbjct: 535 EGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIV 594
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
HYGC+VDL+GRAG+L EA +L++SMPI+ NDV+W S L+A + H N+E A + + Q+
Sbjct: 595 HYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQL 654
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
+VLLSN+YA A +W DVA++R +M KG + G S +EV + +F S D S
Sbjct: 655 APEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDES 714
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
H I M+ ++ ++ GY PD + VL DVDE EK L HS+KLA+A+ LI+
Sbjct: 715 HTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTG 774
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+G PIR+ +NLRMC+DCH++ KL+S +Y REI VRD R+H FK+G CSCRD+W
Sbjct: 775 KGIPIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 222/456 (48%), Gaps = 56/456 (12%)
Query: 2 TRTSVLHQS---LLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWG 58
T T+ LHQS LLL + PK L +TCK L E K++H ++LK G
Sbjct: 3 TTTTTLHQSSSPLLLPTTTQKPKNSSL-------------QTCKTLIELKQLHCNMLKKG 49
Query: 59 FFWNPFCASNLVATCA-LSHWGSMDYACSIFRQIDEP---GAFDFNTLIRGFVKEVEFEE 114
F + L+A C + S++YA + F++ DE + NTLIRG+ +E
Sbjct: 50 VF----NINKLIAACVQMGTHESLNYALNAFKE-DEGTKCSLYTCNTLIRGYAASGLCKE 104
Query: 115 ALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
A+F+Y M G+ PDNFTFP L AC+K+ A EG+Q+HG V K+G DLFV NSLI
Sbjct: 105 AIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLI 164
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
+ Y C KV+ +F +M +++V SW+++I ++ + E + LF EM E P
Sbjct: 165 HFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM-VEVGVEPNP 223
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+V +SAC L L+LGK + N +V +L+DMY+KCG + +F
Sbjct: 224 VTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDE 283
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC--------- 344
+DK + Y+ ++S HG E L + EML++G PD V + ++AC
Sbjct: 284 FSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVG 343
Query: 345 --SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
SHA + GL D + ++D+ + G A ++ SM +
Sbjct: 344 KSSHAYVFRNGLERLDNIS------------NAIIDMYMKCGKREAACKVFDSMS-NKTV 390
Query: 403 VVWRSLLSASKVHHNLEI-----GEIAAKNLFQINS 433
V W SL++ LE+ GE+ NL N+
Sbjct: 391 VTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 329/554 (59%), Gaps = 27/554 (4%)
Query: 79 GSMDYACSIFRQID----EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
G ++ A S+F +++ +P +N L+ G EE L + M G +P++ +
Sbjct: 855 GFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSM 914
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
++ +A ++L L G + HG+V + GF+CD++V SLI+MY K + A A+F M
Sbjct: 915 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKN 974
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNE-----------------------KCWRP 231
+++ +W+++++ ++ G++ + L+L +M E K + P
Sbjct: 975 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMP 1034
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ + +L AC L L GK H IRN +V V T+LIDMY K L+ +F
Sbjct: 1035 NSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF 1094
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
R + +K +++ MI G A+ G GKEA+S+F+EM + G+ PD + + +LSAC ++GL+
Sbjct: 1095 RRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIG 1154
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG FD M +YRIVP ++HY C+VDL+GRAG L EA +LI +MP++ + +W +LL +
Sbjct: 1155 EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 1214
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
++H NL E AAKNLF++ ++ ++Y+L+ N+Y+ RW D+ +R M + G+
Sbjct: 1215 CRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 1274
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
+S +++ ++V+ F S ++ HP IY ++Q+ ++K GY PD++ V +++DE EK+
Sbjct: 1275 VWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQ 1334
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
+ L H++KLAI + LI + G PIR+ +N R+C+DCH+ K IS++ RE+ +RD RF
Sbjct: 1335 KILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRF 1394
Query: 592 HRFKDGTCSCRDYW 605
H F++G CSC D+W
Sbjct: 1395 HHFREGKCSCNDFW 1408
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 182/358 (50%), Gaps = 45/358 (12%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPF--CA-SNLVATCALSHWGSMDYACSIFRQI 91
LKTC + + ++H ++K GF + + CA N C WG ++ A +F ++
Sbjct: 681 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC----WG-LEKANQVFHEM 735
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P A +N I ++ + ++ + L+ +M ++ + T + +AC K+ AL
Sbjct: 736 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAK 795
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIHG+VF+ G + D+ + N LI+MY K K+E A +F M+ ++ +SW+++I+++A+ G
Sbjct: 796 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 855
Query: 212 LWSECLKLFGEMNNE----------------------------------KCWRPEESILV 237
++ LF E+ + + ++P S +
Sbjct: 856 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 915
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
SVL A + LG L++GK THG ++RN +V V TSLIDMYVK L +F M ++
Sbjct: 916 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNR 975
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
++ ++SG + G ++AL + ++M +EG++PD V + G++S + G + +
Sbjct: 976 NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFM 1033
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 148/307 (48%), Gaps = 9/307 (2%)
Query: 61 WNPFCAS-NLVATCALSHWGSMDY--ACSIFRQIDEPGAFDFNTLIRGFVKEV-EFEEAL 116
WNP A+ NL++ S+ G D+ A +F +N+ + F L
Sbjct: 604 WNPDAAAKNLIS----SYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVL 659
Query: 117 FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY 176
++ E+ +GV D+ + K C ++ + GM+IHG + K GF+ D++++ +L+N Y
Sbjct: 660 EVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFY 719
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
G+C +E A+ +F +M W+ I + + + ++LF +M + E + +
Sbjct: 720 GRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS-FLKAETATI 778
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
V VL AC +GAL+ K HG + R +V + LI MY K G LE +F M +
Sbjct: 779 VRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMEN 838
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ +++ MIS A G +A S+F E+ ++PD V + +LS G E L
Sbjct: 839 RNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNI 898
Query: 357 FDRMKLE 363
RM+ E
Sbjct: 899 LQRMQGE 905
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 330/582 (56%), Gaps = 20/582 (3%)
Query: 36 TILKTCKNLEEFK------KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
++L+ C +E + +VH + +K G + F ++ L+ S G MD A +
Sbjct: 1000 SVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL--YSKGGKMDEAEFLLH 1057
Query: 90 QIDEPGAFDF-----NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
G +DF N ++ G++K + +AL ++ M E G+ D T KA L
Sbjct: 1058 -----GKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
LK+G QI + K+GF DL+V + +++MY KC + A +F ++ + +W+ +I
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ + NG L ++ M +P+E +++ A + L AL+ GK H ++++
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGV-QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+L+ V TSL+DMY KCG ++ +FR M + + ++ M+ GLA HG EAL++F
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRT 1291
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M G++PD V ++GVLSACSH+GL +E FD M Y I P ++HY C+VD +GRAG
Sbjct: 1292 MQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAG 1351
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ EA +I SMP + + ++R+LL A + + E + A L ++ S YVLLSN
Sbjct: 1352 RIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA +++W DV R M K + + PGFS ++V KV+ FV DRSHP IYE I
Sbjct: 1412 IYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIED 1471
Query: 505 MEWQLKFEG-YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ +++ EG Y PD L DV+E+EK L HS+KLAIAF LI + IR+ +NLR
Sbjct: 1472 LMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLR 1531
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH+ K IS + +REI++RD RFH F++GTCSC DYW
Sbjct: 1532 VCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 155/373 (41%), Gaps = 25/373 (6%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
YA +F F +N + F+ + A+ + + + D+ T + A
Sbjct: 846 YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L G QIH V K F + V NSL+NMY K V A F + + SW+
Sbjct: 906 GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNT 965
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA---LDLGKCTHGSL 259
+I+++A N L E + F ++ + +P++ L SVL AC+ LG H
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGL-KPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+ + V T+LID+Y K G +++ L D +++ ++ G + ++AL
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG----- 374
FS M G+ D++ + A C +K +I G
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASG----------CLINLKQGKQIQAYAIKLGFNNDL 1134
Query: 375 ----CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
V+D+ + G + ALEL + + ++V W +++S + + E ++ +L +
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG-YIENGDEDHALSVYHLMR 1192
Query: 431 INSHHPSDYVLLS 443
++ P +Y +
Sbjct: 1193 VSGVQPDEYTFAT 1205
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
++ + LK G + H + G D ++ N+LI MY KC + A +F + + +
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 199 SWSAIIAAHASNGLWS-----ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+W++I+AA+A S E +LFG + E + L +L C G + + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLL-REFGFSITRLTLAPLLKLCLLSGFVQVSE 737
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG ++ L++ V +L+++Y K G + + LF M ++ + ++VM+ +
Sbjct: 738 TVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797
Query: 314 QGKEALSIFSEMLREGLEPD 333
EAL FS R G PD
Sbjct: 798 FQDEALRFFSAFHRSGFFPD 817
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 172/411 (41%), Gaps = 38/411 (9%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L+ K+ HA ++ G + + +NL+ S GS+ A +F + + +N++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITM--YSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 103 IRGFVK--EVEFE---EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ + + + +E E L+ + E G T L K C ++ +HG+
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K+GFE DLFV +L+N+Y K V A +F +M ++ W+ ++ A+ N E L
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+ F + + P+ S L C G + ++S N +
Sbjct: 804 RFFSAFHRSGFF-PDFSNL----------------HCVIGGVNSDVSN-NRKRHAEQVKA 845
Query: 278 Y-VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y +K ++G +F ++ ++ GQ A+ F +LR + D V
Sbjct: 846 YAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V +LSA A ++ G + ++ P V ++++ +AG++ A + +
Sbjct: 897 LVIILSAAVGADDLDLGEQIH-ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
P + + + W +++S S +NLE+ I + P + L S + A
Sbjct: 956 P-ELDLISWNTMIS-SYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ L LGK H ++ + + + +LI MY KCG L +F +D+ +T++ +
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 306 ISGLAMHGQGK-----EALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLV--NEGLLCF 357
++ A E +F +LRE G + +L C +G V +E + +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFG-LLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+K+ + + V G +V++ + G++G+A L MP +++ V+W +L A
Sbjct: 743 -AVKIGFELDLFVS--GALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/509 (39%), Positives = 298/509 (58%), Gaps = 3/509 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ LI G V+ F ALF ++ M ++P++FTFP FKA L++ G Q+H
Sbjct: 76 WTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAV 135
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K G D+FV S +MY K E A +F +M ++++A+W+A ++ G + + L
Sbjct: 136 KAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALT 195
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F E E P + ++ SVLSAC L L++GK H ++ N+ V ++L+DMY
Sbjct: 196 AFIEARKEGI-EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMY 254
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML--REGLEPDDVV 336
KCG +E F M ++ +T++ MI G A GQ A+++F EM + P+ V
Sbjct: 255 GKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVT 314
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V VLSACS AG VN G+ F+ M+ Y I P +HY CVVDL+GRAGM+ +A + I+ M
Sbjct: 315 FVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKM 374
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
PI+ VW +LL ASK+ E+G++AA NLF+++ ++VLLSNM+A A RW +
Sbjct: 375 PIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEAT 434
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
+R EM G+ + G S + V+ F ++D SH I M+ ++ +++ GY P
Sbjct: 435 LVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIP 494
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
D S L D++E+EK + HS+K+A+AF LI + G PIRI +NLR+C DCH+ K IS
Sbjct: 495 DTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSAIKFIS 554
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I REIIVRD FHRF+D CSCRDYW
Sbjct: 555 GIVGREIIVRDNNLFHRFRDNQCSCRDYW 583
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 4/280 (1%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
+ +L ++ Q + G H + K + F+ N L+NMY K ++ A +
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+SV +W+A+IA NG ++ L F M + +P + A L + +
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSI-QPNDFTFPCAFKASGSLRSPLV 126
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK H ++ +V V S DMY K G E+ +F M ++ T++ +S +
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
G+ +AL+ F E +EG+EP D + VLSAC+ ++ G + ++ +V +
Sbjct: 187 EGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVG-KSVHTLAVKACVVGNIF 245
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+VD+ G+ G + +A MP ++N V W +++
Sbjct: 246 VGSALVDMYGKCGSIEDAERAFDEMP-ERNLVTWNAMIGG 284
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 3/206 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VHA +K G + F + A S G + A +F ++ E +N + V
Sbjct: 128 KQVHALAVKAGQISDVFVGCS--AFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
E +++AL + E + G+EP +F ++ ACA L L+ G +H K ++F
Sbjct: 186 LEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIF 245
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN-NE 226
V ++L++MYGKC +E A F +M ++++ +W+A+I +A G + LF EM
Sbjct: 246 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 305
Query: 227 KCWRPEESILVSVLSACTHLGALDLG 252
P V VLSAC+ G++++G
Sbjct: 306 HRVAPNYVTFVCVLSACSRAGSVNVG 331
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 330/582 (56%), Gaps = 20/582 (3%)
Query: 36 TILKTCKNLEEFK------KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
++L+ C +E + +VH + +K G + F ++ L+ S G MD A +
Sbjct: 1000 SVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDL--YSKGGKMDEAEFLLH 1057
Query: 90 QIDEPGAFDF-----NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
G +DF N ++ G++K + +AL ++ M E G+ D T KA L
Sbjct: 1058 -----GKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCL 1112
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
LK+G QI + K+GF DL+V + +++MY KC + A +F ++ + +W+ +I
Sbjct: 1113 INLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMI 1172
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ + NG L ++ M +P+E +++ A + L AL+ GK H ++++
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGV-QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY 1231
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+L+ V TSL+DMY KCG ++ +FR M + + ++ M+ GLA HG EAL++F
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRT 1291
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M G++PD V ++GVLSACSH+GL +E FD M Y I P ++HY C+VD +GRAG
Sbjct: 1292 MQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAG 1351
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ EA +I SMP + + ++R+LL A + + E + A L ++ S YVLLSN
Sbjct: 1352 RIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSN 1411
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA +++W DV R M K + + PGFS ++V KV+ FV DRSHP IYE I
Sbjct: 1412 IYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIED 1471
Query: 505 MEWQLKFEG-YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ +++ EG Y PD L DV+E+EK L HS+KLAIAF LI + IR+ +NLR
Sbjct: 1472 LMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLR 1531
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCH+ K IS + +REI++RD RFH F++GTCSC DYW
Sbjct: 1532 VCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 155/373 (41%), Gaps = 25/373 (6%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
YA +F F +N + F+ + A+ + + + D+ T + A
Sbjct: 846 YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L G QIH V K F + V NSL+NMY K V A F + + SW+
Sbjct: 906 GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNT 965
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA---LDLGKCTHGSL 259
+I+++A N L E + F ++ + +P++ L SVL AC+ LG H
Sbjct: 966 MISSYAQNNLEMEAICTFRDLLRDGL-KPDQFTLASVLRACSTGDEGEYFTLGSQVHVYA 1024
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I+ + V T+LID+Y K G +++ L D +++ ++ G + ++AL
Sbjct: 1025 IKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKAL 1084
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG----- 374
FS M G+ D++ + A C +K +I G
Sbjct: 1085 EHFSLMHEMGIPIDEITLATAIKASG----------CLINLKQGKQIQAYAIKLGFNNDL 1134
Query: 375 ----CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
V+D+ + G + ALEL + + ++V W +++S + + E ++ +L +
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISG-YIENGDEDHALSVYHLMR 1192
Query: 431 INSHHPSDYVLLS 443
++ P +Y +
Sbjct: 1193 VSGVQPDEYTFAT 1205
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 6/200 (3%)
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
++ + LK G + H + G D ++ N+LI MY KC + A +F + + +
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 199 SWSAIIAAHASNGLWS-----ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+W++I+AA+A S E +LFG + E + L +L C G + + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLR-EFGFSITRLTLAPLLKLCLLSGFVQVSE 737
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG ++ L++ V +L+++Y K G + + LF M ++ + ++VM+ +
Sbjct: 738 TVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENS 797
Query: 314 QGKEALSIFSEMLREGLEPD 333
EAL FS R G PD
Sbjct: 798 FQDEALRFFSAFHRSGFXPD 817
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 172/411 (41%), Gaps = 38/411 (9%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L+ K+ HA ++ G + + +NL+ S GS+ A +F + + +N++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITM--YSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 103 IRGFVK--EVEFE---EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ + + + +E E L+ + E G T L K C ++ +HG+
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K+GFE DLFV +L+N+Y K V A +F +M ++ W+ ++ A+ N E L
Sbjct: 744 VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEAL 803
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+ F + + P+ S L C G + ++S N +
Sbjct: 804 RFFSAF-HRSGFXPDFSNL----------------HCVIGGVNSDVSN-NRKRHAEQVKA 845
Query: 278 Y-VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y +K ++G +F ++ ++ GQ A+ F +LR + D V
Sbjct: 846 YAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V +LSA A ++ G + ++ P V ++++ +AG++ A + +
Sbjct: 897 LVIILSAAVGADDLDLGEQIH-ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
P + + + W +++S S +NLE+ I + P + L S + A
Sbjct: 956 P-ELDLISWNTMIS-SYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 13/174 (7%)
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ L LGK H ++ + + + +LI MY KCG L +F +D+ +T++ +
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 306 ISGLAMHGQGK-----EALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLV--NEGLLCF 357
++ A E +F +LRE G + +L C +G V +E + +
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFG-LLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+K+ + + V G +V++ + G++G+A L MP +++ V+W +L A
Sbjct: 743 -AVKIGFELDLFVS--GALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 316/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILKTC +LE +++H+ ++K F N + S L+ A G +D A I +
Sbjct: 478 SILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYA--KLGKLDTAWDILIRFA 535
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ T+I G+ + ++AL + +M +RG+ D ACA LQALKEG Q
Sbjct: 536 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 595
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH GF DL QN+L+ +Y KC +E A F+Q + +W+A+++ +G
Sbjct: 596 IHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGN 655
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L++F MN E S + A + + GK H + + V
Sbjct: 656 NEEALRVFARMNREGI-DSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 714
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
++I MY KCG + F ++ K +++++ MI+ + HG G EAL F +M+ + P
Sbjct: 715 AIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRP 774
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V VGVLSACSH GLV++G+ F+ M EY + P +HY CVVD++ RAG+L A +
Sbjct: 775 NHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDF 834
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I MPI+ + +VWR+LLSA VH N+EIGE AA +L ++ + YVLLSN+YA ++W
Sbjct: 835 ILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKW 894
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
R +M KG+ + PG S +EV ++ F D++HP D I+E + +
Sbjct: 895 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEI 954
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY D +L ++ +++K + HS+KLAI+F L+ L PI + +NLR+CNDCH +
Sbjct: 955 GYVQDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWI 1014
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S + REIIVRD RFH F+ G CSC+DYW
Sbjct: 1015 KFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1047
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L CK +E + ++H VLK GF + + + LV+ H GS+ A IF +
Sbjct: 276 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGSLISAEHIFSNMS 333
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ A +NTLI G + E+A+ L+ M G+EPD+ T +L AC+ L G Q
Sbjct: 334 QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQ 393
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+GF + ++ +L+N+Y KC +E A F + + ++V W+ ++ A+
Sbjct: 394 LHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDD 453
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++F +M E+ P + S+L C LG L+LG+ H +I+ LN V +
Sbjct: 454 LRNSFRIFRQMQIEEI-VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCS 512
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ + A K ++++ MI+G + +AL+ F +ML G+
Sbjct: 513 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 572
Query: 333 DDVVYVGVLSACSHAGLVNEG 353
D+V +SAC+ + EG
Sbjct: 573 DEVGLTNAVSACAGLQALKEG 593
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 177/376 (47%), Gaps = 8/376 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
LKT +L+E +K+H+ +LK GF N + L+ G +D A +F ++ E F
Sbjct: 78 LKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFK--GDLDGALKVFDEMPERTIF 135
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGMQIHGH 156
+N +I+ + L+ M V P+ TF + +AC A QIH
Sbjct: 136 TWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 195
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ G V N LI++Y + V+ A +F + K +SW A+I+ + N E
Sbjct: 196 IIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEA 255
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++LF +M P SVLSAC + +L++G+ HG +++ + + V +L+
Sbjct: 256 IRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 314
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y G L +F M+ + +TY+ +I+GL+ G G++A+ +F M +GLEPD
Sbjct: 315 LYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNT 374
Query: 337 YVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++ ACS G + G L KL + ++ G +++L + + AL
Sbjct: 375 LASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE--GALLNLYAKCSDIETALNYFLE 432
Query: 396 MPIQQNDVVWRSLLSA 411
+ +N V+W +L A
Sbjct: 433 TEV-ENVVLWNVMLVA 447
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 182/392 (46%), Gaps = 20/392 (5%)
Query: 37 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+L+ C+ + +++HA ++ G + + L+ S G +D A +F +
Sbjct: 175 VLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDL--YSRNGFVDRARRVFDGLY 232
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G K EA+ L+ +M+ G+ P + F ++ AC K+++L+ G Q
Sbjct: 233 LKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 292
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG V K+GF D +V N+L+++Y + A IF M Q+ +++ +I + G
Sbjct: 293 LHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 352
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ ++LF M + P+ + L S++ AC+ G L G+ H + A N +E
Sbjct: 353 GEKAMELFKRMQLDGL-EPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEG 411
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+++Y KC +E L F + + ++VM+ + + + IF +M E + P
Sbjct: 412 ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--VVDLMGRAGMLG 387
+ Y +L C G + G ++ +I+ T + Y C ++D+ + G L
Sbjct: 472 NQYTYPSILKTCIRLGDLELG------EQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLD 525
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A +++ + DVV + + A +N +
Sbjct: 526 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFD 555
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 3/221 (1%)
Query: 126 GVEPDNFTFPALFKACAKLQ-ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
G+ P++ T L + C K +L EG ++H + K+GF+ + + L++ Y ++
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F +M ++++ +W+ +I AS L + LFG M NE P E VL AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENV-TPNEGTFSGVLEACR 180
Query: 245 HLG-ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
A D+ + H +I + IV LID+Y + G +++ +F + K ++
Sbjct: 181 GGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
MISGL+ + EA+ +F +M G+ P + VLSAC
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSAC 281
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +S I ++G K++ + + + Q AS++AI + + + E + G + E
Sbjct: 6 VSSSFIFIHGVPRKLK-TRTVLRTLCQIRRASFTAISVSISED----ESFQENGIDSVEN 60
Query: 228 CW-RPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
C RP L +L C G+LD G+ H +++ N + L+D Y+ G L+
Sbjct: 61 CGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLD 120
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
L +F M ++ T++ MI LA + +F M+ E + P++ + GVL AC
Sbjct: 121 GALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEAC- 179
Query: 346 HAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVV-----DLMGRAGMLGEALELIQSMPIQ 399
G + FD + ++ RI+ +V DL R G + A + + ++
Sbjct: 180 -----RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK 234
Query: 400 QNDVVWRSLLSA 411
+ W +++S
Sbjct: 235 DHS-SWVAMISG 245
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 315/527 (59%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +FR + E + ++ +I+G + +EA+ + EM G++ D + F ++
Sbjct: 216 GMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVL 274
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L A+ +G QIH + + + ++V ++LI+MY KC+ + +A +F +M QK+V
Sbjct: 275 PACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 334
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++ + G E +K+F +M P+ L +SAC ++ +L+ G HG
Sbjct: 335 SWTAMVVGYGQTGRAGEAVKIFLDMQRSGI-DPDHYTLGQAISACANISSLEEGSQFHGK 393
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I + V SL+ +Y KCG ++ LF M + +++++ M+S A G+ EA
Sbjct: 394 AITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEA 453
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +M++ GL+PD V GV+SACS AGLV +G F+ M EY IVP+ HY C++D
Sbjct: 454 IQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMID 513
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L R+G + EA+ I MP + + + W +LLSA + NLEIG+ AA++L +++ HHP+
Sbjct: 514 LFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 573
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y LLS++YA +W VA++R M K + + PG S ++ K++ F + D S P D I
Sbjct: 574 YTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQI 633
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++ GY PD S V DV+E K + L HS++LAIAF LI + G PIR+
Sbjct: 634 YAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRV 693
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TK IS + REI+VRD RFHRFKDGTCSC D+W
Sbjct: 694 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 174/385 (45%), Gaps = 43/385 (11%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F WN L+A H M+ F ++ + +N LI G+ A+
Sbjct: 70 FSWNNL----LLAYSKSGHLSEME---RTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 122
Query: 119 YNEMFER-GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
YN M + T + K + + G QIHG V K+GFE L V + L++MY
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYS 182
Query: 178 K-------------------------------CEKVEFASAIFKQMDQKSVASWSAIIAA 206
K C +E A +F+ M++ SV SWSA+I
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSV-SWSAMIKG 241
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
A NG+ E ++ F EM E + ++ SVL AC LGA++ G+ H +IR
Sbjct: 242 LAQNGMEKEAIECFREMKIEGL-KMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQD 300
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ V ++LIDMY KC CL +F M K ++++ M+ G G+ EA+ IF +M
Sbjct: 301 HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQ 360
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
R G++PD +SAC++ + EG F + ++ + +V L G+ G +
Sbjct: 361 RSGIDPDHYTLGQAISACANISSLEEGSQ-FHGKAITAGLIHYITVSNSLVTLYGKCGDI 419
Query: 387 GEALELIQSMPIQQNDVVWRSLLSA 411
++ L M + +++V W +++SA
Sbjct: 420 DDSTRLFNEMNV-RDEVSWTAMVSA 443
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 71/341 (20%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ A K C L A + IHG++ + + F+ N++++ Y +A +F +
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 194 QKSVASWSAIIAAHASNGLWSE-------------------------------CLKLFGE 222
Q ++ SW+ ++ A++ +G SE +K +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M + L+++L + G + LGK HG +I+ ++V + L+DMY K G
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185
Query: 283 C-------------------------------LEKGLCLFRMMADKCQLTYSVMISGLAM 311
C +E L LFR M +K +++S MI GLA
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQ 244
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL---LCFDRMKLEYRIVP 368
+G KEA+ F EM EGL+ D + VL AC G +N+G C R L+ I
Sbjct: 245 NGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYV 304
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++D+ + L A + M Q+N V W +++
Sbjct: 305 G----SALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMV 340
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/571 (38%), Positives = 322/571 (56%), Gaps = 4/571 (0%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T L C NLE K VHA V+ G N + LV +GSM A + + + +
Sbjct: 367 TALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTM--YGKFGSMAAAQRVCKIMPDRD 424
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA-CAKLQALKEGMQIH 154
+N LI G E A+ +N + E GV + T L A + L GM IH
Sbjct: 425 EVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIH 484
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
H+ GFE + FVQ+SLI MY +C + ++ IF + K+ ++W+AI++A+A G
Sbjct: 485 AHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGE 544
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E LKL +M N+ + S V+ + +L LD G+ H +I++ N V +
Sbjct: 545 EALKLIIKMRNDGIHLDQFSFSVA-HAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNAT 603
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG ++ + + Q +++++IS LA HG ++A F EML GL PD
Sbjct: 604 MDMYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDH 663
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V +V +LSACSH GLV+EGL F M ++ + ++H C++DL+GRAG L EA I
Sbjct: 664 VTFVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFIN 723
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP+ D+VWRSLL+A K+H NLE+ AA LF+++S S YVL SN+ A +RW D
Sbjct: 724 KMPVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRD 783
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V +R +M S + + P S V++ +V F D+ HP IY + +++ ++ GY
Sbjct: 784 VENVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGY 843
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD S L+D DE++K L HS+++A+AF LI+ S+GSP+RI +NLR+C DCH+ K+
Sbjct: 844 MPDTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKM 903
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S I R+II+RD RFH F G CSC DYW
Sbjct: 904 VSQIIGRKIILRDAYRFHHFSSGKCSCSDYW 934
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S +GS+++A +F ++ E +N L+ GFV+ +++A+ + M E GV P ++
Sbjct: 3 SKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAA 62
Query: 136 ALFKACAKLQALKEG-MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+L AC + + EG Q+H HV K G CD+FV SL++ YG V +FK++++
Sbjct: 63 SLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEE 122
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
++ SW++++ +A NG E + ++ + + + E+ + +V+ +C L LG
Sbjct: 123 PNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVY-CNENAMATVIRSCGVLVDKMLGYQ 181
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
GS+I++ V V SLI M+ C +E+ C+F M ++ ++++ +I+ +G
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+++L FS+M + D + +L C A
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSA 274
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 175/372 (47%), Gaps = 26/372 (6%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI---FRQIDEPGAFDFNTLIRG 105
+VHAHV+K G + F V T L +G+ + + F++I+EP + +L+ G
Sbjct: 80 QVHAHVIKCGLACDVF-----VGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVG 134
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ +E + +Y + GV + + ++C L G Q+ G V K G +
Sbjct: 135 YAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTT 194
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+ V NSLI+M+G C+ +E AS +F M ++ SW++II A NG + L+ F +M
Sbjct: 195 VSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRY 254
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
+ + + ++L C L G+ HG ++++ NV V SL+ MY + G E
Sbjct: 255 THA-KTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSE 313
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M ++ ++++ M++ +G AL + EML+ + V + LSAC
Sbjct: 314 DAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACY 373
Query: 346 HAGLVNEGLLCFDRMKL--EYRIVPTVQHY----GCVVDLMGRAGMLGEALELIQSMPIQ 399
+ + +K+ + I+ + H +V + G+ G + A + + MP
Sbjct: 374 N----------LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMP-D 422
Query: 400 QNDVVWRSLLSA 411
+++V W +L+
Sbjct: 423 RDEVTWNALIGG 434
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 186/388 (47%), Gaps = 14/388 (3%)
Query: 30 KEQECLTILKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS 86
E T++++C L + +V V+K G A++L++ + S++ A
Sbjct: 159 NENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISM--FGNCDSIEEASC 216
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F + E +N++I V E++L +++M + D T AL C Q
Sbjct: 217 VFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQN 276
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L+ G +HG V K G E ++ V NSL++MY + K E A +F +M ++ + SW++++A+
Sbjct: 277 LRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMAS 336
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
H NG + L+L EM + + LSAC +L L K H +I
Sbjct: 337 HVDNGNYPRALELLIEMLQTR-KATNYVTFTTALSACYNLETL---KIVHAFVILLGLHH 392
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
N+I+ +L+ MY K G + + ++M D+ ++T++ +I G A + + A+ F+ +
Sbjct: 393 NLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLR 452
Query: 327 REGLEPDDVVYVGVLSA-CSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAG 384
EG+ + + V +LSA S L++ G+ + + + + VQ ++ + + G
Sbjct: 453 EEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQ--SSLITMYAQCG 510
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSAS 412
L + I + +N W ++LSA+
Sbjct: 511 DLNTS-NYIFDVLANKNSSTWNAILSAN 537
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 141/287 (49%), Gaps = 17/287 (5%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY K +E A +F +M +++ ASW+ +++ G + + ++ F M E RP
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHM-LEHGVRPSSY 59
Query: 235 ILVSVLSACTHLGALDLGKC-THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+ S+++AC G + G H +I+ A +V V TSL+ Y G + + +F+
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ + ++++ ++ G A +G KE +S++ + R+G+ ++ V+ +C G++ +
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC---GVLVDK 176
Query: 354 LLCFDRMK--LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+L + + ++ + TV ++ + G + EA + M +++ + W S+++A
Sbjct: 177 MLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMK-ERDTISWNSIITA 235
Query: 412 SKVHHNLEIGEIAAKNLFQIN-SHHPSDYVLLSNMY-----ARAQRW 452
S HN E + + Q+ +H +DY+ +S + A+ RW
Sbjct: 236 SV--HNGHC-EKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRW 279
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/575 (36%), Positives = 331/575 (57%), Gaps = 16/575 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMDYACSIFRQI 91
+++ C L + ++H+ L+ G + + LV A S+ G +MDYA +F ++
Sbjct: 259 SMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERM 318
Query: 92 DEPGAFDFNTLIRGFVKE-VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + LI G+V+ V+ + + L+ EM ++P++ T+ ++ K+CA + G
Sbjct: 319 PKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSG 378
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H HV K V N+L++MY + +E A +F Q+ ++S+ I
Sbjct: 379 RQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI---PCITEGRDF 435
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
L +++ +++ S S++SA +G L G+ H ++ + V
Sbjct: 436 PLDHRIVRMDVGISS--------STFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFV 487
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SL+ MY +CG LE F + D+ ++++ MISGLA HG + ALS+F +M+ G+
Sbjct: 488 SNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGV 547
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+P+DV Y+ VLSACSH GLV EG F M+ ++ ++P ++HY C+VDL+ R+G++ EAL
Sbjct: 548 KPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEAL 607
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
E I MP++ + +VW++LL A + H N+E+GEI AKN+ ++ P+ YVLLSN+YA A
Sbjct: 608 EFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAG 667
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W +VA+IR+ M LN+ G S +EV ++F + D SHP +IY + + Q+K
Sbjct: 668 LWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIK 727
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL D+ ++ K + L HS+K+A+AF LI S PIRI +NLR+C DCH+
Sbjct: 728 GMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCADCHS 787
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S REII+RD RFHR KDG CSC +YW
Sbjct: 788 AIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 125/274 (45%), Gaps = 14/274 (5%)
Query: 147 LKEGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAII 204
L+ G +H + + + D V NSL+ +Y +C V A +F M + + SW+A+
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC--THLGALDLGKCTHGSLIRN 262
+ A NG L L GEM E P L + AC L L G
Sbjct: 124 SCLARNGAERGSLLLIGEML-ESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ +V V ++LIDM + G L +F + +K + ++++IS +EA+ +F
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
+ L +G EPD ++SAC+ G V GL + L + +VD+ +
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGLASDACVSCGLVDMYAK 301
Query: 383 AGMLGEALE----LIQSMPIQQNDVV-WRSLLSA 411
+ +G+A++ + + MP +NDV+ W +L+S
Sbjct: 302 SN-IGQAMDYANKVFERMP--KNDVISWTALISG 332
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 314/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + + +N +I +V+ F EA+ L+ + + GV+ ++ TF +
Sbjct: 255 GLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLML 314
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
L +L +G IH V + G++ D V +L+++YG+CE A IF M K V
Sbjct: 315 NVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 374
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ + A+A NG E L+LF EM E RP + LV+VL C HL AL G+ H
Sbjct: 375 TWTVMCVAYAQNGFRKEALQLFQEMQLEG-RRPTSATLVAVLDTCAHLAALQKGRQIHSH 433
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+I N + ++VET+LI+MY KCG + + + +F MA + L ++ M+ A HG E
Sbjct: 434 IIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDET 493
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F++M +G++ D V +V VLSA SH+G V +G F M ++ I PT + YGCVVD
Sbjct: 494 LQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 553
Query: 379 LMGRAGMLGEALELIQSMP-IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
L+GRAG + EA++++ + + ++W +LL A + H+ + + AA+ + + + H
Sbjct: 554 LLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSG 613
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YV+LSN+YA A W V ++R M S+G+ + PG S +E+ +V++F+ DRSHP
Sbjct: 614 AYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHP 673
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + + +++ GY PD +L DV+++ K + L HS++LAIAF LI G+P+R
Sbjct: 674 IYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLR 733
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C+DCHT TK IS + REI+VRD RFH FKDG CSC+DYW
Sbjct: 734 VIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 781
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 165/311 (53%), Gaps = 6/311 (1%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L+ C KN++ ++VH HV GF N +L+ A GS+ A +F +
Sbjct: 8 VALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYA--QCGSVPEAQQVFEIL 65
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ F + +I + ++ +++ AL ++ +M E V P T+ A+ ACA ++LK+GM
Sbjct: 66 ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGM 125
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IHG + + GFE D+FV +LINMY KC V A FK+++ + V SW+A+IAA +
Sbjct: 126 EIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHD 185
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
++ L+ M + P + L +V +A L GK +G + + +V V
Sbjct: 186 QFALARWLYRRMQLDGV-VPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVM 244
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
S ++M+ G L LF M D+ +T++++I+ + EA+ +F + ++G++
Sbjct: 245 NSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVK 304
Query: 332 PDDVVYVGVLS 342
+D+ +V +L+
Sbjct: 305 ANDITFVLMLN 315
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 160/331 (48%), Gaps = 24/331 (7%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+PD F AL + C+ + + G ++H HV GFE + V LI MY +C V A
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F+ +++K V +W+ +I + G + L +F +M E P + V++L+AC
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVM-PTKVTYVAILNACASTE 119
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+L G HG +++ +V V T+LI+MY KCG + F+ + + ++++ MI+
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 179
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
H Q A ++ M +G+ P+ + V +A ++EG K Y +V
Sbjct: 180 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEG-------KFVYGLV 232
Query: 368 PT------VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
+ V+ V++ G AG+LG+A L + M + ++ V W +++ + N G
Sbjct: 233 SSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENF--G 289
Query: 422 EIAAKNLF---QINSHHPSD--YVLLSNMYA 447
E A LF Q + +D +VL+ N+Y
Sbjct: 290 E--AVRLFGRLQQDGVKANDITFVLMLNVYT 318
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/569 (37%), Positives = 320/569 (56%), Gaps = 19/569 (3%)
Query: 47 FKKVHAHVLKWGFF-WNPFCASN----LVATCALSH--WGSMDYACSIFRQIDEPGAFDF 99
F ++HAH+L+ G ++P ++ L A SH +D+ + + P F
Sbjct: 38 FIQLHAHLLRTGLLIFSPVTTTSAFLSLAAVSLPSHRALAVLDHHLTTPHYL--PSTFQC 95
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA-CAKLQALKEGMQIHGHVF 158
N+++R + L + RG + FT L K C+ L Q+H +V
Sbjct: 96 NSILRALSDPSDALRFLCRVRALGRRG---NAFTLAILLKPRCS----LAHARQLHANVV 148
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
G D + SL+ Y + A +F +M + +W+ +I +A N + LK
Sbjct: 149 AEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDALK 208
Query: 219 LFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF EM + P++ + +L AC+ LGALD G+ + + V SLI M
Sbjct: 209 LFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLITM 268
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y++CGC++K +F K +T++ MISGLA +G G +A+S+F EM+R + PD+ +
Sbjct: 269 YLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQTF 328
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS-M 396
GVLSACSH+GLV+EG FD M+ EY + P V+HYGC+VDLMGRAG+L EA E + + M
Sbjct: 329 TGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTNEM 388
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
+ + +WR+LL A ++H ++++GE NL ++ + DYVLL N YA W V+
Sbjct: 389 KVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSKVS 448
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
+IR M +G+ +PG + VE V++F++ D +HP IYE + ++ QL+ GY P
Sbjct: 449 EIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGYVP 508
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
++S L D+D + K L HS+KLAIAFAL+ Q PIR+A+NLR+C DCH +TK+ S
Sbjct: 509 NVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKMFS 568
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IY R +IVRDR RFH F+ G CSC DYW
Sbjct: 569 AIYRRIVIVRDRTRFHHFQGGKCSCNDYW 597
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 343/576 (59%), Gaps = 13/576 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
+IL+ C +L + K VH +++ G+ + ++ N+ A C G++ + +F
Sbjct: 321 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC-----GNLLASQEVFS 375
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ + +N++I +++ F+EA+ L+ +M + V+PD+ T+ L +L L
Sbjct: 376 GMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHL 434
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G ++H + K+GF ++ V N+L++MY KC ++ + +F+ M + + +W+ IIA+
Sbjct: 435 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 494
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ + L++ M E P+ + ++S+L C+ L A GK HG + + +V
Sbjct: 495 SEDCNLGLRMISRMRTEGV-TPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 553
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V LI+MY KCG L +F++M K +T++ +IS M+G+GK+A+ F EM G
Sbjct: 554 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 613
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PD V +V ++ ACSH+GLV EGL F RMK +Y+I P ++HY CVVDL+ R+ +L +A
Sbjct: 614 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 673
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ I SMP++ + +W +LLSA ++ + EI E ++ + ++N YVL+SN+YA
Sbjct: 674 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAAL 733
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W V IR + ++GL + PG S +E+ KVY F + + ++ + +++ + +
Sbjct: 734 GKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLM 793
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
EGY ++ VL D+DEDEKR+ L GHS++LAIAF L++ G+P+++ +NLR+C DCH
Sbjct: 794 AKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCH 853
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T TK IS I +RE++VRD RFH FKDG CSC DYW
Sbjct: 854 TVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 248/512 (48%), Gaps = 40/512 (7%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP--G 95
L + + K+H+ ++ G + ++ L+A A H+ + S+FR + P
Sbjct: 23 LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYA--HFRDPTSSFSVFR-LASPSNN 79
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +N++IR F EAL LY+E ++PD +TFP++ ACA L + IH
Sbjct: 80 VYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHD 139
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
V +GF DL++ N+LI+MY + ++ A +F++M + V SW+++I+ + +NG W+E
Sbjct: 140 RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNE 199
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+++ N P+ + SVL AC LG+++ G HG + + +VIV L+
Sbjct: 200 ALEIYYRFRNLGV-VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 258
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY K L G +F M + ++++ MI G + G +E++ +F EM+ + +PD +
Sbjct: 259 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLL 317
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+L AC H G + G D M Y T + ++++ + G L + E+
Sbjct: 318 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEVFS 375
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSD--YVLLSNMYARAQ 450
M ++ V W S+++ + + + A LF++ P YV+L +M +
Sbjct: 376 GMKC-KDSVSWNSMINVYIQNGSFD----EAMKLFKMMKTDVKPDSVTYVMLLSMSTQLG 430
Query: 451 RWYDVAKIRTEMASKGLNQSPGFS--LVEV---------ARKVYKFVSQDRSHPAWDNIY 499
+ ++ ++A G N + S LV++ + KV++ + + R W+ I
Sbjct: 431 DLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTII 489
Query: 500 -EMIH--------QMEWQLKFEGYSPDISQVL 522
+H +M +++ EG +PD++ +L
Sbjct: 490 ASCVHSEDCNLGLRMISRMRTEGVTPDMATML 521
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 328/586 (55%), Gaps = 14/586 (2%)
Query: 27 LRLKEQECLTILKTCKNLEE----FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
L+ + ++LK +L E K+VH H +K + F ++ L+ A S M
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID--AYSRNRCMK 469
Query: 83 YACSIFRQIDEPGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
A +F E FD N ++ G+ + + + L L+ M ++G D+FT +FK
Sbjct: 470 EAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C L A+ +G Q+H + K G++ DL+V + +++MY KC + A F + +
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+ +I+ NG +F +M P+E + ++ A + L AL+ G+ H +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ + V TSL+DMY KCG ++ CLF+ + ++ M+ GLA HG+GKE L
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F +M G++PD V ++GVLSACSH+GLV+E M +Y I P ++HY C+ D
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG++ +A LI+SM ++ + ++R+LL+A +V + E G+ A L ++ S Y
Sbjct: 765 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY 824
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSNMYA A +W ++ RT M + + PGFS +EV K++ FV DRS+ + IY
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ M +K EGY P+ L DV+E+EK L HS+KLA+AF L+ +PIR+
Sbjct: 885 RKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVI 944
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K I+ +Y REI++RD RFHRFKDG CSC DYW
Sbjct: 945 KNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N + ++ ++ L + +M E VE D TF + K+ +L G Q+H K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+G + L V NSLINMY K K FA +F M ++ + SW+++IA A NGL E + L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 220 FGEMNNEKC-WRPEESILVSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F M +C +P++ + SVL A + L L L K H I+ + + V T+LID
Sbjct: 404 F--MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 278 YVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y + C+++ LF R D + ++ M++G G + L +F+ M ++G DD
Sbjct: 462 YSRNRCMKEAEILFERHNFD--LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 337 YVGVLSACSHAGLVNEGLLCFD-RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
V C +N+G +K Y + V ++D+ + G + A S
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDS 577
Query: 396 MPIQQNDVVWRSLLSA 411
+P+ +DV W +++S
Sbjct: 578 IPV-PDDVAWTTMISG 592
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G H + + F+ N+LI+MY KC + +A +F +M + + SW++I+AA+A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 210 NGLWSECLK--------LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+ SEC+ LF + + + + L +L C H G + + HG +
Sbjct: 118 S---SECVVENIQQAFLLFRILRQDVVYTSRMT-LSPMLKLCLHSGYVWASESFHGYACK 173
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ V +L+++Y+K G +++G LF M + + +++M+ G +EA+ +
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 322 FSEMLREGLEPDDVV 336
S GL P+++
Sbjct: 234 SSAFHSSGLNPNEIT 248
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
T +L K HA +L F NP F +NL++ S GS+ YA +F ++ +
Sbjct: 51 TSSDLMLGKCTHARILT--FEENPERFLINNLISM--YSKCGSLTYARRVFDKMPDRDLV 106
Query: 98 DFNTLIRGFVKEVE-----FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N+++ + + E ++A L+ + + V T + K C +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
HG+ K+G + D FV +L+N+Y K KV+ +F++M + V W+ ++ A+ G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 213 WSECLKL 219
E + L
Sbjct: 227 KEEAIDL 233
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L LGKCTH ++ + +LI MY KCG L +F M D+ ++++ S
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWN---SI 111
Query: 309 LAMHGQGKEAL--SIFSEMLREGLEPDDVVYVG------VLSACSHAGLV-----NEGLL 355
LA + Q E + +I L + DVVY +L C H+G V G
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
C + + + G +V++ + G + E L + MP ++ V+W +L A
Sbjct: 172 CKIGLDGDEFVA------GALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/579 (37%), Positives = 330/579 (56%), Gaps = 15/579 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
TIL++C + + +++HA +L G + A+ LV A+C L + A +F
Sbjct: 68 TILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGL-----VSVARRLFD 122
Query: 90 QIDEPG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQAL 147
++ G F +N LIR + ++ E A+ LY EM G +EPDNFT+P + KACA L L
Sbjct: 123 EMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDL 182
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G ++H V + + D+FV LI+MY KC V+ A A+F + W+++IAA
Sbjct: 183 GAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAAC 242
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
NG +E L L M E P LVS +SA GAL G+ HG R
Sbjct: 243 GQNGRPAEALALCRNMAAEGI-APTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++TSL+DMY K G + LF + + ++++ MI G MHG A +F M
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361
Query: 328 EG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
E + PD + +VGVLSAC+H G+V E FD M Y I P VQHY C+VD++G +G
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
EA ++I+ M ++ + +W +LL+ K+H N+E+ E+A L ++ +YVLLSN+Y
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIY 481
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A++ +W + A++R M ++GL + S +E+ K + F+ D SHP D IYE + ++E
Sbjct: 482 AQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLE 541
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+ GY PD + V +V++DEKR ++GHS++LAIAF LI G+ + + +NLR+C
Sbjct: 542 GLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCE 601
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH KLIS I +REII+RD R+H F +G CSC+D+W
Sbjct: 602 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ + ++C +A++ G Q+H + G D + L+++Y C V A +F +M
Sbjct: 65 NYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEM 124
Query: 193 -DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+Q +V W+ +I A+A +G ++L+ EM P+ VL AC L L
Sbjct: 125 PNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGA 184
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G+ H ++R A +V V LIDMY KCGC+++ +F + + ++ MI+
Sbjct: 185 GREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQ 244
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYV 338
+G+ EAL++ M EG+ P V V
Sbjct: 245 NGRPAEALALCRNMAAEGIAPTIVTLV 271
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 337/586 (57%), Gaps = 13/586 (2%)
Query: 23 PELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWG 79
PE L K T L+ L++ + +HAH+ F + + N+ A C G
Sbjct: 103 PERTLYSKMLNKCTYLR---KLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-----G 154
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S++ A +F ++ + LI G+ + + EAL L+ +M G +P+ FT +L K
Sbjct: 155 SLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLK 214
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
A + G Q+H K G++ ++ V +SL++MY + + A IF + K+V S
Sbjct: 215 ASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVS 274
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+A+IA HA G ++LF +M + + P SV +AC G+L+ GK H +
Sbjct: 275 WNALIAGHARKGEGEHVMRLFLQMLRQG-FEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I++ + +LIDMY K G ++ +FR + + ++++ +ISG A HG G EAL
Sbjct: 334 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEAL 393
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F +ML+ ++P+++ ++ VL+ACSH+GL++EG F+ MK +++I V H+ VVDL
Sbjct: 394 QLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDL 452
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG L EA + I+ MPI+ VW +LL + ++H N+++G AA+ +F+++ H +
Sbjct: 453 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPH 512
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSN+YA A R D AK+R M G+ + P S VE+ +V+ FV+ D SHP + I
Sbjct: 513 VLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQ 572
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
M ++ ++K GY PD S VL +++ ++ +L+ HS+KLA+AFA++ G IRI
Sbjct: 573 RMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIK 632
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+N+R+C DCH+ K S + REIIVRD RFH F G CSCRDYW
Sbjct: 633 KNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 155/289 (53%), Gaps = 3/289 (1%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+EP+ + + C L+ LK+G IH H+ FE DL + N ++NMY KC +E A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M K + SW+ +I+ ++ +G SE L LF +M + ++P E L S+L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG-FQPNEFTLSSLLKASGTG 219
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+ G+ H ++ +NV V +SL+DMY + + + +F +A K ++++ +I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+G A G+G+ + +F +MLR+G EP Y V +AC+ +G + +G + ++
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV-IKSGG 338
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
P ++D+ ++G + +A ++ + + ++Q+ V W S++S H
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 386
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+ CG LE L+ M +KC TY + K+ +I + + E D V+
Sbjct: 96 INCGSLEPERTLYSKMLNKC--TYLRKL---------KQGRAIHAHIQSSTFEDDLVLLN 144
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM-- 396
+L+ + G + E FD+M + + TV ++ ++G EAL L M
Sbjct: 145 FILNMYAKCGSLEEAQDLFDKMPTKDMVSWTV-----LISGYSQSGQASEALALFPKMLH 199
Query: 397 -PIQQNDVVWRSLLSASKV----HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
Q N+ SLL AS HH ++ + K + +N H S L +MYAR
Sbjct: 200 LGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSS---LLDMYARWAH 256
Query: 452 WYDVAKIRTEMASKGL 467
+ I +A+K +
Sbjct: 257 MREAKVIFNSLAAKNV 272
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 340/575 (59%), Gaps = 12/575 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++K+C +L+E + +H LK G N + L+ AL+ +D A S+F +
Sbjct: 309 SVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMV--ALTKCKEIDDAFSLFSLMH 366
Query: 93 E-PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +I G+++ + ++A+ L++ M GV+P++FT+ + +Q
Sbjct: 367 GVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQHAVFIS 422
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH V K +E V +L++ + K + A +F+ ++ K V +WSA++A +A G
Sbjct: 423 EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAG 482
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTH-LGALDLGKCTHGSLIRNISALNVIV 270
E K+F ++ E +P E S+++ACT +++ GK H I+ + V
Sbjct: 483 ETEEAAKIFHQLTREGI-KPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCV 541
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+SL+ +Y K G +E +F+ ++ ++++ MISG A HGQ K+AL +F EM + L
Sbjct: 542 SSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNL 601
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
E D + ++GV+SAC+HAGLV +G F+ M ++ I PT++HY C++DL RAGMLG+A+
Sbjct: 602 EVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAM 661
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
++I MP VWR +L+AS+VH N+E+G++AA+ + + H + YVLLSN+YA A
Sbjct: 662 DIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAG 721
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W++ +R M + + + PG+S +EV K Y F++ D SHP D+IY + ++ +L+
Sbjct: 722 NWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLR 781
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD + V D+++++K L HS++LAIAF LI P++I +NLR+C DCH+
Sbjct: 782 DVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHS 841
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ KL+S++ +R I+VRD RFH FK G CSC DYW
Sbjct: 842 FIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 185/383 (48%), Gaps = 22/383 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++VH +K G + ++LV + G++ +F ++ + +N+L+ G+
Sbjct: 122 EQVHCQCVKCGLVHHLSVGNSLVDM--YTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYS 179
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ L+ M G PD +T + A A A+ GMQIH V K+GFE +
Sbjct: 180 WNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERL 239
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLI+M K + A +F M+ K SW+++IA H NG E + F M
Sbjct: 240 VCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG 299
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P + SV+ +C L L L + H +++ + N V T+L+ KC ++
Sbjct: 300 A-KPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDA 358
Query: 288 LCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
LF +M + ++++ MISG +G +A+++FS M REG++P+ Y +L+ H
Sbjct: 359 FSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QH 417
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-W 405
A ++E + + +K Y +V ++D + G + +A+++ + I+ DV+ W
Sbjct: 418 AVFISE--IHAEVIKTNYEKSSSVG--TALLDAFVKIGNISDAVKVFE--LIETKDVIAW 471
Query: 406 RSLLS----------ASKVHHNL 418
++L+ A+K+ H L
Sbjct: 472 SAMLAGYAQAGETEEAAKIFHQL 494
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 163/353 (46%), Gaps = 6/353 (1%)
Query: 62 NPFCASNLVATCALSHWGSMD--YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
NP S++VA A + D +A +F Q N L+ + + + +EAL L+
Sbjct: 31 NPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLF 90
Query: 120 NEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
++ G+ PD++T + CA G Q+H K G L V NSL++MY K
Sbjct: 91 VSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKT 150
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
V +F +M + V SW++++ ++ N + +LF M E +RP+ + +V
Sbjct: 151 GNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEG-YRPDYYTVSTV 209
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
++A + GA+ +G H +++ +V SLI M K G L +F M +K
Sbjct: 210 IAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDS 269
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++++ MI+G ++GQ EA F+ M G +P + V+ +C A L GL+
Sbjct: 270 VSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLKELGLVRVLH 327
Query: 360 MKLEYRIVPTVQHY-GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
K + T Q+ ++ + + + +A L M Q+ V W +++S
Sbjct: 328 CKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISG 380
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 334/603 (55%), Gaps = 34/603 (5%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCA------------------ 74
T++++C + L++ KKVH H+ GF F + L+ A
Sbjct: 75 TLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPER 134
Query: 75 -LSHW----------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
L W G + A S+F ++ E F + +I G+V+ EAL L+ M
Sbjct: 135 DLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMK 194
Query: 124 ERGVEPDN-FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
N FT + A A + L+ G +IHG++ + G + D V ++L +MYGKC +
Sbjct: 195 RSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSI 254
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E A IF +M + + +W+A+I + +G E LF ++ RP E VL+A
Sbjct: 255 EEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGI-RPNEFTFSGVLNA 313
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C + + +LGK HG + R ++L+ MY KCG + +F+ ++
Sbjct: 314 CANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSW 373
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I+G A +GQ EA+ F +++ G +PD + +VGVLSAC+HAGLV++GL F +K
Sbjct: 374 TSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKE 433
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y + T HY C++DL+ R+G EA +I M ++ + +W SLL ++H NL++ +
Sbjct: 434 QYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQ 493
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
AA+ LF+I +P+ YV L+N+YA A W +VAKIR M +G+ + PG S + + R V
Sbjct: 494 RAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDV 553
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
+ F+ D SHP I E + ++ ++K EG+ PD + VL DV++++K + L HS+KLA
Sbjct: 554 HVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLA 613
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+AF +I +G+PI++ +NLR C DCHT K IS I R+IIVRD RFH F+DG CSCR
Sbjct: 614 VAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCR 673
Query: 603 DYW 605
DYW
Sbjct: 674 DYW 676
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 141/279 (50%), Gaps = 35/279 (12%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
F+ I ++ +EAL + +++ +P + L ++C K + L++G ++H H+
Sbjct: 42 FDEAIHILCQQNRLKEALQILHQI----DKPSASVYSTLIQSCIKSRLLQQGKKVHQHIK 97
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
GF LF+ N L+ MY KC+ + + +F +M ++ + SW+ +I+ +A GL E
Sbjct: 98 LSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKS 157
Query: 219 LFGEM--NNEKCW-----------RPEESI------------------LVSVLSACTHLG 247
LF +M + W RP E++ + S L+A +
Sbjct: 158 LFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVP 217
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L +GK HG ++R + +V ++L DMY KCG +E+ +F M D+ +T++ MI
Sbjct: 218 CLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMID 277
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
G+ KE +F+++LR G+ P++ + GVL+AC++
Sbjct: 278 RYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 320/571 (56%), Gaps = 19/571 (3%)
Query: 45 EEFKKVHAHVLKWGFF-WNPFCASN----LVATCALSH--WGSMDYACSIFRQIDEPGAF 97
F ++HAH+L+ G ++P ++ L A SH +D+ + + P F
Sbjct: 50 RRFIQLHAHLLRTGLLIFSPVTTTSAFLSLAAVSLPSHRALAVLDHHLTTPHYL--PSTF 107
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA-CAKLQALKEGMQIHGH 156
N+++R + L + RG + FT L K C+ L Q+H +
Sbjct: 108 QCNSILRALSDPSDALRFLCRVRALGRRG---NAFTLAILLKPRCS----LAHARQLHAN 160
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V G D + SL+ Y + A +F +M + +W+ +I +A N +
Sbjct: 161 VVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTKDA 220
Query: 217 LKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
LKLF EM + P++ + +L AC+ LGALD G+ + + V SLI
Sbjct: 221 LKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGGELKVRNSLI 280
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY++CGC++K +F K +T++ MISGLA +G G +A+S+F EM+R + PD+
Sbjct: 281 TMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDVAPDEQ 340
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+ GVLSACSH+GLV+EG FD M+ EY + P V+HYGC+VDLMGRAG+L EA E + +
Sbjct: 341 TFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYEFVTN 400
Query: 396 -MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
M + + +WR+LL A ++H ++++GE NL ++ + DYVLL N YA W
Sbjct: 401 EMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAVGEWSK 460
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V++IR M +G+ +PG + VE V++F++ D +HP IYE + ++ QL+ GY
Sbjct: 461 VSEIRKLMQEEGIQTTPGCTTVEHNGTVHEFIADDDAHPRKVEIYENLSEIYKQLRIAGY 520
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P++S L D+D + K L HS+KLAIAFAL+ Q PIR+A+NLR+C DCH +TK+
Sbjct: 521 VPNVSSELHDLDSEGKESALTYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNFTKM 580
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S IY R +IVRDR RFH F+ G CSC DYW
Sbjct: 581 FSAIYRRIVIVRDRTRFHHFQGGKCSCNDYW 611
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/579 (35%), Positives = 341/579 (58%), Gaps = 12/579 (2%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK C L E ++H +K GF W + + S G + A +F ++
Sbjct: 110 TSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDM--YSKCGRIGMAEQVFNKMP 167
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N +I G E ++L L+ M +G PD FTF + KAC L A++ G Q
Sbjct: 168 FRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQ 227
Query: 153 IHGHVFKVGFECDL--FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
IH + GF + + ++++++Y KC + A +F +++QK++ SWSA+I A
Sbjct: 228 IHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQE 287
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G E + LF ++ E + +L ++ L ++ GK H +++ S L++ V
Sbjct: 288 GNLLEAMDLFRQLR-ESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISV 346
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
S+IDMY+KCG E+ LF M + ++++VMI+G HG G++A+ +F+ M +G+
Sbjct: 347 ANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGI 406
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
E D+V Y+ +LSACSH+GL+ E F R+ +++ P ++HY C+VD++GRAG L EA
Sbjct: 407 ELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAK 466
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
LI++M ++ N+ +W++LLSA +VH NLEIG + LF++++ +P +YV++SN+YA A
Sbjct: 467 NLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAG 526
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W + ++R + +KGL + G S VE+ ++++ F D +HP + I+EM+ +ME ++K
Sbjct: 527 YWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVK 586
Query: 511 FE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI---HLSQGSPIRIARNLRMCN 566
E GY+ + L DV+E+ K E L+ HS+KLAI AL+ +G IR+ +NLR+C
Sbjct: 587 EEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCG 646
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + K +S I ++ +VRD RFHRF+DG CSC DYW
Sbjct: 647 DCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 195/398 (48%), Gaps = 24/398 (6%)
Query: 30 KEQECLTILKTC-KN--LEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDY 83
+ Q +L+ C KN ++ +VHA + GF ++ ++L+ C+ +D
Sbjct: 3 ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCS-----RVDL 57
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
ACS+F ++ E + L+ G+++E + +L L EM GV+P+ FTF KAC
Sbjct: 58 ACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGA 117
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L ++ GMQIHG K GFE V N+ I+MY KC ++ A +F +M +++ SW+A+
Sbjct: 118 LGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAM 177
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN- 262
IA H G + L LF M + P+E S L AC LGA+ G H SLI
Sbjct: 178 IAGHTHEGNGRKSLVLFQRMQGQG-EVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236
Query: 263 --ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
IS N+I ++++D+Y KCG L + +F + K +++S +I G A G EA+
Sbjct: 237 FPISIRNIIA-SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMD 295
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGCVV 377
+F ++ D V ++ + LV +G +M VP+ + ++
Sbjct: 296 LFRQLRESVSNVDGFVLSIMMGVFADLALVEQG----KQMHCYILKVPSGLDISVANSII 351
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
D+ + G+ EA L M + +N V W +++ H
Sbjct: 352 DMYLKCGLTEEAERLFSEMQV-RNVVSWTVMITGYGKH 388
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/549 (37%), Positives = 313/549 (57%), Gaps = 32/549 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F QI +NT+I G+ ++ + +A +FE D FT+ A+ A +
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQA----RRLFEESPVRDVFTWTAMVYAYVQ 262
Query: 144 LQALKEGMQI------------------HGHVFKVGFECDLFVQNSLINM-------YGK 178
L E ++ + ++ +LF + N+ G
Sbjct: 263 DGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGY 322
Query: 179 CEKVEFASA--IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
C+ + A A +F M Q+ SW+AIIA +A NGL+ E + + EM + S
Sbjct: 323 CQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDG-ESLNRSTF 381
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
LSAC + AL+LGK HG ++R +V +L+ MY KCGC+++ +F+ +
Sbjct: 382 CCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQH 441
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K ++++ M++G A HG G++AL++F M+ G++PD++ VGVLSACSH GL + G
Sbjct: 442 KDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEY 501
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M +Y I P +HY C++DL+GRAG L EA LI++MP + + W +LL AS++H
Sbjct: 502 FHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHG 561
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N+E+GE AA+ +F++ H+ YVLLSN+YA + RW DV+K+R +M G+ ++PG+S V
Sbjct: 562 NMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWV 621
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
EV K++ F D HP IY + +++ ++K EGY VL DV+E+EK+ LK
Sbjct: 622 EVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKY 681
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF ++ + G PIR+ +NLR+C DCH K IS I R IIVRD R+H F +
Sbjct: 682 HSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSE 741
Query: 597 GTCSCRDYW 605
G CSCRDYW
Sbjct: 742 GICSCRDYW 750
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 144/336 (42%), Gaps = 33/336 (9%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G D A +F + + +N +I G+++ +F L ++F++ D F++ +
Sbjct: 47 GHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFS----LARDLFDKMPHKDLFSWNLML 102
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A+ + L++ + F E D+ N++++ Y + V+ A +F +M K+
Sbjct: 103 TGYARNRRLRDARML----FDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSI 158
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+ ++AA+ +G E +LF ++ W L +C L + + G
Sbjct: 159 SWNGLLAAYVRSGRLEEARRLFESKSD---WE---------LISCNCLMGGYVKRNMLGD 206
Query: 259 ---LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
L I ++I ++I Y + G L + LF + T++ M+ G
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGML 266
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA +F EM ++ ++ Y +++ + ++ G F+ M P + +
Sbjct: 267 DEARRVFDEMPQK----REMSYNVMIAGYAQYKRMDMGRELFEEMPF-----PNIGSWNI 317
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++ + G L +A L MP Q++ V W ++++
Sbjct: 318 MISGYCQNGDLAQARNLFDMMP-QRDSVSWAAIIAG 352
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 29/199 (14%)
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T I +++ G + LC+F M + ++Y+ MISG + + A +F +M + L
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLF 96
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+++ G + + + + FD M + V + ++ R+G + EA +
Sbjct: 97 SWNLMLTGY----ARNRRLRDARMLFDSMPEK-----DVVSWNAMLSGYVRSGHVDEARD 147
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS-------- 443
+ MP +N + W LL+A LE A+ LF+ SD+ L+S
Sbjct: 148 VFDRMP-HKNSISWNGLLAAYVRSGRLE----EARRLFE----SKSDWELISCNCLMGGY 198
Query: 444 ---NMYARAQRWYDVAKIR 459
NM A++ +D +R
Sbjct: 199 VKRNMLGDARQLFDQIPVR 217
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 339/573 (59%), Gaps = 15/573 (2%)
Query: 37 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L +E K++H VLK GF + F S+LV+ S G ++ +F ++++
Sbjct: 120 VLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSM--YSKCGEIELCRKVFDRMED 177
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+LI G+ + E E AL EMFE E D+F++ L +K L+
Sbjct: 178 KDVVSWNSLIDGYARCGEIELAL----EMFEEMPEKDSFSWTILIDGLSKSGKLEAARD- 232
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
VF + N++IN Y K A +F QM ++S+ +W+++I + N +
Sbjct: 233 ---VFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQF 289
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
++ LKLF M E P + ++ +SA + + +L G+ H ++++ + ++ T
Sbjct: 290 TKALKLFEVMLREDI-SPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTL 348
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI+MY KCG ++ L +FR + K ++ +I GL MHG ++ L +F EM R GL+P
Sbjct: 349 LIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPH 408
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++GVL+ACSHAG + F M +Y I P+++HYGC++D++ RAG L EA + I
Sbjct: 409 AITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTI 468
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ MPI+ N V+W SLLS S+ H N+ +GE AA++L + YV+LSNMYA A W
Sbjct: 469 ERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWE 528
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
V ++R M KG+ + PG S +E +++F+ D+SHP + IY + +M+ +L G
Sbjct: 529 KVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAG 588
Query: 514 YSPDISQVLRDVDED-EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
+ PD +QVL ++ED EK L+ HS++LAIAF L+++ GSPIRI +NLR+CNDCH T
Sbjct: 589 HIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVT 648
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KL+S IY REII+RD RFH FK G+CSC+D+W
Sbjct: 649 KLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 200/387 (51%), Gaps = 22/387 (5%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C E ++HA +K +P +S L+A A ++ YA S+F I EP
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+N LI+ +++ +A+ L+ ++ V PD+FT P + K CA+L AL+EG QIHG V
Sbjct: 82 SWNLLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLV 140
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K+GF D FV +SL++MY KC ++E +F +M+ K V SW+++I +A G L
Sbjct: 141 LKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELAL 200
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL-IRNISALNVIVETSLID 276
++F EM + + +IL+ LS G L+ + + IRN + N ++I+
Sbjct: 201 EMFEEMPEKDSF--SWTILIDGLSKS---GKLEAARDVFDRMPIRNSVSWN-----AMIN 250
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y+K G LF M ++ +T++ MI+G + Q +AL +F MLRE + P+
Sbjct: 251 GYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTT 310
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC----VVDLMGRAGMLGEALEL 392
+G +SA S G+V+ G R Y + + G ++++ + G + AL +
Sbjct: 311 ILGAVSAAS--GMVSLGT---GRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRV 365
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLE 419
+S+P ++ W S++ +H +E
Sbjct: 366 FRSIP-KKKLGHWTSVIVGLGMHGLVE 391
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/589 (36%), Positives = 340/589 (57%), Gaps = 8/589 (1%)
Query: 21 KGPELNLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
+G E R +++L C + L ++VHA L+ G + + A
Sbjct: 109 QGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGL--DELVNVSTAVLDAYCK 166
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G+++ A ++F + + +N +I G+ EA+ L+ M + GV+ + + A
Sbjct: 167 CGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAA 226
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKS 196
+AC +L L E ++H + +VG ++ V N+LI Y KC++ + A+ +F ++ ++K+
Sbjct: 227 LQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKT 286
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+A+I N + +LF M E RP+ LVSV+ A + + H
Sbjct: 287 RISWNAMILGFTQNECPEDAERLFARMQLENV-RPDSFTLVSVIPAVADISDPLQARWIH 345
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
G IR+ +V V T+LIDMY KCG + LF D+ +T++ MI G HG G+
Sbjct: 346 GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQ 405
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
A+ +F EM G P++ ++ VL+ACSHAGLV+EG F MK +Y + P ++HYG +
Sbjct: 406 AAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTM 465
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GRAG L EA I++MPI+ V+ ++L A K+H N+E+ E +A+ +F++
Sbjct: 466 VDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEG 525
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+VLL+N+YA A W DVA++RT M KGL ++PG+S++++ +V+ F S +H
Sbjct: 526 VYHVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAK 585
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
+IY + ++ ++K GY PD + DV++D K + L HS+KLAIA+ LI + G+ I
Sbjct: 586 DIYARLAKLIEEIKDMGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTI 644
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+I +NLR+CNDCH TKLIS++ REII+RD +RFH FKDG CSC DYW
Sbjct: 645 QIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 1/221 (0%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
TF AL K CA L G +H + G + +L NMY KC + A +F +M
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDL 251
+ +W+A++A +A NGL S ++ M E+ RP+ LVSVL AC AL
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
+ H +R V V T+++D Y KCG +E +F M + ++++ MI G A
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+G EA+++F M++EG++ D + L AC G ++E
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDE 238
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 328/577 (56%), Gaps = 20/577 (3%)
Query: 37 ILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
ILK+C +L +++H HV++ G PF + L++ G ++ A +F +
Sbjct: 56 ILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISM--YCKCGLVEDARKVFEENPH 113
Query: 94 PGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N LI G+ + +A F++ M E GV D+ T L C + L G
Sbjct: 114 SSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGR 173
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+HG K G ++ V NS I MY KC VE +F +M K + +W+A+I+ ++ NG
Sbjct: 174 SLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNG 233
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + L+LF +M + P+ LVSVLS+C HLGA +G+ + N A NV +
Sbjct: 234 LAYDVLELFEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLS 292
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI MY +CG L K +F +M K ++++ MI MHG G+ L++F +M++ G+
Sbjct: 293 NALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIR 352
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V+V VLSACSH+GL ++GL F MK EY++ P +HY C+VDL+GRAG L EA+E
Sbjct: 353 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME 412
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I SMP++ + VW +LL A K+H N+++ E+A + + + YVL+SN+Y+ ++
Sbjct: 413 FIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKN 472
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
+ +IR M + + PG+S VE KV+ F++ DRSH + ++ M+ ++E
Sbjct: 473 QEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELE----- 527
Query: 512 EGYSPDISQVLRDVDEDEKRE---RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+ ++ ++D D E + HS++LAIAF +++ G+ I + +NLR+C DC
Sbjct: 528 ----TSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDC 583
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H + KL+S I +R +VRD RFH FKDG CSC+DYW
Sbjct: 584 HVFIKLVSKIVDRRFVVRDASRFHYFKDGVCSCKDYW 620
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 160/325 (49%), Gaps = 5/325 (1%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +R + F E++ LY M G PD F+FP + K+CA L G Q+H HV
Sbjct: 18 WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV--ASWSAIIAAHASNGLWSEC 216
+ G E + FV +LI+MY KC VE A +F++ S ++A+I+ + +N S+
Sbjct: 78 RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDA 137
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+F M E + ++ ++ CT L LG+ HG ++ + V V S I
Sbjct: 138 AFMFRRM-KETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY+KCG +E G LF M K +T++ +ISG + +G + L +F +M G+ PD
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V VLS+C+H G G + ++ P V ++ + R G L +A + M
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEAN-GFAPNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIG 421
P+ ++ V W +++ +H E G
Sbjct: 316 PV-KSLVSWTAMIGCYGMHGMGETG 339
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 333/575 (57%), Gaps = 4/575 (0%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
Q + + +C ++ +HA V+K + + F LV+ G + A +F ++
Sbjct: 123 QSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSM--YFKLGYDEDAQRLFDEM 180
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEG 150
+N+L+ G L + M E G +P+ T ++ ACA + AL EG
Sbjct: 181 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 240
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+HG V K+G V NSLINMYGK ++ AS +F++M +S+ SW++++ H N
Sbjct: 241 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 300
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + + LF M P+++ +V++L ACT G + H + R ++I+
Sbjct: 301 GYAEKGMDLFNLMKRAGI-NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIII 359
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+++Y K G L +F + D+ ++ ++ M++G A+H G+EA+ +F M++EG+
Sbjct: 360 ATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 419
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
E D V + +LSACSH+GLV EG F+ M YR+ P + HY C+VDL+GR+G L +A
Sbjct: 420 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 479
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
ELI+SMP++ + VW +LL A +V+ N+E+G+ A+ L ++ +Y++LSN+Y+ A
Sbjct: 480 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 539
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W D +K+R M + L ++PG S +E K+++FV D+ HP D I+ + ++ +++
Sbjct: 540 LWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIR 599
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
G +P VL D+DE+ K + + HS+KLAIAF L+ G P+ I +NLR+C DCH+
Sbjct: 600 EAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHS 659
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K S++ +R II+RD KRFH F DG CSCRDYW
Sbjct: 660 TAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/602 (35%), Positives = 334/602 (55%), Gaps = 38/602 (6%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I + C+ L +++HA G + F A++L+ A + G A +F +I +
Sbjct: 51 IFRACQALPLLRQLHAFAATSGAAADRFTANHLLL--AYADLGDFPTARGLFERIPKRNV 108
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFER------------------------------- 125
+N LI G+VK + E A L++EM R
Sbjct: 109 MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 168
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G++PD + +LF+ CA L+ + G Q+H +V + G + D+ V +SL +MY +C +
Sbjct: 169 GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 228
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
A + + ++ S + I+ NG L+ F M VS +++C+
Sbjct: 229 EAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGV-EANAVTFVSAVTSCSD 287
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL--EKGLCLFRMMADKCQLTYS 303
L AL G+ H I+ V V TSL+ MY +CGCL + +CL D + S
Sbjct: 288 LAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTD--LVLCS 345
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MIS HG G++A+ +F +M+ G EP++V ++ +L ACSH+GL +EG+ CF+ M
Sbjct: 346 AMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKT 405
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y + P+V+HY C+VDL+GR+G L EA +LI SMP+Q + V+W++LLSA K ++ E
Sbjct: 406 YGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAER 465
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
A+ + +++ H + YVLLSN+ A + RW DV+K+R M + + + PG S VE+ +++
Sbjct: 466 IAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIH 525
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
+F + D SH I E + +M +++ GY+PD+S V D++++EK L HS+KLAI
Sbjct: 526 QFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAI 585
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AFA + L +G PIR+ +NLR+C+DCH KL+S + REI+VRD RFH FKDG CSC D
Sbjct: 586 AFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGD 645
Query: 604 YW 605
YW
Sbjct: 646 YW 647
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 142/355 (40%), Gaps = 36/355 (10%)
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
F G+ + F +F+AC L L+ Q+H G D F N L+ Y
Sbjct: 37 FREGLWSEPGLFSHIFRACQALPLLR---QLHAFAATSGAAADRFTANHLLLAYADLGDF 93
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCW----------- 229
A +F+++ +++V SW+ +I + NG KLF EM N W
Sbjct: 94 PTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSG 153
Query: 230 -----------------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+P+E L S+ C L + G+ H ++R+ ++ V +
Sbjct: 154 LNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGS 213
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL MY++CG L G R + ++ + ISG +G + AL F M G+E
Sbjct: 214 SLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEA 273
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V +V +++CS + +G + ++ + V +V + R G LG++ +
Sbjct: 274 NAVTFVSAVTSCSDLAALAQGQQ-IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERV 332
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ D+V S + ++ H + P++ L+ +YA
Sbjct: 333 C--LEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYA 385
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 329/573 (57%), Gaps = 8/573 (1%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I++ +++ ++VHAH++ + + + L+ + ++ Y +F + P
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTSYGRSRSLLTKLITLACSAR--AIAYTHLLFLSVPLPDD 72
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F FN++I+ K + Y M V P N+TF ++ K+CA L ALK G +H H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCH 132
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
GF D +VQ +L+ Y KC +E A +F +M +KSV +W+++++ NGL +
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDA 192
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+++F +M E + P+ + VS+LSAC GA+ LG H ++ +NV + T+LI+
Sbjct: 193 IRVFYQMR-ESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALIN 251
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDV 335
+Y +CG + K +F M + ++ MIS HG GK+A+ +F++M + G P++V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNV 311
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+V VLSAC+HAGLV +G + RM YR++P V+H+ C+VD++GRAG L EA IQ
Sbjct: 312 TFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQQ 371
Query: 396 MPIQQN---DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ N +W ++L A K+H N ++G AK L + +P +V+LSN+YA + +
Sbjct: 372 LDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGKT 431
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+V+ IR M L + G+S++EV K Y F D SH IY + + + K
Sbjct: 432 DEVSHIRDRMMRNNLRKQVGYSIIEVENKTYLFSMGDESHQETGEIYRYLETLISRCKEI 491
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+P +V+ V+E+EK L+ HS+KLA+AF L+ + S I + +NLR+C DCH+
Sbjct: 492 GYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDSAITVVKNLRICEDCHSAF 550
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS++ R+IIVRD+ RFH F++G+CSC DYW
Sbjct: 551 KYISIVSNRQIIVRDKLRFHHFQNGSCSCLDYW 583
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 156/307 (50%), Gaps = 12/307 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++K+C +L K VH H + GF + + + LV S G M+ A +F ++
Sbjct: 112 SVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTF--YSKCGDMEAARQVFDRMP 169
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N+L+ GF + E+A+ ++ +M E G EPD+ TF +L ACA+ A+ G
Sbjct: 170 EKSVVAWNSLVSGFEQNGLAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSW 229
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H ++ G + ++ + +LIN+Y +C V A +F +M + +VA+W+A+I+A+ ++G
Sbjct: 230 VHQYIVSEGLDVNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVE 271
+ + LF +M ++ P V+VLSAC H G ++ G+ + + + + V
Sbjct: 290 GKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHH 349
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLT----YSVMISGLAMHGQGKEALSIFSEMLR 327
++DM + G L++ + + T ++ M+ MH + I ++
Sbjct: 350 VCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLI- 408
Query: 328 EGLEPDD 334
LEP++
Sbjct: 409 -ALEPEN 414
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/568 (36%), Positives = 335/568 (58%), Gaps = 13/568 (2%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLV----ATCALSHWGSMDYACSIFRQIDEPGAFD 98
NL +VHA+ +K G N ++L+ C + + GS F + E
Sbjct: 367 NLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA------FEYMPEKDLIS 420
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ T+I G+ + +AL L ++ ++ D ++ AC+ L++ K +IHG+V
Sbjct: 421 WTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVL 480
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K G D+ +QN+++N+YG+ V++A +F+ ++ K + SW+++I NGL E L+
Sbjct: 481 KGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALE 539
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
LF + E P+ LVSVL A L +L GK HG LIR L ++ SL+DMY
Sbjct: 540 LFNSLI-ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMY 598
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+CG +E +F + + + ++ MI+ MHG GK+A+ +FS+M E + PD + ++
Sbjct: 599 ARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFL 658
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L ACSH+GLV EG F+ MK EY++ P +HY C+VDL+ R+ L EA +++MPI
Sbjct: 659 ALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPI 718
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ + VW +LL A ++H N ++GE+AAK L Q+N+ + +YVL+SN +A RW DV ++
Sbjct: 719 EPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEV 778
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPD 517
R+ M L + PG S +EV K++ F+++D+SHP +NIY + Q LK + GY
Sbjct: 779 RSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQ 838
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
V DV E+EK + L GHS++LA+ + L+ S+G+ +RI +NLR+C+DCH + K+ S
Sbjct: 839 TKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASE 898
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +R ++VRD RFH F+ G CSC D+W
Sbjct: 899 ISQRTLVVRDASRFHHFERGLCSCGDFW 926
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 192/409 (46%), Gaps = 14/409 (3%)
Query: 9 QSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLK-WGFFWNPFCAS 67
QSL + P L+ + L + + K L + +++HAH LK + + F +
Sbjct: 27 QSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDT 86
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
V GS A +F ++ E F +N +I V + EA+ LY EM GV
Sbjct: 87 KFVHM--YGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGV 144
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
D FTFP + KAC + + G +IHG K G+ +FV N+LI MY KC + A
Sbjct: 145 SLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARV 204
Query: 188 IFKQ--MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F M++ SW++II+AH G E L LF M E VS L AC
Sbjct: 205 LFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRM-QEVGVESNTYTFVSALQACEG 263
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ +G+ H ++++ +V V +LI MY CG +E +F+ M K ++++ +
Sbjct: 264 PTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTL 323
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
+SG+ + +A++ F +M G +PD V + +++A + + G+ +++
Sbjct: 324 LSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGME-VHAYAIKHG 382
Query: 366 IVPTVQHYGCVVDLMGR---AGMLGEALELIQSMPIQQNDVVWRSLLSA 411
I + ++D+ G+ +G A E MP +++ + W ++++
Sbjct: 383 IDSNMHIGNSLIDMYGKCCCVKYMGSAFEY---MP-EKDLISWTTIIAG 427
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 193/373 (51%), Gaps = 16/373 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +HA +LK F + + ++ L+A A + G M+ A +F+ + +NTL+ G V
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYA--NCGQMEDAERVFKSMLFKDCVSWNTLLSGMV 328
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ + +A+ + +M + G +PD + + A + L GM++H + K G + ++
Sbjct: 329 QNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMH 388
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+ NSLI+MYGKC V++ + F+ M +K + SW+ IIA +A N + L L ++ EK
Sbjct: 389 IGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEK 448
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ ++ S+L AC+ L + L K HG +++ A +++++ +++++Y + ++
Sbjct: 449 -MDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYA 506
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-- 345
+F + K ++++ MI+ +G EAL +F+ ++ +EPD + V VL A +
Sbjct: 507 RHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAAL 566
Query: 346 ---HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
G G L LE I + +VD+ R G + A + + Q++
Sbjct: 567 SSLKKGKEIHGFLIRKGFFLEGLIANS------LVDMYARCGTMENARNIFNYVK-QRDL 619
Query: 403 VVWRSLLSASKVH 415
++W S+++A+ +H
Sbjct: 620 ILWTSMINANGMH 632
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 205/419 (48%), Gaps = 14/419 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ--I 91
+LK C +E + ++H +K G+ F + L+A A G + A +F +
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYA--KCGDLGGARVLFDSGLM 211
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
++ +N++I V E E EAL L+ M E GVE + +TF + +AC +K G
Sbjct: 212 EKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGR 271
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH + K D++V N+LI MY C ++E A +FK M K SW+ +++ N
Sbjct: 272 GIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQND 331
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
++S+ + F +M + +P++ ++++++A L G H I++ N+ +
Sbjct: 332 MYSDAINHFQDMQDSG-QKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIG 390
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
SLIDMY KC C++ F M +K ++++ +I+G A + +AL++ ++ E ++
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D ++ +L ACS GL +E L+ + + + +V++ G ++ A
Sbjct: 451 VDPMMIGSILLACS--GLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARH 508
Query: 392 LIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ +S I D+V W S+++ VH+ L I + N + P L+S +YA A
Sbjct: 509 VFES--INSKDIVSWTSMITCC-VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAA 564
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 313/519 (60%), Gaps = 3/519 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F I E +NTLI F + + EEAL L+ +M +G+ PD+++ + AC +
Sbjct: 360 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF 419
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G QIHG++ K G D FVQN+LI+MY KC V A+ +F+++ +KS+ +W+++I
Sbjct: 420 SQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICG 478
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NG E + LF +M C + ++ +SV+ AC+HLG L+ GK H LI
Sbjct: 479 FSQNGYSVEAITLFDQMY-MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRK 537
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ ++T+L DMY KCG L+ +F M+++ +++SVMI+G MHGQ +S+F++ML
Sbjct: 538 DSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQML 597
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G++P+D+ ++ +LSACSHAG V EG L F+ M E+ + P H+ C+VDL+ RAG L
Sbjct: 598 GSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDL 656
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
A ++I S+P N +W +LL+ ++H ++I + KNL +++ Y LLSN+Y
Sbjct: 657 NGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIY 716
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A W K+R+ M SKGL + PG+S +E+ +K+Y+F D SH +IY +
Sbjct: 717 AEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFR 776
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+ + Y + + + K + HS+KLAIAF +I+ G+ +RI++NLR+C
Sbjct: 777 SLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCR 836
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH++ K+ S I REII+RD RFH F++G+CSC DYW
Sbjct: 837 DCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 169/320 (52%), Gaps = 4/320 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+ + + C ++HAH+ G +P ++ L+ + A G + + +F +P
Sbjct: 5 MPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYA--QIGIFESSKRVFDTFPKP 62
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+F + LI+ +V FEEA+ LY+EM ++ + NF FP++ KAC+ L G ++
Sbjct: 63 DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKV 122
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG V K GFE D V+ SL+ MYG+ ++ A F M + V +WS+I+ NG
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQA 182
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
SE L +F +M +E P+ ++SV AC+ LG+L LG+ HG ++R N + S
Sbjct: 183 SEGLDMFSQMISEAV-EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNS 241
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI MY K G L LF + + ++ MIS G +EAL++F++M +EP+
Sbjct: 242 LIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPN 301
Query: 334 DVVYVGVLSACSHAGLVNEG 353
V VGVL AC+ G V EG
Sbjct: 302 QVTMVGVLCACARLGRVKEG 321
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 186/378 (49%), Gaps = 10/378 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK C + KVH V+K GF + ++L+ C +D AC F +
Sbjct: 105 SVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLL--CMYGEMSCLDDACKAFDTMP 162
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+++++ FV+ + E L ++++M VEPD+ T ++ +AC++L +L+ G
Sbjct: 163 IRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRS 222
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG+V + E + + NSLI MYGK + A +F+ + + A W+ +I+ + +G
Sbjct: 223 VHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGC 282
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV-IVE 271
+ E L +F +M K P + +V VL AC LG + G+ HG +IR + +
Sbjct: 283 FQEALNVFAKMQEFK-MEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLG 341
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+++Y G L +F + +K L+++ +IS +GQ +EAL +F +M +GL
Sbjct: 342 PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLM 401
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD LSAC G + VQ+ ++D+ + G + A +
Sbjct: 402 PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANK 459
Query: 392 LIQSMPIQQNDVVWRSLL 409
+ + + +++ V W S++
Sbjct: 460 MFEKIK-EKSLVTWNSMI 476
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 121/277 (43%), Gaps = 5/277 (1%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ LF+ CA L Q+H H+F G LI Y + E + +F
Sbjct: 4 YMPLFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ W +I + G + E + L+ EM + + + SVL AC+ G L +G
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG +I+ + +VETSL+ MY + CL+ F M + + +S ++ +G
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
Q E L +FS+M+ E +EPD V + V ACS G + G + + I
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYV-VRREIESNASLN 239
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
++ + G+ G L A L +++P + W ++S
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVPCRMT-APWTPMIS 275
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 27 LRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+++ + L++++ C +L E+ K VH ++ +G + + + L T S G +
Sbjct: 500 VKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTAL--TDMYSKCGELQM 557
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ E ++ +I G+ + + L+N+M G++P++ TF + AC+
Sbjct: 558 AHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSH 617
Query: 144 LQALKEGMQIHGHVFKVGFE 163
A++EG + + G E
Sbjct: 618 AGAVEEGKLYFNSMSEFGVE 637
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 313/519 (60%), Gaps = 3/519 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F I E +NTLI F + + EEAL L+ +M +G+ PD+++ + AC +
Sbjct: 557 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF 616
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G QIHG++ K G D FVQN+LI+MY KC V A+ +F+++ +KS+ +W+++I
Sbjct: 617 SQLGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICG 675
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NG E + LF +M C + ++ +SV+ AC+HLG L+ GK H LI
Sbjct: 676 FSQNGYSVEAITLFDQMY-MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRK 734
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ ++T+L DMY KCG L+ +F M+++ +++SVMI+G MHGQ +S+F++ML
Sbjct: 735 DSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQML 794
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G++P+D+ ++ +LSACSHAG V EG L F+ M E+ + P H+ C+VDL+ RAG L
Sbjct: 795 GSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDL 853
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
A ++I S+P N +W +LL+ ++H ++I + KNL +++ Y LLSN+Y
Sbjct: 854 NGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIY 913
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A W K+R+ M SKGL + PG+S +E+ +K+Y+F D SH +IY +
Sbjct: 914 AEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFR 973
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+ + Y + + + K + HS+KLAIAF +I+ G+ +RI++NLR+C
Sbjct: 974 SLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCR 1033
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH++ K+ S I REII+RD RFH F++G+CSC DYW
Sbjct: 1034 DCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 1072
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 199/458 (43%), Gaps = 64/458 (13%)
Query: 16 PEEPPKGPELN----LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
P +PP L LT K C ++HAH+ G +P ++ L+
Sbjct: 329 PGDPPGEASAEYACFFTLNSSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIE 388
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM--------- 122
+ A G + + +F +P +F + LI+ +V FEEA+ LY+EM
Sbjct: 389 SYA--QIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQIS 446
Query: 123 ------------------------------------FERGVEPDNFTFPALFKACAKLQA 146
VEPD+ T ++ +AC++L +
Sbjct: 447 NFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGS 506
Query: 147 L--------KEGMQIHGHVFKVGFECDL-FVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
L KEG +HG V + + +L F+ +L+ +Y + +F+ + +K++
Sbjct: 507 LRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTI 566
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+ +I+ NG E L LF +M + P+ L S LSAC + LG HG
Sbjct: 567 LSWNTLISIFTRNGQPEEALLLFVQMQTQGLM-PDSYSLASSLSACGTISFSQLGAQIHG 625
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+I+ N V+ +LIDMY KCG + +F + +K +T++ MI G + +G E
Sbjct: 626 YIIKT-GNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVE 684
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A+++F +M ++ D + ++ V+ ACSH G + +G ++ + Y + +
Sbjct: 685 AITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKL-IMYGLRKDSYLDTALT 743
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
D+ + G L A + M +++ V W +++ +H
Sbjct: 744 DMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMH 780
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 27 LRLKEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+++ + L++++ C +L E+ K VH ++ +G + + + L T S G +
Sbjct: 697 VKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTAL--TDMYSKCGELQM 754
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ E ++ +I G+ + + L+N+M G++P++ TF + AC+
Sbjct: 755 AHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSH 814
Query: 144 LQALKEGMQIHGHVFKVGFE 163
A++EG + + G E
Sbjct: 815 AGAVEEGKLYFNSMSEFGVE 834
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 343/576 (59%), Gaps = 13/576 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
+IL+ C +L + K VH +++ G+ + ++ N+ A C G++ + +F
Sbjct: 380 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKC-----GNLLASQEVFS 434
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ + +N++I +++ F+EA+ L+ +M + V+PD+ T+ L +L L
Sbjct: 435 GMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXL 493
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G ++H + K+GF ++ V N+L++MY KC ++ + +F+ M + + +W+ IIA+
Sbjct: 494 GKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVH 553
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ + L++ M E P+ + ++S+L C+ L A GK HG + + +V
Sbjct: 554 SEDCNLGLRMISRMRTEGV-TPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 612
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V LI+MY KCG L +F++M K +T++ +IS M+G+GK+A+ F EM G
Sbjct: 613 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 672
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PD V +V ++ ACSH+GLV EGL F RMK +Y+I P ++HY CVVDL+ R+ +L +A
Sbjct: 673 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 732
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ I SMP++ + +W +LLSA ++ + EI + ++ + ++N YVL+SN+YA
Sbjct: 733 EDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAAL 792
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W V IR + ++GL + PG S +E+ KVY F + + ++ + +++ + +
Sbjct: 793 GKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLM 852
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
EGY ++ VL D+DEDEKR+ L GHS++LAIAF L++ G+P+++ +NLR+C DCH
Sbjct: 853 AKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCH 912
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T TK IS I +RE++VRD RFH FKDG CSC DYW
Sbjct: 913 TVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 247/512 (48%), Gaps = 40/512 (7%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP--G 95
L + + K+H+ ++ G + ++ L+A A H+ + S+FR + P
Sbjct: 82 LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYA--HFRDPTSSFSVFR-LASPSNN 138
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +N++IR F EAL LY+E ++PD +TFP++ ACA L + IH
Sbjct: 139 VYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHD 198
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
V +GF DL++ N+LI+MY + ++ A +F++M + V SW+++I+ + +NG W+E
Sbjct: 199 RVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNE 258
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+++ N P+ + SVL AC LG+++ G HG + + +VIV L+
Sbjct: 259 ALEIYYRFRNLGV-VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 317
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY K L G +F M + ++++ MI G + G +E++ +F EM+ + +PD +
Sbjct: 318 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLL 376
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+L AC H G + G D M Y T + ++++ + G L + E+
Sbjct: 377 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN--ILINMYAKCGNLLASQEVFS 434
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSD--YVLLSNMYARAQ 450
M ++ V W S+++ + + + A LF++ P YV+L +M +
Sbjct: 435 GMKC-KDSVSWNSMINVYIQNGSFD----EAMKLFKMMKTDVKPDSVTYVMLLSMSTQLG 489
Query: 451 RWYDVAKIRTEMASKGLNQSPGFS--LVEV---------ARKVYKFVSQDRSHPAWDNIY 499
++ ++A G N + S LV++ + KV++ + + R W+ I
Sbjct: 490 DLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM-KARDIITWNTII 548
Query: 500 -EMIH--------QMEWQLKFEGYSPDISQVL 522
+H +M +++ EG +PD++ +L
Sbjct: 549 ASCVHSEDCNLGLRMISRMRTEGVTPDMATML 580
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 186/383 (48%), Gaps = 18/383 (4%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQI 91
++L+ C L EE +H + K G + + L++ C + G +D IF ++
Sbjct: 280 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFN--GLID-GRRIFDKM 336
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
A +NT+I G+ + +EE++ L+ EM + +PD T ++ +AC L L+ G
Sbjct: 337 VLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGK 395
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H ++ G+ECD N LINMY KC + + +F M K SW+++I + NG
Sbjct: 396 YVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNG 455
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ E +KLF M + +P+ V +LS T LG L LGK H L + N++V
Sbjct: 456 SFDEAMKLFKMMKTDV--KPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVS 513
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+DMY KCG + L +F M + +T++ +I+ L + S M EG+
Sbjct: 514 NTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVT 573
Query: 332 PDDVVYVGVLSACSHAGLVNEGLL---CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
PD + +L CS +G C ++ LE VP ++++ + G L
Sbjct: 574 PDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD-VPVGN---VLIEMYSKCGSLRN 629
Query: 389 ALELIQSMPIQQNDVVWRSLLSA 411
+ ++ + M ++ V W +L+SA
Sbjct: 630 SFQVFKLMK-TKDVVTWTALISA 651
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 318/571 (55%), Gaps = 3/571 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT+ +L +VHA VL+ N F ++L+ S +D +F ++ E
Sbjct: 243 LTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDF--YSKCDCLDDMRRLFDEMPER 300
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N +I + L L+ EM + G + + + L + G QIH
Sbjct: 301 DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 360
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ +G + + N+LI+MY KC ++ A + F +KS SW+A+I + NG
Sbjct: 361 AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE 420
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+LF +M RP+ + S++ A + L + LG+ H LIR+ +V + L
Sbjct: 421 EALQLFSDMRRAGL-RPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 479
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCGCL++ L F M ++ ++++ +IS A +G+ K A+ +F ML G PD
Sbjct: 480 VDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDS 539
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V ++ VL+ACSH GL +E + F MK +Y I P +HY CV+D +GR G + +++
Sbjct: 540 VTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLV 599
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP + + ++W S+L + ++H N E+ +AA LF + + YV+LSN+YARA +W D
Sbjct: 600 EMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWED 659
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
A ++ M +G+ + G+S VE+ +K+Y F S D + P D I + + ++ ++ +GY
Sbjct: 660 AACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGY 719
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PDI+ L VD + K E LK HS++LAIAFAL++ G+PIRI +NL C DCH K+
Sbjct: 720 KPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKM 779
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I R+IIVRD +RFH FKDG CSC DYW
Sbjct: 780 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 7/363 (1%)
Query: 50 VHAHVLKWGFFWNPF-CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+H +K+G + F C + L A C G + A +F ++ + A +N ++ G K
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYC---KHGLLAAARRVFLEMHDKDAVTYNAMMMGCSK 213
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
E +AL L+ M G+ +FTF ++ A + L G Q+H V + ++FV
Sbjct: 214 EGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFV 273
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
NSL++ Y KC+ ++ +F +M ++ S++ IIAA+A N + L+LF EM
Sbjct: 274 NNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
R + ++LS L + +GK H L+ A ++ +LIDMY KCG L+
Sbjct: 334 DR-QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAK 392
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
F ++K ++++ +I+G +GQ +EAL +FS+M R GL PD + ++ A S
Sbjct: 393 SNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 452
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
++ G + + +V +VD+ + G L EAL MP ++N + W ++
Sbjct: 453 MIGLGRQLHSYL-IRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAV 510
Query: 409 LSA 411
+SA
Sbjct: 511 ISA 513
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++F N +++ Y + A +F ++ +W+ ++ AHA+ G S+ L LF M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 225 NEKCWRPEESILVSVLS--ACT----HLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
E P+ + +VL+ CT H A+ G TH V V +L+D Y
Sbjct: 133 GEGVI-PDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTH-----------VFVCNTLLDAY 180
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
K G L +F M DK +TY+ M+ G + G +AL +F+ M R G+ +
Sbjct: 181 CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY--GCVVDLMGRAGMLGEALELIQSM 396
+L+ AG+ + LL L R + + ++D + L + L M
Sbjct: 241 SILTVA--AGMAHL-LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 397 PIQQNDVVWRSLLSA 411
P ++++V + +++A
Sbjct: 298 P-ERDNVSYNVIIAA 311
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+NI +LN+I+ Y G L LF + T+++M+ A G+ +ALS
Sbjct: 72 KNIFSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALS 126
Query: 321 IFSEMLREGLEPDDVVYVGVLS 342
+F ML EG+ PD V VL+
Sbjct: 127 LFRAMLGEGVIPDRVTVTTVLN 148
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 333/575 (57%), Gaps = 12/575 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++K+C +L E K + LK GF + + L+ ALS MD A S+F ++
Sbjct: 300 SVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALM--VALSKCKEMDDALSLFSLME 357
Query: 93 E-PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + +I G ++ ++A+ L+++M GV+P++FT+ A+ +
Sbjct: 358 EGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----S 413
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H V K +E V +L++ Y K A +F+ ++ K + +WSA++A +A G
Sbjct: 414 EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSAC-THLGALDLGKCTHGSLIRNISALNVIV 270
E KLF ++ E +P E SV++AC + A + GK H I+ + V
Sbjct: 474 ETEEAAKLFHQLIKEGI-KPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
++L+ MY K G ++ +F+ ++ ++++ MISG + HGQ K+AL +F EM + +
Sbjct: 533 SSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNM 592
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D V ++GV++AC+HAGLV +G F+ M ++ I PT++HY C++DL RAGML +A+
Sbjct: 593 DVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAM 652
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+I MP VWR+LL A++VH N+E+GE+AA+ L + + YVLLSNMYA A
Sbjct: 653 GIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAG 712
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W + +R M + + + PG+S +EV K Y F++ D +HP + IY + ++ +LK
Sbjct: 713 NWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLK 772
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD V D+++++K L HS++LAIAF LI PI+I +NLR+C DCH
Sbjct: 773 DAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHN 832
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+TKL+S++ +R I+VRD RFH FKDG CSC DYW
Sbjct: 833 FTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 186/368 (50%), Gaps = 9/368 (2%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+VHA V+K GF ++L++ S G + A +F +++ +N++I G+V+
Sbjct: 215 QVHAMVVKHGFEEAIPVFNSLISL--YSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR 272
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+ E ++N+M GV+P + TF ++ K+CA L+ L + K GF D V
Sbjct: 273 NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+L+ KC++++ A ++F M++ K+V SW+A+I+ NG + + LF +M E
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P ++L+ + ++ H +I+ + V T+L+D YVK G
Sbjct: 393 V-KPNHFTYSAILTVHYPVFVSEM----HAEVIKTNYERSSSVGTALLDAYVKLGNTIDA 447
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ +F ++ K + +S M++G A G+ +EA +F ++++EG++P++ + V++AC+
Sbjct: 448 VKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASP 507
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
E F ++ R+ + +V + + G + A E+ + +++ V W S
Sbjct: 508 TAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNS 566
Query: 408 LLSASKVH 415
++S H
Sbjct: 567 MISGYSQH 574
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 128/248 (51%), Gaps = 1/248 (0%)
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ N L+ + ++ + +EAL L+ + ++PD T +F CA K G Q+H
Sbjct: 60 EHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQC 119
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K G + V SL++MY K E V +F +M +++V SW++++A ++ NGL+
Sbjct: 120 VKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVW 179
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
+LF +M E P + +V++A + G + +G H ++++ + V SLI +
Sbjct: 180 ELFCQMQYEGVL-PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISL 238
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y + G L +F M + +T++ MI+G +GQ E IF++M G++P + +
Sbjct: 239 YSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTF 298
Query: 338 VGVLSACS 345
V+ +C+
Sbjct: 299 ASVIKSCA 306
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/572 (37%), Positives = 332/572 (58%), Gaps = 7/572 (1%)
Query: 38 LKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LK+C LE FK VH LK + + + L+ S G + A F ++ +
Sbjct: 212 LKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKS--GEIAEAQQFFEEMPKD 269
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQALKEGMQI 153
++ +I + + + +EAL L+ M + V P+NFTF ++ +ACA L L G QI
Sbjct: 270 DLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQI 329
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H V KVG + ++FV N+L+++Y KC ++E + +F +K+ +W+ II + G
Sbjct: 330 HSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDG 389
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ L LF M +P E SVL A L AL+ G+ H I+ + + +V S
Sbjct: 390 EKALNLFSNMLGLDI-QPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANS 448
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG ++ F M + +++++ +I G ++HG G EAL++F M + +P+
Sbjct: 449 LIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPN 508
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ +VGVLSACS+AGL+++G F M +Y I P ++HY C+V L+GR+G EA++LI
Sbjct: 509 KLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLI 568
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+P Q + +VWR+LL A +H NL++G++ A+ + ++ + +VLLSNMYA A+RW
Sbjct: 569 GEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWD 628
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+VA +R M K + + PG S VE V+ F D SHP I+ M+ + + + G
Sbjct: 629 NVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAG 688
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y PD S VL DV++DEK L HS++LA+AF LI + G IRI +NLR+C DCH K
Sbjct: 689 YVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIK 748
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L+S I +REI++RD RFH F+ G CSC DYW
Sbjct: 749 LVSKIVQREIVIRDINRFHHFRQGVCSCGDYW 780
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 6/367 (1%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VHA+V K G + F + L+ A S G++D A +F I + ++ + +
Sbjct: 126 VHAYVYKLGHQADAFVGTALID--AYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
E++L L+ +M G P+NFT A K+C L+A K G +HG KV ++ DL+V
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
+L+ +Y K ++ A F++M + + WS +I+ +A + E L+LF M
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P SVL AC L L+LG H +++ NV V +L+D+Y KCG +E +
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVK 363
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF +K ++ ++ +I G G G++AL++FS ML ++P +V Y VL A +
Sbjct: 364 LFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVA 423
Query: 350 VNEGLLCFD-RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
+ G +K Y V + ++D+ + G + +A M +Q++V W +L
Sbjct: 424 LEPGRQIHSLTIKTMYNKDSVVAN--SLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNAL 480
Query: 409 LSASKVH 415
+ +H
Sbjct: 481 ICGYSIH 487
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 12/366 (3%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +H H+LK G + F + L+ T H+G ++ A +F ++ F TL +GF
Sbjct: 23 KSLHCHILKHGASLDLFAQNILLNTYV--HFGFLEDASKLFDEMPLTNTVSFVTLAQGFS 80
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +F+ A L +F G E + F F L K + + +H +V+K+G + D F
Sbjct: 81 RSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAF 140
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +LI+ Y C V+ A +F + K + SW+ ++A +A N + L LF +M
Sbjct: 141 VGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMG 200
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+RP + + L +C L A +GK HG ++ ++ V +L+++Y K G + +
Sbjct: 201 -YRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEA 259
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSH 346
F M + +S+MIS A + KEAL +F M + + P++ + VL AC+
Sbjct: 260 QQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACAS 319
Query: 347 AGLVNEG---LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
L+N G C ++ L+ + + ++D+ + G + +++L ++N+V
Sbjct: 320 LVLLNLGNQIHSCVLKVGLDSNVFVS----NALMDVYAKCGEIENSVKLFTG-STEKNEV 374
Query: 404 VWRSLL 409
W +++
Sbjct: 375 AWNTII 380
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 125/288 (43%), Gaps = 20/288 (6%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D+ ++ + + + + G +H H+ K G DLF QN L+N Y +E AS +F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+M + S+ + + + + +L + E + + + ++L +
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREG-YEVNQFVFTTLLKLLVSMDLA 120
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
D H + + + V T+LID Y CG ++ +F + K ++++ M++
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--------LLCFDRMK 361
A + +++L +F +M G P++ L +C+ G +C+DR
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDR-D 239
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
L I +++L ++G + EA + + MP ++D++ SL+
Sbjct: 240 LYVGIA--------LLELYTKSGEIAEAQQFFEEMP--KDDLIPWSLM 277
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 333/575 (57%), Gaps = 4/575 (0%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
Q + + +C ++ +HA V+K + + F LV+ G + A +F ++
Sbjct: 66 QSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSM--YFKLGYDEDAQRLFDEM 123
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEG 150
+N+L+ G L + M E G +P+ T ++ ACA + AL EG
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+HG V K+G V NSLINMYGK ++ AS +F++M +S+ SW++++ H N
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + + LF M P+++ +V++L ACT G + H + R ++I+
Sbjct: 244 GYAEKGMDLFNLMKRAGI-NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIII 302
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+++Y K G L +F + D+ ++ ++ M++G A+H G+EA+ +F M++EG+
Sbjct: 303 ATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 362
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
E D V + +LSACSH+GLV EG F+ M YR+ P + HY C+VDL+GR+G L +A
Sbjct: 363 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 422
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
ELI+SMP++ + VW +LL A +V+ N+E+G+ A+ L ++ +Y++LSN+Y+ A
Sbjct: 423 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 482
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W D +K+R M + L ++PG S +E K+++FV D+ HP D I+ + ++ +++
Sbjct: 483 LWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIR 542
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
G +P VL D+DE+ K + + HS+KLAIAF L+ G P+ I +NLR+C DCH+
Sbjct: 543 EAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHS 602
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K S++ +R II+RD KRFH F DG CSCRDYW
Sbjct: 603 TAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 317/559 (56%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H+ V+K F WN F SN + H +D A +F ++ E +N +I G+
Sbjct: 270 QQIHSFVIKTNFVWNVFV-SNALLDFYSKHDSVID-ARKLFDEMPEQDGVSYNVIISGYA 327
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ + + A L+ E+ + F F + + + G QIH + ++
Sbjct: 328 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSL++MY KC K E A IF + +S W+A+I+A+ G + E L+LF +M
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+++ S+L A + +L LGK H +I++ NV ++L+D+Y KCG ++
Sbjct: 448 VI-ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 506
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ F+ M D+ ++++ MIS A +G+ + L F EM+ GL+PD V ++GVLSACSH+
Sbjct: 507 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 566
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV EGL F+ M Y++ P +HY VVD++ R+G EA +L+ MPI ++++W S
Sbjct: 567 GLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSS 626
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L+A ++H N E+ AA LF + + YV +SN+YA A +W +V+K+ M +G
Sbjct: 627 VLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRG 686
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ + + F + DR HP + I + I + ++ GY PD S L + D
Sbjct: 687 VKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNED 746
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E K E LK HS++LAIAFALI +GSPI + +NLR C DCH K+IS I REI VR
Sbjct: 747 EKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVR 806
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F+DG CSC D+W
Sbjct: 807 DSTRFHHFRDGFCSCGDFW 825
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 188/380 (49%), Gaps = 8/380 (2%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L C E + +V ++K G+ + LV + S+ +D AC +F+++
Sbjct: 153 VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSN--RLDLACQLFKEM 210
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + +N +I G+ K+ E+A+ L+ EM G++P FTF A+ A L + G
Sbjct: 211 PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQ 270
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIH V K F ++FV N+L++ Y K + V A +F +M ++ S++ II+ +A +G
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG 330
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
LF E+ R ++ ++LS ++ ++G+ H I + ++V
Sbjct: 331 KHKYAFDLFRELQFTAFDR-KQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVG 389
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
SL+DMY KCG E+ +F + + + ++ MIS G +E L +F++M + +
Sbjct: 390 NSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 449
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
D + +L A + ++ G + ++ + V ++D+ + G + +A++
Sbjct: 450 ADQATFASLLRASASIASLSLGKQLHSFI-IKSGFMSNVFSGSALLDVYAKCGSIKDAVQ 508
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
Q MP +N V W +++SA
Sbjct: 509 TFQEMP-DRNIVSWNAMISA 527
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 161/337 (47%), Gaps = 11/337 (3%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A +F + E A + LI G+ + +F+EA L+ +M G EPD TF L
Sbjct: 97 GNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL 156
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
C + + Q+ + K+G++ L V N+L++ Y K +++ A +FK+M +
Sbjct: 157 SGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSV 216
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
S++A+I ++ +GL + + LF EM N +P E +VL A L + LG+ H
Sbjct: 217 SYNAMITGYSKDGLDEKAVNLFVEMQNSGL-KPTEFTFAAVLCANIGLDDIVLGQQIHSF 275
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+I+ NV V +L+D Y K + LF M ++ ++Y+V+ISG A G+ K A
Sbjct: 276 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA 335
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY----G 374
+F E+ + + +LS S+ G R IV T
Sbjct: 336 FDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMG-----RQIHAQTIVTTADSEILVGN 390
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+VD+ + G EA E+I + ++ V W +++SA
Sbjct: 391 SLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA 426
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC- 228
N +I+ Y K + A +F M +++ +W+ +I ++ + E +LF +M ++C
Sbjct: 87 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM--QRCG 144
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ V++LS C + +I+ +IV +L+D Y K L+
Sbjct: 145 TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 204
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
LF+ M + ++Y+ MI+G + G ++A+++F EM GL+P + + VL C++ G
Sbjct: 205 QLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIG 262
Query: 349 LVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
L + L ++ V V ++D + + +A +L MP +Q+ V +
Sbjct: 263 LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNV 321
Query: 408 LLSA 411
++S
Sbjct: 322 IISG 325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
N + +I YVK G L + LF M ++ +T++++I G + Q KEA +F +M
Sbjct: 82 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 141
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGM 385
R G EPD V +V +LS C+ + N+ + +KL Y V + +VD ++
Sbjct: 142 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN--TLVDSYCKSNR 199
Query: 386 LGEALELIQSMP 397
L A +L + MP
Sbjct: 200 LDLACQLFKEMP 211
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/559 (36%), Positives = 317/559 (56%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H+ V+K F WN F SN + H +D A +F ++ E +N +I G+
Sbjct: 230 QQIHSFVIKTNFVWNVFV-SNALLDFYSKHDSVID-ARKLFDEMPEQDGVSYNVIISGYA 287
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ + + A L+ E+ + F F + + + G QIH + ++
Sbjct: 288 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 347
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSL++MY KC K E A IF + +S W+A+I+A+ G + E L+LF +M
Sbjct: 348 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 407
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+++ S+L A + +L LGK H +I++ NV ++L+D+Y KCG ++
Sbjct: 408 VI-ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 466
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ F+ M D+ ++++ MIS A +G+ + L F EM+ GL+PD V ++GVLSACSH+
Sbjct: 467 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 526
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV EGL F+ M Y++ P +HY VVD++ R+G EA +L+ MPI ++++W S
Sbjct: 527 GLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSS 586
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L+A ++H N E+ AA LF + + YV +SN+YA A +W +V+K+ M +G
Sbjct: 587 VLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRG 646
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ + + F + DR HP + I + I + ++ GY PD S L + D
Sbjct: 647 VKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNED 706
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E K E LK HS++LAIAFALI +GSPI + +NLR C DCH K+IS I REI VR
Sbjct: 707 EKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVR 766
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F+DG CSC D+W
Sbjct: 767 DSTRFHHFRDGFCSCGDFW 785
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 152/312 (48%), Gaps = 7/312 (2%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
NTL+ + K + A L+ EM E D+FTF A+ A L + G QIH V K
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEM----PEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIK 238
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
F ++FV N+L++ Y K + V A +F +M ++ S++ II+ +A +G L
Sbjct: 239 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 298
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F E+ R ++ ++LS ++ ++G+ H I + ++V SL+DMY
Sbjct: 299 FRELQFTAFDR-KQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYA 357
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG E+ +F + + + ++ MIS G +E L +F++M + + D +
Sbjct: 358 KCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFAS 417
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L A + ++ G + ++ + V ++D+ + G + +A++ Q MP
Sbjct: 418 LLRASASIASLSLGKQLHSFI-IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-D 475
Query: 400 QNDVVWRSLLSA 411
+N V W +++SA
Sbjct: 476 RNIVSWNAMISA 487
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
N + +I YVK G L + LF M ++ +T++++I G + Q KEA +F +M
Sbjct: 77 NTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGM 385
R G EPD V +V +LS C+ + N+ + +KL Y V + +VD ++
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGN--TLVDSYCKSNR 194
Query: 386 LGEALELIQSMP 397
L A +L + MP
Sbjct: 195 LDLACQLFKEMP 206
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC- 228
N +I+ Y K + A +F M +++ +W+ +I ++ + E +LF +M ++C
Sbjct: 82 NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQM--QRCG 139
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ V++LS C + +I+ +IV +L+D Y K L+
Sbjct: 140 TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLAC 199
Query: 289 CLFRMMADKCQLTYSVMI 306
LF+ M + T++ ++
Sbjct: 200 QLFKEMPEIDSFTFAAVL 217
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 318/571 (55%), Gaps = 3/571 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT+ +L +VHA VL+ N F ++L+ S +D +F ++ E
Sbjct: 243 LTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDF--YSKCDCLDDMRRLFDEMPER 300
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N +I + L L+ EM + G + + + L + G QIH
Sbjct: 301 DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIH 360
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ +G + + N+LI+MY KC ++ A + F +KS SW+A+I + NG
Sbjct: 361 AQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHE 420
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L+LF +M RP+ + S++ A + L + LG+ H LIR+ +V + L
Sbjct: 421 EALQLFSDMRRAG-LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 479
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCGCL++ L F M ++ ++++ +IS A +G+ K A+ +F ML G PD
Sbjct: 480 VDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDS 539
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V ++ VL+ACSH GL +E + F MK +Y I P +HY CV+D +GR G + +++
Sbjct: 540 VTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLV 599
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP + + ++W S+L + ++H N E+ +AA LF + + YV+LSN+YARA +W D
Sbjct: 600 EMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWED 659
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
A ++ M +G+ + G+S VE+ +K+Y F S D + P D I + + ++ ++ +GY
Sbjct: 660 AACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGY 719
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PDI+ L VD + K E LK HS++LAIAFAL++ G+PIRI +NL C DCH K+
Sbjct: 720 KPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKM 779
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I R+IIVRD +RFH FKDG CSC DYW
Sbjct: 780 ISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 182/367 (49%), Gaps = 15/367 (4%)
Query: 50 VHAHVLKWGFFWNPF-CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+H +K+G + F C + L A C G + A +F ++ + A +N ++ G K
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCK---HGLLAAARRVFLEMHDKDAVTYNAMMMGCSK 213
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
E +AL L+ M G+ +FTF ++ A + L G Q+H V + ++FV
Sbjct: 214 EGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFV 273
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
NSL++ Y KC+ ++ +F +M ++ S++ IIAA+A N + L+LF EM
Sbjct: 274 NNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGF 333
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
R + ++LS L + +GK H L+ A ++ +LIDMY KCG L+
Sbjct: 334 DR-QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAK 392
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
F ++K ++++ +I+G +GQ +EAL +FS+M R GL PD + ++ A S
Sbjct: 393 SNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 452
Query: 349 LVNEGLLCFDRMKLEYRI----VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
++ G R Y I +V +VD+ + G L EAL MP ++N +
Sbjct: 453 MIGLG-----RQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMP-ERNSIS 506
Query: 405 WRSLLSA 411
W +++SA
Sbjct: 507 WNAVISA 513
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 24/255 (9%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++F N +++ Y + A +F ++ +W+ ++ AHA+ G S+ L LF M
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 132
Query: 225 NEKCWRPEESILVSVLS--ACT----HLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
E P+ + +VL+ CT H A+ G TH V V +L+D Y
Sbjct: 133 GEGVI-PDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTH-----------VFVCNTLLDAY 180
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
K G L +F M DK +TY+ M+ G + G +AL +F+ M R G+ +
Sbjct: 181 CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFS 240
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY--GCVVDLMGRAGMLGEALELIQSM 396
+L+ AG+ + LL L R + + ++D + L + L M
Sbjct: 241 SILTVA--AGMAHL-LLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEM 297
Query: 397 PIQQNDVVWRSLLSA 411
P ++++V + +++A
Sbjct: 298 P-ERDNVSYNVIIAA 311
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+NI +LN+I+ Y G L LF + T+++M+ A G+ +ALS
Sbjct: 72 KNIFSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALS 126
Query: 321 IFSEMLREGLEPDDVVYVGVLS 342
+F ML EG+ PD V VL+
Sbjct: 127 LFRAMLGEGVIPDRVTVTTVLN 148
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/504 (38%), Positives = 300/504 (59%), Gaps = 1/504 (0%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
++ G++ + ++AL L++ + + G + D T KAC L L +G QIH H K G
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F+ DL V + +++MY KC + A +F + +W+++I+ NG + L+++
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M + P+E +++ A + + AL+ G+ H ++I+ + V TSL+DMY KC
Sbjct: 121 RMRQSRVM-PDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E LF+ M + ++ M+ GLA HG +EA+++F M G+EPD V ++G+L
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
SACSHAGL +E M +Y I P ++HY C+VD +GRAG++ EA ++I++MP + +
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+ R+LL A ++ ++E G+ A LF + + YVLLSN+YA A RW DV R
Sbjct: 300 ASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 359
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M K + + PGFS ++V ++ FV DRSHP D IY+ + +M ++ +GY PD V
Sbjct: 360 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 419
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L DV+++EK L HS+KLAIA+ LI + IR+ +NLR+C DCH K IS ++ER
Sbjct: 420 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 479
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI++RD RFH F+DG CSC DYW
Sbjct: 480 EIVLRDANRFHHFRDGVCSCGDYW 503
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 3/204 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L++ K++HAH +K GF + S ++ G M A +F I P + ++I
Sbjct: 46 LDQGKQIHAHAIKAGFDSDLHVNSGILDM--YIKCGDMVNAGIVFNYISAPDDVAWTSMI 103
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G V ++AL +Y+ M + V PD +TF L KA + + AL++G Q+H +V K+
Sbjct: 104 SGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCV 163
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D FV SL++MY KC +E A +FK+M+ +++A W+A++ A +G E + LF M
Sbjct: 164 SDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 223
Query: 224 NNEKCWRPEESILVSVLSACTHLG 247
+ P+ + +LSAC+H G
Sbjct: 224 KSHGI-EPDRVSFIGILSACSHAG 246
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/550 (38%), Positives = 308/550 (56%), Gaps = 40/550 (7%)
Query: 96 AFDFNTLIRGFVKEVEFEE---ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+F +N +IR V V + + +Y M V PD TFP L + L G +
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H + G + D FV+ SL+NMY C + A +F K + +W++++ A+A GL
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 213 WSECLKLFGEMN-----------------------------------NEKCWRPEESILV 237
+ KLF EM NE RP E +
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VLSAC LGAL+ GK H + + +++++ T+LIDMY KCG LE+ +F + K
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 298 CQL-TYSVMISGLAMHGQGKEALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ YS MI LAM+G E +FSEM + + P+ V +VG+L AC H GL+NEG
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M E+ I P++QHYGC+VDL GR+G++ EA I SMP++ + ++W SLLS S++
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
+++ E A K L +++ + YVLLSN+YA+ RW +V IR EM KG+N+ PG S
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
VEV V++FV D S + IY M+ ++ +L+ GY D +VL D++E +K L
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALS 503
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF L+ G+P+RI +NLR+C DCH K+IS ++ REI+VRD RFH F+
Sbjct: 504 YHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFR 563
Query: 596 DGTCSCRDYW 605
DG+CSCRD+W
Sbjct: 564 DGSCSCRDFW 573
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 37/306 (12%)
Query: 48 KKVHAHVLKWGFFWNPFCAS---NLVATCA----------------LSHWGS-------- 80
++ HA +L +G +PF + N+ ++C L W S
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 81 --MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-----FERGVEPDNFT 133
+D A +F ++ E ++ LI G+V +++EAL L+ EM E V P+ FT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM- 192
+ AC +L AL++G +H ++ K E D+ + +LI+MY KC +E A +F +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+K V ++SA+I A GL EC +LF EM P V +L AC H G ++ G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 253 KCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLA 310
K +I I ++D+Y + G +++ M + L + ++SG
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 311 MHGQGK 316
M G K
Sbjct: 382 MLGDIK 387
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 327/602 (54%), Gaps = 64/602 (10%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK------------EVEF 112
C + L+ L+ G +D A +F QI EP +N LI G+++ ++ F
Sbjct: 324 CRTALIT--GLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPF 381
Query: 113 -------------------EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
EEAL L E+ G+ P + ++F AC+ + AL+ G Q+
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQV 441
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H KVG + + F N+LI MYGKC +E+A +F +M K + SW++ +AA N L
Sbjct: 442 HSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLL 501
Query: 214 SECLKLFGEM--NNEKCWR----------------------------PEESILVSVLSAC 243
E F M ++ W P IL +L C
Sbjct: 502 DEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVC 561
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
LGA +G+ H I+ +IV +LI MY KCGC + +F +M ++ T++
Sbjct: 562 GSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRR-IFDLMEERDIFTWN 620
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+I+G A HG G+EA+ ++ M G+ P++V +VG+L+ACSHAGLV+EG F M +
Sbjct: 621 TIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQD 680
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y + P +HY C+VDL+GR G + A + I MPI+ + V+W +LL A K+H N EIG+
Sbjct: 681 YGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKR 740
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AA+ LF+I + +YV+LSN+Y+ W +VA++R M +G+ + PG S ++ K++
Sbjct: 741 AAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMH 800
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
FV+ D+ H + I + ++ LK GY PD VL D+DE++K L HS+KLA+
Sbjct: 801 SFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 860
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
A+ L+ +G PI+I +NLR+C DCHT+ K +S + +R+I +RD RFH F++G+CSC D
Sbjct: 861 AYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920
Query: 604 YW 605
+W
Sbjct: 921 FW 922
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 154/356 (43%), Gaps = 27/356 (7%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN S L C H M A ++F ++ E + +I G+ + +A ++
Sbjct: 161 WN----SMLTGYC---HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
+M G+ PD F + A L L + K GFE D+ + +++N+Y +
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 181 KV-EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL--V 237
V + A F+ M +++ +WS +IAA + G + ++ P +SI
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-------DPVKSIACRT 326
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
++++ G +D + L I V+ +LI Y++ G + + LF M +
Sbjct: 327 ALITGLAQCGRIDDARI----LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ MI+G A +G+ +EAL + E+ R G+ P + ACS+ + G
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442
Query: 358 DRMKLEYRIVPTVQHYGC--VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
L ++ + C ++ + G+ + A ++ M + ++ V W S L+A
Sbjct: 443 ---SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAA 494
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 146/339 (43%), Gaps = 20/339 (5%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
A H G D A ++ I L+ G+ + EA +++ M ER
Sbjct: 74 AYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNT------ 127
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ A + + +F D+ NS++ Y ++ A +F++M
Sbjct: 128 --VAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMP 185
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++++ SW+ +I+ + + +F +M+ E P++S S LSA LG LD+ +
Sbjct: 186 ERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL-PDQSNFASALSAVKGLGNLDVLE 244
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVK-CGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
++ +V++ T+++++Y + L+ + F M ++ + T+S MI+ L+
Sbjct: 245 SLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHG 304
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G+ A++++ E D V + +A GL G + R+ E P V
Sbjct: 305 GRIDAAIAVY--------ERDPVKSIACRTALI-TGLAQCGRIDDARILFEQIPEPIVVS 355
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ ++ + GM+ EA EL MP +N + W +++
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPF-RNTISWAGMIAG 393
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 47/269 (17%)
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
G+ +V A +F M ++ + +W+++I+A+ NG+ L+ ++ +IL
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM--RTGAIL 102
Query: 237 VSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG------------- 282
LS LG L+ + G L RN A N ++I YV+ G
Sbjct: 103 ---LSGYGRLGRVLEARRVFDGMLERNTVAWN-----AMISCYVQNGDITMARRLFDAMP 154
Query: 283 --------CLEKGLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ G C LF M ++ ++++VMISG +A IF +
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGR- 382
M REGL PD + LSA GL N +L R + L+ V ++++ R
Sbjct: 215 MHREGLLPDQSNFASALSAVK--GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRD 272
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+L A++ +SM I++N+ W ++++A
Sbjct: 273 TSVLDTAIKFFESM-IERNEYTWSTMIAA 300
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/579 (36%), Positives = 338/579 (58%), Gaps = 24/579 (4%)
Query: 38 LKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVA---TCALSHWGSMDYACSIFRQI 91
+K+C L K++H HV K G PF ++L++ C+L +D A +F +
Sbjct: 17 IKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL-----IDNARKLFDEN 71
Query: 92 DEPGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ +N+L+ G+ ++ + L+ EM E GVE + T L + C L
Sbjct: 72 PQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGL 131
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
GM +HG K G + D V N L+ MY K +++ +F +M +K + +W+A+I +A
Sbjct: 132 GMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQ 191
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NGL + L+L+ EM + K + P+ LV VLS+C HLGAL +GK + + N
Sbjct: 192 NGLANNVLELYKEMES-KGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPF 250
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ +L++MY +CG L+K +F M K ++++ +I G MHGQG+ A+ +F EM+R G
Sbjct: 251 LNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGG 310
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++PD +V VLSACSHAGL N+GL F M+ +Y + P +HY C+VDL+GRAG L EA
Sbjct: 311 IKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEA 370
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
ELI+SM ++ + +W +LL A K+H N+E+ E+A + + ++ + YVLLSN+Y A
Sbjct: 371 RELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNVYTEA 430
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+ ++R M + L + PG S VE +V+ F + DR+HP + IY+ ++++E +
Sbjct: 431 GNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNELENLV 490
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKG---HSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
K D+ ++ D + + E L HS+KLA+AFAL++ + + I I +NLR+C
Sbjct: 491 K------DLDGCKKN-DHERREEYLNSMGVHSEKLAVAFALLNTRKETEIIIIKNLRICG 543
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + KL+S I +R+ +VRD RFH FK+G CSC++YW
Sbjct: 544 DCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 156/302 (51%), Gaps = 7/302 (2%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G P+ FTFP K+CA L G Q+H HVFK G + FVQ SLI+MYGKC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 182 VEFASAIFKQMDQ--KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
++ A +F + Q K ++++++ +A N + + LF EM E ++ +
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEM-RELGVEINGVTMLGL 119
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
+ C G L LG C HG ++ ++ V L+ MYVK G ++ G LF M K
Sbjct: 120 VQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
+T++ MI+G A +G L ++ EM +G PD + VGVLS+C+H G ++ G +
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERK 239
Query: 360 MK-LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
M+ + P + + +V++ R G L +A ++ MP+ ++ V W +++ +H
Sbjct: 240 MEGFGFSSNPFLNN--ALVNMYARCGNLKKARDIFDGMPV-KSVVSWTAIIGGYGMHGQG 296
Query: 419 EI 420
E+
Sbjct: 297 EV 298
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 334/580 (57%), Gaps = 14/580 (2%)
Query: 37 ILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL C L++ K+VH V K GF ++++ S G + A +F +
Sbjct: 10 ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDM--YSKCGMVGEAARVFNTLPV 67
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N +I G+ E EEAL L+ EM E+G PD +T+ + KAC+ A EGMQI
Sbjct: 68 RNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQI 127
Query: 154 HGHVFKVGFE--CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
H + + GF V +L+++Y KC ++ A +F ++++KSV SWS +I +A
Sbjct: 128 HAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQED 187
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIV 270
E + LF E+ E R + +L S++ L+ GK H I+ L + V
Sbjct: 188 NLKEAMDLFRELR-ESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSV 246
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
S++DMY+KCG + LFR M ++ ++++VMI+G HG G +A+ +F+EM G+
Sbjct: 247 ANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGI 306
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
EPD V Y+ VLSACSH+GL+ EG F + +I P V+HY C+VDL+GR G L EA
Sbjct: 307 EPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAK 366
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
LI+ MP++ N +W++LLS ++H ++E+G+ + L + ++P++YV++SNMYA A
Sbjct: 367 NLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAG 426
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W + KIR + KGL + G S VE+ ++++ F + D HP + I+E++ +ME ++K
Sbjct: 427 YWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVK 486
Query: 511 FE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH----LSQGSPIRIARNLRMC 565
E GY I+ L DV+E+ K E L+ HS+KLAI L+ L IRI +NLR+C
Sbjct: 487 EEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKNLRVC 546
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + K +S + + +VRD RFHRF++G CSC DYW
Sbjct: 547 GDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586
>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/482 (39%), Positives = 302/482 (62%), Gaps = 1/482 (0%)
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
RGVE + T+ + +L+EG ++H V G E D+ V +L+NMYGKC+ VE
Sbjct: 4 RGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEE 63
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN-EKCWRPEESILVSVLSAC 243
A A F+++ + +V SWSA++AA+A NG L+L+ EM + K P +++L AC
Sbjct: 64 ARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDAC 123
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+ LGAL G+ H ++ +++V +L++ Y +CG L +F M + +++S
Sbjct: 124 SFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWS 183
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MIS A G+ EA+ ++ ML EG PDD++++ VL ACS++G+V F + +
Sbjct: 184 SMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGD 243
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
++ PT++HY C+VD++GRAG L +A +L++ MP +++ ++LSA K++ ++E GE
Sbjct: 244 TQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEA 303
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AA+ +F+++ + S Y+ L+N+Y+ A+R D A+IR M +G+ + PG S +EV +V+
Sbjct: 304 AAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVH 363
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
+F++ D+ HP D IY I ++ Q+K GY D VL+DV+EDEK L HS+KLAI
Sbjct: 364 EFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAI 423
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF LI G+P+RI +NLR+C+DCH TK+IS + REI+VRD RFH F DG CSC D
Sbjct: 424 AFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCND 483
Query: 604 YW 605
YW
Sbjct: 484 YW 485
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSI 87
+T+L C L E +K+HA V + GF ++LV AL ++ GS+ A +
Sbjct: 117 ITLLDACSFLGALAEGRKIHAAVAERGF------DTDLVVCNALVNFYGRCGSLGDAKIV 170
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
F + ++++I F + +EA+ LY+ M G PD+ F ++ AC+
Sbjct: 171 FDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACS 225
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/602 (35%), Positives = 327/602 (54%), Gaps = 64/602 (10%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK------------EVEF 112
C + L+ L+ G +D A +F QI EP +N LI G+++ ++ F
Sbjct: 324 CRTALIT--GLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPF 381
Query: 113 -------------------EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
EEAL L E+ G+ P + ++F AC+ + AL+ G Q+
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQV 441
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H KVG + + F N+LI MYGKC +E+A +F +M K + SW++ +AA N L
Sbjct: 442 HSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLL 501
Query: 214 SECLKLFGEM--NNEKCWR----------------------------PEESILVSVLSAC 243
E F M ++ W P IL +L C
Sbjct: 502 DEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVC 561
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
LGA +G+ H I+ +IV +LI MY KCGC + +F +M ++ T++
Sbjct: 562 GSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRR-IFDLMEERDIFTWN 620
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+I+G A HG G+EA+ ++ M G+ P++V +VG+L+ACSHAGLV+EG F M +
Sbjct: 621 TIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQD 680
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y + P +HY C+VDL+GR G + A + I MPI+ + V+W +LL A K+H N EIG+
Sbjct: 681 YGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKR 740
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AA+ LF+I + +YV+LSN+Y+ W +VA++R M +G+ + PG S ++ K++
Sbjct: 741 AAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMH 800
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
FV+ D+ H + I + ++ LK GY PD VL D+DE++K L HS+KLA+
Sbjct: 801 SFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAV 860
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
A+ L+ +G PI+I +NLR+C DCHT+ K +S + +R+I +RD RFH F++G+CSC D
Sbjct: 861 AYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCED 920
Query: 604 YW 605
+W
Sbjct: 921 FW 922
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 171/397 (43%), Gaps = 32/397 (8%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN S L C H M A ++F ++ E + +I G+ + +A ++
Sbjct: 161 WN----SMLTGYC---HSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFC 213
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
+M G+ PD F + A L L + K GFE D+ + +++N+Y +
Sbjct: 214 KMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT 273
Query: 181 KV-EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL--V 237
V + A F+ M +++ +WS +IAA + G + ++ P +SI
Sbjct: 274 SVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-------DPVKSIACRT 326
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
++++ G +D + L I V+ +LI Y++ G + + LF M +
Sbjct: 327 ALITGLAQCGRIDDARI----LFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR 382
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ MI+G A +G+ +EAL + E+ R G+ P + ACS+ + G
Sbjct: 383 NTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVH 442
Query: 358 DRMKLEYRIVPTVQHYGC--VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L ++ + C ++ + G+ + A ++ M + ++ V W S L+A +
Sbjct: 443 ---SLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM-VTKDIVSWNSFLAALVQN 498
Query: 416 HNLEIGEIAAKNLF-QINSHHPSDYVLLSNMYARAQR 451
L+ A+N F + S + + + YA A++
Sbjct: 499 DLLD----EARNTFDNMLSRDDVSWTTIISAYAHAEQ 531
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 146/339 (43%), Gaps = 20/339 (5%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
A H G D A ++ I L+ G+ + EA +++ M ER
Sbjct: 74 AYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNT------ 127
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ A + + +F D+ NS++ Y ++ A +F++M
Sbjct: 128 --VAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMP 185
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++++ SW+ +I+ + + +F +M+ E P++S S LSA LG LD+ +
Sbjct: 186 ERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLL-PDQSNFASALSAVKGLGNLDVLE 244
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVK-CGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
++ +V++ T+++++Y + L+ + F M ++ + T+S MI+ L+
Sbjct: 245 SLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHG 304
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G+ A++++ E D V + +A GL G + R+ E P V
Sbjct: 305 GRIDAAIAVY--------ERDPVKSIACRTALI-TGLAQCGRIDDARILFEQIPEPIVVS 355
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ ++ + GM+ EA EL MP +N + W +++
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPF-RNTISWAGMIAG 393
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 47/269 (17%)
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
G+ +V A +F M ++ + +W+++I+A+ NG+ L+ ++ +IL
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM--RTGAIL 102
Query: 237 VSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG------------- 282
LS LG L+ + G L RN A N ++I YV+ G
Sbjct: 103 ---LSGYGRLGRVLEARRVFDGMLERNTVAWN-----AMISCYVQNGDITMARRLFDAMP 154
Query: 283 --------CLEKGLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ G C LF M ++ ++++VMISG +A IF +
Sbjct: 155 SRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGR- 382
M REGL PD + LSA GL N +L R + L+ V ++++ R
Sbjct: 215 MHREGLLPDQSNFASALSAVK--GLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRD 272
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+L A++ +SM I++N+ W ++++A
Sbjct: 273 TSVLDTAIKFFESM-IERNEYTWSTMIAA 300
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 331/575 (57%), Gaps = 28/575 (4%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C N L K VH+ +K F ++ L+ S G +D A +F ++
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM--YSKCGDLDGALRVFEKM 312
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + ++I G+ ++ + A+ L +M + GV+ D ++ ACA+ +L G
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H ++ E +LFV N+L++MY KC +E A+++F M K + SW+ +I
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------- 425
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
GE+ +P+ + VL AC L AL+ GK HG ++RN + + V
Sbjct: 426 ---------GEL------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+D+YVKCG L LF M+ K ++++VMI+G MHG G EA++ F+EM G+E
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD+V ++ +L ACSH+GL+ +G F MK ++ I P ++HY C+VDL+ R G L +A E
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+++PI + +W +LL + +H++E+ E A+ +F++ + YVLL+N+YA A++
Sbjct: 591 FIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEK 650
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS-QDRSHPAWDNIYEMIHQMEWQLK 510
W +V ++R ++ +GL ++PG S +E+ KV FVS + SHP NI ++ +M ++K
Sbjct: 651 WEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
EG+ P L + DE +K L GHS+KLA+AF L+ L IR+ +NLR+C DCH
Sbjct: 711 EEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 770
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S REI++RD RFH FKDG CSCR +W
Sbjct: 771 MAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 25/364 (6%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ + +N++I G+V E L +Y +M G++ D T ++ CA
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L G +H K FE + N+L++MY KC ++ A +F++M +++V SW+++
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA + +G +KL +M E + + + S+L AC G+LD GK H + N
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGV-KLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N+ V +L+DMY KCG +E +F M K ++++ MI
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---------------- 426
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
L+PD VL AC+ + G + L +VDL +
Sbjct: 427 -----ELKPDSRTMACVLPACASLSALERGKEIHGYI-LRNGYSSDRHVANALVDLYVKC 480
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G+LG A L +P D+V +++ A H IA N + P + +S
Sbjct: 481 GVLGLARLLFDMIP--SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 444 NMYA 447
+YA
Sbjct: 539 ILYA 542
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 161/375 (42%), Gaps = 55/375 (14%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R ID D+N I F + + E A+ L + E + T+ ++ + CA L++
Sbjct: 60 RTIDHQ-VTDYNAKILHFCQLGDLENAMELI--CMCKKSELETKTYSSVLQLCAGLKSFT 116
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+G ++H + D + L++ Y C ++ +F M++K+V W+ +++ +A
Sbjct: 117 DGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 209 SNGLWSECLKLFGEMNNE--KCWRPEESI------------------------------- 235
G + E + LF M + + RPE +
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 236 -----------------LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
++SVL C + G L LGK H I++ + +L+DMY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG L+ L +F M ++ ++++ MI+G G+ A+ + +M +EG++ D V
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L AC+ +G ++ G D +K + + ++D+ + G + EA + S +
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYAKCGSM-EAANSVFSTMV 414
Query: 399 QQNDVVWRSLLSASK 413
++ + W +++ K
Sbjct: 415 VKDIISWNTMIGELK 429
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/559 (35%), Positives = 322/559 (57%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +K + W+ F A+ L+ + + +D A ++F ++ E +N +I G+
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDY--IDLAKNLFDEMPELDGVSYNIIITGYA 321
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++E++ L+ + + NF F + A L G Q H ++
Sbjct: 322 WNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQ 381
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N+L++MY KCEK E A+ IF + ++ W+AII+ + G E LK+F EMN E
Sbjct: 382 VGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNREN 441
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+++ S L A +L ++ LGK H S+IR +V + L+DMY CG ++
Sbjct: 442 V-HGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDA 500
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ +F+ M D+ + ++ +IS + +G + S F++M+ GL PD V ++ VL+ACSH
Sbjct: 501 IEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHR 560
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV + L F+ M Y++ P +HY ++D++ R+G EA LI MP + ++V+W S
Sbjct: 561 GLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSS 620
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L++ ++H N ++ + AA LF++++ + YV +SN+YA A +W + AK++ M +G
Sbjct: 621 VLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERG 680
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + +S VE+ +V+ F + DR+HP + I I+ + + EGY PD S L++VD
Sbjct: 681 VKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVD 740
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+ K E LK HS++LAIAFALI+ +GSPI I +NLR C DCH K+IS I REI VR
Sbjct: 741 EEMKIESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVR 800
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F+DG+CSC DYW
Sbjct: 801 DSSRFHHFRDGSCSCGDYW 819
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 180/381 (47%), Gaps = 13/381 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV----ATCALSHWGSMDYACSIFRQ 90
L+ L+E ++H+H++++GF + ++LV TC L D A +F +
Sbjct: 150 LSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL------DIASQLFSE 203
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + FN +I G+ K EEAL L+ +M +P FTF A+ + + G
Sbjct: 204 MPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFG 263
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
QIHG K + D+FV N+L++ Y K + ++ A +F +M + S++ II +A N
Sbjct: 264 QQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWN 323
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + + LF + R + A L L +G+ TH + + V V
Sbjct: 324 GQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELN-LSMGRQTHAQAVVTTAVSEVQV 382
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+DMY KC E +F +A + + ++ +IS G +EAL +F EM RE +
Sbjct: 383 GNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENV 442
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
D + L A ++ V+ G + + ++ +V +VD+ G + +A+
Sbjct: 443 HGDQATFASTLKASANLASVSLGKQLHSSV-IRLGLLSSVFSGSVLVDMYANCGSMKDAI 501
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
E+ + MP +N V W +L+SA
Sbjct: 502 EVFKEMP-DRNIVCWNALISA 521
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 11/313 (3%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I G+ + + +EA LY EM GV+PD+ TF L LKE +QIH H+ + G
Sbjct: 114 MIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFG 173
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
F L V NSL++ Y K ++ AS +F +M K S++ +I + G E LKLF
Sbjct: 174 FSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFM 233
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M N ++P ++L + G+ HG I+ ++ V +L+D Y K
Sbjct: 234 QMRNMD-FQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKH 292
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
++ LF M + ++Y+++I+G A +GQ +++ +F + + + + +L
Sbjct: 293 DYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATML 352
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPT----VQHYGCVVDLMGRAGMLGEALELIQSMP 397
S + E L R +V T VQ +VD+ + +A + ++
Sbjct: 353 SVAAI-----ELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407
Query: 398 IQQNDVVWRSLLS 410
+N V W +++S
Sbjct: 408 Y-RNSVPWTAIIS 419
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
RN S++N++V YVK L + LF M + ++++++MI G + + Q KEA +
Sbjct: 75 RNTSSVNMMVSG-----YVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFN 129
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+++EM R G++PD + + +LS + E L + + + ++ + +VD
Sbjct: 130 LYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHI-IRFGFSASLIVFNSLVDSY 188
Query: 381 GRAGMLGEALELIQSMPIQQN 401
+ L A +L MP + +
Sbjct: 189 CKTCCLDIASQLFSEMPTKDS 209
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/588 (36%), Positives = 323/588 (54%), Gaps = 34/588 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H V+K + F ++L+ S G+ D A +F + +N +I F
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSS--GAPDLAHRVFTNMPGKDVVSWNAMINAFALG 252
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
++AL L+ EM + V+P+ T ++ ACAK L+ G I ++ GF L +
Sbjct: 253 GLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN 312
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC------------- 216
N++++MY KC + A +F +M +K + SW+ ++ HA G + E
Sbjct: 313 NAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTA 372
Query: 217 ------------------LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
L LF EM K +P+E L+ L A LGA+D G H
Sbjct: 373 AWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVY 432
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ ++ LN + TSL+DMY KCG L K + +F + K +S MI LAM+GQGK A
Sbjct: 433 IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAA 492
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +FS ML ++P+ V + +L AC+HAGLVNEG F++M+ Y IVP +QHY CVVD
Sbjct: 493 LDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVD 552
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
+ GRAG+L +A I+ MPI VW +LL A H N+E+ E+A +NL ++ +
Sbjct: 553 IFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGA 612
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
+VLLSN+YA+A W V+ +R M + + P S ++V V++F+ D SHP I
Sbjct: 613 FVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKI 672
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSPIR 557
Y + ++ + K GY PD+S +L+ +ED E+ L HS+KLAIAF LI + PIR
Sbjct: 673 YSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLISTASSQPIR 732
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +N+R+C DCH + KL+S +Y+R+I++RDR RFH F+ G CSC DYW
Sbjct: 733 IVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 215/428 (50%), Gaps = 39/428 (9%)
Query: 18 EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
E KG + N ++ L + C N + K++HAH+L+ F +P+ AS L+ A+S
Sbjct: 60 EAVKGEKGN-EVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISS 118
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPA 136
+ YA ++F QI +P + +NTLIRG+ + ++ ++ M E P+ FTFP
Sbjct: 119 CSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPF 178
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
LFKA ++L+ L G +HG V K DLF+ NSLIN YG + A +F M K
Sbjct: 179 LFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKD 238
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+A+I A A GL + L LF EM + +P +VSVLSAC L+ G+
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLFQEMEMKDV-KPNVITMVSVLSACAKKIDLEFGRWIC 297
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA------ 310
+ N ++I+ +++DMYVKCGC+ LF M++K ++++ M+ G A
Sbjct: 298 SYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYD 357
Query: 311 -------------------------MHGQGKEALSIFSEM-LREGLEPDDVVYVGVLSAC 344
+G+ + ALS+F EM L + +PD+V + L A
Sbjct: 358 EAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCAS 417
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV- 403
+ G ++ G +K ++ I ++D+ + G L +A+E+ + +++ DV
Sbjct: 418 AQLGAIDFGHWIHVYIK-KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHA--VERKDVY 474
Query: 404 VWRSLLSA 411
VW +++ A
Sbjct: 475 VWSAMIGA 482
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/514 (39%), Positives = 297/514 (57%), Gaps = 9/514 (1%)
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P F N ++R + +AL G + F+ + C +AL Q+
Sbjct: 95 PSTFRLNAILR----SLRGPDALRFLRRARALGRRGNAFSLSIVLGHC---RALAHARQL 147
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H +V G D + SL++ Y C + A +F +M + +W+ +I + N
Sbjct: 148 HANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRRT 207
Query: 214 SECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ LKLF M E P++ + +L ACT LGALD G+ + + + V
Sbjct: 208 KDALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGGELKVRN 267
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SLI MY KCGC++K +F K +T+S MISGLA +G GK+A+S F EM R G+ P
Sbjct: 268 SLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAP 327
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D+ + GVLSACSH+GLV+EG FD M EY++ P V HYGC+VDLMGRAG+L +A EL
Sbjct: 328 DEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYEL 387
Query: 393 I-QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+ + M + + +WR+LL A ++H ++++GE +L ++ + DYVLL N YA +
Sbjct: 388 VVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVED 447
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA++R M KG+ +PG + VE+ ++++F++ D SHP IYE + ++ L+
Sbjct: 448 WGKVAEVRKLMKEKGIQTTPGCTTVELNGEIHEFIAADASHPRKAEIYEKLDEINKHLRI 507
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P++S L D+D + K L HS+KLAIAFAL+ Q PIR+A+NLR+C DCH +
Sbjct: 508 AGYVPNVSSELHDLDSEGKECALAYHSEKLAIAFALLVTPQHRPIRLAKNLRVCVDCHNF 567
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK+ S +Y R +IVRDR RFH FK+ CSC DYW
Sbjct: 568 TKVFSGVYHRLVIVRDRTRFHHFKEFQCSCNDYW 601
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/539 (40%), Positives = 323/539 (59%), Gaps = 11/539 (2%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
N++ +C + + + + A S F ++ A +NT+I G+ + E E+A E+F +
Sbjct: 128 NIMLSCYVRN-VNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKA----RELFYSMM 182
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
E + ++ A+ + L++ H FKV + ++I Y K +KVE A A
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 188 IFKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+FK M K++ +W+A+I+ + N + LKLF M E RP S L S L C+ L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI-RPNSSGLSSALLGCSEL 297
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
AL LG+ H + ++ +V TSLI MY KCG L LF +M K + ++ MI
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
SG A HG +AL +F EM+ + PD + +V VL AC+HAGLVN G+ F+ M +Y++
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV 417
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P HY C+VDL+GRAG L EAL+LI+SMP + + V+ +LL A +VH N+E+ E AA+
Sbjct: 418 EPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
L Q+NS + + YV L+N+YA RW DVA++R M + + PG+S +E+ KV+ F
Sbjct: 478 KLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFR 537
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
S DR HP D+I++ + ++E ++K GY P++ L +V+E++K + L HS+KLA+AF
Sbjct: 538 SSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFG 597
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I L QGS I++ +NLR+C DCH K IS I +REIIVRD RFH FKDG+CSC DYW
Sbjct: 598 CIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D+ F N +I V+ + + AL +++ M + N + K +++ M
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRM------M 110
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+ H +F E D F N +++ Y + E A + F +M K ASW+ +I +A G
Sbjct: 111 EAH-QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 212 LWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ +LF M NE W +++S G DL K +H + V+
Sbjct: 170 EMEKARELFYSMMEKNEVSWN-------AMISGYIECG--DLEKASH--FFKVAPVRGVV 218
Query: 270 VETSLIDMYVKCGCLEKGLCLFR-MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
T++I Y+K +E +F+ M +K +T++ MISG + + ++ L +F ML E
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 329 GLEPDDVVYVGVLSACSHAG----------LVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
G+ P+ L CS +V++ LC D V ++
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCND-----------VTALTSLIS 327
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ + G LG+A +L + M +++ V W +++S H N +
Sbjct: 328 MYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 367
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 333/575 (57%), Gaps = 14/575 (2%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQ 90
+L C L + K+ +HAH+ F + + N+ A C GS++ A +F +
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC-----GSLEEAQDLFDK 165
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + LI G+ + + EAL L+ +M G +P+ FT +L KA + G
Sbjct: 166 MPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHG 225
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H K G++ ++ V +SL++MY + + A IF + K+V SW+A+IA HA
Sbjct: 226 RQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARK 285
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G ++LF +M + + P SVL AC G+L+ GK H +I++ +
Sbjct: 286 GEGEHVMRLFXQMLRQG-FEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYI 343
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LIDMY K G ++ +FR + + ++++ +ISG A HG G EAL +F +ML+ +
Sbjct: 344 GNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKV 403
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+P+++ ++ VL+ACSH+GL++EG F+ MK +++I V H+ VVDL+GRAG L EA
Sbjct: 404 QPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLLGRAGRLNEAN 462
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I+ MPI+ VW +LL A ++H N+++G AA+ +F+++ H +VLLSN+YA A
Sbjct: 463 KFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAG 522
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
R D AK+R M G+ + P S VE+ +V+ FV+ D SHP + I M ++ ++K
Sbjct: 523 RLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIK 582
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL +++ ++ +L+ HS+KLA+AFA++ G IRI +N+R+C DCH+
Sbjct: 583 EIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICGDCHS 642
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K S + REIIVRD RFH F G CSCRDYW
Sbjct: 643 AFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 155/289 (53%), Gaps = 4/289 (1%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+EP+ + + C L+ LK+G IH H+ FE DL + N ++NMY KC +E A
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F +M K + SW+ +I+ ++ +G SE L LF +M + ++P E L S+L A
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLG-FQPNEFTLSSLLKASGTG 219
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
+ G+ H ++ +NV V +SL+DMY + + + +F +A K ++++ +I
Sbjct: 220 PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALI 279
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+G A G+G+ + +F +MLR+G EP Y VL AC+ +G + +G + ++
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHV-IKSGG 337
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
P ++D+ ++G + +A ++ + + ++Q+ V W S++S H
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISGYAQH 385
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 26/196 (13%)
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+ CG LE L+ M +KC TY + K+ +I + + E D V+
Sbjct: 96 INCGSLEPERTLYSKMLNKC--TYLRKL---------KQGRAIHAHIQSSTFEDDLVLLN 144
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM-- 396
+L+ + G + E FD+M + + TV ++ ++G EAL L M
Sbjct: 145 FILNMYAKCGSLEEAQDLFDKMPTKDMVSWTV-----LISGYSQSGQASEALALFPKMLH 199
Query: 397 -PIQQNDVVWRSLLSASKV----HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
Q N+ SLL AS HH ++ + K + +N H S L +MYAR
Sbjct: 200 LGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSS---LLDMYARWAH 256
Query: 452 WYDVAKIRTEMASKGL 467
+ I +A+K +
Sbjct: 257 MREAKVIFNSLAAKNV 272
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/528 (38%), Positives = 304/528 (57%), Gaps = 1/528 (0%)
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+G +D A +F I +N LI G E+L L+ M + G + + T A+
Sbjct: 353 YGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAV 412
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
K+ A L+A+ + Q+H K+GF D V N LI+ Y KC + +A+ +F++ ++
Sbjct: 413 LKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNI 472
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
+++++I A + + +KLF EM K P+ +L S+L+AC L A + GK H
Sbjct: 473 IAFTSMITALSQCDHGEDAIKLFMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 531
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
LI+ +V +L+ Y KCG +E F + DK +++S MI GLA HG GK
Sbjct: 532 HLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKR 591
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +F M+ E + P+ + VL AC+HAGLV+E F MK + I T +HY C++
Sbjct: 592 ALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMI 651
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L +A+EL+ SMP + N VW +LL+AS+VH + E+G++AA+ LF +
Sbjct: 652 DLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSG 711
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
+VLL+N YA A W +VAK+R M + + P S VE+ +V+ F+ D+SHP +
Sbjct: 712 THVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARD 771
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ + GY P++ L DVD+ EK L HS++LA+AFALI G+PIR
Sbjct: 772 IYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIR 831
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C DCH K IS I REII+RD RFH F DG CSC DYW
Sbjct: 832 VKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 6/323 (1%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+R E +LK + +VHA + G + F A+ LVA +G +D A
Sbjct: 98 GVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVANALVAM--YGGFGFVDEAR 155
Query: 86 SIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F + + A +N ++ FVK +A+ L+ EM GV P+ F F + AC
Sbjct: 156 RVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGS 215
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ L+ G ++H V + G++ D+F N+L++MY K + A+ +F ++ + V SW+A I
Sbjct: 216 RDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFI 275
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS--ACTHLGALDLGKCTHGSLIRN 262
+ +G L+L +M + P L S+L A GA LG+ HG +I+
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGLV-PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKA 334
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ + + +L+DMY K G L+ +F + K L ++ +ISG + G E+LS+F
Sbjct: 335 CADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLF 394
Query: 323 SEMLREGLEPDDVVYVGVLSACS 345
M +EG + + VL + +
Sbjct: 395 CRMRKEGSDINRTTLAAVLKSTA 417
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 176/370 (47%), Gaps = 23/370 (6%)
Query: 50 VHAHVLKWGF---FWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
+HAH+LK G F N + + C L GS A +F + +P +++L+ +
Sbjct: 26 IHAHLLKSGLLHAFRNHLLS--FYSKCRLP--GS---ARRVFDETPDPCHVSWSSLVTAY 78
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
EAL + M RGV + F P + K CA L G+Q+H G D+
Sbjct: 79 SNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHAVAVSTGLSGDI 135
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
FV N+L+ MYG V+ A +F + + ++ SW+ +++A N S+ ++LFGEM
Sbjct: 136 FVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM-- 193
Query: 226 EKCW---RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
W RP E V++ACT L+ G+ H ++R +V +L+DMY K G
Sbjct: 194 --VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLG 251
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ +F + ++++ ISG +HG + AL + +M GL P+ +L
Sbjct: 252 DIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILK 311
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRAGMLGEALELIQSMPIQQN 401
AC+ AG L + + + G +VD+ + G+L +A ++ + +P +++
Sbjct: 312 ACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIP-RKD 370
Query: 402 DVVWRSLLSA 411
++W +L+S
Sbjct: 371 LLLWNALISG 380
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 133/299 (44%), Gaps = 25/299 (8%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ L A Q+L G IH H+ K G +N L++ Y KC A +F +
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRVFDET 63
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
SWS+++ A+++N L E L F M + R E L VL G LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAM-RARGVRCNEFALPIVLKCAPDAG---LG 119
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAM 311
H + + ++ V +L+ MY G +++ +F A D+ ++++ M+S
Sbjct: 120 VQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVK 179
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT-- 369
+ + +A+ +F EM+ G+ P++ + V++AC+ + + G K+ +V T
Sbjct: 180 NDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAG------RKVHAMVVRTGY 233
Query: 370 ---VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH----HNLEI 420
V +VD+ + G + A + +P + DVV W + +S +H H LE+
Sbjct: 234 DKDVFTANALVDMYSKLGDIHMAALVFGKVP--KTDVVSWNAFISGCVLHGHDQHALEL 290
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C +L E+ K+VHAH++K F + F + LV T A GS++ A F +
Sbjct: 512 SLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYA--KCGSIEDADLAFSGLP 569
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ G ++ +I G + + AL ++ M + + P++ T ++ AC + E +
Sbjct: 570 DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEA-K 628
Query: 153 IHGHVFKVGFECDLFVQ--NSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ K F D + + +I++ G+ K++ A + M + + A W A++AA
Sbjct: 629 GYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/589 (37%), Positives = 325/589 (55%), Gaps = 35/589 (5%)
Query: 49 KVHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++H K+GFF +PF S L+A A G + A +F ++ +N +I G+
Sbjct: 136 EIHGLASKFGFFHADPFIQSALIAMYAAC--GRIMDARFLFDKMSHRDVVTWNIMIDGYS 193
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ ++ L LY EM G EPD + ACA L G IH + GF
Sbjct: 194 QNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSH 253
Query: 168 VQNSLINMYGKCEK-------------------------------VEFASAIFKQMDQKS 196
+Q SL+NMY C V+ A IF +M +K
Sbjct: 254 IQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKD 313
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ WSA+I+ +A + E L+LF EM + P++ ++SV+SAC ++GAL K H
Sbjct: 314 LVCWSAMISGYAESYQPLEALQLFNEMQRRRIV-PDQITMLSVISACANVGALVQAKWIH 372
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+N + + +LIDMY KCG L K +F M K +++S MI+ AMHG
Sbjct: 373 TYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDAD 432
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
A+++F M + +EP+ V ++GVL ACSHAGLV EG F M E+RI P +HYGC+
Sbjct: 433 SAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCM 492
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL RA L +A+ELI++MP N ++W SL+SA + H +E+GE AA L ++ H
Sbjct: 493 VDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHD 552
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
V+LSN+YA+ +RW DV +R M KG+++ S +EV +V+ F+ DR H D
Sbjct: 553 GALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSD 612
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
IY+ + + QLK GY+P S +L D++E+EK+E + HS+KLA+ + LI + S I
Sbjct: 613 EIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCI 672
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLR+C DCH++ KL+S ++ EI++RDR RFH F G CSCRDYW
Sbjct: 673 RIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/453 (28%), Positives = 214/453 (47%), Gaps = 53/453 (11%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW--------GSMDYACSIF 88
+L +CK L K++HA +L+ + SNL+ + ++DYA S+F
Sbjct: 18 LLASCKTLRHVKQIHAQILR-----SKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLF 72
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
I P N L+R F + E L LY + G D F+FP L KA +KL AL
Sbjct: 73 SHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALN 132
Query: 149 EGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G++IHG K G F D F+Q++LI MY C ++ A +F +M + V +W+ +I +
Sbjct: 133 LGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGY 192
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ N + LKL+ EM P+ IL +VLSAC H G L GK H + N +
Sbjct: 193 SQNAHYDHVLKLYEEMKTSGT-EPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVG 251
Query: 268 VIVETSLIDMYVKCGCL-------------------------------EKGLCLFRMMAD 296
++TSL++MY CG + + +F M +
Sbjct: 252 SHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVE 311
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--L 354
K + +S MISG A Q EAL +F+EM R + PD + + V+SAC++ G + + +
Sbjct: 312 KDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWI 371
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
+ R +P ++D+ + G L +A E+ ++MP ++N + W S+++A +
Sbjct: 372 HTYADKNGFGRTLPI---NNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMINAFAM 427
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
H + + IA + + + P+ + +YA
Sbjct: 428 HGDAD-SAIALFHRMKEQNIEPNGVTFIGVLYA 459
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/564 (36%), Positives = 323/564 (57%), Gaps = 33/564 (5%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
L+ G +D A + + + LI G+ + EA+ +N M G+ PD T
Sbjct: 180 GLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVT 239
Query: 134 FPALFKACAKLQALKEGMQIHGHVFK---------VGFECDLFVQ--------------- 169
+ AC +L+ L G +H V V D++ +
Sbjct: 240 VIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALG 299
Query: 170 --------NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
N++I+ Y K V+ A ++F QM+ V +++++I + G E L LF
Sbjct: 300 RGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFT 359
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M + +V +L+A LGAL G+ H + + + +V + T+L+DMY+KC
Sbjct: 360 KMRRHGLG-ADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKC 418
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E+ + F+ M+ + T+S MI GLA +G GK AL F M +G + V Y+ VL
Sbjct: 419 GRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVL 478
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+ACSH+ L++EG L FD M+L + I P ++HYGC++DL+GR+G+L EA++L+Q+MP+Q N
Sbjct: 479 TACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPN 538
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
V+W S+LSA +VH N+++ + AA +L ++ + YV + N+Y +++W D +KIR
Sbjct: 539 AVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRL 598
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ ++ G+S + VA +V+KF+ DRSHP I M+ ++ +LK GYSP SQ+
Sbjct: 599 MEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQI 658
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
DVDE+EK + L HS+KLAIAF L+ L+ P+ I +NLR+C DCH+ KLIS ++ R
Sbjct: 659 TVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNR 718
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRDR RFH F+ G CSC D+W
Sbjct: 719 EIIVRDRSRFHHFRGGVCSCNDFW 742
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 76/443 (17%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATC-ALSHWGSMDYACSIFRQIDEPG 95
T ++ + ++HA V G +P A++L+ +C + S + YA S+F ++
Sbjct: 8 TPGSVRQATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRM-PCS 66
Query: 96 AFDFNTLIRG-FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA-LKEGMQI 153
F F+T +R F + + LY M V PD FTF LFK CA+ A + G +
Sbjct: 67 TFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRML 126
Query: 154 HGHVFKVGFECDL-FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H F+ + + + +I+MY + A F + K V +W+ +I+ A GL
Sbjct: 127 HAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGL 186
Query: 213 WSECLKLFGE--MNNEKCWR----------------------------PEESILVSVLSA 242
+ +L + N W P+E ++ +LSA
Sbjct: 187 LDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSA 246
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG-------------------- 282
C L L+ G H + ++ + +LIDMY KCG
Sbjct: 247 CGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQP 306
Query: 283 --CLEKGLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ G C LF M D +T++ +I+G G+ +EAL +F++M R GL
Sbjct: 307 WNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRRHGL 366
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRAGMLGEA 389
D+ VG+L+A + G + +G +E R+V + G ++D+ + G + EA
Sbjct: 367 GADNFTMVGLLTASASLGALPQGRAL--HACIEQRLVERDVYLGTALLDMYMKCGRVEEA 424
Query: 390 LELIQSMPIQQNDV-VWRSLLSA 411
+ + M ++ DV W +++
Sbjct: 425 MVAFKQMSVR--DVHTWSAMIGG 445
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
S +V+ T++I K G L+ L + +T++ +ISG + G+ EA+ F+
Sbjct: 167 SVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFN 226
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVD 378
ML +G+ PD+V +G+LSAC +N G L+ RM + ++V ++D
Sbjct: 227 SMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVA------LID 280
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA-SKVHHNLEIGEIAAKNLF-QINSHHP 436
+ + G G A E+ ++ + W +++ KV H ++I A++LF Q+ H
Sbjct: 281 MYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGH-VDI----ARSLFDQMEDHDV 335
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
+ L Y R + + T+M GL + F++V
Sbjct: 336 ITFNSLITGYIHGGRLREALLLFTKMRRHGLG-ADNFTMV 374
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/582 (35%), Positives = 329/582 (56%), Gaps = 5/582 (0%)
Query: 26 NLRLKEQECLTILKTCKN--LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
N+ E T + +C + E K+ H + LK G ++ + + L+ S +
Sbjct: 119 NIFPNEYVIATAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQL--YSKCSDVGA 176
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A I + F +N ++ G ++ EA+ + + G+E +N T+ +F+ CA
Sbjct: 177 AIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCAS 236
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L+ + G Q+H + K +CD+++ +S+I+MYGKC V F ++ ++V SW++I
Sbjct: 237 LKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSI 296
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IAA+ N + E L LF +M + C P E + + ++ L AL LG H ++
Sbjct: 297 IAAYFQNEFFEEALNLFSKMEID-CIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSG 355
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
NV+V +LI MY K G + +F M +T++ +I+G + HG GKEALS+F
Sbjct: 356 LKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQ 415
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M+ G P+ V ++GV+ AC+H LV+EG F+ + ++RIVP ++HY C+V L+ R+
Sbjct: 416 DMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRS 475
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA ++S I + V WR+LL+A VH + + G A+ L Q+ Y+LLS
Sbjct: 476 GRLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLS 535
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
NM+AR +RW V +IR M + + + PG S +E+ + F S+D HP + IYE +
Sbjct: 536 NMHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVK 595
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
+ +++ GY PDI VL D+++++K + L HS+KLA+A+ L+ G+PI + +NLR
Sbjct: 596 DLLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLR 655
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
MC+DCHT KLIS + R I+VRD RFH F++G CSC DYW
Sbjct: 656 MCDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 13/311 (4%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGF---ECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
L K A + LK G IH H+ + + NSLIN+Y KC++V A +F M
Sbjct: 25 LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+++V SWSA++A + NG E +LF +M + P E ++ + +S+C ++ GK
Sbjct: 85 RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GK 143
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG +++ + V+ +LI +Y KC + + + + Y+++++GL H
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
EA+ + ++ EG+E ++ YV + C+ + G +M L+ I V
Sbjct: 204 HMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQM-LKSDIDCDVYIG 262
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF---Q 430
++D+ G+ G + + +N V W S+++A + E A NLF +
Sbjct: 263 SSIIDMYGKCGNVLSGRTFFDRLQ-SRNVVSWTSIIAAYFQNEFFE----EALNLFSKME 317
Query: 431 INSHHPSDYVL 441
I+ P++Y +
Sbjct: 318 IDCIPPNEYTM 328
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 342/577 (59%), Gaps = 23/577 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
IL++C E + H ++K GF ++ + L+ A G + A +F +
Sbjct: 16 ILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA--KVGDLKCAKRVFMGMPR 73
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
N +I K EEA L++ M ER ++ ++ ++ KL +
Sbjct: 74 RDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDINSA--- 126
Query: 154 HGHVFKVGFEC----DLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAIIAAHA 208
++ F+C D+ N++I+ Y K +++ A +F M ++ +W+ +I+A+
Sbjct: 127 -----RLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYV 181
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + + +F +M +E +P E +VS+LSAC HLGALD+G+ HG + ++V
Sbjct: 182 QCGEFGTAISMFQQMQSENV-KPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDV 240
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
++ +LIDMY KCG LE + +F ++ K ++ +I GL M+G+G+EA++ F M +E
Sbjct: 241 VLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKE 300
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PD V +VG+LS CSH+GL++ G F M Y + P V+HYGC+VDL+GRAG L E
Sbjct: 301 GIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKE 360
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
ALELI++MP++ N +V SLL A ++H + ++GE + L +++ +YV LSN+YA
Sbjct: 361 ALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYAS 420
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
RW DV R M +G++++PG S +EV V++FV+ D SHP + I + ++ +
Sbjct: 421 LSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKE 480
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
LK +G+ P+ + VL D++E+EK ++ HS+++A+AF L+ G IR+ +NLR C+DC
Sbjct: 481 LKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTCSDC 540
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H+ KLIS ++REIIVRDRKRFH F++G+CSC DYW
Sbjct: 541 HSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 18/292 (6%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M V P +F + ++CA + G H + K+GFE D+ +Q L++ Y K
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--NEKCWRPEESILVSV 239
++ A +F M ++ V + +A+I+A + +G E LF M N W S+
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWN-------SM 113
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVE-TSLIDMYVKCGCLEKGLCLFRMMAD-K 297
++ LG ++ + L+ + + + +V ++ID Y K L LF +M +
Sbjct: 114 ITCYCKLGDINSAR-----LMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSAR 168
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+T++ MIS G+ A+S+F +M E ++P +V V +LSAC+H G ++ G
Sbjct: 169 NSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIH 228
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++ + R+ V ++D+ + G L A+++ + ++N W S++
Sbjct: 229 GYIRTK-RLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS-RKNIFCWNSII 278
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/565 (36%), Positives = 308/565 (54%), Gaps = 36/565 (6%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTF 134
+H G MD A S+F + + +N +I G+ + +AL+ ++ M + PD FT
Sbjct: 239 AHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTI 298
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ--- 191
++ ACA L + G Q+H ++ + V N+LI+MY K VE A + +Q
Sbjct: 299 TSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVM 358
Query: 192 ------------------------------MDQKSVASWSAIIAAHASNGLWSECLKLFG 221
M + V +W+A+I + NG E ++LF
Sbjct: 359 ADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFR 418
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M P + +VLS C L L+ GK H IR++ + V S++ MY +
Sbjct: 419 LMIRSGP-EPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARS 477
Query: 282 GCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
G L +F R+ K +T++ MI LA HG G++A+ +F EMLR G++PD + +VGV
Sbjct: 478 GSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGV 537
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
LSAC+H G V+EG F +++ ++ IVP + HY C+VDL+ RAG+ EA E IQ MP++
Sbjct: 538 LSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEP 597
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
+ + W SLLSA +VH N ++ E+AA+ L I+ + Y LSN+Y+ RW D AKI
Sbjct: 598 DAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWK 657
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
K + + GFS + +V+ F + D HP D +Y +M +K G+ PD+
Sbjct: 658 RRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQS 717
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL DVD++ K E L HS+KLAIAF L+ + + +RI +NLR+CNDCHT K IS + +
Sbjct: 718 VLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVAD 777
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
REII+RD RFH FKDG CSC+DYW
Sbjct: 778 REIILRDATRFHHFKDGFCSCKDYW 802
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 192/424 (45%), Gaps = 79/424 (18%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
N F ++L++ A S G + A ++F ++ E + ++ G + F EA+ ++ +
Sbjct: 95 NVFTWNSLLSLYAKS--GRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLD 152
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G+ P FT + +CA +A G ++H V K+G + V NS++NMYGKC
Sbjct: 153 MVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGD 212
Query: 182 VEFASAIFKQMDQKSVA-------------------------------SWSAIIAAHASN 210
E A A+F++M ++SV+ SW+A+IA + N
Sbjct: 213 AETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQN 272
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-------- 262
GL ++ L F M + P+E + SVLSAC +LG + +GK H ++R+
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332
Query: 263 -------------------------ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
++ LNVI T+L++ YVK G ++ +F +M+++
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+ ++ MI G +G EA+ +F M+R G EP+ VLS C+ L C
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCA-------SLACL 445
Query: 358 DRMK-LEYRIVPTVQHYG-----CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ K + + + ++Q +V + R+G L A + + ++ V W S++ A
Sbjct: 446 EYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVA 505
Query: 412 SKVH 415
H
Sbjct: 506 LAQH 509
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 341/588 (57%), Gaps = 8/588 (1%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEFKKV---HAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E + E L++L C L E K+ HA V++ G N + A G
Sbjct: 264 ERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNAL-IAAYGRCGC 322
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFK 139
+ +AC +F I +N LI + E A+ L+ EM G +PD F+ +L
Sbjct: 323 LLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLL 382
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
AC L+ L G HG + + G E D F++ SL+++Y +C + A +F +++K S
Sbjct: 383 ACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVS 442
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKC--WRPEESILVSVLSACTHLGALDLGKCTHG 257
W+ +IA ++ NGL E L+LF EM ++K W P S L AC+ L A+ LGK H
Sbjct: 443 WNTMIAGYSQNGLPGESLQLFREMQSKKGGHW-PSLLAATSALVACSELPAVRLGKEMHC 501
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
++ + + +S+IDMY KCG ++ F + K ++++VMI+G A++G+GKE
Sbjct: 502 FALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKE 561
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A+ ++ +M REG+EPD Y+G+L AC HAG++ +GL F M+ +I ++HY CV+
Sbjct: 562 AVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVI 621
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
++ RAG +A+ L++ MP + + + S+LSA +H +E+G+ A L ++ H
Sbjct: 622 GMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAE 681
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVL SNMYA +++W ++ K+R + G+ + PG S +++A KVY FV+ + S P
Sbjct: 682 HYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHK 741
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
+ +M + +E +++ GY+PD + +L +++E+EK E L+ HS+K AIAF L+ + + +R
Sbjct: 742 VRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVR 801
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +N+RMC DCH KLIS + +REI+VRD+KRFH F+DG CSC DYW
Sbjct: 802 VFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 129/259 (49%), Gaps = 21/259 (8%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N L+ + +AL + + GV PD FT P K+C +G Q+H
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88
Query: 157 VFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG---- 211
K+G + D FV NSL++MYG+C +V+ A +F+ M +++ SW+A++AA A
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+ +CL+ G P+E+ LV+VL C L + G+ HG +++ V
Sbjct: 149 LFRDCLEDLGGTAA-----PDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVS 203
Query: 272 TSLIDMYVKCGCLEKGLCLFRMM---ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
L+DMY KCG + C F A + ++++VM+ G A +G+ A + EM E
Sbjct: 204 NVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQME 263
Query: 329 --GLEPDDVVYVGVLSACS 345
G+ D++ + VL CS
Sbjct: 264 ERGVPADEITMLSVLPVCS 282
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 331/575 (57%), Gaps = 28/575 (4%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C N L K VH+ +K F ++ L+ S G +D A +F ++
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM--YSKCGDLDGALRVFEKM 312
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + ++I G+ ++ + A+ L +M + GV+ D ++ ACA+ +L G
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H ++ E +LFV N+L++MY KC +E A+++F M K + SW+ +I
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------- 425
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
GE+ +P+ + VL AC L AL+ GK HG ++RN + + V
Sbjct: 426 ---------GEL------KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+D+YVKCG L LF M+ K ++++VMI+G MHG G EA++ F+EM G+E
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD+V ++ +L ACSH+GL+ +G F MK ++ I P ++HY C+VDL+ R G L +A E
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
++++PI + +W +LL + +H++E+ E A+ +F++ + YVLL+N+YA A++
Sbjct: 591 FMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS-QDRSHPAWDNIYEMIHQMEWQLK 510
W +V ++R ++ +GL ++PG S +E+ KV FVS + SHP NI ++ +M ++K
Sbjct: 651 WEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMK 710
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
EG+ P L + DE +K L GHS+KLA+AF L+ L IR+ +NLR+C DCH
Sbjct: 711 EEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 770
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S REI++RD RFH FKDG CSCR +W
Sbjct: 771 MAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 160/364 (43%), Gaps = 25/364 (6%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ + +N++I G+V E L +Y +M G++ D T ++ CA
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L G +H K FE + N+L++MY KC ++ A +F++M +++V SW+++
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA + +G +KL +M E + + + S+L AC G+LD GK H + N
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGV-KLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N+ V +L+DMY KCG +E +F M K ++++ MI
Sbjct: 383 MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---------------- 426
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
L+PD VL AC+ + G + L +VDL +
Sbjct: 427 -----ELKPDSRTMACVLPACASLSALERGKEIHGYI-LRNGYSSDRHVANALVDLYVKC 480
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G+LG A L +P D+V +++ A H IA N + P + +S
Sbjct: 481 GVLGLARLLFDMIP--SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 444 NMYA 447
+YA
Sbjct: 539 ILYA 542
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 163/375 (43%), Gaps = 55/375 (14%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R ID D+N I F + + E A+ L M ++ E + T+ ++ + CA L++
Sbjct: 60 RTIDHQ-VTDYNAKILHFCQLGDLENAMELIC-MCQKS-ELETKTYGSVLQLCAGLKSFT 116
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+G ++H + D + L++ Y C ++ +F M++K+V W+ +++ +A
Sbjct: 117 DGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 209 SNGLWSECLKLFGEMNNE--KCWRPEESI------------------------------- 235
G + E + LF M + + RPE +
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 236 -----------------LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
++SVL C + G L LGK H I++ + +L+DMY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG L+ L +F M ++ ++++ MI+G G+ A+ + +M +EG++ D V
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L AC+ +G ++ G D +K + + ++D+ + G + EA + S +
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYAKCGSM-EAANSVFSTMV 414
Query: 399 QQNDVVWRSLLSASK 413
++ + W +++ K
Sbjct: 415 VKDIISWNTMIGELK 429
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 323/554 (58%), Gaps = 10/554 (1%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F +PF ++ L+ A + G++ A +F + F +N L++ +EAL
Sbjct: 104 FRSDPFLSTRLIE--AYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALAR 161
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGM-----QIHGHVFKVGFECDLFVQNSLI 173
+M GV D++++ KAC + A ++H H + G+ V +LI
Sbjct: 162 LADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLI 221
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRPE 232
+ Y K V +A ++F M +++V SWSA+I +A N ++ ++LF +M ++ P
Sbjct: 222 DCYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPN 281
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+VSVL+AC + AL GK H ++R V V +L+ MY++CGCLE G +F+
Sbjct: 282 SITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFK 341
Query: 293 MMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ + + +++ +ISG MHG G EA+ +F EM+ G P + ++ VL ACSHAGLVN
Sbjct: 342 WIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVN 401
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG + F+ M +EY + P +HY C+VDL+GRAG L EA+ELI+SM I+ + VW +LL A
Sbjct: 402 EGKMLFESM-VEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQVWGALLGA 460
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
++H ++E EIA +LF + + +YVLL+++YARA+ V ++ + L +
Sbjct: 461 CRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLKELLEEHALEKVT 520
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G S +EV +K++ F S D +P + + +I + Q+K +GY PD VL D++ +EK
Sbjct: 521 GCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTGIVLYDIEGEEKE 580
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
L GHS+KLA+AF LI+ G IRI +NLR+C DCH+ TK IS EREI+VRD RF
Sbjct: 581 RILIGHSEKLAVAFGLINTCSGEVIRITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRF 640
Query: 592 HRFKDGTCSCRDYW 605
H F+DG CSC DYW
Sbjct: 641 HHFRDGVCSCGDYW 654
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 135/271 (49%), Gaps = 7/271 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++VHAH ++ G+ + A+ L+ A G + YA S+F + E ++ +I +
Sbjct: 199 REVHAHAIRRGYALHTHVATTLIDCYA--KLGIVRYAESVFAAMPERNVVSWSAMIGCYA 256
Query: 108 KEVEFEEALFLYNEMFERGVE--PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
K +A+ L+ +M + P++ T ++ ACA + AL G +H ++ + GF+
Sbjct: 257 KNERPADAIELFKDMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSL 316
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+ V N+L+ MY +C +E IFK + ++ V SW+++I+ + +G E +++F EM
Sbjct: 317 VSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMI 376
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + P +SVL AC+H G ++ GK S++ ++D+ + G L
Sbjct: 377 HVG-FSPSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYACMVDLLGRAGQL 435
Query: 285 EKGLCLFRMM-ADKCQLTYSVMISGLAMHGQ 314
++ + L R M + + ++ +HG
Sbjct: 436 DEAMELIRSMHIEPSPQVWGALLGACRIHGH 466
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 331/575 (57%), Gaps = 28/575 (4%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C N L K VH+ +K F ++ L+ S G +D A +F ++
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDM--YSKCGDLDGALRVFEKM 312
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + ++I G+ ++ + A+ L +M + GV+ D ++ ACA+ +L G
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGK 372
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H ++ E +LFV N+L++MY KC ++ A+++F M K + SW+ +I
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI------- 425
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
GE+ +P+ + +L AC L AL+ GK HG ++RN + + V
Sbjct: 426 ---------GEL------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+D+YVKCG L LF M+ K ++++VMISG MHG G EA++ F+EM G+E
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD+V ++ +L ACSH+GL+ +G F MK ++ I P ++HY C+VDL+ R G L +A E
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYE 590
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+++PI + +W +LL +++H++E+ E A+ +F++ + YVLL+N+YA A++
Sbjct: 591 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS-QDRSHPAWDNIYEMIHQMEWQLK 510
W +V ++R ++ KGL ++PG S +E+ KV FVS + SHP I ++ +M ++K
Sbjct: 651 WEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
EGY P L + DE +K L GHS+KLA+AF L+ L +R+ +NLR+C DCH
Sbjct: 711 EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHE 770
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S REI++RD RFH FK+G CSCR +W
Sbjct: 771 MAKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 160/364 (43%), Gaps = 25/364 (6%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ + +N++I G+V E L +Y +M G++ D T ++ CA
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L G +H K FE + N+L++MY KC ++ A +F++M +++V SW+++
Sbjct: 264 SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA + +G ++L +M E + + S+L AC G+LD GK H + N
Sbjct: 324 IAGYTRDGRSDGAIRLLQQMEKEGV-KLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
N+ V +L+DMY KCG ++ +F M K ++++ MI
Sbjct: 383 MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG---------------- 426
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
L+PD +L AC+ + G + L +VDL +
Sbjct: 427 -----ELKPDSRTMACILPACASLSALERGKEIHGYI-LRNGYSSDRHVANALVDLYVKC 480
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G+LG A L +P ++ V W ++S + H IA N + P + +S
Sbjct: 481 GVLGLARLLFDMIP-SKDLVSWTVMISGYGM-HGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 444 NMYA 447
+YA
Sbjct: 539 ILYA 542
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 172/384 (44%), Gaps = 64/384 (16%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
++L+ C K+L + KKVH+ + + LV ATC G + +F
Sbjct: 104 SVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATC-----GDLKEGRRVFD 158
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+++ + +N ++ + K +F+E++ L+ M E+G+E
Sbjct: 159 TMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE--------------------- 197
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
GK + E AS +F ++ + V SW+++I+ + S
Sbjct: 198 ---------------------------GK--RPESASELFDKLCDRDVISWNSMISGYVS 228
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
NGL L+++ +M + + ++SVL C + G L LGK H I++ +
Sbjct: 229 NGLTERGLEIYKQMMYLGI-DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRIN 287
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+DMY KCG L+ L +F M ++ ++++ MI+G G+ A+ + +M +EG
Sbjct: 288 FSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEG 347
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++ D V +L AC+ +G ++ G D +K + + ++D+ + G + A
Sbjct: 348 VKLDVVATTSILHACARSGSLDNGKDVHDYIKAN-NMESNLFVCNALMDMYTKCGSMDGA 406
Query: 390 LELIQSMPIQQNDVVWRSLLSASK 413
+ +M + ++ + W +++ K
Sbjct: 407 NSVFSTMVV-KDIISWNTMIGELK 429
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/575 (37%), Positives = 322/575 (56%), Gaps = 8/575 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK C F +++H ++K ++ F A LV A G +D A +F +
Sbjct: 311 SVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYA--KHGFLDDARKVFDFMP 368
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD--NFTFPALFKACAKLQALKEG 150
+N LI G + E L L++ M + G++ D T ++ K+ A +A+
Sbjct: 369 RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHT 428
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H K+G D V N LI+ Y KC ++++A +FK+ + S + ++ A +
Sbjct: 429 RQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQC 488
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ +KLF +M K P+ +L S+L+ACT L A + GK H LI+ +V
Sbjct: 489 DHGEDAIKLFVQML-RKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFA 547
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+ Y KCG +E F + ++ +++S MI GLA HG GK AL +F ML EG+
Sbjct: 548 GNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGV 607
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+ + VLSAC+HAGLV++ F+ MK + I T +HY C++D++GRAG L +A+
Sbjct: 608 APNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAM 667
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
EL+ +MP Q N VW +LL AS+VH + E+G +AA+ LF + +VLL+N YA A
Sbjct: 668 ELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAG 727
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W ++AK+R M + + P S VE+ KV+ F+ D+SHP +IY + ++ +
Sbjct: 728 MWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMN 787
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY P++ L DVD EK L HS++LA+AFALI G+PIR+ +NLR+C DCH
Sbjct: 788 KAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHV 847
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REII+RD RFH F +GTCSC DYW
Sbjct: 848 AFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI---- 91
+LK ++ +VHA + + F A+ LVA +G +D A +F +
Sbjct: 108 VVLKCAPDVRFGAQVHALAVATRLVHDVFVANALVAV--YGGFGMVDEARRMFDEYVGVG 165
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E A +NT+I +VK + +A+ ++ EM G P+ F F + AC + L+ G
Sbjct: 166 GERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGR 225
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+HG V + G+E D+F N+L++MY K +E A+ +F++M V SW+A I+ ++G
Sbjct: 226 QVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHG 285
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+L +M + P L SVL AC GA +LG+ HG +++ ++ + V
Sbjct: 286 HDHRALELLLQMKSSGLV-PNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVA 344
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
L+DMY K G L+ +F M + + ++ +ISG + G+ E LS+F M +EGL+
Sbjct: 345 VGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLD 404
Query: 332 PD 333
D
Sbjct: 405 LD 406
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 183/402 (45%), Gaps = 32/402 (7%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGF---FWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
L T ++L +H+H+LK G F N L + C L A ++F +
Sbjct: 10 ALARFGTSRSLFAGAHLHSHLLKSGLLAGFSNHLL--TLYSRCRLP-----SAARAVFDE 62
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
I +P +++L+ + +AL + M RGV + F P + K CA ++ G
Sbjct: 63 IPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVRFG 119
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM----DQKSVASWSAIIAA 206
Q+H D+FV N+L+ +YG V+ A +F + +++ SW+ +I+A
Sbjct: 120 AQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISA 179
Query: 207 HASNGLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
+ N + + +F EM W RP E V++ACT L+ G+ HG+++R
Sbjct: 180 YVKNDQSGDAIGVFREM----VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG 235
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+V +L+DMY K G +E +F M ++++ ISG HG AL +
Sbjct: 236 YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLL 295
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV--VDLMG 381
+M GL P+ VL AC+ AG N G M + V + V VD+
Sbjct: 296 QMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFM---VKAVADFDEFVAVGLVDMYA 352
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
+ G L +A ++ MP +++ ++W +L+S H+ GE+
Sbjct: 353 KHGFLDDARKVFDFMP-RRDLILWNALISGCS--HDGRHGEV 391
>gi|41052951|dbj|BAD07861.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 312
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/312 (56%), Positives = 227/312 (72%)
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M DK TYS M+SGLA+HG G++AL +F M+REG PD VYVGVL+ACS AGL+ EG
Sbjct: 1 MDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREGHRPDAAVYVGVLNACSRAGLLEEG 60
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
L CFDRM+LE+++ P QHYGC+VDLM RAG L +A LI SMP D WRSLL+A +
Sbjct: 61 LRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTDTAWRSLLNACR 120
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
+H NLE+ E A + L ++ + + DY++LS+M+ARA A RTE +GL Q+PG+
Sbjct: 121 IHGNLELAERALQELERLGATNAGDYIILSDMHARAHNRDAAAARRTEAVDRGLAQAPGY 180
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S VEV ++FVSQDRSHP D+IYEM+HQMEWQL+FEGY+PD S++ D E+EKR
Sbjct: 181 SAVEVHGATHRFVSQDRSHPRADDIYEMLHQMEWQLRFEGYTPDTSELALDAGEEEKRRV 240
Query: 534 LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHR 593
+ HSQKLA+AF L+ +G+P+R+ NLRM +CH Y+ LIS I+ REI+VRDR RFHR
Sbjct: 241 VAAHSQKLAMAFGLLSTPEGAPVRVVTNLRMSKECHAYSALISEIFGREIVVRDRNRFHR 300
Query: 594 FKDGTCSCRDYW 605
FK G CSCR+YW
Sbjct: 301 FKRGACSCRNYW 312
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 4/158 (2%)
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
MD K+ ++SA+++ A +G + L++F M E RP+ ++ V VL+AC+ G L+
Sbjct: 1 MDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVREG-HRPDAAVYVGVLNACSRAGLLEE 59
Query: 252 G-KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGL 309
G +C + + N ++D+ + G L+ L M + +++
Sbjct: 60 GLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLDDARALIGSMPTGPTDTAWRSLLNAC 119
Query: 310 AMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSH 346
+HG + A E+ R G D + + + A +H
Sbjct: 120 RIHGNLELAERALQELERLGATNAGDYIILSDMHARAH 157
>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 641
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/551 (36%), Positives = 317/551 (57%), Gaps = 12/551 (2%)
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
C+ N + + + A +F ++ + F ++ L+ G+ + + E AL LY M
Sbjct: 94 ICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQ 153
Query: 124 ERGVEPDN------FTFPALFKACAKLQALKEGMQIHGHVFKVGFEC---DLFVQNSLIN 174
E EP N FT + A A + + G ++H HV + G + D + ++L +
Sbjct: 154 E---EPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALAD 210
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY KC +V+ A +F +M + SW+A++ + G E +LF M + RP E
Sbjct: 211 MYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEF 270
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
VL AC G+ HG + ++ + + E++L+ MY KCG + + +F M
Sbjct: 271 TYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAM 330
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
A ++++ +ISG A +GQ +EAL F LR G++PD V +VGVLSAC+HAGLV++GL
Sbjct: 331 AKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGL 390
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
F +K +Y I T HY CV+DL+ R+G A ++I +M ++ N +W SLL ++
Sbjct: 391 EIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRI 450
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H N+ + AA+ LF+I +P+ YV L+N+YA + +V +R M SKG+ + P S
Sbjct: 451 HKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASS 510
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+EV R+V+ F+ D+SHP D IY ++ ++ ++ EGY DI VL DV++++K + +
Sbjct: 511 WIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDI 570
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS++LA+AF +I +GSPI++ +NLR+C DCH KLIS I +R+IIVRD RFH F
Sbjct: 571 GYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHF 630
Query: 595 KDGTCSCRDYW 605
KDG CSCRDYW
Sbjct: 631 KDGICSCRDYW 641
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 318/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILK C F +++H ++K + + LV A +H+ +D A +F +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDARKVFDWMF 365
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
N LI G +EAL L+ E+ + G+ + T A+ K+ A L+A Q
Sbjct: 366 HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQ 425
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K+GF D V N LI+ Y KC + A+ +F++ + + +++I A +
Sbjct: 426 VHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDH 485
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+KLF EM K P+ +L S+L+AC L A + GK H LI+ +
Sbjct: 486 GEGAIKLFMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ Y KCG +E F + ++ +++S MI GLA HG GK AL +F M+ EG+ P
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + VL AC+HAGLV+E F+ MK + I T +HY C++DL+GRAG L +A+EL
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ SMP Q N +W +LL AS+VH + E+G++AA+ LF + +VLL+N YA A W
Sbjct: 665 VNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VAK+R M + + P S +EV KV+ F+ D+SHP IY + ++ +
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKA 784
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
G+ P++ L D+D EK L HS++LA+AFAL+ G+PIR+ +NLR+C DCH
Sbjct: 785 GFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAF 844
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REII+RD RFH F+DGTCSC DYW
Sbjct: 845 KFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 162/311 (52%), Gaps = 4/311 (1%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID-EP 94
+LK + +VHA + GF + F A+ LVA +G MD A +F + D E
Sbjct: 108 VVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFNEADSER 165
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A +N L+ +VK + +A+ ++ EM G++P F F + AC + ++ G Q+H
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V ++G++ D+F N+L++MY K +V+ AS IF++M V SW+A+I+ NG
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
++L +M P L S+L AC+ GA DLG+ HG +I+ + + + L
Sbjct: 286 RAIELLLQMKYSG-LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY K L+ +F M + + + +ISG + G+ EALS+F E+ +EGL +
Sbjct: 345 VDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNR 404
Query: 335 VVYVGVLSACS 345
VL + +
Sbjct: 405 TTLAAVLKSTA 415
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 134/271 (49%), Gaps = 11/271 (4%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F +I +P +++L+ + A+ ++ M GV + F P + K +
Sbjct: 59 VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPD 115
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIA 205
+ G Q+H GF D+FV N+L+ MYG ++ A +F + D +++ SW+ +++
Sbjct: 116 ARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMS 175
Query: 206 AHASNGLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
A+ N + +++FGEM W +P E V++ACT ++ G+ H ++R
Sbjct: 176 AYVKNDQCGDAIQVFGEM----VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRM 231
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+V +L+DMY+K G ++ +F M D ++++ +ISG ++G A+ +
Sbjct: 232 GYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELL 291
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+M GL P+ +L ACS AG + G
Sbjct: 292 LQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 11/272 (4%)
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A QAL G +H + K G +N LI+ Y KC + A +F ++ SWS
Sbjct: 15 AAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWS 72
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+++ A+++NGL ++ F M E E ++ V+ C + LG H +
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL--PVVLKC--VPDARLGAQVHAMAMA 128
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALS 320
+V V +L+ MY G ++ +F +++ ++++ ++S + Q +A+
Sbjct: 129 TGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQ 188
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM+ G++P + + V++AC+ + + G M + V +VD+
Sbjct: 189 VFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH-AMVVRMGYDKDVFTANALVDMY 247
Query: 381 GRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
+ G + A + + MP +DVV W +L+S
Sbjct: 248 MKMGRVDIASVIFEKMP--DSDVVSWNALISG 277
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/616 (33%), Positives = 351/616 (56%), Gaps = 39/616 (6%)
Query: 18 EPPKGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---A 71
+ PK P+L LR ++L+ C K++++ +++H+ + + S LV
Sbjct: 93 QSPK-PDLELRTY----CSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYV 147
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV---- 127
TC G + IF ++ F +N L+ G+ K F E+L L+ M E G+
Sbjct: 148 TC-----GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVE 202
Query: 128 ----------EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL--------FVQ 169
+ D ++ ++ ++G+ + + +G DL +
Sbjct: 203 SARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLN 262
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N L++MY K + A +F+ M ++SV SW+++IA +A GL ++LF EM E +
Sbjct: 263 NCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLF 322
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P + +L AC L AL+ G+ HG ++RN +L+ V +L+DMY+KCG L
Sbjct: 323 -PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF M+ +K ++++VMI+G MHG G EA++ F+EM G+EPD+V ++ +L ACSH+GL
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++EG F+ M+ I P +HY C+VDL+ RAG L +A + I+ MPI+ + +W +LL
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
+++H++++ E A+++F++ + YVLL+N+YA A++W +V K+R + +GL +
Sbjct: 502 CGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRK 561
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
+PG S +E+ KV+ FV+ D SHP + I ++ + ++K EG+ P + L D+ E
Sbjct: 562 NPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTE 621
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K L GHS+K+A+AF ++ L G +R+ +NLR+C DCH K +S + +R+II+RD
Sbjct: 622 KEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSN 681
Query: 590 RFHRFKDGTCSCRDYW 605
RFH FKDG+CSCR +W
Sbjct: 682 RFHHFKDGSCSCRGHW 697
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/609 (36%), Positives = 338/609 (55%), Gaps = 44/609 (7%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV--ATCALSHWGSMDYACSIFRQIDEP 94
+L L +++HA V+ N ++L+ CA +H A +F P
Sbjct: 80 LLNQRPKLSPLQQIHAQVVTQALSSNASLTASLIHCYLCAKNH----PNARILFDHYPSP 135
Query: 95 GAFD--FNTLIRGFVKEVEFEEALFLYNEMFERG----VEPDNFTFPALFKACAKLQALK 148
+N +IR + K +E + L+ M V PD +TF + +C+ +L
Sbjct: 136 SPPIKLWNVMIRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLI 195
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +HG V K GFE +L+V NS+INM ++E A +F QM ++ V SW++++ +A
Sbjct: 196 YGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYA 255
Query: 209 SNGLWSECLKLFGEM--NNEKCW-----------------------------RPEESILV 237
+G +LF M N+ W P E++LV
Sbjct: 256 KHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLV 315
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
VLSAC HLGALD G H + + + + T+LIDMY KCG ++ +F + +
Sbjct: 316 CVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKR 375
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
L+++ MISGL+ HG GK+AL +F +ML E + P+++ +GVL+ CSH+GLV EG
Sbjct: 376 DVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSIL 435
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M+ + I P ++HYGC +DL+GRAG L ALE++++MP++ + V+WR+LLSAS++HHN
Sbjct: 436 ANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHN 495
Query: 418 LEIGEIAAKNLFQI-NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
+ +GE ++ Q+ +S H VLLSN+YA RW V ++R M + SPG S +
Sbjct: 496 VNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWI 555
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
EV V++F D+ HP I ++++ +L GYS + QV D++E+EK + +
Sbjct: 556 EVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEEKEQAVAW 615
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLAIAF L+ G+ IRI +NLR C DCH+ K IS +Y REI+VRDR RFH F +
Sbjct: 616 HSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRSRFHTFIE 675
Query: 597 GTCSCRDYW 605
G CSC+D+W
Sbjct: 676 GDCSCKDFW 684
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/562 (36%), Positives = 318/562 (56%), Gaps = 9/562 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCA-SNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
K++H LK G ++ F S C G AC++F ++ + +N I
Sbjct: 128 KQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGD---ACNMFDEMPQRNLATWNAYISNA 184
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
V++ +A+ + E EP++ TF A AC + L G Q+H + + G++ D+
Sbjct: 185 VQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDV 244
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
V N LI+ YGKC + A +F ++ ++K+V SW +++AA N +F +
Sbjct: 245 SVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK 304
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E P + ++ SVLSAC LG L+LG+ H ++ N+ V ++L+DMY KCG +E
Sbjct: 305 EV--EPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIE 362
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML--REGLEPDDVVYVGVLSA 343
+F + ++ +T++ MI G A G AL +F EM G+ P V + +LS
Sbjct: 363 NAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSV 422
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CS G V G+ F+ M+L Y I P +H+ CVVDL+GR+G++ A E IQ+M IQ
Sbjct: 423 CSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTIS 482
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
VW +LL A ++H E+G+IAA+ LF+++ ++V+LSNM A A RW + +R EM
Sbjct: 483 VWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMK 542
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
G+ ++ G+S + V +++ F ++D SH I M+ ++ +K GY PD + L
Sbjct: 543 DIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLF 602
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++++EK + HS+K+A+AF LI L QG PIRI +NLR+C DCH+ K IS I REI
Sbjct: 603 DLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREI 662
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFHRFKDG CSC+DYW
Sbjct: 663 IVRDNHRFHRFKDGCCSCKDYW 684
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 23/406 (5%)
Query: 48 KKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
+ +HAH+++ P F +++LV S ++ A + + +LI G
Sbjct: 26 RTIHAHIIRTHVTPLPSFLSNHLVNM--YSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
V F AL + M V+P++FTFP +FKA A +Q G QIHG K G D+
Sbjct: 84 VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE---M 223
FV S +MY K A +F +M Q+++A+W+A I+ + + + F E +
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ E P + L+AC + L+LG+ H ++R +V V LID Y KCG
Sbjct: 204 HGE----PNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGD 259
Query: 284 LEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ +F + + K +++ M++ L + + + A +F + +E +EP D + VLS
Sbjct: 260 IVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLS 318
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
AC+ G + G + ++ + + +VD+ G+ G + A ++ +P ++N
Sbjct: 319 ACAELGGLELG-RSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELP-ERNL 376
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQ---INSH--HPSDYVLLS 443
V W +++ ++++ A LF+ + SH PS L+S
Sbjct: 377 VTWNAMIGGYAHQGDIDM----ALRLFEEMTLGSHGIRPSYVTLIS 418
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 335/574 (58%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C +L + K ++ ++LK GF + L+ A G M A +F ++
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA--KCGDMITARDVFNSME 369
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I G+++ + EA+ L+ M + D+ T+ L +L LK G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K G DL V N+LI+MY KC +V + IF M +W+ +I+A G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ L++ +M + P+ + + L C L A LGK H L+R + +
Sbjct: 490 FATGLQVTTQMRKSEVV-PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI+MY KCGCLE +F M+ + +T++ MI M+G+G++AL F++M + G+ P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D VV++ ++ ACSH+GLV+EGL CF++MK Y+I P ++HY CVVDL+ R+ + +A E
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ+MPI+ + +W S+L A + ++E E ++ + ++N P +L SN YA ++W
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
V+ IR + K + ++PG+S +EV + V+ F S D S P + IY+ + + + E
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 513 GYSPDISQVLRDVDEDEKRERLK-GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD +V ++++E+E++ RL GHS++LAIAF L++ G+P+++ +NLR+C DCH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS I REI+VRD RFH FKDGTCSC+D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 197/377 (52%), Gaps = 11/377 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP-GA 96
L + NL E +++HA V+ G + F + L+ SH+ + S+FR++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDK--YSHFREPASSLSVFRRVSPAKNV 71
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+ +N++IR F K F EAL Y ++ E V PD +TFP++ KACA L + G ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ +GFE DLFV N+L++MY + + A +F +M + + SW+++I+ ++S+G + E
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 217 LKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+++ E+ N W P+ + SVL A +L + G+ HG +++ V+V L+
Sbjct: 192 LEIYHELKNS--WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY+K +F M + ++Y+ MI G +E++ +F E L + +PD +
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLL 308
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
VL AC H ++ ++ M K + + TV++ ++D+ + G + A ++
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFN 366
Query: 395 SMPIQQNDVVWRSLLSA 411
SM ++ V W S++S
Sbjct: 367 SMEC-KDTVSWNSIISG 382
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 174/366 (47%), Gaps = 15/366 (4%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F ++D + +NT+I G++K EE++ ++ E ++ +PD T ++ +AC L+
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRD 322
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L I+ ++ K GF + V+N LI++Y KC + A +F M+ K SW++II+
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ +G E +KLF M + + + + ++S T L L GK H + I++ +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIME-EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ V +LIDMY KCG + L +F M +T++ +IS G L + ++M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 327 REGLEPDDVVYVGVLSACSHAG---LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+ + PD ++ L C+ L E C R E + Q ++++ +
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL----QIGNALIEMYSKC 557
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH--PSDYVL 441
G L + + + M +++ V W ++ A ++ GE A + + P V
Sbjct: 558 GCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVF 613
Query: 442 LSNMYA 447
++ +YA
Sbjct: 614 IAIIYA 619
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD- 193
P + +A + L E +IH V +G + F LI+ Y + + ++F+++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
K+V W++II A + NGL+ E L+ +G++ K P++ SV+ AC L ++G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKV-SPDKYTFPSVIKACAGLFDAEMGD 126
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
+ ++ ++ V +L+DMY + G L + +F M + ++++ +ISG + HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+EAL I+ E+ + PD VL A + +V +G
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/573 (36%), Positives = 318/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILK C F +++H ++K + + LV A +H+ +D A +F +
Sbjct: 308 SILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDARKVFDWMF 365
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
N LI G +EAL L+ E+ + G+ + T A+ K+ A L+A Q
Sbjct: 366 HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQ 425
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K+GF D V N LI+ Y KC + A+ +F++ + + +++I A +
Sbjct: 426 VHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDH 485
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+KLF EM K P+ +L S+L+AC L A + GK H LI+ +
Sbjct: 486 GEGAIKLFMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ Y KCG +E F + ++ +++S MI GLA HG GK AL +F M+ EG+ P
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + VL AC+HAGLV+E F+ MK + I T +HY C++DL+GRAG L +A+EL
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ SMP Q N +W +LL AS+VH + E+G++AA+ LF + +VLL+N YA A W
Sbjct: 665 VNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMW 724
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VAK+R M + + P S +EV KV+ F+ D+SHP IY + ++ +
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKA 784
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
G+ P++ L D+D EK L HS++LA+AFAL+ G+PIR+ +NLR+C DCH
Sbjct: 785 GFVPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAF 844
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REII+RD RFH F+DGTCSC DYW
Sbjct: 845 KFISKIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 162/311 (52%), Gaps = 4/311 (1%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID-EP 94
+LK + +VHA + GF + F A+ LVA +G MD A +F + D E
Sbjct: 108 VVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFNEADSER 165
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A +N L+ +VK + +A+ ++ EM G++P F F + AC + ++ G Q+H
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V ++G++ D+F N+L++MY K +V+ AS IF++M V SW+A+I+ NG
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
++L +M P L S+L AC+ GA DLG+ HG +I+ + + + L
Sbjct: 286 RAIELLLQMKYSG-LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY K L+ +F M + + + +ISG + G+ EALS+F E+ +EGL +
Sbjct: 345 VDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNR 404
Query: 335 VVYVGVLSACS 345
VL + +
Sbjct: 405 TTLAAVLKSTA 415
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 133/270 (49%), Gaps = 11/270 (4%)
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F +I +P +++L+ + A+ ++ M GV + F P + K +
Sbjct: 60 FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDA 116
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ G Q+H GF D+FV N+L+ MYG ++ A +F + D +++ SW+ +++A
Sbjct: 117 RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176
Query: 207 HASNGLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
+ N + +++FGEM W +P E V++ACT ++ G+ H ++R
Sbjct: 177 YVKNDQCGDAIQVFGEM----VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG 232
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+V +L+DMY+K G ++ +F M D ++++ +ISG ++G A+ +
Sbjct: 233 YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLL 292
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+M GL P+ +L ACS AG + G
Sbjct: 293 QMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 123/272 (45%), Gaps = 11/272 (4%)
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A QAL G +H + K G +N LI+ Y KC + A F ++ SWS
Sbjct: 15 AAAQALLPGAHLHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWS 72
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+++ A+++NGL ++ F M E E + V+ C + LG H +
Sbjct: 73 SLVTAYSNNGLPRSAIQAFHGMRAEGVCCNE--FALPVVLKC--VPDARLGAQVHAMAMA 128
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALS 320
+V V +L+ MY G ++ +F +++ ++++ ++S + Q +A+
Sbjct: 129 TGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQ 188
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM+ G++P + + V++AC+ + + G M + V +VD+
Sbjct: 189 VFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMY 247
Query: 381 GRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
+ G + A + + MP +DVV W +L+S
Sbjct: 248 MKMGRVDIASVIFEKMP--DSDVVSWNALISG 277
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/574 (37%), Positives = 325/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ L C N E E K VHA ++ GF + LV G M A + + +
Sbjct: 1154 SALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTM--YGKLGMMMEAKKVLQTMP 1211
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGM 151
+P +N LI G + E EA+ Y + E+G+ + T ++ AC A LK GM
Sbjct: 1212 QPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGM 1271
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH H+ GFE D +V+NSLI MY KC + ++ IF + KS +W+A++AA+A +G
Sbjct: 1272 PIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHG 1331
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E LK+FGEM N ++ L+A +L L+ G+ HG +I+ ++ V
Sbjct: 1332 CGEEALKIFGEMRNVGV-NLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVT 1390
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ +DMY KCG + L + ++ +L+++++IS A HG ++A F EML+ G +
Sbjct: 1391 NAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 1450
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V +V +LSAC+H GLV+EGL +D M E+ + P ++H C++DL+GR+G L A
Sbjct: 1451 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEG 1510
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+ MP+ ND+ WRSLL+A ++H NLE+ A++L +++ S YVL SN+ A + +
Sbjct: 1511 FIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 1570
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R EM S + + P S V++ KV+ F ++ HP I + ++ K
Sbjct: 1571 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 1630
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD S L D+DE++K L HS++LA+AF LI+ + S +RI +NLR+C DCH+
Sbjct: 1631 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1690
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S I R+I++RD RFH F G CSC DYW
Sbjct: 1691 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 239/450 (53%), Gaps = 7/450 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ L+ C +L +V + K F N F S LV S G M+ A +F +
Sbjct: 136 SALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDF--HSKCGKMEDASYLFGTMM 193
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N +I G+ + +++ ++ M G+ PD +T ++ +A A+ L Q
Sbjct: 194 ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQ 253
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IHG + ++G+ V LIN Y K + A + K M +K + S +A+I +A G+
Sbjct: 254 IHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 313
Query: 213 WS-ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+S + L LF EMN ++ IL S+L+ C +L + LG H ++ + +V +
Sbjct: 314 YSVDALDLFKEMNQMNIGM-DDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMG 372
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LIDMY K G +E F M +K ++++ +ISG A HG G A+S++ +M +G +
Sbjct: 373 NALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFK 432
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+DV ++ +L ACSH GL EG CF+ M +Y I P +HY C+VDL R G+L EA
Sbjct: 433 PNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYN 492
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
L+ + I+ N +W ++L AS ++ + +G+ AA NLF + + +YV+L+++Y+ A
Sbjct: 493 LLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGL 552
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
W D KIR M + ++ G+S + +K
Sbjct: 553 WDDAWKIRKLMEERSTKKNAGYSFFQATKK 582
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 199/426 (46%), Gaps = 14/426 (3%)
Query: 28 RLKEQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
RL L IL+ C + + K+ +H H++ GF + + L+ G + A
Sbjct: 27 RLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYV--KVGDVIAA 84
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++F + E + ++ G+ + FE+A L+++M GV+ + FT+ + +AC L
Sbjct: 85 RNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSL 144
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ L G+Q+ G + K F +LFV+++L++ + KC K+E AS +F M ++ V SW+A+I
Sbjct: 145 RCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMI 204
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+A G + +F M P+ L SVL A G L + HG + +
Sbjct: 205 GGYAVQGFADDSFCMFRSM-LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 263
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG-QGKEALSIFS 323
IV LI+ Y K G L L + M K + + +I+G A G +AL +F
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFK 323
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EM + + DDV+ +L+ C++ G L+Y+ V ++D+ ++
Sbjct: 324 EMNQMNIGMDDVILCSMLNICANLASFALGTQ-IHAFALKYQPSYDVAMGNALIDMYAKS 382
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH--HPSDYVL 441
G + +A M ++N + W SL+S H G +A ++ S P+D
Sbjct: 383 GEIEDAKRAFDEME-EKNVISWTSLISGYAKH---GYGHMAVSLYKKMESKGFKPNDVTF 438
Query: 442 LSNMYA 447
LS ++A
Sbjct: 439 LSLLFA 444
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 6/374 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
NL+ + +H V+K G N C N + T S G + A +F+ + E +N++
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSN-VCICNTLLTL-YSEAGRSEDAELVFQAMTERDLISWNSM 1120
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ +V++ + + L + E+ + G ++ TF + AC+ + L E +H + GF
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 1180
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
L V N+L+ MYGK + A + + M Q +W+A+I HA N +E +K + +
Sbjct: 1181 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY-K 1239
Query: 223 MNNEKCWRPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+ EK +VSVL AC+ L G H ++ + V+ SLI MY KC
Sbjct: 1240 LIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKC 1299
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G L +F + +K +T++ M++ A HG G+EAL IF EM G+ D + G L
Sbjct: 1300 GDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGL 1359
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+A ++ ++ EG + ++ + +D+ G+ G + + L+++ PI ++
Sbjct: 1360 AATANLAVLEEGQQ-LHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRS 1417
Query: 402 DVVWRSLLSASKVH 415
+ W L+SA H
Sbjct: 1418 RLSWNILISAFARH 1431
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 187/379 (49%), Gaps = 29/379 (7%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNT 101
+E +VH V+K G + + V T + +GS+ A +F ++ + + +
Sbjct: 863 DEGFQVHGFVVKTGILGDVY-----VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTS 917
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+ G+ E L +Y M + GV + TF + +C L+ G Q+ GH+ + G
Sbjct: 918 LMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYG 977
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
FE + V NSLI+M+ VE A +F M++ + SW+A+I+A+A +GL E L+ F
Sbjct: 978 FEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH 1037
Query: 222 EM---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
M +NE + L S+LS C+ + L G+ HG +++ NV + +L+ +Y
Sbjct: 1038 WMRHLHNET----NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLY 1093
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+ G E +F+ M ++ ++++ M++ G+ + L I +E+L+ G + V +
Sbjct: 1094 SEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFA 1153
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY------GCVVDLMGRAGMLGEALEL 392
L+ACS+ C K+ + ++ + +V + G+ GM+ EA ++
Sbjct: 1154 SALAACSNPE-------CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+Q+MP Q + V W +L+
Sbjct: 1207 LQTMP-QPDRVTWNALIGG 1224
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 133/251 (52%), Gaps = 2/251 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S +G++++A +F ++ ++T++ G+V+ +EEA+ L+ +M+ GVEP+ F
Sbjct: 790 SKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVA 849
Query: 136 ALFKACAKLQAL-KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+L AC++ + EG Q+HG V K G D++V +L++ YG V A +F++M
Sbjct: 850 SLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 909
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+V SW++++ ++ +G E L ++ M E ++ +V S+C L LG
Sbjct: 910 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV-SGNQNTFATVTSSCGLLEDQVLGYQ 968
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
G +I+ +V V SLI M+ +E+ +F M + ++++ MIS A HG
Sbjct: 969 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 1028
Query: 315 GKEALSIFSEM 325
+E+L F M
Sbjct: 1029 CRESLRCFHWM 1039
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 22/312 (7%)
Query: 116 LFLYNEMFERGVEPDN-FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
+FL + + G+ N FP K +++ + G +H +F N+LIN
Sbjct: 730 VFLQQQHTDYGIRCLNAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLIN 787
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW----R 230
MY K +E A +F +M ++ ASWS +++ + GL+ E + LF +M W
Sbjct: 788 MYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM-----WGLGVE 842
Query: 231 PEESILVSVLSACTHLGAL-DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P ++ S+++AC+ G + D G HG +++ +V V T+L+ Y G +
Sbjct: 843 PNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 902
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF M D ++++ ++ G + G E L+++ M +EG+ + + V S+C GL
Sbjct: 903 LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GL 959
Query: 350 VNEGLLCFDRMK--LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WR 406
+ + +L + + ++Y +V ++ + + EA + M + D++ W
Sbjct: 960 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHM--NECDIISWN 1017
Query: 407 SLLSASKVHHNL 418
+++SA HH L
Sbjct: 1018 AMISA-YAHHGL 1028
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/656 (32%), Positives = 348/656 (53%), Gaps = 101/656 (15%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID-- 92
+++L+ CK++ + K++H+H +K G +P + ++A C G+M+YA +F I
Sbjct: 11 ISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHP 70
Query: 93 ---------------------------------EPGAFDFNTLIRGFVKEVEFEEALFLY 119
+P F F ++GF +++ + L
Sbjct: 71 SMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELL 130
Query: 120 NEMFERGVEPDNFTFPA------------------------------------------- 136
N + G + + F A
Sbjct: 131 NHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFK 190
Query: 137 ------LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI-NMYGKCEKVEFASAIF 189
+ AC+KL+ L+ G H+FK ++ ++ +M+ C +++ A +F
Sbjct: 191 ISKMLLVLSACSKLKDLEWG----KHIFK-------YINGGIVEHMFAACGEMDEAQGVF 239
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
M + V SW+A+I + + L LF EM +P+E +VS+L AC LGAL
Sbjct: 240 DNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNV-KPDEFTMVSILIACALLGAL 298
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
+LG+ + +N + + V +L+DMY KCG + K +F+ M K + T++ MI GL
Sbjct: 299 ELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGL 358
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
A++G G+EAL++FS M+ + PD++ Y+GVL AC +V++G F M +++ I PT
Sbjct: 359 AINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPT 414
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
V HYGC+VDL+G G L EALE+I +MP++ N +VW S L A +VH N+++ ++AAK +
Sbjct: 415 VTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQIL 474
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD 489
++ + + YVLL N+YA +++W ++ ++R M +G+ ++PG SL+E+ VY+FV+ D
Sbjct: 475 ELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGD 534
Query: 490 RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH 549
+SHP IY + M L GYSPD S+V D+ E++K L HS+KLAIA+ALI
Sbjct: 535 QSHPQSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALIS 594
Query: 550 LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G IRI +NLRMC DCH KL+S Y RE+IV+D+ RFH F+ G+CSC ++W
Sbjct: 595 SGPGVTIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 336/610 (55%), Gaps = 45/610 (7%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
+IL C K+L+ K +H +K G + F + NL A C + A ++F
Sbjct: 348 SILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCL-----CVREAQTVFD 402
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ +N+L +V ++ L ++ EM GV+PD T ++ AC+ LQ LK
Sbjct: 403 LMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKS 462
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IHG + G D+FV N+L+++Y KC V A +F + + VASW+ I+ A+ +
Sbjct: 463 GKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFT 522
Query: 210 NGLWSECLKLFGEMN------NEKCW----------------------------RPEESI 235
N + + L +F +MN +E W +P+E+
Sbjct: 523 NKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETT 582
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
+ S+L AC+ L +GK H + R+ ++ +L+DMY KCG L +F MM
Sbjct: 583 IYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMP 642
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
K +++ MI MHG GKEALS+F +ML ++PD + VLSACSH+ LV EG+
Sbjct: 643 IKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQ 702
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+ M ++ + P +HY CVVD+ RAG L EA IQ MP++ + W++ L+ +V+
Sbjct: 703 IFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVY 762
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N+E+ +I+AK LF+I+ + ++YV L N+ A+ W + +KIR M +G+ ++PG S
Sbjct: 763 KNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSW 822
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
V +V+ FV+ D+S+ D IY + ++ ++K GY PD VL D+D++EK E L
Sbjct: 823 FHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLC 882
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLA+AF +++L+ S IR+ +NLR+C DCH K +S + I+VRD RFH FK
Sbjct: 883 NHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFK 942
Query: 596 DGTCSCRDYW 605
+G CSC+D+W
Sbjct: 943 NGNCSCKDFW 952
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 164/316 (51%), Gaps = 12/316 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
+IL C +L++ K ++H V++ G + F +S N A C + A ++F
Sbjct: 146 SILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCL-----CVREAQTVFD 200
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ +N+L +V ++ L ++ EM GV+PD T + AC+ LQ LK
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IHG K G ++FV N+L+N+Y C V A A+F M ++V +W+++ + + +
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVN 320
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
G + L +F EM +P+ + S+L AC+ L L GK HG +++ +V
Sbjct: 321 CGFPQKGLNVFREMGLNGV-KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVF 379
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+L+++Y C C+ + +F +M + +T++ + S G ++ L++F EM+ G
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG 439
Query: 330 LEPDDVVYVGVLSACS 345
++PD V + +L ACS
Sbjct: 440 VKPDLVTMLSILHACS 455
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 158/324 (48%), Gaps = 3/324 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F + +N+L +V ++ L ++ +M V+ + T ++ C+ LQ
Sbjct: 97 VFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQD 156
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
LK G +IHG V + G D+FV ++ +N Y KC V A +F M + V +W+++ +
Sbjct: 157 LKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSC 216
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ + G + L +F EM + +P+ + +LSAC+ L L GK HG +++
Sbjct: 217 YVNCGFPQKGLNVFREMVLDGV-KPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE 275
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
NV V +L+++Y C C+ + +F +M + +T++ + S G ++ L++F EM
Sbjct: 276 NVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMG 335
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G++PD + +L ACS + G +++ +V V +V+L +
Sbjct: 336 LNGVKPDPMAMSSILPACSQLKDLKSGKT-IHGFAVKHGMVEDVFVCTALVNLYANCLCV 394
Query: 387 GEALELIQSMPIQQNDVVWRSLLS 410
EA + MP +N V W SL S
Sbjct: 395 REAQTVFDLMP-HRNVVTWNSLSS 417
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 149/298 (50%), Gaps = 3/298 (1%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
EA+ +Y RG++PD F A+ KACA + + Q H + G D+ + N+
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
I+ YGKC+ VE A +F + + V +W+++ A + + G + L +F +M K +
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV-KAN 140
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+ S+L C+ L L GK HG ++R+ +V V ++ ++ Y KC C+ + +F
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFD 200
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+M + +T++ + S G ++ L++F EM+ +G++PD V +LSACS +
Sbjct: 201 LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
G L++ +V V +V+L + EA + MP +N + W SL S
Sbjct: 261 G-KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP-HRNVITWNSLAS 316
>gi|357141490|ref|XP_003572243.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Brachypodium distachyon]
Length = 884
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/514 (39%), Positives = 297/514 (57%), Gaps = 9/514 (1%)
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P F N+++R + +AL M G + F+ L K C + L Q+
Sbjct: 378 PSTFCCNSILRCLSES----DALSFLRRMRTLGRRGNAFSLAILLKPC---RTLSHARQL 430
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H +V G D + SL+ Y C + A +F +M K +W+ +I +A N
Sbjct: 431 HANVVIEGHLRDSLLATSLMRSYAICGVGDCARKVFDEMVMKDTVAWNVLITCYARNKRT 490
Query: 214 SECLKLFGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L LF EM E +P+E + +L ACT LGALD G+ + + + V
Sbjct: 491 KDTLWLFDEMRRGESEVKPDEVTCILLLQACTSLGALDFGEQIWEYAVEHGYGCELKVRN 550
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
S+I MY +CGC+EK +F K +T+S MI GLA +G G++A+S F EM R G+ P
Sbjct: 551 SVITMYTRCGCVEKAYQVFCHTPQKSVVTWSAMIMGLAANGFGEDAISAFEEMSRSGVVP 610
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + GVLSACSH+GLV+EG FD M+ EY+++P V+HYGC+VDLMGRAG+L EA EL
Sbjct: 611 DGQTFTGVLSACSHSGLVDEGFRFFDMMRYEYKMMPNVRHYGCIVDLMGRAGLLDEAYEL 670
Query: 393 I-QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+ + M + + +WR+LL A ++H ++++GE +L ++ + DYVLL N YA A
Sbjct: 671 VVKEMKVAPDATIWRTLLGACRIHGHVDLGEKVISHLIELKAQQAGDYVLLLNTYAAAGD 730
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA++R M + +PG + VE+ ++++F++ D SHP IY + ++ L+
Sbjct: 731 WEKVAEVRKLMRENEIQTTPGCTTVELNGELHEFIADDASHPRKAEIYGKLDEINRHLRI 790
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P +S L D+D + K L HS+KLAIAFAL+ + Q PIR+A+NLR+C DCH +
Sbjct: 791 AGYVPHVSSDLHDLDSEGKECALTYHSEKLAIAFALLVMPQRRPIRLAKNLRVCVDCHNF 850
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK+ S +Y R +IVRDR RFH F G CSC DYW
Sbjct: 851 TKVFSGVYNRLVIVRDRTRFHHFNGGQCSCNDYW 884
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+LK C+ L +++HA+V+ G + A++L+ + A+ G D A +F ++
Sbjct: 417 LLKPCRTLSHARQLHANVVIEGHLRDSLLATSLMRSYAIC--GVGDCARKVFDEMVMKDT 474
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N LI + + ++ L+L++EM E V+PD T L +AC L AL G QI
Sbjct: 475 VAWNVLITCYARNKRTKDTLWLFDEMRRGESEVKPDEVTCILLLQACTSLGALDFGEQIW 534
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ + G+ C+L V+NS+I MY +C VE A +F QKSV +WSA+I A+NG
Sbjct: 535 EYAVEHGYGCELKVRNSVITMYTRCGCVEKAYQVFCHTPQKSVVTWSAMIMGLAANGFGE 594
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+ + F EM+ P+ VLSAC+H G +D G
Sbjct: 595 DAISAFEEMSRSGVV-PDGQTFTGVLSACSHSGLVDEG 631
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 323/562 (57%), Gaps = 4/562 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L E ++VHAH++K + + A+ L+ G++D A ++ + E + +I
Sbjct: 57 LGEGRQVHAHMVKARYRPPVYLATRLIILYV--RCGALDDARNVLDGMPERNVVSWTAMI 114
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ + EAL L+ M G + + FT + +C Q++++ Q+H V K FE
Sbjct: 115 SGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFE 174
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+FV +SL++MYGK ++ A +F + ++ S +AII+ +A GL E L LF ++
Sbjct: 175 SHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQL 234
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ + ++L++ + L +L+ GK HG ++R ++++ SLIDMY KCG
Sbjct: 235 YSSG-MQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGK 293
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L +F M + ++++ M+ G HG G+E + +F M E ++PD V + VLS
Sbjct: 294 LLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSG 352
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSH GLV+EGL FD + E V + HYGCV+DL+GR+G L +AL+LI+ MP +
Sbjct: 353 CSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPA 412
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W SLL A +VH N+ +GE+ A+ L + + +YV+LSN+YA A W DV ++R M
Sbjct: 413 IWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFRVRKLML 472
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
+ + P S + + + ++ F S +R HP +I I ++ +K G+ PD+S VL
Sbjct: 473 ENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAGFVPDLSCVLH 532
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
DVD+++K L GHS+KLAI F L++ G I++ +NLR+C DCH + K +S +Y REI
Sbjct: 533 DVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAKFVSKVYGREI 592
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
+RD+ RFH KDG C+C DYW
Sbjct: 593 SLRDKNRFHLLKDGACTCGDYW 614
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 150/293 (51%), Gaps = 9/293 (3%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G + + A AC + QAL EG Q+H H+ K + +++ LI +Y +C ++ A
Sbjct: 36 GADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDA 95
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+ M +++V SW+A+I+ ++ +G +E L+LF M C + E L +VL++C
Sbjct: 96 RNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGC-KANEFTLATVLTSCPV 154
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
++ + H +++ ++ V +SL+DMY K G +++ +F M+ ++ ++ + +
Sbjct: 155 HQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAI 214
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKL 362
ISG A G EAL +F ++ G++ + V + +L++ S +N G R +L
Sbjct: 215 ISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKEL 274
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ IV ++D+ + G L + + +MP Q++ + W ++L H
Sbjct: 275 PFFIVLQ----NSLIDMYSKCGKLLYSRRVFDNMP-QRSAISWNAMLMGYGRH 322
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/433 (45%), Positives = 278/433 (64%), Gaps = 5/433 (1%)
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
N +GK + A +F +M + V SW++++A +A G +E L LF +M +P E
Sbjct: 159 NTFGKRDD---AFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV-KPTE 214
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+ +VS+LSAC HLGALD G H + N +N IV T+L+DMY KCG + +F
Sbjct: 215 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 274
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M K L ++ +I+G+A+HG KEA +F EM G+EP+D+ +V +LSACSHAG+V+EG
Sbjct: 275 MESKDVLAWNTIIAGMAIHGHVKEAQRLFKEMKEAGVEPNDITFVAMLSACSHAGMVDEG 334
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
D M Y I P V+HYGCV+DL+ RAG+L EA+ELI +MP++ N +LL +
Sbjct: 335 QKLLDCMSSSYGIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCALGALLGGCR 394
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
+H N E+GE+ K L + H Y+LLSN+YA A++W D K+R M G+++ PG
Sbjct: 395 IHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGV 454
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQVLRDVDEDEKRE 532
S++E+ V++FV+ D SHP + IYE ++++ +LK G+S D VL D++E++K
Sbjct: 455 SVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGHSADTGDVLLDMEEEDKEH 514
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L HS+KLAIA+ L+HL IRI +NLR+C DCH TKLIS +Y REIIVRDR RFH
Sbjct: 515 ALPVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVTKLISKVYGREIIVRDRNRFH 574
Query: 593 RFKDGTCSCRDYW 605
F+DG CSC D+W
Sbjct: 575 HFEDGECSCLDFW 587
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+G D A +F ++ +N+++ + + + EAL L+++M GV+P T +L
Sbjct: 161 FGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSL 220
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA L AL +G+ +H ++ E + V +L++MY KC K+ A+ +F M+ K V
Sbjct: 221 LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 280
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK---- 253
+W+ IIA A +G E +LF EM E P + V++LSAC+H G +D G+
Sbjct: 281 LAWNTIIAGMAIHGHVKEAQRLFKEM-KEAGVEPNDITFVAMLSACSHAGMVDEGQKLLD 339
Query: 254 CTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMM---ADKCQLTYSVMISG 308
C S + VE +ID+ + G LE+ + L M + C L ++ G
Sbjct: 340 CMSSSY-----GIEPKVEHYGCVIDLLARAGLLEEAMELIGTMPMEPNPCAL--GALLGG 392
Query: 309 LAMHGQ 314
+HG
Sbjct: 393 CRIHGN 398
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/528 (37%), Positives = 313/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + + +N +I +V+ F EA+ L+ + + G++ ++ TF +
Sbjct: 256 GLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLML 315
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
L +L +G IH V + G++ D+ V +L+++YG+CE A IF M K V
Sbjct: 316 NVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVI 375
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ + A+A NG E L+LF EM E RP + LV+VL C HL AL G+ H
Sbjct: 376 TWTVMCVAYAQNGFRKEALQLFQEMQLEG-RRPTSATLVAVLDTCAHLAALQKGRQIHSH 434
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+I N + ++VET+LI+MY KCG + + +F MA + L ++ M+ A HG E
Sbjct: 435 IIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDET 494
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F++M +G + D V +V VLSA SH+G V +G F M ++ I PT + YGCVVD
Sbjct: 495 LQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVD 554
Query: 379 LMGRAGMLGEALELIQSMP-IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
L+GRAG + EA++++ + + ++W +LL A + H+ + + AA+ + + + H
Sbjct: 555 LLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSG 614
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YV+LSN+YA A W V ++R M S+G+ + PG S +E+ +V++F+ DRSHP
Sbjct: 615 AYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHP 674
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + + +++ GY PD +L DV+++ K + L HS++LAIAF L+ G+P+R
Sbjct: 675 IYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLR 734
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C+DCHT TK IS + REI+VRD RFH FKDG CSC+DYW
Sbjct: 735 VIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCKDYW 782
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 201/412 (48%), Gaps = 9/412 (2%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L+ C KN++ ++VH HV GF N +L+ A GS+ A +F +
Sbjct: 9 VALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYA--QCGSVPEAQQVFEIL 66
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ F + +I + ++ +++ AL ++ +M E V P T+ A+ ACA ++LK+GM
Sbjct: 67 ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGM 126
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IHG + + GFE D+FV +LINMY KC V A FK+++ + V SW+A+IAA +
Sbjct: 127 EIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHD 186
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
++ L+ M + P + L +V +A L GK + + + +V V
Sbjct: 187 QFALARWLYRRMQLDGV-VPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVM 245
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
S ++M+ G L LF M D+ +T++++I+ + EA+ +F + ++G++
Sbjct: 246 NSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIK 305
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
+D+ +V +L+ + + +G + + +K E V ++ L GR G+A +
Sbjct: 306 ANDITFVLMLNVYTSLTSLAKGKVIHELVK-EAGYDRDVVVATALMSLYGRCEAPGQAWK 364
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
+ M DV+ +++ + + + Q+ P+ L++
Sbjct: 365 IFVDMG--SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVA 414
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 143/284 (50%), Gaps = 5/284 (1%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+PD F AL + C+ + + G ++H HV GFE + V LI MY +C V A
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F+ +++K V +W+ +I + G + L +F +M E P + V++L+AC
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVM-PTKVTYVAILNACASTE 120
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+L G HG +++ +V V T+LI+MY KCG + F+ + + ++++ MI+
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
H Q A ++ M +G+ P+ + V +A ++EG + + R++
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYS--LVSSRVM 238
Query: 368 PT-VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+ V+ +++ G AG+LG+A L + M + ++ V W +++
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVIT 281
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%)
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
++P+ + V++L C+ +D G+ H + N +V LI MY +CG + +
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F ++ K ++ MI G AL +F +M E + P V YV +L+AC+
Sbjct: 61 QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120
Query: 349 LVNEGL 354
+ +G+
Sbjct: 121 SLKDGM 126
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIF 88
+ +L TC +L +K +H+H+++ GF + N+ C G M A S+F
Sbjct: 413 VAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKC-----GKMAEARSVF 467
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
++ + +N+++ + + ++E L L+N+M G + D +F ++ A + ++
Sbjct: 468 EKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVT 527
Query: 149 EGMQ 152
+G Q
Sbjct: 528 DGYQ 531
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 317/563 (56%), Gaps = 11/563 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---DYACSIFRQIDEPGAFDFNTLIR 104
K++HA +K G + F V A + D A +F +I E +N I
Sbjct: 128 KQIHALAVKCGRILDVF-----VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + EA+ + E P++ TF A AC+ L GMQ+HG V + GF+
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+ V N LI+ YGKC+++ + IF +M K+ SW +++AA+ N + L+ +
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-S 301
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + ++ SVLSAC + L+LG+ H ++ + V ++L+DMY KCGC+
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL--EPDDVVYVGVLS 342
E F M +K +T + +I G A GQ AL++F EM G P+ + +V +LS
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACS AG V G+ FD M+ Y I P +HY C+VD++GRAGM+ A E I+ MPIQ
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
VW +L +A ++H ++G +AA+NLF+++ ++VLLSN +A A RW + +R E+
Sbjct: 482 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G+ + G+S + V +V+ F ++DRSH I + ++ +++ GY PD+ L
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 601
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
D++E+EK + HS+KLA+AF L+ L PIRI +NLR+C DCH++ K +S +RE
Sbjct: 602 YDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKRE 661
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFHRFKDG CSC+DYW
Sbjct: 662 IIVRDNNRFHRFKDGICSCKDYW 684
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 171/367 (46%), Gaps = 14/367 (3%)
Query: 50 VHAHVLK-WGFFWNPFCASNLVATCALSHWGSMDYACS---IFRQIDEPGAFDFNTLIRG 105
VHA ++K PF A+ L+ + + +D+ S + R + +LI G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLI-----NMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ F AL + EM GV P++FTFP FKA A L+ G QIH K G D
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+FV S +MY K + A +F ++ ++++ +W+A I+ ++G E ++ F E
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
P + L+AC+ L+LG HG ++R+ +V V LID Y KC +
Sbjct: 203 ID-GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M K +++ +++ + + ++A ++ ++ +E D + VLSAC+
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 346 H-AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
AGL E ++ + T+ +VD+ G+ G + ++ + MP ++N V
Sbjct: 322 GMAGL--ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVT 378
Query: 405 WRSLLSA 411
SL+
Sbjct: 379 RNSLIGG 385
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/600 (35%), Positives = 328/600 (54%), Gaps = 34/600 (5%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I + C+ + +++HA G + F +NL+ A + G + A +F I +
Sbjct: 51 IFRACRAIPLLRQLHAFAATSGAAADRFTTNNLLL--AYADLGDLPTARHLFEGISKRNV 108
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFER------------------------------- 125
+N LI G +K + A L+++M R
Sbjct: 109 MSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRRE 168
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G+ PD F ++F+ CA L + G Q+H +V + G + D+ V NSL +MY +C +
Sbjct: 169 GMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEG 228
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
A+ + + ++ S++ IA NG L+ F M + P+ VS +S C+
Sbjct: 229 EAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEV-APDVVTFVSAISCCSD 287
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L AL G+ H +I+ V V TSL+ MY +CGCL ++ S M
Sbjct: 288 LAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAM 347
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
IS HGQG +A+ +F +M+ G EP++V ++ +L ACSH+GL +EGL F+ M Y
Sbjct: 348 ISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYG 407
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAA 425
P+V+HY C+VDL+GR+G L EA LI SMP++ + V+W++LLSA K N ++ E A
Sbjct: 408 FQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIA 467
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
+ + + + + YVLLSN+ A ++RW DV ++R M K + + PG S VE +V++F
Sbjct: 468 ERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQF 527
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
+ D+SHP I E + +M +++ GY+PD++ V D++++EK L HS+KLAIAF
Sbjct: 528 CTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAF 587
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
A ++L +G PIR+ +NLR+C+DCH KLIS + REI+VRD RFH F+DG CSC DYW
Sbjct: 588 AFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 124/301 (41%), Gaps = 56/301 (18%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D F +F+AC + L+ Q+H G D F N+L+ Y + A +F
Sbjct: 44 DASLFSHIFRACRAIPLLR---QLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLF 100
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWR----------------- 230
+ + +++V SW+ +I NG +LF +M N W
Sbjct: 101 EGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQ 160
Query: 231 -----------PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
P+E L SV C L + G+ H ++R+ ++ V SL MY+
Sbjct: 161 FFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYM 220
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
+CGCL +G + R + ++++ I+G +G + AL FS M + PD V +V
Sbjct: 221 RCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVS 280
Query: 340 VLSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+S CS HA ++ G+ ++VP + +V + R G LG+
Sbjct: 281 AISCCSDLAALAQGQQVHAQVIKAGV---------DKVVPVITS---LVHMYSRCGCLGD 328
Query: 389 A 389
+
Sbjct: 329 S 329
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/531 (38%), Positives = 306/531 (57%), Gaps = 52/531 (9%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+ PD + + ACA + A G +HG + G DLFV N+L++MY KC V+ AS
Sbjct: 9 MRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEAS 68
Query: 187 AIFKQMDQK-----------------------------------SVASWSAIIAAHASNG 211
+F ++ +K +V SWSA+IAA A G
Sbjct: 69 KVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 212 LWSECLKLFGEMNNEKC--------WRPEESILVS--------VLSACTHLGALDLGKCT 255
L E L +F EM + + W ++ LV L AC L AL LG+
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 256 HGSLIRN-ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H ++RN + + V LIDMY K G ++ +F + K ++++ +++G MHG+
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGR 248
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
GKEAL +F EM R GL+PD V + VL ACSH+G++++G+ F+ M E+ ++P +HY
Sbjct: 249 GKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYA 308
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
C+VDL+GRAG L EA+ELI+ M ++ + +VW +LLS ++H N+E+GE AAK L ++NS
Sbjct: 309 CMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSE 368
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
+ Y LLSN+YA A+RW DVA++R+ M + G+ + PG S V+ + F D++HP
Sbjct: 369 NDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQ 428
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
IYE++ + ++K GY P+ S L DVD++EK + L HS+KLA+A+ ++ + G+
Sbjct: 429 SKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKVDLLFEHSEKLALAYGILISAPGA 488
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIRI +NLR+C DCH IS+I + EII+RD RFH FK G+CSC YW
Sbjct: 489 PIRITKNLRVCGDCHNAITYISMIIDHEIILRDSSRFHHFKKGSCSCSGYW 539
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 29 LKEQECLTI---LKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNL-VATCALSHW--- 78
L + C TI L C L + ++HA++L+ N F ++ L VA C + +
Sbjct: 161 LVKPNCFTISCALIACARLAALRLGRQIHAYILR-----NHFDSAFLYVANCLIDMYAKS 215
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F + + + +L+ G+ +EAL +++EM G++PD T +
Sbjct: 216 GDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVL 275
Query: 139 KACAKLQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFK--QMDQK 195
AC+ + +G++ + K G ++++ G+ ++ A + + QM+
Sbjct: 276 YACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPS 335
Query: 196 SVASWSAIIAA---HASNGLWSECLKLFGEMNNEK 227
S+ W A+++ HA+ L K E+N+E
Sbjct: 336 SIV-WVALLSGCRIHANVELGEHAAKQLLELNSEN 369
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 317/563 (56%), Gaps = 11/563 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---DYACSIFRQIDEPGAFDFNTLIR 104
K++HA +K G + F V A + D A +F +I E +N I
Sbjct: 78 KQIHALAVKCGRILDVF-----VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 132
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + EA+ + E P++ TF A AC+ L GMQ+HG V + GF+
Sbjct: 133 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 192
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+ V N LI+ YGKC+++ + IF +M K+ SW +++AA+ N + L+ +
Sbjct: 193 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-S 251
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + ++ SVLSAC + L+LG+ H ++ + V ++L+DMY KCGC+
Sbjct: 252 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 311
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL--EPDDVVYVGVLS 342
E F M +K +T + +I G A GQ AL++F EM G P+ + +V +LS
Sbjct: 312 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 371
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACS AG V G+ FD M+ Y I P +HY C+VD++GRAGM+ A E I+ MPIQ
Sbjct: 372 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 431
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
VW +L +A ++H ++G +AA+NLF+++ ++VLLSN +A A RW + +R E+
Sbjct: 432 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 491
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G+ + G+S + V +V+ F ++DRSH I + ++ +++ GY PD+ L
Sbjct: 492 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 551
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
D++E+EK + HS+KLA+AF L+ L PIRI +NLR+C DCH++ K +S +RE
Sbjct: 552 YDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKRE 611
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFHRFKDG CSC+DYW
Sbjct: 612 IIVRDNNRFHRFKDGICSCKDYW 634
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 5/326 (1%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+ R + +LI G + F AL + EM GV P++FTFP FKA A L+
Sbjct: 14 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 73
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
G QIH K G D+FV S +MY K + A +F ++ ++++ +W+A I+
Sbjct: 74 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 133
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
++G E ++ F E P + L+AC+ L+LG HG ++R+
Sbjct: 134 SVTDGRPREAIEAFIEFRRID-GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 192
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V V LID Y KC + +F M K +++ +++ + + ++A ++
Sbjct: 193 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 252
Query: 327 REGLEPDDVVYVGVLSACSH-AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
++ +E D + VLSAC+ AGL E ++ + T+ +VD+ G+ G
Sbjct: 253 KDIVETSDFMISSVLSACAGMAGL--ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 310
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA 411
+ ++ + MP ++N V SL+
Sbjct: 311 IEDSEQAFDEMP-EKNLVTRNSLIGG 335
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 127/309 (41%), Gaps = 26/309 (8%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY K + E A + + ++V SW+++I+ A NG +S L F EM E P +
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV-PNDF 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
A L GK H ++ L+V V S DMY K + LF +
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
++ T++ IS G+ +EA+ F E R P+ + + L+ACS +N G+
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
+ L V ++D G+ + + E+I + +N V W SL++A
Sbjct: 180 Q-LHGLVLRSGFDTDVSVCNGLIDFYGKCKQI-RSSEIIFTEMGTKNAVSWCSLVAAYVQ 237
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
+H E + +Y R+++ D+ + M S L+ G +
Sbjct: 238 NHEDEKASV---------------------LYLRSRK--DIVETSDFMISSVLSACAGMA 274
Query: 475 LVEVARKVY 483
+E+ R ++
Sbjct: 275 GLELGRSIH 283
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/579 (37%), Positives = 331/579 (57%), Gaps = 15/579 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFR 89
TIL++C + + +++HA +L G + A+ LV A+C G + A +F
Sbjct: 73 TILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASC-----GHVSLARRVFD 127
Query: 90 QIDEPG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQAL 147
++ G F +N LIR + ++ E A+ LY M G ++PDNFT+P + KACA L L
Sbjct: 128 EMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDL 187
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G ++H V + + D+FV LI+MY KC ++ A A+F + A W+++IAA
Sbjct: 188 SAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAAC 247
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
NG +E L L M E P + LVS +SA AL G+ HG R
Sbjct: 248 GQNGRPAEALTLCRNMAAEGI-APTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
++TSL+DMY K G + LF + + ++++ MI G MHG A +FS M
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366
Query: 328 EG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
E + PD + +VGVLSAC+H G+V E FD M Y I PTVQHY C+VD++G +G
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
EA ++I+ M ++ + +W +LL+ K+H N+E+ E+A + L ++ +YVLLSN+Y
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A + +W + A++R M ++GL + S +E+ K + F+ D SHP D+IYE + ++E
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLE 546
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+ GY PD + V +V++DEKR + GHS++LAIAF LI + + + +NLR+C
Sbjct: 547 GLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCE 606
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH KLIS I +REII+RD R+H F +G CSC+D+W
Sbjct: 607 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 1/201 (0%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ + ++C +A++ G Q+H + G D + L+++Y C V A +F +M
Sbjct: 70 NYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEM 129
Query: 193 -DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+Q +V W+ +I A+A +G ++L+ M +P+ VL AC L L
Sbjct: 130 PNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSA 189
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G+ H ++R A +V V T LIDMY KCGC+++ +F + ++ MI+
Sbjct: 190 GREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQ 249
Query: 312 HGQGKEALSIFSEMLREGLEP 332
+G+ EAL++ M EG+ P
Sbjct: 250 NGRPAEALTLCRNMAAEGIAP 270
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/528 (38%), Positives = 311/528 (58%), Gaps = 10/528 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A IF ++ + + ++I G+ + + A ++FE + + T+ A+
Sbjct: 185 GRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVA----RKLFEVMPDKNEVTWTAML 240
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
K + + E ++ FK + N +I +G +V A +F QM +K
Sbjct: 241 KGYTRSGRINEAAEL----FKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDG 296
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+WSA+I + G E L LF M E RP ++S+LS C L +LD G+ H
Sbjct: 297 TWSALIKIYERKGFELEALALFSLMQREGV-RPNFPSIISILSVCGSLASLDHGRQVHSQ 355
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L+R+ L++ V + LI MY+KCG L G +F + K + ++ +I+G A HG G++A
Sbjct: 356 LVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKA 415
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F EM G PD++ ++GVLSAC + G V EGL F+ MK +Y++ +HY C+VD
Sbjct: 416 LEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVD 475
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA+ LI++MP++ + +VW +LLSA + H NL++ EIAAK L Q+
Sbjct: 476 LLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGP 535
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV-SQDRSHPAWDN 497
Y+LLSN+YA RW DVA++R M ++ +++SPG S +EV KV+ F SHP +
Sbjct: 536 YILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEM 595
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
I + + ++ L+ GY PD S V+ DVDE++K L+ HS+K+A+A+ L+ + G PIR
Sbjct: 596 IMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIR 655
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C DCH+ KLI+ + REII+RD RFH FKDG CSCRD+W
Sbjct: 656 VMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 25/279 (8%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ E + +++RG+V+E +EA L+ M E+ V L
Sbjct: 92 GMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLI 151
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA--IFKQMDQKS 196
+ +A + +F + D+ ++I G C + + A IF +M Q++
Sbjct: 152 EDGRVDEARR--------LFDMIPVKDVVASTNMIG--GLCSEGRLSEAREIFDEMPQRN 201
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKC 254
V +W+++I+ +A N KLF M NE W ++L T G ++
Sbjct: 202 VVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTW-------TAMLKGYTRSGRIN---- 250
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
L + + V +I + G + K +F M +K T+S +I G
Sbjct: 251 EAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGF 310
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
EAL++FS M REG+ P+ + +LS C ++ G
Sbjct: 311 ELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHG 349
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 63/313 (20%)
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
++ F + I+ + + +++ A IF + K+V SW+AI+A + N +E
Sbjct: 8 YRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQ 67
Query: 218 KLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
KLF +M PE + + ++S G + + + + NV+ TS++
Sbjct: 68 KLFDKM-------PERNTISWNGLVSGYVKNGMISEAR----KVFDKMPERNVVSWTSMV 116
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
YV+ G +++ LF M +K ++++VM+ GL G+ EA +F D+
Sbjct: 117 RGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF-----------DM 165
Query: 336 VYVGVLSACSH--AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ V + A ++ GL +E G L EA E+
Sbjct: 166 IPVKDVVASTNMIGGLCSE-------------------------------GRLSEAREIF 194
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI-NSHHPSDYVLLSNMYARAQRW 452
MP Q+N V W S++S +++ +++ A+ LF++ + + + Y R+ R
Sbjct: 195 DEMP-QRNVVAWTSMISGYAMNNKVDV----ARKLFEVMPDKNEVTWTAMLKGYTRSGRI 249
Query: 453 YDVAKIRTEMASK 465
+ A++ M K
Sbjct: 250 NEAAELFKAMPVK 262
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 340/580 (58%), Gaps = 13/580 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCA-SNLVATCALSHWGSMDYACSIFRQI 91
++ C LE K++H+ ++ G + C+ ++ A C+ GS+D +F ++
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD--GSVDDCRKVFDRM 331
Query: 92 DEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
++ + LI G++K EA+ L++EM +G VEP++FTF + FKAC L +
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+ G FK G + V NS+I+M+ K +++E A F+ + +K++ S++ +
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N + + KL E+ E+ S+LS ++G++ G+ H +++ + N
Sbjct: 452 NLNFEQAFKLLSEIT-ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LI MY KCG ++ +F M ++ ++++ MI+G A HG L F++M+ EG
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++P++V YV +LSACSH GLV+EG F+ M +++I P ++HY C+VDL+ RAG+L +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E I +MP Q + +VWR+ L A +VH N E+G++AA+ + +++ + P+ Y+ LSN+YA A
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W + ++R +M + L + G S +EV K++KF D +HP IY+ + ++ ++
Sbjct: 691 GKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Query: 510 KFEGYSPDISQVLRDVDEDEKRER----LKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
K GY PD VL ++E+ L HS+K+A+AF LI S+ P+R+ +NLR+C
Sbjct: 751 KRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVC 810
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K IS + REI++RD RFH FKDG CSC DYW
Sbjct: 811 GDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 12/329 (3%)
Query: 34 CLT-ILKTCKNLEEFKKVH----AHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
C T +++ C N +F V ++K G F + C + + S + A +F
Sbjct: 168 CYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
++ E + +I ++ EA+ + +M G E D FT ++F ACA+L+ L
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS 286
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSVASWSAIIA 205
G Q+H + G D V+ SL++MY KC V+ +F +M+ SV SW+A+I
Sbjct: 287 LGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 206 AHASN-GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ N L +E + LF EM + P S AC +L +GK G +
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
A N V S+I M+VK +E F +++K ++Y+ + G + ++A + SE
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ L + +LS ++ G + +G
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 18/324 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK+C +F K VHA ++++ + ++L++ S G A +F +
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISL--YSKSGDSAKAEDVFETMR 124
Query: 93 EPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
G D ++ ++ + +A+ ++ E E G+ P+++ + A+ +AC+ +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 150 GMQIHGHVFKVG-FECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVASWSAIIAAH 207
G G + K G FE D+ V SLI+M+ K E E A +F +M + +V +W+ +I
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
G E ++ F +M + ++ L SV SAC L L LGK H IR S L
Sbjct: 245 MQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIR--SGLV 301
Query: 268 VIVETSLIDMYVKC---GCLEKGLCLFRMMADKCQLTYSVMISGLAMH-GQGKEALSIFS 323
VE SL+DMY KC G ++ +F M D ++++ +I+G + EA+++FS
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 324 EMLREG-LEPDDVVYVGVLSACSH 346
EM+ +G +EP+ + AC +
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGN 385
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 7/230 (3%)
Query: 122 MFERGVEP-DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M G+ P D+ TF +L K+C + + + G +H + + E D + NSLI++Y K
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 181 KVEFASAIFKQM---DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
A +F+ M ++ V SWSA++A + +NG + +K+F E E P +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYT 170
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKC-GCLEKGLCLFRMMA 295
+V+ AC++ + +G+ T G L++ +V V SLIDM+VK E +F M+
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ +T+++MI+ G +EA+ F +M+ G E D V SAC+
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 230 RPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
RP +S+ S+L +C LGK H LI + ++ SLI +Y K G K
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 289 CLFRMM---ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M + +++S M++ +G+ +A+ +F E L GL P+D Y V+ ACS
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 346 HAGLVNEG 353
++ V G
Sbjct: 178 NSDFVGVG 185
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/574 (36%), Positives = 319/574 (55%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ ++ C +L E K++H LK+G F SNL S G+M AC +F ++
Sbjct: 111 SAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDM--YSKCGAMFDACKVFEEMP 168
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G+ K EFEEAL + +M + V D + AC L+A K G
Sbjct: 169 CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRS 228
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK-QMDQKSVASWSAIIAAHASNG 211
+H V K+GFE D+FV N+L +MY K +E AS +F + ++V S++ +I +
Sbjct: 229 VHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETE 288
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ L +F E+ + P E S++ AC + AL+ G H +++ + V
Sbjct: 289 QIEKGLSVFVELRRQGI-EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ L+DMY KCG LE + F + D ++ ++ ++S HG GK+A+ F M+ G++
Sbjct: 348 SILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVK 407
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ + ++ +L+ CSHAGLV EGL F M Y +VP +HY CV+DL+GRAG L EA E
Sbjct: 408 PNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 467
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I MP + N W S L A ++H + E+G++AA+ L ++ + VLLSN+YA ++
Sbjct: 468 FINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQ 527
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R M + + PG+S V+V K + F ++D SH IYE + + Q+K
Sbjct: 528 WEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKA 587
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P V D+D+ K + L HS+++A+AFALI + G PI + +NLR+C DCH+
Sbjct: 588 AGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSA 647
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + R+IIVRD RFH F DG+CSC DYW
Sbjct: 648 IKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 195/382 (51%), Gaps = 9/382 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T KT K L K++HA ++ G+ F ++LV S G +D+A +F + +
Sbjct: 14 TYAKT-KRLRRGKQLHALLICAGYTPCTFLTNHLVNM--YSKCGELDHALKLFDTMPQRN 70
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +I G + +F EA+ + M G P F F + +ACA L +++ G Q+H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
K G +LFV ++L +MY KC + A +F++M K SW+A+I ++ G + E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L F +M +E+ ++ +L S L AC L A G+ H S+++ ++ V +L
Sbjct: 191 ALLAFKKMIDEEV-TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 249
Query: 276 DMYVKCGCLEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
DMY K G +E +F + ++ + ++Y+ +I G Q ++ LS+F E+ R+G+EP++
Sbjct: 250 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 309
Query: 335 VVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ ++ AC++ + +G L MK+ + P V +VD+ G+ G+L A++
Sbjct: 310 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEHAIQAF 367
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
+ ++ W SL+S H
Sbjct: 368 DEIG-DPTEIAWNSLVSVFGQH 388
>gi|449450898|ref|XP_004143199.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/572 (37%), Positives = 327/572 (57%), Gaps = 6/572 (1%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C +L H+ LK GF N ++L+ C + + S+ A +F ++ P
Sbjct: 34 LRNCNDLISSISTHSIALKLGFLNNTVNVNHLI-NCYV-RFRSIATAHQLFDEMPNPNVV 91
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +L+ G+V + ALFL+ EM V P++FTF KAC+ L L+ G H HV
Sbjct: 92 SWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHV 151
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
G+ ++ V +SLI+MYGKC V A +F M K++ SW+++IAA+A N E L
Sbjct: 152 EIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEAL 211
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
K+F E + P +L SV+SAC LG L GK HG+ I + +V + L+DM
Sbjct: 212 KVFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDM 271
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L+ +F +++ + Y+ MI A +G G+++L +F EM+R+GL+P+ +
Sbjct: 272 YAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITL 331
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
VGVL ACSH+GL NEGL M +Y I+P +HY CVVD++ R G L +A +L +SM
Sbjct: 332 VGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMD 391
Query: 398 IQQND--VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
+ +D ++W +LLSAS+ H ++I A + L N YV LSN+YA A
Sbjct: 392 VAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKA 451
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD-RSHPAWDNIYEMIHQMEWQLKFEGY 514
K+R EM G+++ PG S +E+ Y F + + S P D + ++ +++ ++K GY
Sbjct: 452 HKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSCPRGDEVLCLLRELDQKMKDRGY 511
Query: 515 -SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
V D++E+ + E++ HS++LA+ F LI + +G IRI +NLRMC+DCH K
Sbjct: 512 VRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFK 571
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I ERE +VRD RFH FK+G C+C +W
Sbjct: 572 LISEIMEREFVVRDINRFHHFKNGCCTCNGFW 603
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 305/562 (54%), Gaps = 36/562 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A + E +N +I G+V F EAL ++ +M+ G++ D FT+ ++
Sbjct: 239 GELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVL 298
Query: 139 KACAKLQALKEGMQIHGHVFKV----GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
ACA G Q+H ++ + + L V N+L +Y KC KV+ A +F QM
Sbjct: 299 SACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPV 358
Query: 195 KSVASWSAIIAAH-------------------------------ASNGLWSECLKLFGEM 223
K + SW+AI++ + A NG E LKLF M
Sbjct: 359 KDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRM 418
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+E + P + + AC L AL G+ H L+R ++ +LI MY KCG
Sbjct: 419 KSEG-FEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGV 477
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E CLF M ++++ MI+ L HG G +AL +F ML+E + PD + ++ VLS
Sbjct: 478 VEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLST 537
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSHAGLV EG F M Y I P HY ++DL+ RAG EA ++I++MP++
Sbjct: 538 CSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPP 597
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W +LL+ ++H N+++G AA+ LF++ H YVLLSNMYA RW DVAK+R M
Sbjct: 598 IWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMR 657
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
KG+ + PG S +EV KV+ F+ D HP +Y + ++ +++ GY PD VL
Sbjct: 658 DKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLH 717
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++ ++K L HS+KLA+ F L+ L G+ +R+ +NLR+C DCH K +S + EREI
Sbjct: 718 DMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREI 777
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
+VRD KRFH FK+G CSC +YW
Sbjct: 778 VVRDGKRFHHFKNGECSCGNYW 799
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 168/383 (43%), Gaps = 53/383 (13%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECL-TILKTCKNLEEFKKVHAHV-LKWGFFWNPF 64
+H +L T+P P L+ L L T+ C ++E ++V + +K WN
Sbjct: 313 VHAYILRTEPR-----PSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAI 367
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
+ + A G +D A S F ++ E + +I G + EE+L L+N M
Sbjct: 368 LSGYVNA-------GRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKS 420
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
G EP ++ F ACA L AL G Q+H + ++GF+ L N+LI MY KC VE
Sbjct: 421 EGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEA 480
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F M SW+A+IAA +G ++ L+LF M E P+ ++VLS C+
Sbjct: 481 AHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDIL-PDRITFLTVLSTCS 539
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
H G ++ G +++S L G+C + Y+
Sbjct: 540 HAGLVEEGH----RYFKSMSGL-------------------YGIC-------PGEDHYAR 569
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
MI L G+ EA + M +EP ++ +L+ C G ++ G+ +R+ +
Sbjct: 570 MIDLLCRAGKFSEAKDMIETM---PVEPGPPIWEALLAGCRIHGNMDLGIQAAERL---F 623
Query: 365 RIVPTVQHYGCVVDLMGRAGMLG 387
++P QH G V L +G
Sbjct: 624 ELMP--QHDGTYVLLSNMYATVG 644
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 170/395 (43%), Gaps = 83/395 (21%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEGMQIHGHV 157
+N +I G+ + A+ L+ ++ G PDNFTF ++ A A + + K+ QIH V
Sbjct: 117 YNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAV 176
Query: 158 FKVGFECDLFVQNSLINMYGKCE------------------------------------- 180
K G V N+L++++ KC
Sbjct: 177 VKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYV 236
Query: 181 ---KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESIL 236
+++ A M +K V +W+A+I+ + +G + E L++F +M W +E
Sbjct: 237 RNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW--DEFTY 294
Query: 237 VSVLSACTHLGALDLGKCTHGSLIR---------NISALNVIVE---------------- 271
SVLSAC + G GK H ++R ++S N +
Sbjct: 295 TSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFN 354
Query: 272 ----------TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+++ YV G +++ F M ++ LT++VMISGLA +G G+E+L +
Sbjct: 355 QMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKL 414
Query: 322 FSEMLREGLEPDDVVYVGVLSACSH-AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
F+ M EG EP D + G + AC+ A L++ L ++L + ++ ++ +
Sbjct: 415 FNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFD--SSLSAGNALITMY 472
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ G++ A L +MP + V W ++++A H
Sbjct: 473 AKCGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQH 506
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 133/340 (39%), Gaps = 87/340 (25%)
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H H+ GF+ ++ N LI++Y K + A +F ++ Q + + + +IAAH+S G
Sbjct: 37 VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96
Query: 213 WSECLKLFGEM-------------------NNE-------------KCWRPEESILVSVL 240
+ ++F NN+ +RP+ SVL
Sbjct: 97 SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156
Query: 241 SACTHLGALDLGKC--THGSLIRNISALNVIVETSLIDMYVKC----------------- 281
A L D +C H +++++ S V +L+ ++VKC
Sbjct: 157 GALA-LIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARK 215
Query: 282 -----------------------GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
G L+ M +K + ++ MISG HG EA
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEA 275
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG-------LLCFDRMKLEYRIVPTVQ 371
L +F +M G++ D+ Y VLSAC++AG G L R L++ +
Sbjct: 276 LEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVN-- 333
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ L + G + EA ++ MP+ ++ V W ++LS
Sbjct: 334 --NALATLYWKCGKVDEARQVFNQMPV-KDLVSWNAILSG 370
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/530 (36%), Positives = 310/530 (58%), Gaps = 5/530 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S W S + IFR +++ + +I + + F++ L+ EM G+ PD F
Sbjct: 134 SDWRSTN---KIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAIT 190
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ A A ++LK G +HG+ + G E L V N+L+ MY KC +E A IF + +K
Sbjct: 191 SALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKK 250
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
SW+ +I ++ + L +E LF EM + RP + +L A L +L+ G+
Sbjct: 251 DTISWNTLIGGYSRSNLANEAFTLFNEMLLQ--LRPNAVTMACILPAAASLSSLERGREM 308
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H +R + V +L+DMYVKCG L LF M+ +K +++++MI+G MHG+G
Sbjct: 309 HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRG 368
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
++A+++F +M G++PD + +L ACSH+GL +EG F+ M+ E+RI P ++HY C
Sbjct: 369 RDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYAC 428
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+ G L EA E I++MPI+ + +W SLL ++H N+++ E A+ +F++ +
Sbjct: 429 MVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPEN 488
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVLL+N+YA A+RW V K++ ++ +GL ++ G S +EV K + F +++R+HP
Sbjct: 489 TGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQG 548
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
I E + + +++ EG+ P L D+ E L GHS KLA+AF +++LSQG P
Sbjct: 549 MRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQGRP 608
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +N R+C+ CH K IS + REII+RD RFH F++G CSCR YW
Sbjct: 609 IRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 14/370 (3%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH +++K+GF + L++ A S+ ++ A +F ++ + +N++I G
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSN--RIEDALMVFDEMPQRDIISWNSIIGGCASN 63
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+++A+ L+ M+ G E D+ T ++ AC + G +HG+ + G + +
Sbjct: 64 GLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLG 123
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N+L++MY C + IF+ M+QK+V SW+A+I ++ G + + LF EM E
Sbjct: 124 NALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGI- 182
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
RP+ + S L A +L GK HG IRN + V +L++MYVKCG +E+
Sbjct: 183 RPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARF 242
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F + K ++++ +I G + EA ++F+EML + L P+ V +L A +
Sbjct: 243 IFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSS 301
Query: 350 VNEG----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
+ G R LE V +VD+ + G L A L M +N + W
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANA-----LVDMYVKCGALLLARRLFD-MLTNKNLISW 355
Query: 406 RSLLSASKVH 415
+++ +H
Sbjct: 356 TIMIAGYGMH 365
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
+G+ +HG++ K GF V N+LI+ Y K ++E A +F +M Q+ + SW++II A
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
SNGL+ + ++LF M E + + L+SV+ AC +G HG +R
Sbjct: 62 SNGLYDKAVELFVRMWLEG-QELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ +L+DMY C +FR M K ++++ MI+ G + +F EM E
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180
Query: 329 GLEPDDVVYVGVLSA 343
G+ PD L A
Sbjct: 181 GIRPDVFAITSALDA 195
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 36/216 (16%)
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G HG L++ V +LI Y K +E L +F M + ++++ +I G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
+G +A+ +F M EG E D + V+ AC ++ Y + V
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPAC---------------VQSHYSFIGGVV 107
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
H V R G++ E + + N WR S +K+ N+E KN+
Sbjct: 108 HGYSV-----RTGLISETSLGNALLDMYSNCSDWR---STNKIFRNME-----QKNVVS- 153
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
+ + Y RA + VA + EM +G+
Sbjct: 154 -------WTAMITSYTRAGHFDKVAGLFQEMGLEGI 182
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 309/529 (58%), Gaps = 5/529 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +F ++ +N ++ G EE+L + M G++PD + +LF
Sbjct: 14 GDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLF 73
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ CA L+ + G Q+H +V + G + D+ V +SL +MY +C + A + + ++
Sbjct: 74 RCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIV 133
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
S + I+ NG L+ F M VS +++C+ L AL G+ H
Sbjct: 134 SCNTTISGRTQNGDAEGALEFFCLMRGAGV-EANAVTFVSAVTSCSDLAALAQGQQIHAL 192
Query: 259 LIRNISALNVIVETSLIDMYVKCGCL--EKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
I+ V V TSL+ MY +CGCL + +CL D + S MIS HG G+
Sbjct: 193 AIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTD--LVLCSAMISAYGFHGHGQ 250
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
+A+ +F +M+ G EP++V ++ +L ACSH+GL +EG+ CF+ M Y + P+V+HY C+
Sbjct: 251 KAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCI 310
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GR+G L EA +LI SMP+Q + V+W++LLSA K ++ E A+ + +++ H
Sbjct: 311 VDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDS 370
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLLSN+ A + RW DV+K+R M + + + PG S VE+ ++++F + D SH
Sbjct: 371 ASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQR 430
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
I E + +M +++ GY+PD+S V D++++EK L HS+KLAIAFA + L +G PI
Sbjct: 431 EIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPI 490
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C+DCH KL+S + REI+VRD RFH FKDG CSC DYW
Sbjct: 491 RVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 4/278 (1%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N LI Y K +E A +F +M ++VA+W+A++A ++GL E L F M E
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREG-M 62
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P+E L S+ C L + G+ H ++R+ ++ V +SL MY++CG L G
Sbjct: 63 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 122
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
R + ++ + ISG +G + AL F M G+E + V +V +++CS
Sbjct: 123 ALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ +G + ++ + V +V + R G LG++ + + D+V S +
Sbjct: 183 LAQGQQ-IHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVC--LEYSGTDLVLCSAM 239
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
++ H + P++ L+ +YA
Sbjct: 240 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYA 277
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/529 (38%), Positives = 312/529 (58%), Gaps = 12/529 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + T+I G+V+ + + A ++FE E + ++ A+
Sbjct: 185 GRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVA----RKLFEVMPEKNEVSWTAML 240
Query: 139 KACAKLQALKEGMQIHGHV-FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
+ ++E ++ + K C N++I +G+ +V A +F Q+ +K
Sbjct: 241 MGYTQGGRIEEASELFDAMPVKAVVAC-----NAMILGFGQNGEVAKARQVFDQIREKDD 295
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
+WSA+I + G E L LF M E S L+SVLS C L +LD G+ H
Sbjct: 296 GTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPS-LISVLSVCASLASLDHGRQVHA 354
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
L+++ +V V + LI MYVKCG L K +F + K + ++ +I+G A HG +E
Sbjct: 355 ELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEE 414
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL +F EM G+ D V +VGVLSACS+ G V EGL F+ MK +Y + P +HY C+V
Sbjct: 415 ALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMV 474
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG++ +A++LIQ MP++ + ++W +LL A + H N+ + E+AAK L Q+ +
Sbjct: 475 DLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAG 534
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQ-DRSHPAWD 496
Y+LLSN+YA RW DVA++R M K +++SPG S +EV ++V+ F HP
Sbjct: 535 PYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELS 594
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPI 556
+I +M+ +++ L+ GY PD S VL DVDE+EK L HS++LA+AF L+ + +G PI
Sbjct: 595 SIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPI 654
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+ +NLR+C DCH+ KLI+ I REII+RD RFH FKDG CSCRDYW
Sbjct: 655 RVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 41/356 (11%)
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
A +N+ I + + + E A +++EM ++G+ N F+ +A
Sbjct: 16 AIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREAR-------- 67
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
++F E + N LI+ Y K V A F M +++V SW+A++ + GL SE
Sbjct: 68 YLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSE 127
Query: 216 CLKLFGEMNNEKCWRPEESIL--VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
LF +M PE++++ +L + +D + L + +V+ T+
Sbjct: 128 AETLFWQM-------PEKNVVSWTVMLGGLIQVRRIDEAR----GLFDIMPVKDVVARTN 176
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
+I Y + G L + LF M + ++++ MISG +GQ A +F M E +
Sbjct: 177 MISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM----PEKN 232
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+V + +L + G + E FD M ++ + G G+ G + +A ++
Sbjct: 233 EVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILG-----FGQNGEVAKARQVF 287
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ------INSHHPSDYVLLS 443
+ +++D W +++ KV+ E+ A NLF + S+ PS +LS
Sbjct: 288 DQIR-EKDDGTWSAMI---KVYERKGF-EVEALNLFALMQREGVQSNFPSLISVLS 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 170/402 (42%), Gaps = 62/402 (15%)
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + E + ++RG+V+E EA L+ +M E+ V ++ + +++ +
Sbjct: 101 FDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV----VSWTVMLGGLIQVRRI 156
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
E + F + D+ + ++I+ Y + ++ A +F +M +++V SW+ +I+ +
Sbjct: 157 DEARGL----FDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGY 212
Query: 208 ASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
NG KLF M NE W ++L T G ++ L +
Sbjct: 213 VQNGQVDVARKLFEVMPEKNEVSW-------TAMLMGYTQGGRIE----EASELFDAMPV 261
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
V+ ++I + + G + K +F + +K T+S MI G EAL++F+ M
Sbjct: 262 KAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALM 321
Query: 326 LREGLEPDDVVYVGVLSACS-----------HAGLVNEG---------------LLCFDR 359
REG++ + + VLS C+ HA LV + C D
Sbjct: 322 QREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDL 381
Query: 360 MKLEY---RIVPT-VQHYGCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSA- 411
+K R P + + ++ + G++ EAL++ M + + V + +LSA
Sbjct: 382 VKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSAC 441
Query: 412 ---SKVHHNLEIGE-IAAKNLFQINSHHPSDYVLLSNMYARA 449
KV LEI E + +K L + + H Y + ++ RA
Sbjct: 442 SYTGKVKEGLEIFESMKSKYLVEPKTEH---YACMVDLLGRA 480
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/608 (35%), Positives = 333/608 (54%), Gaps = 46/608 (7%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T++ C + LE K+VHAH F ++ L+ A GS+ A +F +I
Sbjct: 68 TLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYA--KCGSLVDAQMLFDEIP 125
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK----LQAL- 147
+ +NT+I G+ E+A L++EM R DNF++ A+ ++AL
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQGWYMEALD 181
Query: 148 -------------------------------KEGMQIHGHVFKVGFECDLFVQNSLINMY 176
+ G +IHG++ + G E D V +L+++Y
Sbjct: 182 LFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLY 241
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
GKC + A IF QM K + SW+ +I +G E LF ++ RP E
Sbjct: 242 GKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGV-RPNEYTF 300
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VL+AC L A +GK HG + R ++L+ +Y KCG E +F M
Sbjct: 301 AGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPR 360
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
++++ +I G A +GQ AL F +LR G +PD++ +VGVLSAC+HAGLV+ GL
Sbjct: 361 PDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEY 420
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F +K ++ +V T HY CV+DL+ R+G EA +I +MP++ + +W SLL ++H
Sbjct: 421 FHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHG 480
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N+E+ E AAK LF++ +P+ Y+ LSN+YA A W + K+R +M ++G+ + PG S +
Sbjct: 481 NIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWI 540
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
E+ R+V+ F+ D SHP +I+E + ++ ++K EGY D + VL DV+E++K + +
Sbjct: 541 EIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFY 600
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF +I S G+PI++ +NLR C DCH K IS I +R+IIVRD RFH F D
Sbjct: 601 HSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVD 660
Query: 597 GTCSCRDY 604
G+CSC+DY
Sbjct: 661 GSCSCKDY 668
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 45/346 (13%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
F +I F ++ +EA+ + R +P + L AC + + L+ G ++H H
Sbjct: 35 FEEIIELFCQQNRLKEAV----DYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTK 90
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
F + + N LI+MY KC + A +F ++ QK + SW+ +I+ +A+ G + K
Sbjct: 91 ASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARK 150
Query: 219 LFGEMNNEK--CWRPEESILVSVLSACTHLGALDL------------------------- 251
LF EM + W +++ +S ++ ALDL
Sbjct: 151 LFDEMPHRDNFSW---NAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAA 207
Query: 252 -------GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
GK HG LIR+ L+ +V T+L+D+Y KCG L + +F MADK ++++
Sbjct: 208 AISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTT 267
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLE 363
MI G+ KE S+F +++ G+ P++ + GVL+AC+ G M ++
Sbjct: 268 MIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVG 327
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
Y P +V + + G A + MP + + V W SL+
Sbjct: 328 YD--PFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLI 370
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/550 (37%), Positives = 312/550 (56%), Gaps = 24/550 (4%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA-- 136
G + A +F +I EP F +N ++ ++ + E A +++M + N
Sbjct: 51 GKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFS 110
Query: 137 ----------LFKACAKLQALKEGMQIHGHV-----------FKVGFECDLFVQNSLINM 175
LF ++ I G+V F+V + ++I
Sbjct: 111 QNGMMDQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITG 170
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
+ K K+E A F++M K++ +W+A+IA + N LKLF M E +RP S
Sbjct: 171 FMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMV-ESGFRPNPSS 229
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
L SVL C++L AL LGK H + ++ + N+ TSL+ MY KCG LE LF +M
Sbjct: 230 LSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP 289
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
K +T++ MISG A HG G++AL +F +M EG++PD + +V VLSAC+HAG V+ G+
Sbjct: 290 QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIE 349
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+ M +Y + HY CVVDL+GR G L EA++LI+ MP + + ++ +LL A ++H
Sbjct: 350 YFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIH 409
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
NLE+ E AAKNL ++ + YV L+N+YA RW VA +R M + ++PG+S
Sbjct: 410 KNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSW 469
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+EV V++F S DR HP I+E ++++E +++ GY PD+ L DV E++K++ L
Sbjct: 470 IEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILL 529
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIA+ LI + G+PIR+ +NLR+C DCH+ TK IS I R IIVRD RFH F+
Sbjct: 530 RHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFR 589
Query: 596 DGTCSCRDYW 605
G CSC DYW
Sbjct: 590 QGECSCGDYW 599
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 15/166 (9%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA-MHGQGKEALSIFSEM 325
NVI +I +++ G L L +F M K +T++ M++G + G+ K A +F +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
EPD Y +L+ H V L FD+M V + ++ + GM
Sbjct: 64 P----EPDIFSYNIMLACYLHNADVESARLFFDQMP-----VKDTASWNTMISGFSQNGM 114
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
+ +A EL MP+ +N V W +++S +L++ AK LF++
Sbjct: 115 MDQARELFLVMPV-RNSVSWNAMISGYVESGDLDL----AKQLFEV 155
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 330/575 (57%), Gaps = 4/575 (0%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
Q + + +C ++ +HA V+K + + F LV+ G + A +F ++
Sbjct: 143 QSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSM--YFKLGYDEDAQRLFDEM 200
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEG 150
+N+L+ G L + M E G +P+ T ++ ACA + AL EG
Sbjct: 201 PNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEG 260
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+HG V K+G V NSLINMYGK ++ AS +F++M +S+ SW++++ H N
Sbjct: 261 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 320
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + + LF M P+++ +V++L ACT G + H + R ++I+
Sbjct: 321 GYAEKGMDLFNLMKRAGI-NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIII 379
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+++Y K G L +F + D+ + ++ M++G A+H G+EA+ +F M++EG+
Sbjct: 380 ATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 439
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
E D V + +LSACSH+GLV EG F+ M YR+ P + HY C+VDL+GR+G L +A
Sbjct: 440 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 499
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
ELI+SMP++ + VW +LL A +V+ N+E+G+ A+ L ++ +Y++LSN+Y+ A
Sbjct: 500 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 559
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W +K+R M + L ++PG S +E K+++FV D+ HP D I+ + ++ ++
Sbjct: 560 LWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIX 619
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
G +P VL D+DE+ K + + HS+KLAIAF L+ G P+ I +NLR+C DCH+
Sbjct: 620 EAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHS 679
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K S++ +R II+RD KRFH F DG CSCRDYW
Sbjct: 680 TAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 714
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/579 (37%), Positives = 338/579 (58%), Gaps = 12/579 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK C L+ +++H +K GF ++++ S G ++ A +F +
Sbjct: 78 TNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDM--YSKCGRINEAACMFEVMP 135
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N +I G+ E+AL L+ +M E G D FTF + KAC+ L A+KEG Q
Sbjct: 136 VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQ 195
Query: 153 IHGHVFKVGF--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
IH + GF + V +LI++Y KC K+ A +F +++K V SW+A+I +A
Sbjct: 196 IHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQE 255
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G +E ++LF ++ E + + IL S++ + GK H I+ S +++ V
Sbjct: 256 GNLAESMELFRQLR-ESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISV 314
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
S++DMY+KCG + + LF M + ++++VMI+G HG GKEA+ +F EM +
Sbjct: 315 CNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDST 374
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
EPDDV Y+ VL CSH+GLV +G F R+ + I V+HY C+VDL+GRAG L EA
Sbjct: 375 EPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAK 434
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
L+ SMP++ N +W++LLSA +VH +LE+G+ L +++S +P +YV++SN+YA A
Sbjct: 435 NLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMSNIYADAG 494
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W + +IR + SK L + G S VE+ ++V+ F D +HP + I+E++ +ME ++K
Sbjct: 495 YWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEILKEMERRMK 554
Query: 511 FE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI--HLSQGSP-IRIARNLRMCN 566
E GY + L DV+E+ K + L+ HS+KLAI AL+ L +G IR+ +NLR+C
Sbjct: 555 EELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRVFKNLRVCG 614
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH + K +S I +VRD RFHRF+DG CSCRDYW
Sbjct: 615 DCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 14/391 (3%)
Query: 58 GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
GF ++ +++L+ G + AC +F ++ + + L+ G ++ E+L
Sbjct: 2 GFGFDLMLSNDLIVM--YGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLL 59
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
L+++M GV+P++FTF KAC L L G QIH K GF+ V NS+I+MY
Sbjct: 60 LFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYS 119
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
KC ++ A+ +F+ M +++ SW+A+IA + G + L LF +M E +E
Sbjct: 120 KCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKM-QEVGGFLDEFTFT 178
Query: 238 SVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
S L AC+ LGA+ G H LI + ++N V +LID+YVKCG L +F +
Sbjct: 179 STLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE 238
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+K ++++ +I G A G E++ +F ++ ++ D + ++ + LV +G
Sbjct: 239 EKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG-- 296
Query: 356 CFDRMKLEYRIVPT---VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
+M VP+ + ++D+ + GM+ EA L MP +N + W +++
Sbjct: 297 --KQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMP-ARNVISWTVMITGY 353
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
H L I + Q++S P D L+
Sbjct: 354 G-KHGLGKEAIRLFDEMQLDSTEPDDVTYLA 383
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 1/194 (0%)
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+GF DL + N LI MYGKC ++ A +F +M +++V SW+A++ H NG E L L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F +M +P + + L AC L LD+G+ H ++ + +V S+IDMY
Sbjct: 61 FSKMGLSGV-KPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYS 119
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG + + C+F +M + ++++ MI+G + G ++AL +F +M G D+ +
Sbjct: 120 KCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTS 179
Query: 340 VLSACSHAGLVNEG 353
L ACS G + EG
Sbjct: 180 TLKACSDLGAIKEG 193
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/572 (35%), Positives = 319/572 (55%), Gaps = 40/572 (6%)
Query: 73 CALSHWGSMDYACSIFRQIDEPGA----FDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
CA + G ++ I +++ G +N ++ GF + +EA+ ++ ++ G
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
PD T ++ + + L G IHG+V K G D V +++I+MYGK V ++
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 189 FKQMD-----------------------------------QKSVASWSAIIAAHASNGLW 213
F Q + + +V SW++IIA A NG
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+LF EM +P + S+L AC ++ AL G+ THG +R NV V ++
Sbjct: 370 IEALELFREMQVAGV-KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + +F MM K + ++ +++G +MHG+ KE +SIF ++R L+PD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ + +LSAC GL +EG F M EY I P ++HY C+V+L+GRAG L EA +LI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ MP + + VW +LL++ ++ +N+++ EIAA+ LF + +P YVLLSN+YA W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+V IR +M S GL ++PG S ++V +VY ++ D+SHP D I E + ++ +++ G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P++ L DV+E E+ + L GHS+KLA+ F L++ G+P+++ +NLR+C DCH K
Sbjct: 669 HRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS REI +RD RFH FKDG CSC D+W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 195/436 (44%), Gaps = 73/436 (16%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+ HA +LK G + + ++ L+A+ S++ + A + + I +P + F++LI K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIAS--YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
F +++ +++ MF G+ PD+ P LFK CA+L A K G QIH G + D FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN---- 224
Q S+ +MY +C ++ A +F +M K V + SA++ A+A G E +++ EM
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 225 --NEKCWR----------------------------PEESILVSVLSACTHLGALDLGKC 254
N W P++ + SVL + L++G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCG-------------CLEKGLC------------ 289
HG +I+ + V +++IDMY K G +E G+C
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 290 ------LFRMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
+F + ++ ++++ +I+G A +G+ EAL +F EM G++P+ V
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L AC + + G + ++ V ++D+ + G + + + MP
Sbjct: 394 MLPACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP-T 451
Query: 400 QNDVVWRSLLSASKVH 415
+N V W SL++ +H
Sbjct: 452 KNLVCWNSLMNGFSMH 467
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 334/604 (55%), Gaps = 36/604 (5%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCA--------------- 74
T++ C + LE ++VHAH F F ++ L+ A C
Sbjct: 92 TLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHR 151
Query: 75 -LSHW----------GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM- 122
L W G ++ A +F ++ + F +N I G+V + EAL L+ M
Sbjct: 152 DLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQ 211
Query: 123 -FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
ER + FT + A A + L+ G +IHG++ + D V ++L+++YGKC
Sbjct: 212 RHERS-SSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGS 270
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
++ A IF QM + V SW+ +I +G E LF ++ RP E VL+
Sbjct: 271 LDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGV-RPNEYTFAGVLN 329
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC A LGK HG ++ ++L+ MY KCG +F M ++
Sbjct: 330 ACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVS 389
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ +I G A +GQ EAL F +L+ G +PD V YVGVLSAC+HAGLV++GL F +K
Sbjct: 390 WTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIK 449
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
++ ++ T HY CV+DL+ R+G EA +I +MP++ + +W SLL ++H NLE+
Sbjct: 450 EKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELA 509
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
+ AAK L++I +P+ Y+ L+N+YA A W +VA +R +M + G+ + PG S +E+ R+
Sbjct: 510 KRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQ 569
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
V+ F+ D SHP +I+E + ++ ++K EGY PD + VL DV+E++K + L HS+KL
Sbjct: 570 VHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKL 629
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
A+ F +I G+PI++ +NLR C DCHT K IS I +R+I VRD RFH F+DG+CSC
Sbjct: 630 AVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSC 689
Query: 602 RDYW 605
+DYW
Sbjct: 690 KDYW 693
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 31/248 (12%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P + L AC + +AL+ G ++H H F +F+ N L++MY KC + A +
Sbjct: 85 PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCW-----------RPEESI 235
F +M + + SW+ +I +A G + KLF EM + W +P E++
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREAL 204
Query: 236 -LVSVLS-----------------ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
L V+ A + L LGK HG LIR L+ +V ++L+D+
Sbjct: 205 ELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDL 264
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L++ +F M D+ ++++ MI G+ +E +F ++++ G+ P++ +
Sbjct: 265 YGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTF 324
Query: 338 VGVLSACS 345
GVL+AC+
Sbjct: 325 AGVLNACA 332
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
RP + ++++AC AL+LG+ H + V + L+DMY KCG L
Sbjct: 84 RPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQM 143
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
LF M + +++ MI G A G+ ++A +F EM
Sbjct: 144 LFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM 179
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 317/572 (55%), Gaps = 28/572 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
K++H+ V++ G + +LV A C L + A +F + E + L+
Sbjct: 282 KELHSWVIRSGLVLDLCVGCSLVDMYAKCGL-----VQEARKVFDGMREHNVMSWTALVN 336
Query: 105 GFVKE---VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
G+V+ E E N + + GV P+ FTF + KACA L G Q+HG K+G
Sbjct: 337 GYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLG 396
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
V N L+++Y K ++E A F + +K++ S + + + +K F
Sbjct: 397 LSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN---------VKDFN 447
Query: 222 EMNNEKCWRPEESI--------LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
+ + R E + S+LS +G + G+ H +++ ++ V +
Sbjct: 448 LNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNA 507
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI MY KCG E L +F M D +T++ +I+G A HG +AL +F ML G++P+
Sbjct: 508 LISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPN 567
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV Y+ VLSACSH GL++E F M+ + IVP ++HY C+VDL+GR+G+L EA+E I
Sbjct: 568 DVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFI 627
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
SMP + +VWR+ L + +VH N ++GE AAK + + H P+ Y+LLSN+YA RW
Sbjct: 628 NSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWE 687
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
DVA IR M K + + G S +EV +V+KF D HP IYE + ++ ++K G
Sbjct: 688 DVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVG 747
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y P+ VL DV++++K + L HS+KLA+AFALI PIR+ +NLR+C DCHT K
Sbjct: 748 YVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIK 807
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS++ REI+VRD RFH KDGTCSC DYW
Sbjct: 808 YISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 146/272 (53%), Gaps = 10/272 (3%)
Query: 84 ACSIFRQIDEP--GAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKA 140
A SIF+ ++ ++++I F +A+ +++++ + GV P+ + F A+ +A
Sbjct: 106 AFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRA 165
Query: 141 CAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGK-CEKVEFASA--IFKQMDQKS 196
C K K G+ + G V K G F+ + V LI+M+ K C + SA +F +M +K+
Sbjct: 166 CLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKN 225
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V +W+ +I A G E + LF EM + P+ L ++S C + L LGK H
Sbjct: 226 VVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELH 285
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG- 315
+IR+ L++ V SL+DMY KCG +++ +F M + ++++ +++G G G
Sbjct: 286 SWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGY 345
Query: 316 -KEALSIFSEMLRE-GLEPDDVVYVGVLSACS 345
+EA+ +FS ML + G+ P+ + GVL AC+
Sbjct: 346 EREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 41/302 (13%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
T L K C + + G +H + D + NSLI +Y K A +IF+ M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 193 D--QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+ ++ V S+S+II+ A+N + +++F ++ + P E +V+ AC G
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 251 LGKCTHGSLIRN-ISALNVIVETSLIDMYVKCGC----LEKGLCLFRMMADKCQLTYSVM 305
G C G +++ +V V LIDM+VK GC LE +F M +K +T+++M
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVK-GCSLADLESARKVFDKMREKNVVTWTLM 232
Query: 306 ISGLAMHGQGKEALSIFSEML-REGLEPDDVVYVGVLSACS-----------HAGLVNEG 353
I+ LA +G EA+ +F EML G PD G++S C+ H+ ++ G
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292
Query: 354 L---LCFDRMKLEYRIVPTVQHYGC-VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
L LC GC +VD+ + G++ EA ++ M + N + W +L+
Sbjct: 293 LVLDLCV----------------GCSLVDMYAKCGLVQEARKVFDGMR-EHNVMSWTALV 335
Query: 410 SA 411
+
Sbjct: 336 NG 337
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/610 (35%), Positives = 342/610 (56%), Gaps = 44/610 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMD-YACSIFRQID 92
++ L C NL + K++H HVL+ G + + + L+ T L+ G MD Y + +
Sbjct: 54 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRT--LTKLGVPMDPYPRRVIEPVQ 111
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F + +IRG+ E +F+EA+ +Y M + + P +FTF AL KAC + L G Q
Sbjct: 112 FRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQ 171
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG- 211
H F++ C ++V N++I+MY KC + A +F +M ++ V SW+ +IAA+A G
Sbjct: 172 FHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGN 231
Query: 212 -----------------LWS-------------ECLKLFGEMNNEKCWRPEESILVSVLS 241
W+ E L+ F M R +E + +S
Sbjct: 232 MESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RADEVTVAGYIS 290
Query: 242 ACTHLGALDLGKCTHGSLIRNISALN----VIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
AC LGA I S + V++ ++LIDMY KCG +E+ + +F M +K
Sbjct: 291 ACAQLGASKYAD--RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNK 348
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+YS MI GLA HG+ +EAL +F M+ + ++P+ V +VG L+ACSH+GLV++G
Sbjct: 349 NVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQV 408
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M + + PT HY C+VDL+GRAG L EALELI++M ++ + VW +LL A ++H+
Sbjct: 409 FASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 468
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS-L 475
N +I EIAA++LF++ +Y+LLSN+Y+ A W V +R + KGL ++P S +
Sbjct: 469 NPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWV 528
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
V+ +++KF + +HP I + + ++ +L GY PD+S V DV ++ KR L
Sbjct: 529 VDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRLILI 588
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
H++KLA+AF+L+ ++ I+I +NLRMC DCH + +L S + R II+RD RFH F+
Sbjct: 589 QHTEKLALAFSLLTTNRDYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRFHHFR 648
Query: 596 DGTCSCRDYW 605
G CSC D+W
Sbjct: 649 SGACSCGDFW 658
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/590 (35%), Positives = 344/590 (58%), Gaps = 38/590 (6%)
Query: 16 PEEPPKGPELNLRLKEQECLTI--LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC 73
P+ P + +++ + E L I L+ + E ++VHA ++K + + + C
Sbjct: 11 PQSPNRNQIHHVKPQSSETLKIDLLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVC 70
Query: 74 ALSHWGSMDYACSIFRQIDE--PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
A + S YA IF +++ P F +N+ ++ + +A+ L+ + + V PD
Sbjct: 71 AFT--PSFHYAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDT 128
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV--------- 182
FT ++ +AC L L G +HG V KVGF +L++QN ++++Y C ++
Sbjct: 129 FTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEK 188
Query: 183 ----------------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
E A +F +M +++V SW+++IA + G E + LF
Sbjct: 189 MPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLF 248
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+M E + E +V+VL+AC LGALDLG H R+ NV + +LIDMYVK
Sbjct: 249 AKM-EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 307
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CGCLE+ +F M ++ +++S MI GLAMHG+ +EAL +FS+M + G+EP+ V ++G+
Sbjct: 308 CGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGL 367
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L ACSH GL++EG F M +Y I+P ++HYGC+VDL+ RAG+L EA E I +MP++
Sbjct: 368 LHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKP 427
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
N VVW +LL A +VH N+E+ E A K+L +++ + YV+LSN+YA A RW D A++R
Sbjct: 428 NGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRK 487
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M + + ++PG+S + V V++FV+ + SHP + I++ ++ +++ +GY P+ S
Sbjct: 488 FMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSV 547
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
VL D++E EK + + HS+KLA+ F L++ +PIRI +NLR+C DCH+
Sbjct: 548 VLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHS 597
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 316/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILK C F +++H ++K + + LV A +H+ +D A +F +
Sbjct: 215 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDAMKVFDWMS 272
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N LI G +EA ++ + + G+ + T A+ K+ A L+A Q
Sbjct: 273 HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQ 332
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K+GF D V N LI+ Y KC + A +F++ + + +++I A +
Sbjct: 333 VHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH 392
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+KLF EM K P+ +L S+L+AC L A + GK H LI+ +
Sbjct: 393 GEGAIKLFMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 451
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ Y KCG +E F + ++ +++S MI GLA HG GK AL +F M+ EG+ P
Sbjct: 452 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 511
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + VL AC+HAGLV+E F+ MK + I T +HY C++DL+GRAG L +A+EL
Sbjct: 512 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 571
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ SMP Q N VW +LL AS+VH + E+G++AA+ LF + +VLL+N YA + W
Sbjct: 572 VNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMW 631
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VAK+R M + + P S VEV KV+ F+ D+SHP IY + ++ +
Sbjct: 632 NEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKA 691
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P++ L D+D EK L HS++LA+AFAL+ G+PIR+ +NLR+C DCH
Sbjct: 692 GYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAF 751
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REII+RD RFH F+DGTCSC DYW
Sbjct: 752 KFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 163/311 (52%), Gaps = 4/311 (1%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI-DEP 94
+LK + + +VHA + GF + F A+ LVA +G MD A +F + E
Sbjct: 15 VVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFDEAGSER 72
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A +N L+ +VK + +A+ ++ EM G++P F F + AC + + G Q+H
Sbjct: 73 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 132
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V ++G+E D+F N+L++MY K +V+ AS IF++M V SW+A+I+ NG
Sbjct: 133 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 192
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
++L +M + P +L S+L AC GA DLG+ HG +I+ + + + L
Sbjct: 193 RAIELLLQMKSSGL-VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGL 251
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY K L+ + +F M+ + + ++ +ISG + G+ EA SIF + +EGL +
Sbjct: 252 VDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNR 311
Query: 335 VVYVGVLSACS 345
VL + +
Sbjct: 312 TTLAAVLKSTA 322
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 13/294 (4%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M GV + F P + K Q G Q+H GF D+FV N+L+ MYG
Sbjct: 1 MRAEGVCCNEFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 182 VEFASAIFKQM-DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW---RPEESILV 237
++ A +F + +++ SW+ +++A+ N + +++FGEM W +P E
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM----VWSGIQPTEFGFS 113
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
V++ACT +D G+ H ++R +V +L+DMYVK G ++ +F M D
Sbjct: 114 CVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 173
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ +ISG ++G A+ + +M GL P+ + +L AC+ AG + G
Sbjct: 174 DVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIH 233
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
M G +VD+ + L +A+++ M ++ ++W +L+S
Sbjct: 234 GFMIKANADSDDYIGVG-LVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISG 285
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/519 (36%), Positives = 297/519 (57%), Gaps = 1/519 (0%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F ++ E +N +I + L L+ EM + G + + + L
Sbjct: 491 LFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 550
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ G QIH + +G + + N+LI+MY KC ++ A + F +KS SW+A+I
Sbjct: 551 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 610
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ NG E L+LF +M RP+ + S++ A + L + LG+ H LIR+
Sbjct: 611 YVQNGQHEEALQLFSDMRRAGL-RPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKS 669
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+V + L+DMY KCGCL++ L F M ++ ++++ +IS A +G+ K A+ +F ML
Sbjct: 670 SVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGML 729
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G PD V ++ VL+ACSH GL +E + F MK +Y I P +HY CV+D +GR G
Sbjct: 730 HCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCF 789
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
+ +++ MP + + ++W S+L + ++H N E+ +AA LF + + YV+LSN+Y
Sbjct: 790 SQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIY 849
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
ARA +W D A ++ M +G+ + G+S VE+ +K+Y F S D + P D I + + ++
Sbjct: 850 ARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLY 909
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
++ +GY PDI+ L VD + K E LK HS++LAIAFAL++ G+PIRI +NL C
Sbjct: 910 KEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACL 969
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K+IS I R+IIVRD +RFH FKDG CSC DYW
Sbjct: 970 DCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 160/315 (50%), Gaps = 17/315 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++ + ++ K++HA ++ G + L+ S G +D A S F E
Sbjct: 542 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDM--YSKCGMLDAAKSNFSNRSEK 599
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A + LI G+V+ + EEAL L+++M G+ PD TF ++ KA + L + G Q+H
Sbjct: 600 SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLH 659
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
++ + G++ +F + L++MY KC ++ A F +M +++ SW+A+I+A+A G
Sbjct: 660 SYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAK 719
Query: 215 ECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKC-THGSLIRNISALNVIVE- 271
+K+F M + C + P+ +SVL+AC+H G D +C + L+++ +++ E
Sbjct: 720 NAIKMFEGMLH--CGFNPDSVTFLSVLAACSHNGLAD--ECMKYFHLMKHQYSISPWKEH 775
Query: 272 -TSLIDMYVKCGC---LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ID + GC ++K L AD + ++ ++ +HG + A ++
Sbjct: 776 YACVIDTLGRVGCFSQVQKMLVEMPFKADP--IIWTSILHSCRIHGNQELARVAADKLF- 832
Query: 328 EGLEPDDVVYVGVLS 342
G+EP D +LS
Sbjct: 833 -GMEPTDATPYVILS 846
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 51/357 (14%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
NL+ + A S G + A +F A + ++R +AL L+ M GV
Sbjct: 292 NLILS-AYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGV 350
Query: 128 EPDNFTFPALFK--ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
PD T + C +H K G + +FV N+L++ Y K + A
Sbjct: 351 IPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAA 403
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F +M K +++A++ + GL ++ L+LF M R
Sbjct: 404 RRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSR--------------- 448
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L L + +H S R+ S LNV V SL+D Y KC CL+ LF M ++ ++Y+V+
Sbjct: 449 -HPLHLLQYSH-SRSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 506
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGL 354
I+ A + L +F EM + G + + Y +LS HA LV GL
Sbjct: 507 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 566
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
D + ++D+ + GML A + +++ + W +L++
Sbjct: 567 ASEDLLG------------NALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALITG 610
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++F N +++ Y + A +F ++ +W+ ++ AHA+ G S+ L LF M
Sbjct: 287 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAML 346
Query: 225 NEKCWRPEESILVSVLS--ACT----HLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
E P+ + +VL+ CT H A+ G TH V V +L+D Y
Sbjct: 347 GEGVI-PDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTH-----------VFVCNTLLDAY 394
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
K G L +F M DK +TY+ M+ G + G +AL +F+ M R G
Sbjct: 395 CKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAG 445
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+NI +LN+I+ Y G L LF + T+++M+ A G+ +ALS
Sbjct: 286 KNIFSLNLILSA-----YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALS 340
Query: 321 IFSEMLREGLEPDDVVYVGVLS 342
+F ML EG+ PD V VL+
Sbjct: 341 LFRAMLGEGVIPDRVTVTTVLN 362
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 333/576 (57%), Gaps = 33/576 (5%)
Query: 48 KKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD-------- 98
+++H L+ G F + +CAS L+ M + C FR +D AFD
Sbjct: 108 RQLHLLALRSGLFPSDAYCASALL---------HMYHHC--FRPLDARRAFDEIPTPNPV 156
Query: 99 -FNTLIRGFVKEVEFEEALFLYNEMFERGVEP--DNFTFPALFKACAKLQALKEGMQIHG 155
+ G ++ L ++ M G D A A++ IH
Sbjct: 157 IVTAMASGCMRNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHA 216
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASA--IFKQMDQKSVASWSAIIAAHASNGLW 213
V K+G + V N++I+ Y K + +A +F MD + V SW+ +IA +A NGL
Sbjct: 217 LVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMMD-RDVVSWNTMIALYAQNGLS 275
Query: 214 SECLKLFGEM----NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+E L L+ +M + +C L +VL AC H GA+ GK H ++R NV
Sbjct: 276 TEALGLYSKMLIVGGDVRC---NAVTLSAVLLACAHAGAIQTGKRIHNQVVRMGLEDNVY 332
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V TS++DMY KCG +E F+ + K L++S MI+G MHG G+EAL +F++M + G
Sbjct: 333 VGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRKSG 392
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L+P+ + ++ VL+ACSHAGL++EG ++ MK E+ I P V+HYGC+VDL+GRAG L EA
Sbjct: 393 LKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLDEA 452
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
LI+ M ++ + +W +LLSA +++ N+E+ +I A+ LF++++ + YVLLSN+YA A
Sbjct: 453 YGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYAEA 512
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
W +V ++R + ++G+ + PG+S VE+ K + F D+SHP + IY + ++ ++
Sbjct: 513 GMWKEVERMRVLVKTRGIEKPPGYSSVELKGKTHLFYVGDKSHPQYKEIYAYLEKLLERI 572
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
GY P+ VL D+D +E+ L+ HS+KLA+AFAL++ QGS I + +NLR+C DCH
Sbjct: 573 HDAGYVPNTGSVLHDLDVEERESMLRIHSEKLAVAFALMNSVQGSVIHVIKNLRVCTDCH 632
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K+I+ + REII+RD KRFH FKDG CSC DYW
Sbjct: 633 AAIKIITKLTGREIIIRDLKRFHHFKDGLCSCGDYW 668
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/631 (35%), Positives = 345/631 (54%), Gaps = 51/631 (8%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
+L +R + +L C ++ + K+VH + L+ G F + F + +V A G
Sbjct: 224 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKC--GM 281
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER--------------- 125
M+ A +F ++ +N ++ G+ + F++AL L+ ++ E
Sbjct: 282 MEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAG 341
Query: 126 --------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
G EP+ T +L CA L G + H H K D
Sbjct: 342 YAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLD 401
Query: 166 -------LFVQNSLINMYGKCEKVEFASAIFKQMDQK--SVASWSAIIAAHASNGLWSEC 216
L V N+LI+MY KC+ + A A+F + K SV +W+ +I +A +G +E
Sbjct: 402 ENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEA 461
Query: 217 LKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSL 274
L+LF +M + P + L AC LGAL G+ H ++RN + + V L
Sbjct: 462 LELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCL 521
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY K G ++ +F M + ++++ +++G MHG+G+EAL IF EM + GL PD
Sbjct: 522 IDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDG 581
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V +V VL ACSH+G+V++G+ F+ M ++ +VP +HY C+VDL+ RAG L EA+ELI+
Sbjct: 582 VTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIR 641
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP++ VW +LLSA +V+ N+E+GE AA L ++ S + Y LLSN+YA A+ W D
Sbjct: 642 GMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKD 701
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
VA+IR M + G+ + PG S V+ + F + D SHP IY+++ + ++K GY
Sbjct: 702 VARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGY 761
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD L DVD++EK + L HS+KLA+A+ ++ + G+PIRI +NLR C DCH+
Sbjct: 762 VPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTY 821
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS+I E EIIVRD RFH FK+G+CSCR YW
Sbjct: 822 ISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 18/365 (4%)
Query: 11 LLLTQPEEPPKGPELNLRL--------KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWN 62
+L++ P PK P L L T+ CK+L + +H +L G +
Sbjct: 1 MLISLPRLKPKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAELIHQQLLVQGLPHD 60
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPG--AFDFNTLIRGFVKEVEFEEALFLYN 120
P ++ T + S A S+ R++ F +N LIR V E+ L LY
Sbjct: 61 PTHIISMYLT-----FNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYR 115
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M G PD++TFP + KAC ++ + + G +H VF GFE ++FV N L++MYG+C
Sbjct: 116 RMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG 175
Query: 181 KVEFASAIFKQMDQKSVA---SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
E A +F +M ++ V SW++I+AA+ G +K+F M + RP+ LV
Sbjct: 176 AWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 235
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VL AC +GA GK HG +R+ +V V +++DMY KCG +E+ +F M K
Sbjct: 236 NVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK 295
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ M++G + G+ +AL +F ++ E +E + V + V++ + GL E L F
Sbjct: 296 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVF 355
Query: 358 DRMKL 362
+M+L
Sbjct: 356 RQMRL 360
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 279/443 (62%), Gaps = 1/443 (0%)
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
E L ++I Y K ++ A +F ++++ W+ +I +A +GL +E L LF +
Sbjct: 3 EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M N K RP E +++VLSAC GAL+ G+ H + N +NV V TSLIDMY KCG
Sbjct: 63 MLNAKV-RPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCG 121
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
LE +F +++K + ++ M+ G AMHG ++AL +F EM G +P D+ ++GVL+
Sbjct: 122 SLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLN 181
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSHAGLV+EG F MK EY I P V+HYGC+V+L+GRAG L EA EL+++M I Q+
Sbjct: 182 ACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDP 241
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
V+W +LL A ++H N+ +GE A+ L N + YVLLSN+YA A W VA++RT M
Sbjct: 242 VLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLM 301
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G + PG S +EV KV++F++ D HP IYEM+ ++ LK GY+P VL
Sbjct: 302 KESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHGYTPQTDIVL 361
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
D+++ +K L HS+KLA+AF LI G+ I+I +NLR+C DCH TKLIS I R+
Sbjct: 362 HDLEDAQKERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCADCHAVTKLISKITGRK 421
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
+++RDR RFH F +G CSC DYW
Sbjct: 422 VVMRDRNRFHHFVNGLCSCGDYW 444
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 12/249 (4%)
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN 131
TC + +G +D A +F ++E A +N +I G+ + E L L+ +M V P+
Sbjct: 14 TC-YAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNE 72
Query: 132 FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ 191
T A+ AC + AL+ G +H ++ G ++ V SLI+MY KC +E A +F++
Sbjct: 73 VTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFER 132
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC---WRPEESILVSVLSACTHLGA 248
+ K V +W++++ +A +G + L+LF EM C ++P + + VL+AC+H G
Sbjct: 133 ISNKDVVAWNSMVVGYAMHGFSQDALRLFKEM----CMIGYQPTDITFIGVLNACSHAGL 188
Query: 249 LDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVM 305
+ G S+ ++ + VE ++++ + G LE+ L + M D+ + + +
Sbjct: 189 VSEGWKFFYSM-KDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTL 247
Query: 306 ISGLAMHGQ 314
+ +HG
Sbjct: 248 LGACRLHGN 256
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 316/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILK C F +++H ++K + + LV A +H+ +D A +F +
Sbjct: 308 SILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF--LDDAMKVFDWMS 365
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N LI G +EA ++ + + G+ + T A+ K+ A L+A Q
Sbjct: 366 HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQ 425
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H K+GF D V N LI+ Y KC + A +F++ + + +++I A +
Sbjct: 426 VHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDH 485
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+KLF EM K P+ +L S+L+AC L A + GK H LI+ +
Sbjct: 486 GEGAIKLFMEML-RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGN 544
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ Y KCG +E F + ++ +++S MI GLA HG GK AL +F M+ EG+ P
Sbjct: 545 ALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINP 604
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + VL AC+HAGLV+E F+ MK + I T +HY C++DL+GRAG L +A+EL
Sbjct: 605 NHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMEL 664
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ SMP Q N VW +LL AS+VH + E+G++AA+ LF + +VLL+N YA + W
Sbjct: 665 VNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMW 724
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VAK+R M + + P S VEV KV+ F+ D+SHP IY + ++ +
Sbjct: 725 NEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKA 784
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P++ L D+D EK L HS++LA+AFAL+ G+PIR+ +NLR+C DCH
Sbjct: 785 GYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAF 844
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REII+RD RFH F+DGTCSC DYW
Sbjct: 845 KFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 877
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 163/311 (52%), Gaps = 4/311 (1%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI-DEP 94
+LK + + +VHA + GF + F A+ LVA +G MD A +F + E
Sbjct: 108 VVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAM--YGGFGFMDDARRVFDEAGSER 165
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A +N L+ +VK + +A+ ++ EM G++P F F + AC + + G Q+H
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 225
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V ++G+E D+F N+L++MY K +V+ AS IF++M V SW+A+I+ NG
Sbjct: 226 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
++L +M + P +L S+L AC GA DLG+ HG +I+ + + + L
Sbjct: 286 RAIELLLQMKSSGL-VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGL 344
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY K L+ + +F M+ + + ++ +ISG + G+ EA SIF + +EGL +
Sbjct: 345 VDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNR 404
Query: 335 VVYVGVLSACS 345
VL + +
Sbjct: 405 TTLAAVLKSTA 415
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 175/384 (45%), Gaps = 23/384 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC---SIFRQI 91
LT + L +HA++LK GF + + +S + C +F +I
Sbjct: 11 LTRYAAAQALLPGAHLHANLLKSGFLAS-------LRNHLISFYSKCRRPCCARRVFDEI 63
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+P +++L+ + A+ ++ M GV + F P + K Q G
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GA 120
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWSAIIAAHASN 210
Q+H GF D+FV N+L+ MYG ++ A +F + +++ SW+ +++A+ N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 211 GLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ +++FGEM W +P E V++ACT +D G+ H ++R +
Sbjct: 181 DQCGDAIQVFGEM----VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 236
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +L+DMYVK G ++ +F M D ++++ +ISG ++G A+ + +M
Sbjct: 237 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKS 296
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
GL P+ + +L AC+ AG + G M G +VD+ + L
Sbjct: 297 SGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVG-LVDMYAKNHFLD 355
Query: 388 EALELIQSMPIQQNDVVWRSLLSA 411
+A+++ M ++ ++W +L+S
Sbjct: 356 DAMKVFDWMS-HRDLILWNALISG 378
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/653 (32%), Positives = 341/653 (52%), Gaps = 74/653 (11%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P E ++++ K + + ++HA ++ + + L+++ +L
Sbjct: 75 PPTTPT------EAHFISLIHGSKTILQLHQIHAQIIIHNLSSSSLITTQLISSSSLRK- 127
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
S++++ ++F F FN LIRG F A+F + M G++PD T+P +
Sbjct: 128 -SINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVL 186
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV---------------- 182
K+ A L + + GM IH + + G E D FV+ SL++MY K EK+
Sbjct: 187 KSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDS 246
Query: 183 --------------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ A +FK M +K SWS +I A NG ++LF +
Sbjct: 247 GSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKENVSWSTLIDGFAKNGDMDRAMELFDQ 306
Query: 223 M--NNEKCW----------------------------RPEESILVSVLSACTHLGALDLG 252
M N W RP +VS LSAC +G L+ G
Sbjct: 307 MPEKNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAG 366
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
H + N L + T+L+DMY KCG +E +F K T++VMI G A+H
Sbjct: 367 LRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIH 426
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G ++A++ F +M+ G++PD+VV++ +L+AC H+G V+ GL FD M+L+Y I P+++H
Sbjct: 427 GHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKH 486
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQIN 432
Y +VD++GR+G L EAL I+ MP+ + V+W +L A + H ++ + A L ++
Sbjct: 487 YTLIVDMLGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLE 546
Query: 433 SHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSH 492
H +Y+ LSN YA +W D ++R M ++G++++ G+S +EV +V++FVS D H
Sbjct: 547 PTHTGNYIFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDH 606
Query: 493 PAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ 552
I + ++ +GY P VL +++++EK + L H +KLA+AFALI S
Sbjct: 607 KDSKAICLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSP 666
Query: 553 GSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G IRI +NL++C DCH+ K S I +REI++RD KRFH FKDG+CSCRD+W
Sbjct: 667 GMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/576 (36%), Positives = 327/576 (56%), Gaps = 14/576 (2%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
ILK C K L + K HA +L G + ++ L+ S GS+D+A +F ++
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINM--YSKCGSVDFARQVFDEMPS 127
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT+I + E EAL L +M G FT ++ ACA AL E +
Sbjct: 128 RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL 187
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K + ++FV +L+++Y KC ++ A +F+ M +SV +WS++ A + N ++
Sbjct: 188 HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247
Query: 214 SECLKLFGEMNNEKCW----RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L LF K W + ++ ++ SV+ AC L A+ GK + L ++ N+
Sbjct: 248 EQALALF-----RKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIF 302
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +SLIDMY KCG +E+ +FR + + + ++ MISGL+ H + E + +F +M + G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L P+DV +V VLSAC H GLV +G FD M E+ + P V HY C+VD + RAG + EA
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+LI +P + +W SLL++ + H NLE+ E+AAK LF I H+ +Y+LLSNMYA
Sbjct: 423 YDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAAN 482
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W +VAK+R + + + G S +E+ KV+ F+ +R+HP IY ++++ +L
Sbjct: 483 GKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDEL 542
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
+ GY + L V E K+E L+ HS+KLA L+ L +PIRI +NLR+C DCH
Sbjct: 543 QKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCH 602
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ KL S + R++IVRD RFH FK+G CSC D+W
Sbjct: 603 SFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
S + +L C L GK H ++ +++ LI+MY KCG ++ +F
Sbjct: 65 SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + ++++ MI L +G+ EAL + +M REG + VL AC+ ++E
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L ++ + V ++D+ + G++ +A+ + +SMP ++ V W S+
Sbjct: 185 QL-LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/576 (36%), Positives = 327/576 (56%), Gaps = 14/576 (2%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
ILK C K L + K HA +L G + ++ L+ S GS+D+A +F ++
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINM--YSKCGSVDFARQVFDEMPS 127
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+NT+I + E EAL L +M G FT ++ ACA AL E +
Sbjct: 128 RSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLL 187
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K + ++FV +L+++Y KC ++ A +F+ M +SV +WS++ A + N ++
Sbjct: 188 HAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMY 247
Query: 214 SECLKLFGEMNNEKCW----RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L LF K W + ++ ++ SV+ AC L A+ GK + L ++ N+
Sbjct: 248 EQALALF-----RKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIF 302
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +SLIDMY KCG +E+ +FR + + + ++ MISGL+ H + E + +F +M + G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L P+DV +V VLSAC H GLV +G FD M E+ + P V HY C+VD + RAG + EA
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+LI +P + +W SLL++ + H NLE+ E+AAK LF I H+ +Y+LLSNMYA
Sbjct: 423 YDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAAN 482
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W +VAK+R + + + G S +E+ KV+ F+ +R+HP IY ++++ +L
Sbjct: 483 GKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDEL 542
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
+ GY + L V E K+E L+ HS+KLA L+ L +PIRI +NLR+C DCH
Sbjct: 543 QKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCH 602
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ KL S + R++IVRD RFH FK+G CSC D+W
Sbjct: 603 SFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
S + +L C L GK H ++ +++ LI+MY KCG ++ +F
Sbjct: 65 SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + ++++ MI L +G+ EAL + +M REG + VL AC+ ++E
Sbjct: 125 MPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 184
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L ++ + V ++D+ + G++ +A+ + +SMP ++ V W S+
Sbjct: 185 QL-LHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSM 237
>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/641 (34%), Positives = 338/641 (52%), Gaps = 73/641 (11%)
Query: 34 CLTILK---TCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
C T+L+ + K+ + K++HA +L+ +P S +++ S+ + + IF
Sbjct: 8 CKTLLQNPSSVKSKSQAKQLHAQILRTSL-PSPSLLSTILSI--YSNLNLLHDSLLIFNS 64
Query: 91 I-DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+ P + ++IR + F +L + +M G PD+ FP++ K+C ++ L+
Sbjct: 65 LPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRF 124
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA---------------------- 187
G +HG + ++G DL+ N+L+NMY K +E +
Sbjct: 125 GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESY 184
Query: 188 -------IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+F+ M ++ + SW+ +I+ +A NG+ + L + EM N RP+ L SVL
Sbjct: 185 YLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADL-RPDSFTLSSVL 243
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
L GK HG IRN +V + +SLIDMY KC ++ +F M+ +
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303
Query: 301 TYSVMISGLAMHGQGKEALSIFSEML---------------------------------- 326
+++ +I+G +G E L F +ML
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363
Query: 327 --REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
EG++P+ V ++ VL+ACSHAGLV+E F+ M +YRI+P ++HY V DL+GR G
Sbjct: 364 IRMEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVG 423
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA E I M I+ VW +LL+A +VH N+E+ E +K LF ++ + YVLLSN
Sbjct: 424 RLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 483
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+Y+ A RW D K+R M KG+ + P S +E+ KV+ FV+ D+SHP +D I E +
Sbjct: 484 IYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKV 543
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ Q++ EGY D ++VL DV+E++KR L HS++LAI F +I G+ IR+ +NLR+
Sbjct: 544 LLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRV 603
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCHT TK IS I REI+VRD RFH FKDG CSC D+W
Sbjct: 604 CVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/629 (36%), Positives = 344/629 (54%), Gaps = 47/629 (7%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCAL-- 75
+L +R + +L C ++ + K+VH + L+ G F + F + +V A C +
Sbjct: 243 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMME 302
Query: 76 ------------------------SHWGSMDYACSIFRQIDEP----GAFDFNTLIRGFV 107
S G D A +F +I E ++ +I G+
Sbjct: 303 EANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 362
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD-- 165
+ EAL ++ +M G EP+ T +L CA L G + H H K D
Sbjct: 363 QRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEN 422
Query: 166 -----LFVQNSLINMYGKCEKVEFASAIFKQMDQK--SVASWSAIIAAHASNGLWSECLK 218
L V N+LI+MY KC+ + A A+F + K SV +W+ +I +A +G +E L+
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482
Query: 219 LFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN-ISALNVIVETSLID 276
LF +M + P + L AC LGAL G+ H ++RN + + V LID
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY K G ++ +F M + ++++ +++G MHG+G+EAL IF EM + L PD V
Sbjct: 543 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVT 602
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V VL ACSH+G+V++G+ F+ M ++ +VP +HY C+VDL+ RAG L EA+ELI+ M
Sbjct: 603 FVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 662
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P++ VW +LLSA +V+ N+E+GE AA L ++ S + Y LLSN+YA A+ W DVA
Sbjct: 663 PMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVA 722
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
+IR M + G+ + PG S V+ + F + D SHP IY+++ + ++K GY P
Sbjct: 723 RIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVP 782
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
D L DVD++EK + L HS+KLA+A+ ++ + G+PIRI +NLR C DCH+ IS
Sbjct: 783 DNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYIS 842
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+I E EIIVRD RFH FK+G+CSCR YW
Sbjct: 843 IIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 184/365 (50%), Gaps = 18/365 (4%)
Query: 11 LLLTQPEEPPKGPELNLRL--------KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWN 62
+L++ P PK P L L T+ CK+L + H +L G +
Sbjct: 20 MLISLPRLKPKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAELTHQQLLVQGLPHD 79
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPG--AFDFNTLIRGFVKEVEFEEALFLYN 120
P ++ T + S A S+ R++ F +N LIR V E+ L LY
Sbjct: 80 PTHIISMYLT-----FNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYR 134
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M G PD++TFP + KAC ++ + + G +H VF GFE ++FV N L++MYG+C
Sbjct: 135 RMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG 194
Query: 181 KVEFASAIFKQMDQKSVA---SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
E A +F +M ++ V SW++I+AA+ G +K+F M + RP+ LV
Sbjct: 195 AWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLV 254
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VL AC +GA GK HG +R+ +V V +++DMY KCG +E+ +F M K
Sbjct: 255 NVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVK 314
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ M++G + G+ +AL +F ++ E +E + V + V++ + GL E L F
Sbjct: 315 DVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVF 374
Query: 358 DRMKL 362
+M L
Sbjct: 375 RQMLL 379
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/599 (36%), Positives = 333/599 (55%), Gaps = 37/599 (6%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L +CK+L ++HA ++ GF + ++L+ +L H D A S+F P
Sbjct: 58 LLSSCKHLNPLLQIHAQIIVSGF-KHHHSITHLINLYSLFH--KCDLARSVFDSTPNPSR 114
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHG 155
+N++IR + + ++ EAL +Y M E+G +E D F L +K+ LK +
Sbjct: 115 ILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRARE--- 171
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
VF + D+ N++I + E A +F QM + SW ++A +A NG + E
Sbjct: 172 -VFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 230
Query: 216 CLKLFGEMN-NEKCWR----------------------------PEESILVSVLSACTHL 246
L+LF +M W P VSVL A +L
Sbjct: 231 VLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYL 290
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
A G H +I+ N +V SLIDMY KCG L+ LF M K ++++ M+
Sbjct: 291 AAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAML 350
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
SG A+HG G A+++FS M ++ D V +V VLSAC HAGLV EG F M +Y I
Sbjct: 351 SGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHI 410
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P ++HY C+VDL+GRAG+ E L I+ MP++ + VW +LL + ++H N+++GE+A
Sbjct: 411 KPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALD 470
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
+L ++ +P+ +V+LS++YA++ RW D K R++M GL ++PG S VE+ KV+ F
Sbjct: 471 HLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFR 530
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
D+SHP ++++ + + + +++ GY PD S VL++V+E++K L HS++LAI FA
Sbjct: 531 VGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFA 590
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L++ GS I+I +NLR+C DCHT TK IS I R IIVRD RFH F+DG CSC DYW
Sbjct: 591 LLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 81/177 (45%), Gaps = 7/177 (3%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L L F++ HA +++ GF N ++L+ A G +DY+ +F ++
Sbjct: 281 VSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKC--GQLDYSEKLFNEM 338
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D +N ++ G+ + A+ L++ M E V+ D+ +F ++ AC ++EG
Sbjct: 339 DHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGR 398
Query: 152 QI-HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+I H K + DL ++++ G+ + K M + W A++ +
Sbjct: 399 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGS 455
>gi|326532850|dbj|BAJ89270.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/484 (41%), Positives = 291/484 (60%), Gaps = 14/484 (2%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D + KA A+ +Q+H V ++G D+ + +L++ Y KC+++ A +F
Sbjct: 103 DALSLSFALKASARCSDGPATLQLHALVLRLGCTADVRLITTLLDSYAKCDELASARKVF 162
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRPEES----ILVSVLSACT 244
+M + VASW+A++A A S L LF + + + P E+ +++ LSAC
Sbjct: 163 DEMTVRDVASWNALLAGLAQGTEPSLALALFHRLVRSFQELPPREAPNVVTIIAALSACA 222
Query: 245 HLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLT 301
+G+L G C H R I NV V +LIDMY KCG L + L +F + D+ ++
Sbjct: 223 QIGSLQDGLCVH-EFARKIGVGGNVRVCNALIDMYSKCGSLARALEVFHSIKREDRTLVS 281
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
Y+ I ++MHG G +AL +F EM +EPD+V Y+ VL C+HAGLV+EGL F M
Sbjct: 282 YNTAIQAISMHGHGGDALKLFDEM-PTCIEPDEVTYIAVLCGCNHAGLVDEGLRVFHGM- 339
Query: 362 LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIG 421
R+ P V+HYG VVDL+GRAG L EA + I+SMP + V+W++LL ASK H ++E+
Sbjct: 340 ---RVPPNVKHYGTVVDLLGRAGRLAEAYDTIKSMPFPADIVLWQTLLGASKTHGDVELA 396
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARK 481
E+AA L ++ S+ DYVLLSN+YA RW DV ++R M S + + PGFS E++
Sbjct: 397 EVAATKLTELGSNVDGDYVLLSNVYASKARWADVGRVRDTMRSNDVRKVPGFSYTEISGV 456
Query: 482 VYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKL 541
++KF++ D+ HP IY + ++ ++ GY P+ S VL D+ E+EK+ L HS+KL
Sbjct: 457 MHKFINGDKEHPRLQEIYRALGEIMSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKL 516
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
AIAF LI G +R+ +N+R+C DCH KLIS Y R II+RDR RFHRF+DG CSC
Sbjct: 517 AIAFGLIATPPGETLRVIKNIRICGDCHVVAKLISKAYGRAIIIRDRARFHRFEDGQCSC 576
Query: 602 RDYW 605
DYW
Sbjct: 577 SDYW 580
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/581 (36%), Positives = 317/581 (54%), Gaps = 16/581 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIF-RQIDE 93
++L +L + + HA +L G +P + + ALS + + R +
Sbjct: 14 SLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRSLPT 73
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV--EPDNFTFPALFKACAKLQALKEGM 151
P D N +RG +L L + PD + KA A+ +
Sbjct: 74 PATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAHTTV 133
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+H V ++G D+ + +L++ Y KC + A +F +M + VA+W++++A A
Sbjct: 134 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGT 193
Query: 212 LWSECLKLFGEMNNE-----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ L LF + N P E +V+VLSAC +G L G H +
Sbjct: 194 EPNLALALFHRLANSFQELPSREEPNEVTIVAVLSACAQIGLLKDGMYVHEFAKKFGLDR 253
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
NV V SLIDMY KCG L + L +F + D+ ++Y+ I +MHG G +AL +F E
Sbjct: 254 NVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDE 313
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M +EPD V Y+ VL C+H+GLV++GL F+ M R+ P ++HYG +VDL+GRAG
Sbjct: 314 MPTR-IEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAG 368
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA + + SMP + V+W++LL A+K+H +E+ E+AA L ++ S+ DYVLLSN
Sbjct: 369 RLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSN 428
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ HP W IY +
Sbjct: 429 VYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALED 488
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G +R+ +NLR+
Sbjct: 489 IVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRI 548
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH KLIS Y R I++RDR RFHRF+DG CSCRDYW
Sbjct: 549 CGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 589
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/548 (37%), Positives = 316/548 (57%), Gaps = 36/548 (6%)
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
EP +N ++ GF ++EA+ ++ M +G PD T + A L+ + G Q
Sbjct: 202 EPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQ 261
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM-------------------- 192
+HG+V K G D FV +++++MYGKC V+ S +F ++
Sbjct: 262 VHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGM 321
Query: 193 ------------DQK---SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
DQK +V +W++IIA+ + NG E L+LF +M P +
Sbjct: 322 VDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGV-EPNAVTIP 380
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S++ AC ++ AL GK H +R +V V ++LIDMY KCG ++ F M+
Sbjct: 381 SLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSAL 440
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ ++ G AMHG+ KE + +F ML+ G +PD V + VLSAC+ GL EG C+
Sbjct: 441 NLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCY 500
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+ M E+ I P ++HY C+V L+ R G L EA +I+ MP + + VW +LLS+ +VH+N
Sbjct: 501 NSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNN 560
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
L +GEIAA+ LF + +P +Y+LLSN+YA W + +IR M SKGL ++PG+S +E
Sbjct: 561 LSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIE 620
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V KV+ ++ D+SHP +I E + ++ Q+K GY P + VL+DV+E +K + L GH
Sbjct: 621 VGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGH 680
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLA+ L++ S G P+++ +NLR+C+DCH K+IS + REI VRD RFH FKDG
Sbjct: 681 SEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDG 740
Query: 598 TCSCRDYW 605
CSC D+W
Sbjct: 741 VCSCGDFW 748
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 40/373 (10%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA--TCALSHWGSMDYACSIFRQ 90
+CL+ + +L + ++ HA +L+ F + ++L++ ALS + + ++
Sbjct: 7 QCLS--SSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALS-LSTPQLSLTLSSH 63
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ P F F++LI F + F L ++ + + PD F P+ K+CA L+AL G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H GF D V +SL +MY KC+++ A +F +M + V WSA+IA ++
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 211 GLWSECLKLFGEMN------NEKCWR----------------------------PEESIL 236
GL E +LFGEM N W P+ S +
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
VL A L + +G HG +I+ + V ++++DMY KCGC+++ +F + +
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ + ++GL+ +G AL +F++ + +E + V + ++++CS G E L
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363
Query: 357 FDRMKLEYRIVPT 369
F M+ Y + P
Sbjct: 364 FRDMQ-AYGVEPN 375
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV---EFASAIFKQMDQKSVASWSA 202
+L + Q H + ++ D + SL++ Y + + + + + ++ S+S+
Sbjct: 15 SLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I A A + + L F ++ + P+ +L S + +C L ALD G+ H +
Sbjct: 75 LIHAFARSHHFPHVLTTFSHLHPLRLI-PDAFLLPSAIKSCASLRALDPGQQLHAFAAAS 133
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ IV +SL MY+KC + LF M D+ + +S MI+G + G +EA +F
Sbjct: 134 GFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELF 193
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
EM G+EP+ V + G+L+ + G +E + F RM L P CV+ +G
Sbjct: 194 GEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMF-RMMLVQGFWPDGSTVSCVLPAVG 251
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 137/332 (41%), Gaps = 73/332 (21%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+VH +V+K G + F S ++ G + +F +++E N + G +
Sbjct: 261 QVHGYVIKQGLGSDKFVVSAMLDM--YGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSR 318
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALF------------------------------ 138
+ AL ++N+ ++ +E + T+ ++
Sbjct: 319 NGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVT 378
Query: 139 -----KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
AC + AL G +IH + G D++V ++LI+MY KC +++ A F +M
Sbjct: 379 IPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMS 438
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG- 252
++ SW+A++ +A +G E +++F M + +P+ VLSAC G + G
Sbjct: 439 ALNLVSWNAVMKGYAMHGKAKETMEMF-HMMLQSGQKPDLVTFTCVLSACAQNGLTEEGW 497
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
+C N + E I+ ++ Y+ +++ L+
Sbjct: 498 RC-----------YNSMSEEHGIEPKME--------------------HYACLVTLLSRV 526
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
G+ +EA SI EM EPD V+ +LS+C
Sbjct: 527 GKLEEAYSIIKEM---PFEPDACVWGALLSSC 555
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++ C N+ K++H L+ G F + + S L+ A G + A F ++
Sbjct: 381 SLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYA--KCGRIQLARRCFDKMS 438
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N +++G+ + +E + +++ M + G +PD TF + ACA+ +EG +
Sbjct: 439 ALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWR 498
Query: 153 IHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
+ + + G E + L+ + + K+E A +I K+M + W A++++
Sbjct: 499 CYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSS 554
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 314/556 (56%), Gaps = 35/556 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV----------- 127
G +D AC +F + E +I G+ + EA L++EM R V
Sbjct: 236 GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYV 295
Query: 128 ----------------EPDNFTFPALFKACAKLQALKEGMQIHGHV-FKVGFECDLFVQN 170
E + ++ A+ K L E ++ + K C N
Sbjct: 296 QNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC-----N 350
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
++I +G+ +V A +F QM +K +WSA+I + GL + L+LF M E R
Sbjct: 351 AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGI-R 409
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P L+SVLS C L LD G+ H L+R+ L+V V + L+ MY+KCG L K +
Sbjct: 410 PNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQV 469
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F A K + ++ +I+G A HG G EAL +F +M G+ PDDV +VGVLSACS+ G V
Sbjct: 470 FDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNV 529
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+GL F+ M+ +Y++ ++HY C+VDL+GRAG L EA++LI+ MP++ + ++W +LL
Sbjct: 530 KKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLG 589
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A + H L++ E+AAK L + + ++LLSN+YA RW DVA++R M + +++
Sbjct: 590 ACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKY 649
Query: 471 PGFSLVEVARKVYKFVSQDRS-HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PG S + V +KV+KF D S HP I ++ + L+ GY PD S VL DVDE+E
Sbjct: 650 PGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEE 709
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K + L+ HS+KLA+A+ L+ + G PIR+ +NLR+C DCH KLI+ + REII+RD
Sbjct: 710 KVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDAN 769
Query: 590 RFHRFKDGTCSCRDYW 605
RFH FKDG+CSCRDYW
Sbjct: 770 RFHHFKDGSCSCRDYW 785
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 23/275 (8%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +F ++ E + ++RG+VKE EA L+ +M E+ V L
Sbjct: 174 GMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLL 233
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ +A + +F + E D+ + ++I Y + ++ A +F +M +++V
Sbjct: 234 QEGRIDEACR--------LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285
Query: 199 SWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+ +I + N KLF M NE W ++L T+ G LD
Sbjct: 286 SWTTMITGYVQNQQVDIARKLFEVMPEKNEVSW-------TAMLKGYTNCGRLD----EA 334
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
L + +V+ ++I + + G + K +F M +K + T+S MI G
Sbjct: 335 SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL 394
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+AL +F M REG+ P+ + VLS C AGL N
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVC--AGLAN 427
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 162 FECDLFV--QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
F C F+ +NSLI Y + ++E A +F +M K++ SW++I+A + N E +
Sbjct: 92 FYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNM 151
Query: 220 FGEMN--NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F +M+ N W ++S + G ++ + + + NV+ T+++
Sbjct: 152 FDKMSERNTISWN-------GLVSGYINNGMINEAR----EVFDRMPERNVVSWTAMVRG 200
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
YVK G + + LF M +K ++++VM+ GL G+ EA +F M E D V
Sbjct: 201 YVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM----PEKDVVTR 256
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV----VDLMGRAGMLGEALELI 393
++ G + E + FD M + T G V VD+ A +L
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDI---------ARKLF 307
Query: 394 QSMPIQQNDVVWRSLLSA 411
+ MP ++N+V W ++L
Sbjct: 308 EVMP-EKNEVSWTAMLKG 324
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C NL+ +++HA +++ F + + AS L++ G++ A +F +
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYI--KCGNLAKAKQVFDRF 473
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N++I G+ + EAL ++++M G+ PD+ TF + AC+ +K+G+
Sbjct: 474 AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGL 533
Query: 152 QIHGHV-FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA-SWSAIIAA 206
+I + K E + ++++ G+ K+ A + ++M ++ A W A++ A
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/550 (38%), Positives = 311/550 (56%), Gaps = 24/550 (4%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL- 137
G +YA +F +I +P +N ++ + +A ++ M + V N AL
Sbjct: 87 GHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALA 146
Query: 138 -----------FKACAKLQALKEGMQIHGHV----FKVGFEC-------DLFVQNSLINM 175
F A + + + G+V EC + ++I
Sbjct: 147 QVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITG 206
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
Y K +VE A +F++M +++ +W+A+IA + NG + L+LF M E +P
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTML-ETGVKPNALS 265
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
L SVL C++L AL LGK H + + + + TSL+ MY KCG L+ LF +
Sbjct: 266 LTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
K + ++ MISG A HG GK+AL +F EM +EGL+PD + +V VL AC+HAGLV+ G+
Sbjct: 326 RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+ M+ ++ I +HY C+VDL+GRAG L EA++LI+SMP + + ++ +LL A ++H
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIH 445
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
NL + E AAKNL +++ + YV L+N+YA RW VA IR M + + PG+S
Sbjct: 446 KNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSW 505
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+E+ V+ F S DR HP +I+E + +E ++K GY PD+ VL DV E+ K + L
Sbjct: 506 IEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLL 565
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF L+ + G PIR+ +NLR+C DCH+ TK IS I REIIVRD RFH FK
Sbjct: 566 WHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFK 625
Query: 596 DGTCSCRDYW 605
DG CSCRDYW
Sbjct: 626 DGFCSCRDYW 635
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 17/269 (6%)
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+G ++ A +F+++ +N +I G+V+ E+ L L+ M E GV+P+ + ++
Sbjct: 210 FGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSV 269
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
C+ L AL+ G Q+H V K D SL++MY KC ++ A +F Q+ +K V
Sbjct: 270 LLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDV 329
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
W+A+I+ +A +G + L+LF EM E +P+ V+VL AC H G +DLG
Sbjct: 330 VCWNAMISGYAQHGAGKKALRLFDEMKKEGL-KPDWITFVAVLLACNHAGLVDLGVQYFN 388
Query: 258 SLIRNISALNVIVETS------LIDMYVKCGCLEKGLCLFRMMADKCQ-LTYSVMISGLA 310
++ R+ +ET ++D+ + G L + + L + M K Y ++
Sbjct: 389 TMRRDFG-----IETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACR 443
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVG 339
+H + L++ + LE D + G
Sbjct: 444 IH----KNLNLAEFAAKNLLELDPTIATG 468
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH-GQGKEALSIFSEM 325
NVI LI YV+CG ++ + +F M K +T++ +++ A G + A +F ++
Sbjct: 40 NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
+P+ V Y +L+ H V++ FD M L+ V + ++ + + G+
Sbjct: 100 ----PQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLK-----DVASWNTMISALAQVGL 150
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA 411
+GEA L +MP ++N V W +++S
Sbjct: 151 MGEARRLFSAMP-EKNCVSWSAMVSG 175
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C NL K+VH V K + ++LV+ S G + A +F QI
Sbjct: 268 SVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSM--YSKCGDLKDAWELFIQIP 325
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N +I G+ + ++AL L++EM + G++PD TF A+ AC + G+Q
Sbjct: 326 RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ 385
Query: 153 IHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ + G E ++++ G+ K+ A + K M K
Sbjct: 386 YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 333/576 (57%), Gaps = 13/576 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
T+LK C K L + + VH H+++ F + + N+ A C GS++ A +F
Sbjct: 56 TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKC-----GSLEEARKVFD 110
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ E + TLI G+ + +AL L+N+M G P+ FT ++ KA A +
Sbjct: 111 KMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCC 170
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+HG K GF+ ++ V ++L+++Y + ++ A +F ++ ++ SW+A+IA HA
Sbjct: 171 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 230
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L+LF M E +RP S+ AC+ G L+ GK H +I++ L
Sbjct: 231 RCGTEKALELFQGMLREG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+DMY K G + +F +A + ++++ +++ A HG G EA+ F EM R G
Sbjct: 290 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGG 349
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+++ ++ VL+ACSH+GL++EG ++ MK + IV HY +VDL+GRAG L A
Sbjct: 350 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRA 408
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L I+ MPI+ +W++LL+A ++H N E+G AA+++F+++ P +V+L N+YA
Sbjct: 409 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 468
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW D A++R +M G+ + P S VE+ ++ FV+ D HP + I ++ ++
Sbjct: 469 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 528
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY PD S V+ VD+ E+ L+ HS+K+A+AFAL++ GS I I +N+R+C DCH
Sbjct: 529 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 588
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ KL S REIIVRD RFH FKDG CSC+DYW
Sbjct: 589 SAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
E F N++ + D + L K C + L +G +HGH+ + F DL + N+L
Sbjct: 33 ESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTL 92
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
+NMY KC +E A +F +M ++ +W+ +I+ ++ + + L LF +M + P
Sbjct: 93 LNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFG-FSPN 151
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
E L SV+ A G HG ++ NV V ++L+D+Y + G ++ +F
Sbjct: 152 EFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFD 211
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+ + ++++ +I+G A ++AL +F MLREG P Y + ACS G + +
Sbjct: 212 ALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQ 271
Query: 353 GLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G M K ++V + ++D+ ++G + +A ++ + +++ V W SLL+A
Sbjct: 272 GKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTA 328
Query: 412 SKVH 415
H
Sbjct: 329 YAQH 332
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/540 (37%), Positives = 309/540 (57%), Gaps = 34/540 (6%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +I GF + + +A+ ++ M G++PD + ++ A L G+QIH +V
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK----------------------- 195
K G D FV ++LI+MYGKC S +F +MD+
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297
Query: 196 ----------SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+V SW+++IA+ + NG E L+LF EM E +P + +L AC +
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGV-KPNSVTIPCLLPACGN 356
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+ AL GK H +RN +V V ++LIDMY KCG + F MM ++ ++++ +
Sbjct: 357 IAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSL 416
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
++G AMHG+ EA++IF M R G +PD V + VLSAC+ GL EG FD M +
Sbjct: 417 MAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHG 476
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAA 425
+ ++HY C+V L+GR+G L EA +I+ MP + + VW +LLS+ +VH+ +++GEIAA
Sbjct: 477 VEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAA 536
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
K +F++ +P +Y+LLSN+YA W +V +R M S+GL ++PG+S +E+ KV+
Sbjct: 537 KRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHML 596
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
++ D SHP I E + ++ ++K GY P VL+DV+E +K + L GHS+KLA+
Sbjct: 597 LAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAVVL 656
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L++ G P+++ +NLR+C DCH K IS +REI VRD RFH+FK G CSC DYW
Sbjct: 657 GLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGDYW 716
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 162/398 (40%), Gaps = 77/398 (19%)
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I+ F K F + +++ M +G+ PD+ P + K CA L AL+ G Q+H G
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF-- 220
D V +SL++MY + + ++ A +F ++ Q V + SA+I+ A G E +LF
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 221 ----GEMNNEKCW----------------------------RPEESILVSVLSACTHLGA 248
G N W +P+ + + SVL A L
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM-------------- 294
+G H +I+ + V ++LIDMY KC C + +F M
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 295 -------------------ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
D ++++ MI+ + +G+ EAL +F EM EG++P+ V
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 336 VYVGVLSACSH--AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+L AC + A L + CF L I V ++D+ + G + +
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCF---SLRNGIFNDVYVGSALIDMYAKCGRMLASRLCF 402
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
MP +N V W SL++ +H A N+F++
Sbjct: 403 DMMP-NRNLVSWNSLMAGYAMHGK----TFEAINIFEL 435
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 314/556 (56%), Gaps = 35/556 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV----------- 127
G +D AC +F + E +I G+ + EA L++EM R V
Sbjct: 236 GRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYV 295
Query: 128 ----------------EPDNFTFPALFKACAKLQALKEGMQIHGHV-FKVGFECDLFVQN 170
E + ++ A+ K L E ++ + K C N
Sbjct: 296 QNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC-----N 350
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
++I +G+ +V A +F QM +K +WSA+I + GL + L+LF M E R
Sbjct: 351 AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGI-R 409
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P L+SVLS C L LD G+ H L+R+ L+V V + L+ MY+KCG L K +
Sbjct: 410 PNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQV 469
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F A K + ++ +I+G A HG G EAL +F +M G+ PDDV +VGVLSACS+ G V
Sbjct: 470 FDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNV 529
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+GL F+ M+ +Y++ ++HY C+VDL+GRAG L EA++LI+ MP++ + ++W +LL
Sbjct: 530 KKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLG 589
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A + H L++ E+AAK L + + ++LLSN+YA RW DVA++R M + +++
Sbjct: 590 ACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKY 649
Query: 471 PGFSLVEVARKVYKFVSQDRS-HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PG S + V +KV+KF D S HP I ++ + L+ GY PD S VL DVDE+E
Sbjct: 650 PGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEE 709
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K + L+ HS+KLA+A+ L+ + G PIR+ +NLR+C DCH KLI+ + REII+RD
Sbjct: 710 KVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDAN 769
Query: 590 RFHRFKDGTCSCRDYW 605
RFH FKDG+CSCRDYW
Sbjct: 770 RFHHFKDGSCSCRDYW 785
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 23/275 (8%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +F ++ E + ++RG+VKE EA L+ +M E+ V L
Sbjct: 174 GMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLL 233
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ +A + +F + E D+ + ++I Y + ++ A +F +M +++V
Sbjct: 234 QEGRIDEACR--------LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVV 285
Query: 199 SWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+ +I + N KLF M NE W ++L T+ G LD
Sbjct: 286 SWTTMITGYVQNQQVDIARKLFEVMPEKNEVSW-------TAMLKGYTNCGRLD----EA 334
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
L + +V+ ++I + + G + K +F M +K + T+S MI G
Sbjct: 335 SELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLEL 394
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+AL +F M REG+ P+ + VLS C AGL N
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVC--AGLAN 427
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 162 FECDLFV--QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
F C F+ +NSLI Y + ++E A +F +M K++ SW++I+A + N E +
Sbjct: 92 FYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNM 151
Query: 220 FGEMN--NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F +M+ N W ++S + G ++ + + + NV+ T+++
Sbjct: 152 FDKMSERNTISWN-------GLVSGYINNGMINEAR----EVFDRMPERNVVSWTAMVRG 200
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
YVK G + + LF M +K ++++VM+ GL G+ EA +F M E D V
Sbjct: 201 YVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM----PEKDVVTR 256
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV----VDLMGRAGMLGEALELI 393
++ G + E + FD M + T G V VD+ A +L
Sbjct: 257 TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDI---------ARKLF 307
Query: 394 QSMPIQQNDVVWRSLLSA 411
+ MP ++N+V W ++L
Sbjct: 308 EVMP-EKNEVSWTAMLKG 324
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C NL+ +++HA +++ F + + AS L++ G++ A +F +
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYI--KCGNLAKAKQVFDRF 473
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N++I G+ + EAL ++++M G+ PD+ TF + AC+ +K+G+
Sbjct: 474 AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGL 533
Query: 152 QIHGHV-FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA-SWSAIIAA 206
+I + K E + ++++ G+ K+ A + ++M ++ A W A++ A
Sbjct: 534 EIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGA 590
>gi|293334801|ref|NP_001169361.1| uncharacterized protein LOC100383228 [Zea mays]
gi|224028917|gb|ACN33534.1| unknown [Zea mays]
Length = 596
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/584 (37%), Positives = 318/584 (54%), Gaps = 21/584 (3%)
Query: 37 ILKTCKNLEEFKKVHA--HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+L L +K+ HA H L + A L L H ++ +A + R + P
Sbjct: 19 LLPHLSTLSHYKQFHARLHALGTLHSYPSLRARFLDRLALLPHADALPHALLLLRSLPSP 78
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-----DNFTFPALFKACAKLQALKE 149
DFN +RG +L L P D + KA A+
Sbjct: 79 ATNDFNAALRGLAASPHPARSLLLLAGRLLPAPAPPRPRLDALSLSFALKATARCSDAFA 138
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA- 208
+Q+H +F++G D+ + +L++ Y KC V A +F +M + VA+W+A++A A
Sbjct: 139 TLQLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVFDEMPVRDVATWNALLAGLAQ 198
Query: 209 ---SNGLWSECLKLFGEMNN-EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
N +L G P +V+ LSAC LG L G H R I
Sbjct: 199 GTEPNLALLLFRRLAGSFRELPPREEPNAVTVVAALSACAQLGTLKDGLAVH-EFARTIG 257
Query: 265 AL-NVIVETSLIDMYVKCGCLEKGLCLFR--MMADKCQLTYSVMISGLAMHGQGKEALSI 321
A+ NV V +LIDMY KCG L + L +F + D+ ++Y+ I L++HG G++AL +
Sbjct: 258 AVDNVCVGNALIDMYSKCGSLSRALEVFHSIKLEDRTLVSYNATIQALSIHGHGEDALKL 317
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM +EPD++ Y+ V+ C+HAGLV++G FD M R+ P ++HYG +VDL+G
Sbjct: 318 FDEMPAR-IEPDEITYLAVMGGCNHAGLVDDGRRVFDSM----RVPPNMKHYGTIVDLLG 372
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L EA ++I SMP + V+W++LL A+K+H N+++ E+AA L + S+ DYVL
Sbjct: 373 RAGRLAEAYDMIMSMPFPADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVL 432
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ H W IY
Sbjct: 433 LSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHMRWREIYRA 492
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G IR+ +N
Sbjct: 493 LDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKN 552
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR C DCH KLIS Y R II+RDR RFHRF+DG CSCRDYW
Sbjct: 553 LRTCGDCHVVAKLISKAYNRVIIIRDRARFHRFEDGHCSCRDYW 596
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 295/485 (60%), Gaps = 6/485 (1%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M G++P++FT+ + A Q ++H K + V +L++ Y K
Sbjct: 1 MSREGIKPNDFTYSTILTA----QPGVSPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGN 56
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
V+ AS +F+++++K + +WSA+I +A G +++F +M EK +P E +++
Sbjct: 57 VDEASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKI-KPNEYTFSGIIN 115
Query: 242 ACTHLGA-LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
AC A ++ GK H I++ + V ++L+ MY K G +E +F+ ++ +
Sbjct: 116 ACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLV 175
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+++ +ISG A HG G++AL +F EM R+ LE D V ++GV+SAC+H GL NEG FD M
Sbjct: 176 SWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIM 235
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
++ I P ++HY C+VDL GRAGML +A+E+I MP + VWR+LL+AS +H NLE+
Sbjct: 236 VKDHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEV 295
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
G++AA L + +P+ YVLL+NMYA W + AK+R M K + + G+S +EV
Sbjct: 296 GKLAADKLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKN 355
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
K Y F++ D SHP + IY + ++ QLK GY PD S V +DVDE+ K L HS++
Sbjct: 356 KTYTFLAGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSER 415
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF LI G+P++I +NLR+C DCH+ KLIS++ R+I+VRD RFH FK G CS
Sbjct: 416 LAIAFGLIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCS 475
Query: 601 CRDYW 605
C DYW
Sbjct: 476 CGDYW 480
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 136/261 (52%), Gaps = 6/261 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
TIL + F+ +HA +K + +P + L+ A G++D A +F++I+E
Sbjct: 15 TILTAQPGVSPFE-MHAQAIKRNYVKSPSVGTALLD--AYVKRGNVDEASKVFQRIEEKD 71
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA-LKEGMQIH 154
++ +I G+ + + E A+ ++ +M + ++P+ +TF + ACA A +++G Q+H
Sbjct: 72 IVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLH 131
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
K F L V ++L+ MY K +E A +FK+ ++ + SW++II+ +A +G
Sbjct: 132 AWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSIISGYAQHGYGR 191
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS- 273
+ L++F EM + + + V+SACTH G + G+ ++++ + S
Sbjct: 192 KALEVFEEMQRQNL-EMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSC 250
Query: 274 LIDMYVKCGCLEKGLCLFRMM 294
++D+Y + G L K + + M
Sbjct: 251 MVDLYGRAGMLVKAMEIINEM 271
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/641 (34%), Positives = 341/641 (53%), Gaps = 69/641 (10%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E + ++ + + +++H + + F + + +++C S S+DYA SIF++
Sbjct: 42 ETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSC--SSLNSVDYAISIFQR 99
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP--------------------- 129
+ ++ FN LIRG + FE ++ + M + + P
Sbjct: 100 FELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVG 159
Query: 130 --------------DNFTFPALFKACAKLQALKEGMQ--------------------IHG 155
D+F +L K++ L ++ IHG
Sbjct: 160 RALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHG 219
Query: 156 H-----------VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ +F + D NSLIN + K + A +F +M +K+V SW+ ++
Sbjct: 220 YCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMV 279
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ NG + L+ F M E RP + +VS LSAC +GALD G H L N
Sbjct: 280 NGFSQNGDPEKALETFFCMLEEGA-RPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGF 338
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
LN+++ T+L+DMY KCG +E +F +K L +SVMI G A+HG ++AL F
Sbjct: 339 KLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEW 398
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M G +PD VV++ VL+ACSH+G VNEGL FD M+ Y I P+++HY VVD++GRAG
Sbjct: 399 MKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAG 458
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EAL+ I++MPI + VVW +L A + H N+E+ E+A+K L Q+ HP YV LSN
Sbjct: 459 RLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSN 518
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
YA RW D ++R M G ++ PG+S +EV K+++FV+ D +H IY + +
Sbjct: 519 AYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDE 578
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ + +GY+ +I VL +++E+EK E L HS+KLA+AF ++ G+ +RI +NLR+
Sbjct: 579 ISASAREKGYTKEIECVLHNIEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRV 638
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH++ K S + +REII+RD KRFH F DG CSC DYW
Sbjct: 639 CVDCHSFMKYASKMSKREIILRDMKRFHHFNDGVCSCGDYW 679
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/527 (37%), Positives = 315/527 (59%), Gaps = 10/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ F + ++ GFV+ +EA ++ EM E+ + ++ A+
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMI 315
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ Q +++ ++ F + N+++ Y +C ++ A +F +M Q+
Sbjct: 316 AGYVQSQQIEKAREL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+I+ +A +G E L LF +M + S L LS+C + AL+LGK HG
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALACALSSCAEIAALELGKQLHGR 430
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ I +L+ MY KCG +E+ +F + +K ++++ MI+G A HG GKEA
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L++F E ++ ++PDDV VGVLSACSH GLV++G+ F+ M Y I +HY C++D
Sbjct: 491 LALF-ESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EAL L++SMP + W +LL AS++H + E+GE AA+ +F++ +
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW +V ++R++M KG+ + PG+S VE+ K + F D SHP + I
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + +++ +LK +G+ VL DV+E+EK LK HS+KLA+AF ++ + G PIR+
Sbjct: 670 YAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRV 729
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I +R+IIVRD RFH F +G+CSC DYW
Sbjct: 730 IKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 165/377 (43%), Gaps = 68/377 (18%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A ++F Q+ E +N ++ GF + EEA ++++M + + ++ L
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLL 191
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A + +++ ++ F + ++ N L+ Y + ++++ A ++F +M +
Sbjct: 192 SAYVQNGRIEDARRL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKI 247
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL--VSVLSACTHLGALD------ 250
SW+ +I +A NGL SE +LF E+ P + +++S G LD
Sbjct: 248 SWNIMITGYAQNGLLSEARRLFEEL-------PIRDVFAWTAMVSGFVQNGMLDEATRIF 300
Query: 251 -----LGKCTHGSLI---------------------RNISALNVIVETSLIDMYVKCGCL 284
+ + ++I RN S+ N +V Y +CG +
Sbjct: 301 EEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNI 355
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++ LF M + ++++ MISG A GQ +EAL +F +M R+G + LS+C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGEALELIQSMPIQ 399
+ + G +L R+V G ++ + G+ G + EA ++ + I
Sbjct: 416 AEIAALELG------KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED--IT 467
Query: 400 QNDVV-WRSLLSASKVH 415
+ D+V W ++++ H
Sbjct: 468 EKDIVSWNTMIAGYARH 484
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 55/339 (16%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N I ++++ + E AL ++N M R T+ A+ I G++
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRRST----VTYNAM---------------ISGYLS 103
Query: 159 KVGFEC-----------DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
F+C DL N +++ Y K + A A+F QM +K V SW+A+++
Sbjct: 104 NNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163
Query: 208 ASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG E K+F +M NE W +LSA G ++ + L +
Sbjct: 164 AQNGFVEEARKIFDQMLVKNEISWN-------GLLSAYVQNGRIEDAR----RLFDSKMD 212
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
++ L+ YV+ L+ LF M + ++++++MI+G A +G EA +F E+
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Query: 326 -LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+R D + ++S G+++E F+ M + + G V ++
Sbjct: 273 PIR-----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYV-----QSQ 322
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
+ +A EL MP +N W ++++ N++ +I
Sbjct: 323 QIEKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKI 360
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 326/587 (55%), Gaps = 10/587 (1%)
Query: 22 GPELNLRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHW 78
GP +L + +L L+E K ++ +K GF+ + + L++ S
Sbjct: 26 GPRFDL----TTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISL--FSKC 79
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +F +I + N +I GF E E+++ L+ E+ G + T L
Sbjct: 80 GEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLI 139
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ IHG K+G V +L +Y + ++ FA +F + +K++A
Sbjct: 140 PVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLA 199
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+I+ NGL + LF M P + S+LSAC +GAL LG+ H
Sbjct: 200 SWNAMISGCTQNGLTDAAISLFQTMQKNNV-NPNPVTVTSILSACAQIGALSLGEWVHSL 258
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ N NV V T+LIDMY KCG + LF +M +K ++T++ MISG +HG G+EA
Sbjct: 259 IKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEA 318
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F +ML ++P + ++ VL ACSHAGLV EG F M ++ P +HY C+VD
Sbjct: 319 LKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVD 378
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
++GRAG L +ALE I++MP++ VW +LL A +H + + +A++ LF+++ +
Sbjct: 379 ILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGY 438
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVL+SN+Y+ +++ A +R K L ++PG +L+E+ + + F S D+SHP I
Sbjct: 439 YVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAI 498
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++ G+ + + VL D++E+EK +K HS+KLAIAF LI G+ IRI
Sbjct: 499 YAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGLISTEPGAEIRI 558
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH +TK +S I +R I+VRD RFH FKDG CSC DYW
Sbjct: 559 IKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCSCGDYW 605
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 9/349 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+I GFVK FE+++ ++ +M G D T A+ A A+LQ LK GMQI K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
GF + + LI+++ KC +VE A +F ++ +K + S +A+I+ NG + ++LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
E+ + R S +V ++ + G L C HG ++ + V T+L +Y +
Sbjct: 121 KELLSSG-ERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
+ LF A+K +++ MISG +G A+S+F M + + P+ V +
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
LSAC+ G ++ G +K R V ++D+ + G + A EL MP ++
Sbjct: 240 LSACAQIGALSLGEWVHSLIK-SNRFESNVYVSTALIDMYAKCGSITVARELFDLMP-EK 297
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLSNMYA 447
N+V W +++S +H + G+ A K + + +S P+ LS +YA
Sbjct: 298 NEVTWNAMISGYGLHGH---GQEALKLFYDMLSSSVKPTGLTFLSVLYA 343
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/583 (34%), Positives = 325/583 (55%), Gaps = 13/583 (2%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMD 82
L L++L C L + VH + +K GF A+ ++ + C S W S +
Sbjct: 295 LDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNC--SDWRSTN 352
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
IFR + + + +I + + +++ L+ EM G PD F + A A
Sbjct: 353 ---KIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFA 409
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ LK G +HG+ + G E L V N+L+ MY KC +E A IF + K + SW+
Sbjct: 410 GNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNT 469
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I ++ N L +E LF EM + RP + +L A L +L+ G+ H +R
Sbjct: 470 LIGGYSRNNLANEAFSLFTEMLLQ--LRPNAVTMTCILPAAASLSSLERGREMHAYALRR 527
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V +LIDMYVKCG L LF +++K +++++M++G MHG+G++A+++F
Sbjct: 528 GYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALF 587
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
+M G+ PD + +L ACSH+GL +EG FD M+ E++I P ++HY C+VDL+
Sbjct: 588 EQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLIN 647
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
G L EA E I SMPI+ + +W SLL ++H N+++ E A+ +F++ + YVLL
Sbjct: 648 TGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLL 707
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
+N+YA A+RW V K++ ++ +GL ++ G S +E KV+ F++ +R+HP I E +
Sbjct: 708 ANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFL 767
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+++ +++ EG+ P L D E L GHS KLA+AF +++LS+G IR+ +N
Sbjct: 768 NEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNS 827
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C+ CH K IS + REII+RD RFH F+ G CSCR YW
Sbjct: 828 RVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCRGYW 870
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 178/377 (47%), Gaps = 14/377 (3%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
++E+ + VH + K GF + L+A A S+ A +F + +N++
Sbjct: 211 SIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSN--RTKDAILVFDGMPHRDVISWNSM 268
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
I G +++A+ L+ M+ G E D+ T ++ ACA+L L G +HG+ K GF
Sbjct: 269 ISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGF 328
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ N L++MY C + IF+ M QK+V SW+A+I ++ GL+ + LF E
Sbjct: 329 ISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQE 388
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E RP+ + S L A L GK HG IRN + V +L++MYVKCG
Sbjct: 389 MGLEGT-RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCG 447
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+E+ +F + K ++++ +I G + + EA S+F+EML + L P+ V +L
Sbjct: 448 NMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILP 506
Query: 343 ACSHAGLVNEG----LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
A + + G R LE V ++D+ + G L A L +
Sbjct: 507 AAASLSSLERGREMHAYALRRGYLEDDFVANA-----LIDMYVKCGALLLARRLFDRLS- 560
Query: 399 QQNDVVWRSLLSASKVH 415
+N + W +++ +H
Sbjct: 561 NKNLISWTIMVAGYGMH 577
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 14/282 (4%)
Query: 79 GSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
G ++ A +F ++ P D + L+ G+ K + E + L+ +M GV PD +T
Sbjct: 143 GDLENARRVFDEM--PQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTIS 200
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ K A L ++++G +HG + K+GF V N+L+ Y K + + A +F M +
Sbjct: 201 CVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR 260
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI----LVSVLSACTHLGALDL 251
V SW+++I+ SNGL+ + ++LF M W E + L+SVL AC L L L
Sbjct: 261 DVISWNSMISGCTSNGLYDKAIELFVRM-----WLEGEELDSATLLSVLPACAELHLLFL 315
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G+ HG ++ + L+DMY C +FR M K ++++ MI+
Sbjct: 316 GRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTR 375
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G + +F EM EG PD L A + L+ G
Sbjct: 376 AGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHG 417
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNIS----ALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+VL C+ + +L+ GK H L+R S ++ ++ L+ MY+KCG LE +F
Sbjct: 96 AVLQLCSEVRSLEGGKRAH-FLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDE 154
Query: 294 MADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M + ++ ++SG A G +E + +F +M G+ PD VL + G + +
Sbjct: 155 MPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIED 214
Query: 353 GLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + + KL + V + ++ ++ +A+ + MP ++ + W S++S
Sbjct: 215 GEVVHGLLEKLGFGSQCAVGN--ALMAFYAKSNRTKDAILVFDGMP-HRDVISWNSMISG 271
>gi|413952609|gb|AFW85258.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952610|gb|AFW85259.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
gi|413952611|gb|AFW85260.1| hypothetical protein ZEAMMB73_606432 [Zea mays]
Length = 630
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/584 (37%), Positives = 318/584 (54%), Gaps = 21/584 (3%)
Query: 37 ILKTCKNLEEFKKVHA--HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
+L L +K+ HA H L + A L L H ++ +A + R + P
Sbjct: 53 LLPHLSTLSHYKQFHARLHALGTLHSYPSLRARFLDRLALLPHADALPHALLLLRSLPSP 112
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-----DNFTFPALFKACAKLQALKE 149
DFN +RG +L L P D + KA A+
Sbjct: 113 ATNDFNAALRGLAASPHPARSLLLLAGRLLPAPAPPRPRLDALSLSFALKATARCSDAFA 172
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA- 208
+Q+H +F++G D+ + +L++ Y KC V A +F +M + VA+W+A++A A
Sbjct: 173 TLQLHATLFRLGVAADVRLMTTLLDSYAKCGDVASARKVFDEMPVRDVATWNALLAGLAQ 232
Query: 209 ---SNGLWSECLKLFGEMNN-EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
N +L G P +V+ LSAC LG L G H R I
Sbjct: 233 GTEPNLALLLFRRLAGSFRELPPREEPNAVTVVAALSACAQLGTLKDGLAVH-EFARTIG 291
Query: 265 AL-NVIVETSLIDMYVKCGCLEKGLCLFR--MMADKCQLTYSVMISGLAMHGQGKEALSI 321
A+ NV V +LIDMY KCG L + L +F + D+ ++Y+ I L++HG G++AL +
Sbjct: 292 AVDNVCVGNALIDMYSKCGSLSRALEVFHSIKLEDRTLVSYNATIQALSIHGHGEDALKL 351
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM +EPD++ Y+ V+ C+HAGLV++G FD M R+ P ++HYG +VDL+G
Sbjct: 352 FDEMPAR-IEPDEITYLAVMGGCNHAGLVDDGRRVFDSM----RVPPNMKHYGTIVDLLG 406
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L EA ++I SMP + V+W++LL A+K+H N+++ E+AA L + S+ DYVL
Sbjct: 407 RAGRLAEAYDMIMSMPFPADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVL 466
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ H W IY
Sbjct: 467 LSNVYASKSRWVDVGRVRDTMRSNDVKKVPGFSYTEIDGVMHKFINGDKEHMRWREIYRA 526
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G IR+ +N
Sbjct: 527 LDEIGSRICALGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLISTPPGETIRVIKN 586
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR C DCH KLIS Y R II+RDR RFHRF+DG CSCRDYW
Sbjct: 587 LRTCGDCHVVAKLISKAYNRVIIIRDRARFHRFEDGHCSCRDYW 630
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/531 (35%), Positives = 312/531 (58%), Gaps = 23/531 (4%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G +D A +F ++ E + ++I G+ ++ + A+ L +M + GV+ D
Sbjct: 159 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAIT 218
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
++ ACA+ +L G +H ++ +LFV N+L++MY KC +E A+++F M K
Sbjct: 219 SILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK 278
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ ++ GE+ +P+ + +L AC L AL+ GK
Sbjct: 279 DIISWNTMV----------------GEL------KPDSRTMACILPACASLSALERGKEI 316
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN + + V +L+D+YVKCG L LF M+ K ++++VMI+G MHG G
Sbjct: 317 HGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYG 376
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA++ F+EM G+EPD+V ++ +L ACSH+GL+ +G F MK ++ I P ++HY C
Sbjct: 377 NEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYAC 436
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+ R G L +A + I+++PI + +W +LL +++H++E+ E A+ +F++ +
Sbjct: 437 MVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPEN 496
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS-QDRSHPA 494
YVLL+N+YA A++W +V ++R ++ KGL ++PG S +E+ +V FVS + SHP
Sbjct: 497 TGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPH 556
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
I ++ +M ++K EGY P L + DE +K L GHS+KLA+AF L+ L
Sbjct: 557 SKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRK 616
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH K +S REI++RD RFH FKDG CSCR +W
Sbjct: 617 TIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 667
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 183/428 (42%), Gaps = 41/428 (9%)
Query: 35 LTILKTCKNLEEFKKV-----HAHVLKWGF----------FWNPFCASNLVATCALSHWG 79
++ TC +L+E ++V +V W F F C ++ +
Sbjct: 3 VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKR 62
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S + A +F ++ + +N++I G+V E L +Y +M G++ D T ++
Sbjct: 63 S-ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
CAK L G +H K FE + N+L++MY KC ++ A +F++M +++V S
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+++IA + +G + L +M E + + + S+L AC G+LD GK H +
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGV-KLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
N A N+ V +L+DMY KCG +E +F M K ++++ M+
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG------------ 288
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
L+PD +L AC+ + G + L +VDL
Sbjct: 289 ---------ELKPDSRTMACILPACASLSALERGKEIHGYI-LRNGYSSDRHVANALVDL 338
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+ G+LG A L +P D+V +++ A H IA N + P +
Sbjct: 339 YVKCGVLGLARLLFDMIP--SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 396
Query: 440 VLLSNMYA 447
+S +YA
Sbjct: 397 SFISILYA 404
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 327/573 (57%), Gaps = 8/573 (1%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I++ +++ ++VHAH++ G+ + + L+ + ++ Y +F + P
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSAR--AIAYTHLLFLSVPLPDD 72
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F FN++I+ K + Y M V P N+TF ++ K+CA L AL+ G +H H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
GF D +VQ +L+ Y KC +E A +F +M +KS+ +W+++++ NGL E
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEA 192
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+++F +M E + P+ + VS+LSAC GA+ LG H +I LNV + T+LI+
Sbjct: 193 IQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDV 335
+Y +CG + K +F M + ++ MIS HG G++A+ +F++M + G P++V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+V VLSAC+HAGLV EG + RM YR++P V+H+ C+VD++GRAG L EA + I
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 396 MPIQQN---DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ +W ++L A K+H N ++G AK L + +P +V+LSN+YA + +
Sbjct: 372 LDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKT 431
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+V+ IR M L + G+S++EV K Y F D SH IY + + + K
Sbjct: 432 DEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+P +V+ V+E+EK L+ HS+KLA+AF L+ + I I +NLR+C DCH+
Sbjct: 492 GYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSAF 550
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS++ R+I VRD+ RFH F++G+CSC DYW
Sbjct: 551 KYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 12/307 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++K+C +L K VH H + GF + + + LV S G M+ A +F ++
Sbjct: 112 SVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTF--YSKCGDMEGARQVFDRMP 169
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N+L+ GF + +EA+ ++ +M E G EPD+ TF +L ACA+ A+ G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H ++ G + ++ + +LIN+Y +C V A +F +M + +VA+W+A+I+A+ ++G
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVE 271
+ ++LF +M ++ P V+VLSAC H G ++ G+ + + ++ + V
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH 349
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLT----YSVMISGLAMHGQGKEALSIFSEMLR 327
++DM + G L++ + + T ++ M+ MH + I ++
Sbjct: 350 VCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI- 408
Query: 328 EGLEPDD 334
LEPD+
Sbjct: 409 -ALEPDN 414
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/581 (36%), Positives = 316/581 (54%), Gaps = 16/581 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIF-RQIDE 93
++L +L + + HA +L G +P + + ALS + + R +
Sbjct: 12 SLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRSLPT 71
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV--EPDNFTFPALFKACAKLQALKEGM 151
P D N +RG +L L + PD + KA A+ +
Sbjct: 72 PATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAHTTV 131
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+H V ++G D+ + +L++ Y KC + A +F +M + VA+W++++A A
Sbjct: 132 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGT 191
Query: 212 LWSECLKLFGEMNNE-----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ L LF + N P E +V+ LSAC +G L G H R
Sbjct: 192 EPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDR 251
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
NV V SLIDMY KCG L + L +F + D+ ++Y+ I +MHG G +AL +F E
Sbjct: 252 NVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDE 311
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M +EPD V Y+ VL C+H+GLV++GL F+ M R+ P ++HYG +VDL+GRAG
Sbjct: 312 MPTR-IEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAG 366
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA + + SMP + V+W++LL A+K+H +E+ E+AA L ++ S+ DYVLLSN
Sbjct: 367 RLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSN 426
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ HP W IY +
Sbjct: 427 VYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALED 486
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G +R+ +NLR+
Sbjct: 487 IVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRI 546
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH KLIS Y R I++RDR RFHRF+DG CSCRDYW
Sbjct: 547 CGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 323/574 (56%), Gaps = 13/574 (2%)
Query: 38 LKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDE 93
K+C +L ++H HV+K G PF ++L++ C S S A +F +
Sbjct: 63 FKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIAS---ARKVFDENHH 119
Query: 94 PG--AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
A +N LI G+ F +A+ L+ +M + GV + T L CA L G
Sbjct: 120 SRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGT 179
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H + G + DL V N L+ MY +C V+FA +F M +K + +W+A+I+ +A NG
Sbjct: 180 SLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNG 239
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L L L+ +M P+ LV VLS+C HLGA G+ + + N ++
Sbjct: 240 LAGHVLDLYRKMEFTGIV-PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK 298
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+LI+MY +CG L K +F M +K ++++ +I+G MHGQG+ A+ +F EM+
Sbjct: 299 NALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL 358
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD +V VLSACSHAGL +GL F M+ +Y + P +HY CVVDL+GRAG L EA +
Sbjct: 359 PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
LI SM ++ + VW +LL A K+H N+E+ E+A + + + + YVLLSN+++ A
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGN 478
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
+ ++R M + L + PG S VE +++ F++ DR+HP IY M+ +E +K
Sbjct: 479 MEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKR 538
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G S D Q R+ +E + HS+KLAIAF LI+ G+ I + +NLR+C DCH +
Sbjct: 539 RGGSNDNDQESRN---EELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLF 595
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KL+S I +R+++VRD RFH FK+G CSC+DYW
Sbjct: 596 LKLVSEIVDRQLVVRDATRFHHFKNGVCSCKDYW 629
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 173/333 (51%), Gaps = 14/333 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +R ++ F+EAL LY +M G P+ FTFP FK+CA L G Q+HGHV
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVI 83
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWSAIIAAHASNGLWSEC 216
K G E + FVQ SLI+MY KC + A +F + + ++A+IA ++ N +S+
Sbjct: 84 KTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDA 143
Query: 217 LKLFGEMNNEKCWRPEESI--LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ LF +M E ++ L+ V + HLG G H +R ++ V L
Sbjct: 144 VLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLG---FGTSLHACSVRFGLDGDLSVGNCL 200
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+ MYV+CG ++ LF M +K +T++ MISG A +G L ++ +M G+ PD
Sbjct: 201 LTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDP 260
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V VGVLS+C+H G G R++L + P +++ ++++ R G L +A +
Sbjct: 261 VTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKN--ALINMYARCGNLVKARAIF 318
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
M ++N + W ++++ +H GE+A +
Sbjct: 319 DGM-TEKNVISWTAIIAGYGMHGQ---GELAVQ 347
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 317/557 (56%), Gaps = 41/557 (7%)
Query: 50 VHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+HA L+ GF + F + LV A + G + A + F + F N ++ +V
Sbjct: 69 LHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVA 128
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
E EA +++ M R DL
Sbjct: 129 RGEVAEARKVFDGMSGR---------------------------------------DLVS 149
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N++I+ Y V A IF + SWS++I+A+A E L+L+ EM
Sbjct: 150 WNTMIHGYAVRGDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGV 209
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
P+ +VSVLSAC+ +GAL +G H + N +++ + T+L+DMY KCG +E L
Sbjct: 210 -APDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSL 268
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M K LT+S MI GLA HG G +ALS+FSEM+ +GL+P+++ ++GVL AC+H G
Sbjct: 269 KVFHAMPVKDVLTWSSMIIGLANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVG 328
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LVN+G F M + +VP ++HYGC+VDL+GRAG + EA+ELI+SM + + ++WR+L
Sbjct: 329 LVNDGKKYFSSMSDVHGVVPRMEHYGCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTL 388
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A ++H N+EI E A L ++ YVLLSN+YA+A W VA++R + + +
Sbjct: 389 LGACRIHKNVEIAEEAMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQ 448
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S +E V++FVS DRSHP + IY+M+ +M +L+ GY P S VL+D+DE
Sbjct: 449 RVPGRSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEMMDRLRQAGYRPMTSLVLQDIDEQ 508
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
K+ L HS+KLAIAF L+ S +RI +NLR C DCH+ KLIS+ Y+R++IVRDR
Sbjct: 509 SKKRALAEHSEKLAIAFGLLVTPARSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDR 568
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F +G CSC+DYW
Sbjct: 569 NRFHHFSEGQCSCKDYW 585
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/611 (35%), Positives = 336/611 (54%), Gaps = 33/611 (5%)
Query: 25 LNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLVATCALSHWGS 80
L +R + L C LE ++VHA VLK N F AS LV A +
Sbjct: 254 LGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNE--Q 311
Query: 81 MDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEF-EEALFLYNEM-FERGVEPDNFTFPA 136
+ +A +F + E G +N +I G+ + EEA+ L++ M E G P T
Sbjct: 312 VSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAG 371
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ ACA+ + +HG+V K + FVQN+L++MY + +++ A IF +D +
Sbjct: 372 VLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRD 431
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEM--------------------NNEKCWRPEESIL 236
+ SW+ +I GL SE +L EM + ++C P L
Sbjct: 432 IVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCM-PNNITL 490
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+++L C L A GK HG +R+ ++ V ++L+DMY KCGCL +F +
Sbjct: 491 MTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPR 550
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLL 355
+ +T++V+I MHG G EAL++F M+ G P++V ++ L+ACSH+GLV+ GL
Sbjct: 551 RNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLE 610
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM-PIQQNDVVWRSLLSASKV 414
F MK +Y PT + CVVD++GRAG L EA +I SM P + W ++L A ++
Sbjct: 611 LFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRL 670
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
H N+++G IAA+ LF++ S YVLL N+Y+ A W + ++R M +G+ + PG S
Sbjct: 671 HRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCS 730
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
+E+ +++F++ + +HP ++ + + +++ EGY PD S VL DVDE EK L
Sbjct: 731 WIELDGAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAML 790
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
+ HS+KLAIAF L+ G+ IR+A+NLR+CNDCH K IS + REI++RD +RFH F
Sbjct: 791 RYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHF 850
Query: 595 KDGTCSCRDYW 605
+DGTCSC DYW
Sbjct: 851 RDGTCSCGDYW 861
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 189/418 (45%), Gaps = 44/418 (10%)
Query: 35 LTILKTCKNLEE-----FKKVHAHVLKWGFFWN-----PFCASNLVATCALSHWGSMDYA 84
+++L C +L + ++ HA LK GF PF A L++ A G +D A
Sbjct: 156 VSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNA--LLSMYA--RLGLVDDA 211
Query: 85 CSIFRQIDEPGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
+F G D NT+I V+ EEA+ + +M GV PD TF + AC
Sbjct: 212 QRLFFS-SGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270
Query: 142 AKLQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVA 198
++L+ L G ++H V K + FV ++L++MY E+V A +F + + + +
Sbjct: 271 SRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLG 330
Query: 199 SWSAIIAAHASN-GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
W+A+I +A + G+ E ++LF M E P E+ + VL AC + HG
Sbjct: 331 MWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHG 390
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+++ A N V+ +L+DMY + G +++ +F M+ + ++++ +I+G + G E
Sbjct: 391 YVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISE 450
Query: 318 ALSIFSEM-----------LREGLE---------PDDVVYVGVLSACSHAGLVNEGLLCF 357
A + EM + EG + P+++ + +L C+ G
Sbjct: 451 AFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIH 510
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + + + +VD+ + G L A + +P ++N + W L+ A +H
Sbjct: 511 G-YAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP-RRNVITWNVLIMAYGMH 566
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKCEKVEFASA 187
D+F P K+ A L+ + IHG + V N+L+ Y +C ++ A A
Sbjct: 47 DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106
Query: 188 IFKQM--DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F D + S++++I+A W L +M + LVSVL AC+H
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH--EVSSFTLVSVLLACSH 164
Query: 246 LG--ALDLGKCTHGSLIRNISALNVIVE----TSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L LG+ H +++ L+ E +L+ MY + G ++ LF
Sbjct: 165 LADQGHRLGREAHAFALKH-GFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVG 223
Query: 300 --LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+T++ MIS L G+ +EA+ + +M+ G+ PD V + L ACS L+ G
Sbjct: 224 DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVG 279
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 328/572 (57%), Gaps = 5/572 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L T LEE ++H + + G + LV S D A ++F Q++ P
Sbjct: 369 LNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCE--SPDDARTVFDQLELP 426
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N++I +V+ ++AL L+ M ++G++PD F + AC + +H
Sbjct: 427 NLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVH 486
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V + G VQ SL+NMY K +++ A I ++MD++ + +W+ +I +A +G
Sbjct: 487 QCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSR 546
Query: 215 ECLKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+ + ++ E P + + +SVL+ACT +L GK H + + +VIV+ +
Sbjct: 547 EALEAYQKLQLEAI--PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 604
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L +MY KCG +E +F M + ++++ M+ A HG+ +E L + +M +EG++ +
Sbjct: 605 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLN 664
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ +V VLS+CSHAGL+ EG F + + I +HYGC+VDL+GRAG L EA + I
Sbjct: 665 GITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 724
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MP++ V W SLL A +V +L+ G++AA L +++ + S V+LSN+Y+ W
Sbjct: 725 SKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWK 784
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ AK+R MAS+ + + PG S ++V KV++F +D SHP IY+ + ++ + ++ G
Sbjct: 785 NAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAG 844
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y PD VL DVDE++K L HS+KLAIAF LI + S + I +NLR+C DCHT TK
Sbjct: 845 YVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATK 904
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I REI+VRD RFH F+DG+CSC+DYW
Sbjct: 905 FISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 143/279 (51%), Gaps = 2/279 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S GS+ A + F +I +N +I + F+EAL L++ M GV P+ T
Sbjct: 3 SRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLV 62
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
A+ +C + L++G+ +H + GF + V +L+NMYGKC + A ++F++M +K
Sbjct: 63 AVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEK 122
Query: 196 SVASWSAIIAAHASNG-LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+V +W+A++ ++ G W ++LF M E + ++VL++ AL GK
Sbjct: 123 NVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGV-KANVITFLNVLNSVVDPDALRKGKF 181
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H + + +L+V V T+L++ Y KCG L +F M + T++ MIS ++ +
Sbjct: 182 IHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISER 241
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
EA IF M +EG D V ++ +L AC + + G
Sbjct: 242 SGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHG 280
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 21/385 (5%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIF 88
+ +L +C + E + VHA L+ GFF N LVAT L+ + G++ A S+F
Sbjct: 62 VAVLNSCGSFRELRDGILVHALSLERGFFQN-----TLVATALLNMYGKCGTLLDAQSVF 116
Query: 89 RQIDEPGAFDFNTLIRGF-VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
++ E +N ++ + ++ ++ A+ L+ M GV+ + TF + + AL
Sbjct: 117 EEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDAL 176
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
++G IH V + D+FV +L+N Y KC + A +F M +SV +W+++I+A+
Sbjct: 177 RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 236
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ + E +F M E R + +S+L AC + L GK S+ L+
Sbjct: 237 SISERSGEAFFIFQRMQQEG-ERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELD 295
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ V T+LI MY +C E +F M +T+S +I+ A HG EAL F M +
Sbjct: 296 LFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQ 355
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL---EYRIVPTVQHYGCVVDLMGRAG 384
EG+ P+ V ++ +L+ + GL R+ L E+ + T +V++ GR
Sbjct: 356 EGILPNRVTFISLLNGFT----TPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCE 411
Query: 385 MLGEALELIQSMPIQQNDVVWRSLL 409
+A + + + N + W S++
Sbjct: 412 SPDDARTVFDQLEL-PNLISWNSMI 435
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 170/375 (45%), Gaps = 11/375 (2%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L + K +H+ V + + F + LV T + GS+ A +F + +N++I
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNT--YTKCGSLTDARKVFDGMPCRSVGTWNSMI 233
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ EA F++ M + G D TF ++ AC + L+ G + + + FE
Sbjct: 234 SAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFE 293
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV +LI MY +C E A+ +F +M Q ++ +WSAII A A +G E L+ F M
Sbjct: 294 LDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMM 353
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E P +S+L+ T L+ H + + + +L+++Y +C
Sbjct: 354 QQEGIL-PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCES 412
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+ +F + ++++ MI + +AL +F M ++G++PD V ++ +L A
Sbjct: 413 PDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGA 472
Query: 344 C---SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
C SH C + L P VQ +V++ +AG L A ++Q M QQ
Sbjct: 473 CTIGSHGRTRKLVHQCVEESGLGGS--PLVQ--TSLVNMYAKAGELDVAEVILQEMDEQQ 528
Query: 401 NDVVWRSLLSASKVH 415
W L++ +H
Sbjct: 529 -ITAWNVLINGYALH 542
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 16/247 (6%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY +C + A A F ++ ++V SW+ +I+A++S + E L LF M E P
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGV-APNAI 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
LV+VL++C L G H + N +V T+L++MY KCG L +F M
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 295 ADKCQLTYSVMISGLAMHGQG-KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
A+K +T++ M+ ++ G K A+ +F+ ML EG++ + + ++ VL++ + +G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 354 LLCFDRMKLEYRIVPTVQHY------GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
K + V +H +V+ + G L +A ++ MP + W S
Sbjct: 180 -------KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVG-TWNS 231
Query: 408 LLSASKV 414
++SA +
Sbjct: 232 MISAYSI 238
>gi|449517497|ref|XP_004165782.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g15720-like [Cucumis sativus]
Length = 603
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/572 (37%), Positives = 327/572 (57%), Gaps = 6/572 (1%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C +L H+ LK GF N ++L+ C + + S+ A +F ++ P
Sbjct: 34 LRNCNDLISSISTHSIALKLGFLNNTVNVNHLI-NCYV-RFRSIATAHQLFDEMPNPNVV 91
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +L+ G+V + ALFL+ EM V P++FTF KAC+ L L+ G H HV
Sbjct: 92 SWTSLMAGYVDNGQPSTALFLFGEMLRSPVVPNDFTFATAIKACSILSNLRHGEMFHAHV 151
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
G+ ++ V +SLI+MYGKC V A +F M K++ SW+++IAA+A N E L
Sbjct: 152 EIFGYGGNIVVCSSLIDMYGKCNDVVKARGVFNSMSCKNIVSWTSMIAAYAQNAHGDEAL 211
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
K+F E + P +L SV+SAC LG L GK HG+ I + +V + L+DM
Sbjct: 212 KVFREFTSLSSEHPNPYMLASVISACASLGRLVSGKVMHGAAISLGCDSSEVVASVLVDM 271
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L+ +F +++ + Y+ MI A +G G+++L +F EM+R+GL+P+ +
Sbjct: 272 YAKCGSLDYSDKVFNRISNPSVIPYTSMIVSTAKYGFGRKSLQLFEEMVRKGLKPNHITL 331
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
VGVL ACSH+GL NEGL M +Y I+P +HY CVVD++ R G L +A +L +SM
Sbjct: 332 VGVLHACSHSGLPNEGLYYLTSMYEKYGIMPETKHYTCVVDMLARVGELDKAFDLAKSMD 391
Query: 398 IQQND--VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
+ +D ++W +LLSAS+ H ++I A + L N YV LSN+YA A
Sbjct: 392 VAPDDKALLWGALLSASRCHGRVDIAAEACQQLVNSNRQVAGAYVTLSNVYASAGDMEKA 451
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA-WDNIYEMIHQMEWQLKFEGY 514
K+R EM G+++ PG S +E+ Y F + + + A D + ++ +++ ++K GY
Sbjct: 452 HKLRVEMKRTGVHKEPGCSWIEIKDSSYIFYAGEITSCARGDEVLCLLRELDQKMKDRGY 511
Query: 515 -SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
V D++E+ + E++ HS++LA+ F LI + +G IRI +NLRMC+DCH K
Sbjct: 512 VRGRKGLVFVDIEEEAEEEKVWLHSERLALGFGLISIPKGLTIRIMKNLRMCSDCHEAFK 571
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I ERE +VRD RFH FK+G C+C +W
Sbjct: 572 LISEIMEREFVVRDINRFHHFKNGCCTCNGFW 603
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 332/589 (56%), Gaps = 29/589 (4%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR--QIDEPGAFDFNT 101
L VH V+K+GF + +++V S + A +F I++ +N+
Sbjct: 181 LRRGSAVHGLVVKYGFGVSTHLGNSMVHM--YSACKDVGGAWRVFNGIPIEQRDVVSWNS 238
Query: 102 LIRGFVKEVEFEEALFLYNEMFERG---VEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
LI GF E E AL + +M G VEP+ T AL K+CA+L ++ +H ++
Sbjct: 239 LISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298
Query: 159 K----VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ D+ V +L++M+ +C + A IF ++ K+V WSA+IA +
Sbjct: 299 SRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPE 358
Query: 215 ECLKLFGEMNNEKCW-----RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
E L+LF +M E +P LVSV++AC+ LGA H + +
Sbjct: 359 EALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDAR 418
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ ++LIDM KCG +E G +F M + + +++S MI +HG+GK AL +FSEM
Sbjct: 419 IASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRT 478
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G EP+++ Y+ VLSACSHAGLV +G CF+ M+ +Y + PT +HY C+VDL+GRAG L
Sbjct: 479 GGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA +I +MPI+ + +W SLL+A +H N ++GEI K + ++S+ +VLL+NMY
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYE 598
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
A RW DV ++R E+ GL + PG S +E+ +VY F+++DRSHP + IY+ + ++
Sbjct: 599 DAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDE 658
Query: 508 QL-KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI----------HLSQGSPI 556
++ K Y + + D D R K HS++LAIAF LI L +PI
Sbjct: 659 RVRKAAKYVTETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPI 718
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLR+C DCH YTKL+S + +RE+IVRD RFH F+DG CSC DYW
Sbjct: 719 RITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 166/348 (47%), Gaps = 25/348 (7%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
Y CSI F +N+LI + + AL + M V +NFTFPAL KACA
Sbjct: 9 YXCSI----SHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACA 63
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS--VASW 200
L+ L +Q+H ++ ++G D F +L++ YGKC +A+ +F +M + S V SW
Sbjct: 64 ALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSW 123
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA---------LDL 251
+A+I+A++SNG E FG M + W E V V+S + A L
Sbjct: 124 TALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRR 183
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGL 309
G HG +++ ++ + S++ MY C + +F + + ++++ +ISG
Sbjct: 184 GSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGF 243
Query: 310 AMHGQGKEALSIFSEMLREG---LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR- 365
++G+ + AL F +M+ EG +EP+ V + +L +C+ G V + + +
Sbjct: 244 XLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSS 303
Query: 366 --IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ V ++D+ R G L A E+ + +N V W ++++
Sbjct: 304 LLVAKDVVVLTALLDMHARCGNLALAREIFDGVE-GKNVVCWSAMIAG 350
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 326/577 (56%), Gaps = 20/577 (3%)
Query: 37 ILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
ILK+C +L +++H HV K G PF + L++ G + A +F + +
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM--YCKCGLVADARKVFEENPQ 116
Query: 94 PGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N LI G+ + +A +++ M E GV D+ T L C + L G
Sbjct: 117 SSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGR 176
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+HG K G + ++ V NS I MY KC VE +F +M K + +W+A+I+ ++ NG
Sbjct: 177 SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG 236
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + L+L+ +M + P+ LVSVLS+C HLGA +G + N NV V
Sbjct: 237 LAYDVLELYEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVS 295
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ I MY +CG L K +F +M K ++++ MI MHG G+ L +F +M++ G+
Sbjct: 296 NASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIR 355
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V+V VLSACSH+GL ++GL F MK EY++ P +HY C+VDL+GRAG L EA+E
Sbjct: 356 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME 415
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+SMP++ + VW +LL A K+H N+++ E+A + + ++ YVL+SN+Y+ ++
Sbjct: 416 FIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
+ +IR M + + PG+S VE +V+ F++ DRSH + ++ M+ ++E
Sbjct: 476 QEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE----- 530
Query: 512 EGYSPDISQVLRDVDEDEKRE---RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+ ++ ++D D E + HS++LAIAF +++ G+ I + +NLR+C DC
Sbjct: 531 ----TSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDC 586
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H + K +S I +R+ +VRD RFH FKDG CSC+DYW
Sbjct: 587 HVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 5/325 (1%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +R + F E++ LY M G PD F+FP + K+CA L G Q+H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS--WSAIIAAHASNGLWSEC 216
K G E + FV +LI+MY KC V A +F++ Q S S ++A+I+ + +N ++
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+F M E + ++ ++ CT L LG+ HG ++ V V S I
Sbjct: 141 AYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY+KCG +E G LF M K +T++ +ISG + +G + L ++ +M G+ PD
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V VLS+C+H G G ++ VP V + + R G L +A + M
Sbjct: 260 LVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIG 421
P+ ++ V W +++ +H EIG
Sbjct: 319 PV-KSLVSWTAMIGCYGMHGMGEIG 342
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 312/559 (55%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++VH VLK F WN F + L+ S +D +F ++ E +N +I +
Sbjct: 261 QQVHGFVLKTNFVWNVFVGNALLDY--YSKHDQVDEVGKLFXEMPELDGISYNVVITSYA 318
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+F+E+ L+ ++ + F F L L+ G QIH VG +
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V+N+L++MY KC + A IF + KS W+A+I+A+ G E + +F +M
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+++ S+L AC +L ++ LG+ H LIR+ NV ++L+D Y KCGC+
Sbjct: 439 V-PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ F M ++ ++++ +IS A +G L+ F +M++ G +PD V ++ VLSACSH
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G V E L F+ M Y + P +HY +VD++ R G EA +L+ MP + ++++W S
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L++ ++H N E+ + AA LF + + Y+ +SN+YA A +W +VAK++ M +G
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ + + F + D+SHP I I+ + +++ +GY PD + L DVD
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVD 737
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E K E LK HS++ AIAFAL++ GSPI + +NLR C DCH K+IS I EREIIVR
Sbjct: 738 EVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVR 797
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH FKDG CSC DYW
Sbjct: 798 DSSRFHHFKDGVCSCGDYW 816
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 189/371 (50%), Gaps = 5/371 (1%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H HV+K G+ +N ++LV +H + A +F+ + FN+L+ G+
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTH--CLYLASQLFKHMLNKDTVTFNSLMTGYSN 218
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
E EEA+ L+ E+ G++P +FTF AL A L K G Q+HG V K F ++FV
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+L++ Y K ++V+ +F +M + S++ +I ++A NG + E LF ++ +
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF 338
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
R + ++LS T L +G+ H I + VE +L+DMY KC ++
Sbjct: 339 DR-RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F +A K + ++ MIS G+ +E +++FS+M R G+ D + +L AC++
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
++ G + + + V ++D + G + +A++ MP ++N V W +L
Sbjct: 458 SISLGRQ-LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNAL 515
Query: 409 LSASKVHHNLE 419
+SA + N++
Sbjct: 516 ISAYAQNGNVD 526
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 15/332 (4%)
Query: 5 SVLHQSLLLTQPEEPPKGPELNLR-----------LKEQECLTILKTCKNLEEFKKVHAH 53
+ L Q+L+L P P LN C + + LE VHAH
Sbjct: 6 ATLFQNLVLRN--SPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAH 63
Query: 54 VLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
+ + N++ + L +G + A +F + E A + LI G+++ + +
Sbjct: 64 QVFDQMPAKNTISLNMMISGHLK-FGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSK 122
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
EA LY +M G+EPD T L +L+ +QIH HV K+G+E +L V NSL+
Sbjct: 123 EAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLV 182
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
+ Y K + AS +FK M K ++++++ +++ GL E ++LF E++N +P +
Sbjct: 183 DAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI-KPSD 241
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
++LSA L G+ HG +++ NV V +L+D Y K +++ LF
Sbjct: 242 FTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXE 301
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
M + ++Y+V+I+ A +GQ KE+ +F ++
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKESFDLFRKL 333
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Query: 147 LKEGMQIHGH-VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
L+ G +H H VF + N +I+ + K K+ A +F M +++ SW+ +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ + E +L+ +M P+ LV++LS L ++ H +I+
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGI-EPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYE 172
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N++V SL+D Y K CL LF+ M +K +T++ +++G + G +EA+ +F E+
Sbjct: 173 YNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLEL 232
Query: 326 LREGLEPDDVVYVGVLSAC 344
G++P D + +LSA
Sbjct: 233 HNSGIKPSDFTFAALLSAA 251
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/571 (37%), Positives = 323/571 (56%), Gaps = 6/571 (1%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LK+C LE F K VH LK + + F L+ A S G + A +F ++ +
Sbjct: 244 LKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKS--GEIIDAQRLFEEMPKT 301
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++ +I + + +EAL L+ M + V P+NFTF ++ +ACA +L G QIH
Sbjct: 302 DLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIH 361
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
V K G ++FV N+++++Y KC ++E + +F+++ ++ +W+ II + G
Sbjct: 362 SCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGE 421
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
+ LF M E +P E SVL A L AL+ G H I+ + + +V SL
Sbjct: 422 RAMNLFTHML-EHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSL 480
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG + F M + +++++ MI G +MHG EAL++F M +P+
Sbjct: 481 IDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK 540
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +VGVLSACS+AGL+ +G F+ M +Y I P ++HY C+V L+GR G EA++LI
Sbjct: 541 LTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIG 600
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
+ Q + +VWR+LL A +H +++G + A+++ ++ H + +VLLSNMYA A RW +
Sbjct: 601 EIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDN 660
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
VA +R M K + + PG S VE V+ F D SHP I M+ + + + GY
Sbjct: 661 VAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGY 720
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
PD + VL DV +DEK L HS++LA+A+ LI IRI +NLR+C DCHT KL
Sbjct: 721 VPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKL 780
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS + +REI++RD RFH F+ G CSC DYW
Sbjct: 781 ISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 189/386 (48%), Gaps = 11/386 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+HA V K G + F + L+ A S G++D A +F I + ++ + +
Sbjct: 158 LHACVYKLGHHADAFVGTALID--AYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAEN 215
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+EE+L L+N+M G +P+NFT K+C L+A G +HG K ++ DLFV
Sbjct: 216 CFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVG 275
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
+L+ +Y K ++ A +F++M + + WS +IA +A + E L LF M
Sbjct: 276 IALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSV- 334
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P SVL AC +LDLGK H +++ NV V +++D+Y KCG +E +
Sbjct: 335 VPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMK 394
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF + D+ +T++ +I G G G+ A+++F+ ML ++P +V Y VL A +
Sbjct: 395 LFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAA 454
Query: 350 VNEGLLCFD-RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
+ GL +K Y V + ++D+ + G + +A M ++++V W ++
Sbjct: 455 LEPGLQIHSLTIKTMYNKDTVVAN--SLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAM 511
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSH 434
+ +H + A NLF + H
Sbjct: 512 ICGYSMHGM----SMEALNLFDMMQH 533
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 177/362 (48%), Gaps = 5/362 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +H H+LK G + F + L+ S+ S+ A +F ++ + F TL +G+
Sbjct: 55 KHLHCHILKRGTSLDLFAQNILLNFYVQSN--SLQDASKLFDEMPQTNTISFVTLAQGYS 112
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ +F +AL +F+ G E + F F L K + +H V+K+G D F
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +LI+ Y V+ A +F + K + SW+ ++A +A N + E L+LF +M
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++P + L +C L A ++GK HG ++ ++ V +L+++Y K G +
Sbjct: 233 -YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDA 291
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
LF M + +S+MI+ A + KEAL +F M + + P++ + VL AC+ +
Sbjct: 292 QRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASS 351
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
++ G L++ + V ++D+ + G + +++L + +P +NDV W +
Sbjct: 352 VSLDLGKQ-IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWNT 409
Query: 408 LL 409
++
Sbjct: 410 II 411
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 117/272 (43%), Gaps = 24/272 (8%)
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G +H H+ K G DLF QN L+N Y + ++ AS +F +M Q + S+ + ++
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ + + L + E + ++L + L H + + +
Sbjct: 114 DHQFHQALHFILRIFKEG-HEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+LID Y G ++ +F + K ++++ M++ A + +E+L +F++M G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC----------VVDL 379
+P++ G L +C N G + V GC +++L
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVG-----------KSVHGCALKGCYDHDLFVGIALLEL 281
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++G + +A L + MP + D++ SL+ A
Sbjct: 282 YAKSGEIIDAQRLFEEMP--KTDLIPWSLMIA 311
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 315/562 (56%), Gaps = 3/562 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+EE ++ H +LK GF ++ + + LV+ S + A ++ ++ +N+++
Sbjct: 149 VEEGRQCHGLLLKTGFSFHNYVRNALVSM--YSKCSIVQDAMGVWNEVPVNDIVAYNSIL 206
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
V+ E L + M V+ D TF F CA L+ L+ G+ +HG + E
Sbjct: 207 SSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVE 266
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
CD +V +++INMYGKC K A +F + ++V W+A++A+ NG + E L LF +M
Sbjct: 267 CDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM 326
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E + E +L+AC L A G HG ++ +V+V +LI+MY K G
Sbjct: 327 EQENV-KSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGD 385
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E +F M + +T++ MI G + HG GK+AL +F +ML P+ V + GVLSA
Sbjct: 386 IEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSA 445
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
C H GLV EG + ++ + P ++HY C+V L+ + G L EA +++ P++ + V
Sbjct: 446 CGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVV 505
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
WR+LL+A VH N +G A+ + +++ + Y LLSN+YA+ +RW V K+R M
Sbjct: 506 AWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMR 565
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
K + + PG S +E+ + F S+D HP + Y+ + ++ +K GY+PDI VL
Sbjct: 566 DKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLH 625
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
DV++++K L HS+KLAIA+ L+ L + I + +NLR+C+DCH+ +LIS + R I
Sbjct: 626 DVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVI 685
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
+VRD RFH F+DG CSC DYW
Sbjct: 686 VVRDANRFHHFRDGRCSCLDYW 707
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 200/419 (47%), Gaps = 24/419 (5%)
Query: 8 HQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCAS 67
H LL P P L + L + KNL+ K +H+H++ + +
Sbjct: 14 HAPFLLRPNAVSPSSP-----LDLIKLLKLSADTKNLKVGKTIHSHLI----VTSRATEN 64
Query: 68 NLVATCALSHW----GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
+++ +L ++ + A ++F ++ E ++ L+ G++ + + L +M
Sbjct: 65 SIIEVNSLINFYAKVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMI 124
Query: 124 ERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
G V P+ + +C ++EG Q HG + K GF +V+N+L++MY KC V
Sbjct: 125 SEGNVSPNEYILAIAISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIV 184
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
+ A ++ ++ + ++++I+++ NG E L++ M +E + ++ V+ S
Sbjct: 185 QDAMGVWNEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESV-KWDKVTFVNAFSL 243
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C L L LG HG ++ + + V +++I+MY KCG +F + + + +
Sbjct: 244 CASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLW 303
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV---NEGLLCFDR 359
+ +++ +G +EAL++FS+M +E ++ ++ Y +L+AC AGL N LL
Sbjct: 304 TAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNAC--AGLSARRNGSLLHGHS 361
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
K ++ V + ++++ ++G + A ++ M + ++ + W +++ HH L
Sbjct: 362 EKSGFKHHVMVGN--ALINMYAKSGDIEAAKKVFSDM-MHRDIITWNAMICGFS-HHGL 416
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 312/559 (55%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++VH VLK F WN F + L+ S +D +F ++ E +N +I +
Sbjct: 261 QQVHGFVLKTNFVWNVFVGNALLDY--YSKHDQVDEVGKLFYEMPELDGISYNVVITSYA 318
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+F+E+ L+ ++ + F F L L+ G QIH VG +
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V+N+L++MY KC + A IF + KS W+A+I+A+ G E + +F +M
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+++ S+L AC +L ++ LG+ H LIR+ NV ++L+D Y KCGC+
Sbjct: 439 V-PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ F M ++ ++++ +IS A +G L+ F +M++ G +PD V ++ VLSACSH
Sbjct: 498 IKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHC 557
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G V E L F+ M Y + P +HY +VD++ R G EA +L+ MP + ++++W S
Sbjct: 558 GFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSS 617
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L++ ++H N E+ + AA LF + + Y+ +SN+YA A +W +VAK++ M +G
Sbjct: 618 VLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRG 677
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ + + F + D+SHP I I+ + +++ +GY PD + L DVD
Sbjct: 678 VRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVD 737
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E K E LK HS++ AIAFAL++ GSPI + +NLR C DCH K+IS I EREIIVR
Sbjct: 738 EVIKIESLKYHSERFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVR 797
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH FKDG CSC DYW
Sbjct: 798 DSSRFHHFKDGVCSCGDYW 816
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 189/371 (50%), Gaps = 5/371 (1%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H HV+K G+ +N ++LV +H + A +F+ + FN+L+ G+
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTH--CLYLASQLFKHMLNKDTVTFNSLMTGYSN 218
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
E EEA+ L+ E+ G++P +FTF AL A L K G Q+HG V K F ++FV
Sbjct: 219 EGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFV 278
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+L++ Y K ++V+ +F +M + S++ +I ++A NG + E LF ++ +
Sbjct: 279 GNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRF 338
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
R + ++LS T L +G+ H I + VE +L+DMY KC ++
Sbjct: 339 DR-RQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F +A K + ++ MIS G+ +E +++FS+M R G+ D + +L AC++
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
++ G + + + V ++D + G + +A++ MP ++N V W +L
Sbjct: 458 SISLGRQ-LHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNAL 515
Query: 409 LSASKVHHNLE 419
+SA + N++
Sbjct: 516 ISAYAQNGNVD 526
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 15/332 (4%)
Query: 5 SVLHQSLLLTQPEEPPKGPELNLR-----------LKEQECLTILKTCKNLEEFKKVHAH 53
+ L Q+L+L P P LN C + + LE VHAH
Sbjct: 6 ATLFQNLVLRN--SPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAH 63
Query: 54 VLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
+ + N++ + L +G + A +F + E A + LI G+++ + +
Sbjct: 64 QVFDQMPAKNTISLNMMISGHLK-FGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSK 122
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
EA LY +M G+EPD T L +L+ +QIH HV K+G+E +L V NSL+
Sbjct: 123 EAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLV 182
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
+ Y K + AS +FK M K ++++++ +++ GL E ++LF E++N +P +
Sbjct: 183 DAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGI-KPSD 241
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
++LSA L G+ HG +++ NV V +L+D Y K +++ LF
Sbjct: 242 FTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYE 301
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
M + ++Y+V+I+ A +GQ KE+ +F ++
Sbjct: 302 MPELDGISYNVVITSYAWNGQFKESFDLFRKL 333
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 2/199 (1%)
Query: 147 LKEGMQIHGH-VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
L+ G +H H VF + N +I+ + K K+ A +F M +++ SW+ +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ + E +L+ +M P+ LV++LS L ++ H +I+
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGI-EPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYE 172
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N++V SL+D Y K CL LF+ M +K +T++ +++G + G +EA+ +F E+
Sbjct: 173 YNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLEL 232
Query: 326 LREGLEPDDVVYVGVLSAC 344
G++P D + +LSA
Sbjct: 233 HNSGIKPSDFTFAALLSAA 251
>gi|297743485|emb|CBI36352.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/631 (33%), Positives = 332/631 (52%), Gaps = 78/631 (12%)
Query: 19 PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
PP P L + L+++KTCK++ + K++H+ + G NP + ++A C
Sbjct: 9 PP--PTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHEL 66
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M+YA +F + P F +N +I+G+ + A+ +Y EM ERGV PD +T+P L
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
K + A+K G ++H H+ K+GF ++FVQN+LI++Y +V A +F + + V
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I+ + + + E +KLF EM + P LVSVLSAC+ L L++GK H
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVL-PSSITLVSVLSACSKLKDLNVGKRVH-- 243
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
RN F M ++ ++++ MI G + KE
Sbjct: 244 --RN---------------------------YFDKMPERDFVSWTAMIDGYLQVNRFKEV 274
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGL----------------------------- 349
LS+F EM ++PD+ V +L+AC+H G
Sbjct: 275 LSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDM 334
Query: 350 ------VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG--MLGEAL-------ELIQ 394
V + + F+ M +I T +G ++ G M + L E+I+
Sbjct: 335 YFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVIK 394
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
+MP++ N +VW SLL A +VH + E+ E+AA+ + ++ + + YVLL N+YA RW
Sbjct: 395 NMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEK 454
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
+ ++R M +G+ ++PG SL+E+ V++FV+ D+ HP IY + +M LKF GY
Sbjct: 455 LHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGY 514
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
SPD S+V D+ E+EK + HS+KLAIAF LI G IRI +NLRMC DCH KL
Sbjct: 515 SPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKL 574
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S +Y RE+IVRDR RFH F+ G+CSC+DYW
Sbjct: 575 VSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 605
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/605 (34%), Positives = 339/605 (56%), Gaps = 15/605 (2%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP 63
T ++ +L E P L L +T ++L++ + +HAH+ F +
Sbjct: 45 TGIIRDTLDSVDARELAATPRLYHSL-----ITACARYRSLDDARAIHAHLAGSQFAGSV 99
Query: 64 FCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
F ++L+ C G++ A +F + + +LI G+ + +EAL L
Sbjct: 100 FLDNSLIHLYCKC-----GAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLP 154
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M +P+ FTF +L KA + G QIH K + D++V ++L++MY +C
Sbjct: 155 GMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCG 214
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+++ A A+F Q++ K+ SW+A+IA A G L +F EM + SV
Sbjct: 215 RMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNG-FEATHFTYSSVF 273
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SA +GAL+ GK H +I++ L+ V +++DMY K G + +F + K +
Sbjct: 274 SAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVV 333
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
T++ M++ A +G G+EA++ F EM + G+ + + ++ +L+ACSH GLV EG FD M
Sbjct: 334 TWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM 393
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
K EY + P + HY VVDL+GRAG+L +AL I MP++ VW +LL + ++H N +I
Sbjct: 394 K-EYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKI 452
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
G+ AA ++F+++ VLL N+YA +W A++R M + G+ + P S VE+
Sbjct: 453 GQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIEN 512
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
V+ FV+ D +HP + IY+ ++ Q++ GY P+ VL VDE E++ +L+ HS+K
Sbjct: 513 SVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEK 572
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
+A+AFALI++ G+ IRI +N+R+C DCH+ + IS +++REI+VRD RFH F G+CS
Sbjct: 573 IALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCS 632
Query: 601 CRDYW 605
C DYW
Sbjct: 633 CGDYW 637
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/589 (37%), Positives = 332/589 (56%), Gaps = 29/589 (4%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR--QIDEPGAFDFNT 101
L VH V+K+GF + +++V S + A +F I++ +N+
Sbjct: 181 LRRGSAVHGLVVKYGFGVSTHLGNSMVHM--YSACKDVGGAWRVFNGIPIEQRDVVSWNS 238
Query: 102 LIRGFVKEVEFEEALFLYNEMFERG---VEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
LI GF E E AL + +M G VEP+ T AL K+CA+L ++ +H ++
Sbjct: 239 LISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYIS 298
Query: 159 K----VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ D+ V +L++M+ +C + A IF ++ K+V WSA+IA +
Sbjct: 299 SRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPE 358
Query: 215 ECLKLFGEMNNEKCW-----RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
E L+LF +M E +P LVSV++AC+ LGA H + +
Sbjct: 359 EALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDAR 418
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ ++LIDM KCG +E G +F M + + +++S MI +HG+GK AL +FSEM
Sbjct: 419 IASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRT 478
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G EP+++ Y+ VLSACSHAGLV +G CF+ M+ +Y + PT +HY C+VDL+GRAG L
Sbjct: 479 GGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLD 538
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA +I +MPI+ + +W SLL+A +H N ++GEI K + ++S+ +VLL+NMY
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYE 598
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
A RW DV ++R E+ GL + PG S +E+ +VY F+++DRSHP + IY+ + ++
Sbjct: 599 DAGRWDDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDE 658
Query: 508 QL-KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALI----------HLSQGSPI 556
++ K Y + + D D R K HS++LAIAF LI L +PI
Sbjct: 659 RVRKAAKYVTETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPI 718
Query: 557 RIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
RI +NLR+C DCH YTKL+S + +RE+IVRD RFH F+DG CSC DYW
Sbjct: 719 RITKNLRVCRDCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDYW 767
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 25/348 (7%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
Y CSI F +N+LI + + AL + M V +NFTFPAL KACA
Sbjct: 9 YHCSI----SHKDTFHWNSLIAKNATQ-NPQTALTFFTRMQAHAVPSNNFTFPALLKACA 63
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS--VASW 200
L+ L +Q+H ++ ++G D F +L++ YGKC +A+ +F +M + S V SW
Sbjct: 64 ALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSW 123
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA---------LDL 251
+A+I+A++SNG E K FG M + W E V V+S + A L
Sbjct: 124 TALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRR 183
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGL 309
G HG +++ ++ + S++ MY C + +F + + ++++ +ISG
Sbjct: 184 GSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGF 243
Query: 310 AMHGQGKEALSIFSEMLREG---LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR- 365
++G+ + AL F +M+ EG +EP+ V + +L +C+ G V + + +
Sbjct: 244 TLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSS 303
Query: 366 --IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ V ++D+ R G L A E+ + +N V W ++++
Sbjct: 304 LLVAKDVVVLTALLDMHARCGNLALAREIFDGVE-GKNVVCWSAMIAG 350
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 327/563 (58%), Gaps = 12/563 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+ HA +++ G + ++ N+ + C+L +D A F ++ +NT+I
Sbjct: 63 RACHAQIIRIGLEMDILTSNMLINMYSKCSL-----VDSARKKFNEMPVKSLVSWNTVIG 117
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+ E EAL L +M G + FT ++ CA A+ E MQ+H K +
Sbjct: 118 ALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDS 177
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+ FV +L+++Y KC ++ AS +F+ M +K+ +WS+++A + NG E L +F N
Sbjct: 178 NCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIF--RN 235
Query: 225 NEKCWRPEESILVS-VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ ++ ++S +SAC L L GK H ++ N+ V +SLIDMY KCGC
Sbjct: 236 AQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGC 295
Query: 284 LEKGLCLFR-MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ + +F+ ++ + + ++ MISG A H + EA+ +F +M + G PDDV YV VL+
Sbjct: 296 IREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLN 355
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSH GL EG FD M ++ + P+V HY C++D++GRAG++ +A +LI+ MP
Sbjct: 356 ACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATS 415
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+W SLL++ K++ N+E EIAAK LF++ ++ +++LL+N+YA ++W +VA+ R +
Sbjct: 416 SMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLL 475
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
+ + G S +E+ K++ F +R+HP D+IY + + +LK Y D S L
Sbjct: 476 RETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDL 535
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DV+E+ K+ L+ HS+KLAI F L+ L + PIRI +NLR+C DCHT+ KL+S RE
Sbjct: 536 HDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSRE 595
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFH FKDG CSC ++W
Sbjct: 596 IIVRDTNRFHHFKDGFCSCGEFW 618
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 159/356 (44%), Gaps = 11/356 (3%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L + CAK ++ G H + ++G E D+ N LINMY KC V+ A F +M KS
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ SW+ +I A N E LKL +M E E +I SVL C A+ H
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTI-SSVLCNCAFKCAILECMQLH 167
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
I+ N V T+L+ +Y KC ++ +F M +K +T+S M++G +G +
Sbjct: 168 AFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHE 227
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EAL IF G + D + +SAC+ + EG + + + +
Sbjct: 228 EALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQ-VHAISHKSGFGSNIYVSSSL 286
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
+D+ + G + EA + Q + ++ V+W +++S H I + + Q P
Sbjct: 287 IDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKM-QQRGFFP 345
Query: 437 SD--YVLLSN------MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYK 484
D YV + N ++ Q+++D+ + ++ L+ S ++ A V+K
Sbjct: 346 DDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHK 401
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/655 (33%), Positives = 354/655 (54%), Gaps = 95/655 (14%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWN-PFCASNLVATCALSHWGSMDYACSIF------- 88
+L+ C +L K +H+ + GF + P + L+ S G + A ++F
Sbjct: 31 LLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIIL--YSKLGDLHSARTLFDHRHHHH 88
Query: 89 -RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP-----------A 136
P +F NT++R + EA+ LY M GV +NFT+P A
Sbjct: 89 HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGA 148
Query: 137 LFKACAKLQALKEG-----------MQIHGHVFKVGFECDLFVQ---------NSLINMY 176
+F Q ++ G + ++ ++G ++F + ++I +Y
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 177 GKCEK-----------------------VEFASAI----------------FKQMDQKSV 197
+ E+ + ASA+ F +M++++
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNG 268
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW+++++ + NG ++ L LF +M +C P + ++SAC++LG+ LG+ H
Sbjct: 269 ISWNSMLSGYTQNGRPTDALSLFNQMQASEC-DPNPVTALIMVSACSYLGSKHLGRKLHN 327
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL------TYSVMISGLAM 311
+I + ++ + +++DMY+KCG L+ + +F + C+L +++V+ISG +
Sbjct: 328 FVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMF----NNCELGERDVSSWNVLISGYGV 383
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF-DRMKLEYRIVPTV 370
HG GKEAL +FS M EG+EP+D+ + +LSACSHAGL++EG CF D KL R P +
Sbjct: 384 HGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVR--PEM 441
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HY C+VD++GRAG L EA LI+ +P + +D VW +LL A ++H N E+GEIAA NLFQ
Sbjct: 442 KHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQ 501
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
+ H YVL+SN+YA + +W +V +R M S+GL + FS++E +V+ F + D+
Sbjct: 502 LEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQ 561
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL 550
S P + +Y + + ++K GY PD+S VL DV+ ++K L HS+KLA+AF ++ +
Sbjct: 562 SSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKM 621
Query: 551 SQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
QG PI++ +NLR+C+DCH K IS IY R+IIVRD RFH F+ G CSC DYW
Sbjct: 622 DQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 314/557 (56%), Gaps = 4/557 (0%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VH+ K G + + L++ S G ++ A +F +++P +N LI G+
Sbjct: 234 VHSFAEKCGLAEHEHVLTGLISL--YSKCGDVESARCLFDMMEKPDLVAYNALISGYSVN 291
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
++ L+ E+ G+ P++ T AL + +HG V K GF + V
Sbjct: 292 GMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVS 351
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
++ ++ + +E A F M +K++ SW+A+I+ +A NGL + LF +M
Sbjct: 352 TAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNV- 410
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
RP + S LSAC LGAL LGK H + NV V T+LIDMY KCG + +
Sbjct: 411 RPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARR 470
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M +K ++++ MI+G +HGQG EAL ++ +ML L P ++ VL ACSH GL
Sbjct: 471 IFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGL 530
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ-NDVVWRSL 408
V EG F M +Y I P ++H C+VDL+GRAG L EA ELI P VW +L
Sbjct: 531 VEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGAL 590
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A VH + ++ ++A++ LF+++ + YVLLSN++ +++ + A +R E S+ L
Sbjct: 591 LGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLV 650
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
++PG++L+E+ K + F++ DR+HP + IY + ++ ++ GY P+ L DV+E+
Sbjct: 651 KTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEE 710
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
EK +K HS+KLAIAF L+ G+ IRI +NLR+C DCH TK IS + +R I+VRD
Sbjct: 711 EKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDA 770
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+DG CSC DYW
Sbjct: 771 SRFHHFRDGVCSCGDYW 787
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 177/370 (47%), Gaps = 13/370 (3%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFK 139
+D+A +F + P +NTL+ G + EA+ + M G V PD T ++
Sbjct: 165 VDHARKVFDTVPSPDTVLWNTLLAG----LSGSEAVESFARMVCDGSVRPDATTLASVLP 220
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
A A++ + G +H K G V LI++Y KC VE A +F M++ + +
Sbjct: 221 AAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMMEKPDLVA 280
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
++A+I+ ++ NG+ + LF E+ W P S LV+++ + G L +C HG +
Sbjct: 281 YNALISGYSVNGMVGSSVNLFTELMTLGLW-PNSSTLVALIPVHSPFGHDLLAQCLHGFV 339
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+++ N V T++ ++ + +E F M +K +++ MISG A +G + A+
Sbjct: 340 LKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAV 399
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
++F +M++ + P+ + LSAC+ G ++ G R+ E + P V ++D+
Sbjct: 400 ALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKW-LHRIITEEDLEPNVYVMTALIDM 458
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH--PS 437
+ G + EA + +M +N V W ++++ +H G A K + H P+
Sbjct: 459 YAKCGSISEARRIFNTMD-NKNVVSWNAMIAGYGLHGQ---GAEALKLYKDMLDAHLLPT 514
Query: 438 DYVLLSNMYA 447
LS +YA
Sbjct: 515 SATFLSVLYA 524
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 325/559 (58%), Gaps = 41/559 (7%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
++ A F + E +N ++ G+ + EE L L++EM G+EPD T+ + A
Sbjct: 210 LEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISA 269
Query: 141 CAKL--QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ------- 191
C+ L + H ++ C FV+ +L++MY KC + A IF +
Sbjct: 270 CSSRGDPCLAASLVRTLHQKQIQLNC--FVRTALLDMYAKCGSIGAARRIFDELGAYRNS 327
Query: 192 -------------------------MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
M ++V +W+++IA +A NG + ++LF EM
Sbjct: 328 VTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 387
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
K P+E +VSV+SAC HLGAL+LG L N L++ ++I MY +CG +E
Sbjct: 388 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMED 447
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F+ MA + ++Y+ +ISG A HG G EA+++ S M G+EPD V ++GVL+ACSH
Sbjct: 448 AKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSH 507
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
AGL+ EG F+ +K P + HY C+VDL+GR G L +A ++ MP++ + V+
Sbjct: 508 AGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYG 562
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
SLL+AS++H +E+GE+AA LF++ + +++LLSN+YA A RW DV +IR M G
Sbjct: 563 SLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGG 622
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ ++ G+S VE K++KF+ DRSH D+IY+++ ++ +++ GY D S VLRDV+
Sbjct: 623 VKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVE 682
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+EK E + HS+KLAI +AL+ G+ IR+ +NLR+C DCHT K+IS + R IIVR
Sbjct: 683 EEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVR 742
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F DG CSC+DYW
Sbjct: 743 DNNRFHCFNDGLCSCKDYW 761
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 171/413 (41%), Gaps = 79/413 (19%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
E +I N +++HA ++ + + + L+ C Y +F
Sbjct: 3 ELGSIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLR-APPHYTHLLFNSTL 61
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P F F +++R + + + + ++ M GV PD F +P L K+ A G+
Sbjct: 62 NPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKS-----AGNGGIG 116
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASN 210
H HV K+G D FV+N++I+MY + + A +F ++ ++ VA W+A+++
Sbjct: 117 FHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS----- 171
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G W E + W L + NVI
Sbjct: 172 GYWK------WESEGQAQW-----------------------------LFDVMPERNVIT 196
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+++ Y K LE F M ++ ++++ M+SG A +G +E L +F EM+ G+
Sbjct: 197 WTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGI 256
Query: 331 EPDDVVYVGVLSACSHAG-------LVNE------GLLCFDRMKLEYRIVPTVQHYGCVV 377
EPD+ +V V+SACS G LV L CF R L +
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTAL--------------L 302
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
D+ + G +G A + + +N V W +++SA NL+ +A+ LF
Sbjct: 303 DMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLD----SARELFN 351
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GSM+ A +F+++ +NTLI GF EA+ L + M E G+EPD TF +
Sbjct: 443 GSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVL 502
Query: 139 KACAKLQALKEGMQI 153
AC+ L+EG ++
Sbjct: 503 TACSHAGLLEEGRKV 517
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/439 (41%), Positives = 285/439 (64%), Gaps = 1/439 (0%)
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
V N+L++MY K ++A +F++M K V SW++++ NG + E L+LF EM
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
P++ ++ +VLSAC L L+ GK H + +++ ++ V+ SL+ MY KCGC+E
Sbjct: 63 GI-HPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M + +T++ +I G A +G+G+E+L+ +++M+ G++PD + ++G+L ACSH
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
AGLV G F M+ Y I P +HY C++DL+GR+G L EA EL+ M +Q + VW+
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LL+A +VH N+E+GE AA NLF++ + YVLLSN+Y+ A +W + AK R M +G
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+++ PG S +E++ KV++F+S+DRSHP IY + ++ +K GY PD++ L D+D
Sbjct: 302 VSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+ K L HS+KLA+AF L+ + G+PIRI +NLR+C DCHT K +S ++ R +I+R
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D FH F++G CSC DYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 14/291 (4%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G DYA +F ++ + + +L+ G V +EEAL L+ EM G+ PD A+
Sbjct: 16 GYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVL 75
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
ACA+L L+ G Q+H + K G L V NSL++MY KC +E A+ +F M+ + V
Sbjct: 76 SACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVI 135
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A+I +A NG E L + +M +P+ + +L AC+H G ++ G+ S
Sbjct: 136 TWTALIVGYAQNGRGRESLNFYNBMIASGV-KPDFITFIGLLFACSHAGLVEHGRSYFQS 194
Query: 259 LIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMADKCQLT-YSVMISGLAMHGQ- 314
+ + + E +ID+ + G L + L MA + T + +++ +HG
Sbjct: 195 M-EEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNV 253
Query: 315 --GKEALSIFSEMLREGLEPDDVV-YVGVLSACSHAGLVNEGLLCFDRMKL 362
G+ A + E LEP + V YV + + S AG E MKL
Sbjct: 254 ELGERAANNLFE-----LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKL 299
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 314/527 (59%), Gaps = 10/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ F + ++ GFV+ +EA ++ EM E+ + ++ A+
Sbjct: 260 GLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMI 315
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ Q +++ ++ F + N+++ Y +C ++ A +F +M Q+
Sbjct: 316 AGYVQSQQIEKAREL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+I+ +A +G E L LF +M + S L LS+C + AL+LGK HG
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGI-LNRSALACALSSCAEIAALELGKQLHGR 430
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ I +L+ MY KCG +E+ +F + +K ++++ MI+G A HG GKEA
Sbjct: 431 LVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEA 490
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L++F E ++ ++PDDV VGVLSACSH G V++G+ F+ M Y I +HY C++D
Sbjct: 491 LALF-ESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMID 549
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EAL L++SMP + W +LL AS++H + E+GE AA+ +F++ +
Sbjct: 550 LLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGM 609
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW +V ++R++M KG+ + PG+S VE+ K + F D SHP + I
Sbjct: 610 YVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERI 669
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + +++ +LK +G+ VL DV+E+EK LK HS+KLA+AF ++ + G PIR+
Sbjct: 670 YAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRV 729
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I +R+IIVRD RFH F +G+CSC DYW
Sbjct: 730 IKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 165/377 (43%), Gaps = 68/377 (18%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A ++F Q+ E +N ++ GF + EEA ++++M + + ++ L
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLL 191
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A + +++ ++ F + ++ N L+ Y + ++++ A ++F +M +
Sbjct: 192 SAYVQNGRIEDARRL----FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKI 247
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL--VSVLSACTHLGALD------ 250
SW+ +I +A NGL SE +LF E+ P + +++S G LD
Sbjct: 248 SWNIMITGYAQNGLLSEARRLFEEL-------PIRDVFAWTAMVSGFVQNGMLDEATRIF 300
Query: 251 -----LGKCTHGSLI---------------------RNISALNVIVETSLIDMYVKCGCL 284
+ + ++I RN S+ N +V Y +CG +
Sbjct: 301 EEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTG-----YAQCGNI 355
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++ LF M + ++++ MISG A GQ +EAL +F +M R+G + LS+C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-----CVVDLMGRAGMLGEALELIQSMPIQ 399
+ + G +L R+V G ++ + G+ G + EA ++ + I
Sbjct: 416 AEIAALELG------KQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFED--IT 467
Query: 400 QNDVV-WRSLLSASKVH 415
+ D+V W ++++ H
Sbjct: 468 EKDIVSWNTMIAGYARH 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 55/339 (16%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N I ++++ + E AL ++N M R T+ A+ I G++
Sbjct: 63 WNRKISAYMRKGQCESALSVFNGMRRRST----VTYNAM---------------ISGYLS 103
Query: 159 KVGFEC-----------DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
F+C DL N +++ Y K + A A+F QM +K V SW+A+++
Sbjct: 104 NNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGF 163
Query: 208 ASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG E K+F +M NE W +LSA G ++ + L +
Sbjct: 164 AQNGFVEEARKIFDQMLVKNEISWN-------GLLSAYVQNGRIEDAR----RLFDSKMD 212
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
++ L+ YV+ L+ LF M + ++++++MI+G A +G EA +F E+
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Query: 326 -LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+R D + ++S G+++E F+ M + + G V ++
Sbjct: 273 PIR-----DVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYV-----QSQ 322
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
+ +A EL MP +N W ++++ N++ +I
Sbjct: 323 QIEKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKI 360
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/619 (33%), Positives = 332/619 (53%), Gaps = 24/619 (3%)
Query: 3 RTSVLHQSLLLTQPEEPPKGPELNL------------RLKEQECLTILKTCKNLEEFKKV 50
R SV + ++++ +E L+L R LT+ +L ++V
Sbjct: 204 RDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQV 263
Query: 51 HAHVLKWGFFWNPFCASNLVATCALSHWGS----MDYACSIFRQIDEPGAFDFNTLIRGF 106
H V + +SN+ +L + S +D +F ++ E +N +I G+
Sbjct: 264 HGLVARA-------TSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGY 316
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
L L+ EM + + +L + + G QIH + +G +
Sbjct: 317 AWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSED 376
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
V N+LI+MY KC ++ A F + K+ SW+A+I NG E L+LF M
Sbjct: 377 LVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRA 436
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
P+ + S + A ++L + LG+ H LIR+ +V ++L+DMY KCGCL++
Sbjct: 437 G-LSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDE 495
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
L F M ++ ++++ +IS A +GQ K A+ +F ML G +PD V ++ VLSACSH
Sbjct: 496 ALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSH 555
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
GL E + F+ M+ EY I P +HY CV+D +GR G + E++ MP + + ++W
Sbjct: 556 NGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWS 615
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
S+L + + H N ++ +AA+ LF + S + YV+LSN++A+A +W D A ++ M +G
Sbjct: 616 SILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRG 675
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
L + G+S VEV KVY F S D+++P I + + ++ ++ +GY PD S L+ VD
Sbjct: 676 LRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVD 735
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
+D K E LK HS++LAIAFALI+ G+PIR+ +NL C DCH+ K++S I R+IIVR
Sbjct: 736 DDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVR 795
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH FKDG CSC DYW
Sbjct: 796 DSSRFHHFKDGFCSCGDYW 814
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 180/369 (48%), Gaps = 19/369 (5%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H LK G + N + H G + A +F+++ + +N ++ G KE
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKH-GLLAAARRVFQEMPHRDSVTYNAMMMGCSKE 219
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
EAL L+ M +G+ FTF + + L G Q+HG V + ++FV
Sbjct: 220 GSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVN 278
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN---E 226
NSL++ Y KC+ ++ +F +M ++ S++ +IA +A N S L+LF EM + +
Sbjct: 279 NSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFD 338
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ P S+L SV + H+G +GK H L+ + +V +LIDMY KCG L+
Sbjct: 339 RQALPYASLL-SVAGSVPHIG---IGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDA 394
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
F DK ++++ MI+G +GQ +EAL +F M R GL PD + + A S+
Sbjct: 395 AKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSN 454
Query: 347 AGLVNEGLLCFDRMKLEYRI----VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
++ G R Y I + +V ++D+ + G L EAL+ MP ++N
Sbjct: 455 LAMIGLG-----RQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMP-ERNS 508
Query: 403 VVWRSLLSA 411
+ W +++SA
Sbjct: 509 ISWNAVISA 517
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFK---ACAKLQALKEGMQIHGHVFKVGF-ECDLFV 168
+A+ L+ +M GV PD T + A A +H K+G ++ V
Sbjct: 118 SDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVV 177
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
N+L++ Y K + A +F++M + +++A++ + G +E L LF M K
Sbjct: 178 CNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMR-RKG 236
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+VL+ T +G L LG+ HG + R S+ NV V SL+D Y KC CL++
Sbjct: 237 LAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSS-NVFVNNSLLDFYSKCDCLDEMK 295
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS--- 345
LF M ++ ++Y+VMI+G A + L +F EM + + Y +LS
Sbjct: 296 KLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVP 355
Query: 346 --------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
HA LV GL D + ++D+ + GML A ++
Sbjct: 356 HIGIGKQIHAQLVLLGLSSEDLVG------------NALIDMYSKCGMLDAA----KTNF 399
Query: 398 IQQND---VVWRSLLSA 411
I +ND V W ++++
Sbjct: 400 INKNDKTGVSWTAMITG 416
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 295/526 (56%), Gaps = 14/526 (2%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV--EPDNFTFPALFKACAKLQA 146
R + P D N +RG +L L + PD + KA A+
Sbjct: 60 RSLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSD 119
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+Q+H V ++G D+ + +L++ Y KC + A +F +M + VA+W++++A
Sbjct: 120 AHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAG 179
Query: 207 HASNGLWSECLKLFGEMNNE-----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A + L LF + N P E +V+ LSAC +G L G H R
Sbjct: 180 LAQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKR 239
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEAL 319
NV V SLIDMY KCG L + L +F + D+ ++Y+ I +MHG G +AL
Sbjct: 240 FGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDAL 299
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F EM +EPD V Y+ VL C+H+GLV++GL F+ M R+ P ++HYG +VDL
Sbjct: 300 RLFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDL 354
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG L EA + + SMP + V+W++LL A+K+H +E+ E+AA L ++ S+ DY
Sbjct: 355 LGRAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDY 414
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSN+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ HP W IY
Sbjct: 415 VLLSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIY 474
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ + ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G +R+
Sbjct: 475 RALEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVI 534
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH KLIS Y R I++RDR RFHRF+DG CSCRDYW
Sbjct: 535 KNLRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 580
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 346/613 (56%), Gaps = 32/613 (5%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
+ T E P L+ LK C + T + +H ++ G+ + AS+LV
Sbjct: 96 MRTASEAAPNEYTLSASLKA--CCVVGDTAAGV----GIHGLCVRAGYQEHDVVASSLVL 149
Query: 72 TCALSHWGSMDYACSIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEM--FERGVE 128
S G + A +F G +N ++ G+ +AL ++ EM E +
Sbjct: 150 V--YSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQ 207
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC--DLFVQNSLINMYGKCEKVEFAS 186
PD FTF +L KAC+ L A +EG Q+H + GF + + +L++MY KC ++ A
Sbjct: 208 PDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAM 267
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR----PEESILVSVLSA 242
+F+++++K+V W+A++ HA G +E L+LF + WR P+ +L SV+
Sbjct: 268 QVFERLERKNVIQWTAVVVGHAQEGQVTEALELF-----RRFWRSGARPDSHVLSSVVGV 322
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
++ G+ H I++ + +V S++DMY+KCG ++ +FR M +++
Sbjct: 323 LADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSW 382
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ M++GL HG G+EA+++F EM G+EPD+V Y+ +LSACSHAGLV+E F ++
Sbjct: 383 TTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR 442
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ + P +HY C+VDL+GRAG L EA +LI++MP++ VW++LLSA +VH ++ +G
Sbjct: 443 DRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGR 502
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A L ++ +P +YV LSN+ A A W + K+R M +GL + G S VEV ++V
Sbjct: 503 EAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEV 562
Query: 483 YKFV---SQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQ-VLRDVDEDEKRERLKGH 537
+ F ++ +HP +I ++ ME +++ + GY+ D ++ L DVDE+ + E L+ H
Sbjct: 563 HFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAH 622
Query: 538 SQKLAIAFALIH-----LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
S++LA+ L+ G PIR+ +NLR+C DCH + K +S + R ++VRD RFH
Sbjct: 623 SERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFH 682
Query: 593 RFKDGTCSCRDYW 605
RF+ G+CSC+DYW
Sbjct: 683 RFEHGSCSCKDYW 695
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 185/402 (46%), Gaps = 42/402 (10%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
++H + K GF + +NL+ G +D AC +F + + + L+ GF++
Sbjct: 25 QLHGAITKMGFGSDTMLGNNLIDM--YVKCGELDLACEVFGGMRDRNVVSWTALMVGFLR 82
Query: 109 EVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ L L EM P+ +T A KAC + G+ IHG + G++
Sbjct: 83 HGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDV 142
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKS-VASWSAIIAAHASNGLWSECLKLFGEM-NN 225
V +SL+ +Y K ++ A +F S +A+W+A+++ +A G + L +F EM +
Sbjct: 143 VASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRH 202
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKCGC 283
E +P+E S+L AC+ LGA G H ++ + +A N I+ +L+DMYVKC
Sbjct: 203 EGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRR 262
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L + +F + K + ++ ++ G A GQ EAL +F R G PD V V+
Sbjct: 263 LPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGV 322
Query: 344 CSHAGLVNEG--LLCF-----------------------------DRMKLEYRIVPTVQH 372
+ LV +G + C+ +RM E R P V
Sbjct: 323 LADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMR-APNVVS 381
Query: 373 YGCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSA 411
+ +V+ +G+ G+ EA+ L + M ++ ++V + +LLSA
Sbjct: 382 WTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSA 423
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 169/360 (46%), Gaps = 28/360 (7%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
L +A A+ +L+ G+Q+HG + K+GF D + N+LI+MY KC +++ A +F M
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++V SW+A++ +G + CL+L GEM P E L + L AC +G G
Sbjct: 67 DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMH 312
HG +R + +V +SL+ +Y K G + +F + T++ M+SG A
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186
Query: 313 GQGKEALSIFSEMLR-EGL-EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE-YRIVPT 369
G G++AL +F EM R EG +PD+ + +L ACS G EG M +
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF 429
G +VD+ + L A+++ + + ++N + W +++ V H E A LF
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLE-RKNVIQWTAVV----VGHAQEGQVTEALELF 301
Query: 430 QINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD 489
+ + W A+ + + S + F+LVE R+V+ + +D
Sbjct: 302 R-------------------RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD 342
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+ ++ +L A +L G HG++ + + ++ +LIDMYVKCG L+ +F
Sbjct: 4 QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PDDVVYVGVLSACSHAGLV 350
M D+ ++++ ++ G HG L + EM R E P++ L AC G
Sbjct: 64 GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEM-RTASEAAPNEYTLSASLKACCVVGDT 122
Query: 351 NEGL----LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
G+ LC E+ +V + +V + + G +G+A + + W
Sbjct: 123 AAGVGIHGLCVRAGYQEHDVVAS-----SLVLVYSKGGRIGDARRVFDGAGLGSGIATWN 177
Query: 407 SLLSA-SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+++S + H + + + H P ++ S + A
Sbjct: 178 AMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKA 219
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/625 (35%), Positives = 325/625 (52%), Gaps = 49/625 (7%)
Query: 23 PELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
P L +L C + ++HA ++ + A L A S G +D
Sbjct: 16 PAGGGALTADRAAALLAGCASASRAAEIHAAAVRASVDQDKAVAFRLQRAYAAS--GRLD 73
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKA 140
A ++ R+ +P A + + I AL L +EM G+ P T A A
Sbjct: 74 LAVALLRRTPDPTAVFYTSAIHAHSSRGLHRAALALLSEMLLSRHGLLPTAHTLSASLPA 133
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM------------------------- 175
C L G +HG+ K+ + +V +L+ M
Sbjct: 134 CG---CLAVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVS 190
Query: 176 -------YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC 228
Y K +++ A +F + +K + W+A++ + +G SE L+LF +M
Sbjct: 191 VTAMLSCYAKMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGV 250
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-----ALNVIVETSLIDMYVKCGC 283
P+E +V LSA LG + G+ H S + N LN V T+L+DMY KCG
Sbjct: 251 -EPDEVSVVLALSAVAQLGTAESGRWLH-SFVANGGRRARVRLNARVGTALVDMYYKCGS 308
Query: 284 LEKGLCLFRMM---ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
LE+ + +FR + D+ + ++ MI+G AMHG+ +EAL F ++ +GL P D+ ++GV
Sbjct: 309 LEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGV 368
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L+ACSH+GLV+EG F M+ EY IVP V+HYGC+VDL+GRAG + EA +L+QSM +
Sbjct: 369 LNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKP 428
Query: 401 NDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRT 460
+ +W SLL A ++H NL +G+ A L + YVLLSNMYA A +W +V ++R+
Sbjct: 429 DAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRS 488
Query: 461 EMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
M + G+ + PG S VEV R+V +FV+ DRSHP IY + ++ + G+ P
Sbjct: 489 MMRASGVQKEPGCSAVEVGRRVVEFVAGDRSHPRSAEIYAKLEEVNSIARARGHVPHTEL 548
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYE 580
VL D+D+ K L HS+KLA+AF LI + I+I +NLR C DCH KL+S
Sbjct: 549 VLHDLDDAAKERALAVHSEKLALAFGLISTPPRTGIKIVKNLRACADCHAVLKLVSEATG 608
Query: 581 REIIVRDRKRFHRFKDGTCSCRDYW 605
R+I+ RDR RFH F DG+CSC DYW
Sbjct: 609 RKIVFRDRNRFHHFVDGSCSCGDYW 633
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/550 (38%), Positives = 308/550 (56%), Gaps = 40/550 (7%)
Query: 96 AFDFNTLIRGFVKEV---EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+F +N +IR V V + + +Y M V PD TFP L + L G +
Sbjct: 23 SFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQR 82
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H + G + D FV+ SL+NMY C + A IF + K + +W++++ A+A GL
Sbjct: 83 THAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGL 142
Query: 213 ------------------WS-------------ECLKLFGEMN----NEKCWRPEESILV 237
WS E L LF EM NE P + +
Sbjct: 143 INHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMS 202
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VLSAC LGAL+ GK H + + +++++ T+LIDMY KCG LE+ +F + K
Sbjct: 203 TVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALGSK 262
Query: 298 CQL-TYSVMISGLAMHGQGKEALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ YS MI LAM+G E +FSEM + P+ V +VG+L AC H GL+N+G
Sbjct: 263 KDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKS 322
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M E+ I P++QHYGC+VDL GR+G++ EA I SMP++ + ++W SLLS S++
Sbjct: 323 YFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 382
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
+++ E A K L +++ + YVLLSN+YA+ RW +V +IR EM KG+ + PG S
Sbjct: 383 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSY 442
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
VEV V++FV D S + IY M+ ++ +L+ GY D +VL D++E +K L
Sbjct: 443 VEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDTKEVLLDLEEKDKEMALS 502
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF L+ G+P+RI +NLR+C DCH K+IS ++ REI+VRD RFH F
Sbjct: 503 YHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFS 562
Query: 596 DGTCSCRDYW 605
DG+CSCRD+W
Sbjct: 563 DGSCSCRDFW 572
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 37/306 (12%)
Query: 48 KKVHAHVLKWGFFWNPFCAS---NLVATCA----------------LSHWGS-------- 80
++ HA +L +G +PF + N+ ++C L W S
Sbjct: 81 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKA 140
Query: 81 --MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-----FERGVEPDNFT 133
+++A +F ++ E ++ LI G+V +++EAL L+ EM E V P+ FT
Sbjct: 141 GLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFT 200
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM- 192
+ AC +L AL++G +H ++ K G E D+ + +LI+MY KC +E A +F +
Sbjct: 201 MSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALG 260
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+K V ++SA+I A GL EC ++F EM P V +L AC H G ++ G
Sbjct: 261 SKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKG 320
Query: 253 KCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLA 310
K + I ++D+Y + G +++ M + L + ++SG
Sbjct: 321 KSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 380
Query: 311 MHGQGK 316
M G K
Sbjct: 381 MLGDIK 386
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/572 (35%), Positives = 342/572 (59%), Gaps = 7/572 (1%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
LK+ ++ + +HAHV+K + + F LV +C L + D A +F ++ +
Sbjct: 55 LKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLV-SCYLKMGPTKD-AYLLFDEMPKKDFV 112
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N+L+ G K + E L ++ +M + ++ + FTF ++ AC +A EG +H
Sbjct: 113 SWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCC 172
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIAAHASNGLWS 214
K+G ++ V N+L+NMYGK VE A +F +M +KS+ SW++I+A A NG+ +
Sbjct: 173 AMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPN 232
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E F +M + P+++ +VS+L AC + + + HG + N+ + T+L
Sbjct: 233 EAFNCF-DMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTL 291
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPD 333
+++Y K G L +F ++ ++ ++ M++G AMHG GKEA+ F ++RE G+EPD
Sbjct: 292 LNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPD 351
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V + +LSACSH+GLV EG F M Y++ P + HY C+VDL+GR G+L +A ELI
Sbjct: 352 HVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELI 411
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
++MP + N VW +LL A +VH N+++G+ AAKNL ++ P +Y++LSNMY+ A W
Sbjct: 412 KNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWN 471
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
D +K+RT M +K L ++ G S +E K+++FV D +HP I++ + ++ +++ G
Sbjct: 472 DASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVG 531
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ + +L DVDE+ K + + HS+K+A+A+ L+ + P+ I +NLR+C DCH K
Sbjct: 532 FVHETESILHDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVK 591
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+S++ +R II+RD KRFH+F G CSC DYW
Sbjct: 592 FVSMVEKRTIIIRDTKRFHQFSGGLCSCGDYW 623
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/563 (37%), Positives = 307/563 (54%), Gaps = 41/563 (7%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+K+H K G F + LV+ G + A + ++ +N+L+ G+
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSM--YGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ F++AL + EM + D T +L A
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPA--------------------------- 250
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N+ E V + +F +M +KS+ SW+ +I + N + E ++L+ M +
Sbjct: 251 VSNT------TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ P+ + SVL AC AL LGK HG + R N+++E +LIDMY KCGCLEK
Sbjct: 305 -FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M + ++++ MIS G+G +A+++FS++ GL PD + +V L+ACSHA
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GL+ EG CF M Y+I P ++H C+VDL+GRAG + EA IQ M ++ N+ VW +
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A +VH + +IG +AA LFQ+ YVLLSN+YA+A RW +V IR M SKGL
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S VEV R ++ F+ DRSHP D IY + + ++K GY PD L DV+E
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQ-----GSPIRIARNLRMCNDCHTYTKLISVIYERE 582
++K L HS+KLAI FAL++ + + IRI +NLR+C DCH KLIS I RE
Sbjct: 604 EDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSRE 663
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
II+RD RFH F+ G CSC DYW
Sbjct: 664 IIIRDTNRFHVFRFGVCSCGDYW 686
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 186/402 (46%), Gaps = 48/402 (11%)
Query: 13 LTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT 72
L + E K P+ + L Q +L T ++ + VH+ ++ + C S+L
Sbjct: 28 LPKLELDQKSPQETVFLLGQ----VLDTYPDIRTLRTVHSRII----LEDLRCNSSLGVK 79
Query: 73 CALSHWGSMDYACS--IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
++ D A + +F +I E N +IR +V + E + ++ M V PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
++TFP + KAC+ + G +IHG KVG LFV N L++MYGKC + A +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+M ++ V SW++++ +A N + + L++ EM + K + + S+L A
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH-DAGTMASLLPA-------- 250
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
+ N + NV MYVK +F M K ++++VMI
Sbjct: 251 ---------VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
+ EA+ ++S M +G EPD V VL AC ++ G ++ + +++P +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK-KLIPNL 344
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
++D+ + G L +A ++ ++M + DVV W +++SA
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENM--KSRDVVSWTAMISA 384
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 178/409 (43%), Gaps = 66/409 (16%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C+ +E K H + ++L+ + + ++ Y +F ++ +
Sbjct: 226 LEVCREMESVKISH----------DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLV 275
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+N +I ++K EA+ LY+ M G EPD + ++ AC AL G +IHG++
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ +L ++N+LI+MY KC +E A +F+ M + V SW+A+I+A+ +G + +
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF ++ + P+ V+ L+AC+H
Sbjct: 396 ALFSKLQDSGLV-PDSIAFVTTLAACSH-------------------------------- 422
Query: 278 YVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
G LE+G F++M D ++T + M+ L G+ KEA +M +EP
Sbjct: 423 ---AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM---SMEP 476
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ-HYGCVVDLMGRAGMLGEALE 391
++ V+ +L AC + GLL D++ +++ P +Y + ++ +AG E
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKL---FQLAPEQSGYYVLLSNIYAKAGRWEEVTN 533
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
+ +++ L + N+E+ I L SH SD +
Sbjct: 534 I--------RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 348/609 (57%), Gaps = 46/609 (7%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPF--CA-SNLVATCALSHWGSMDYACSIFRQI 91
LKTC + + ++H ++K GF + + CA N C WG ++ A +F ++
Sbjct: 530 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC----WG-LEKANQVFHEM 584
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEG 150
P A +N I ++ + ++ + L+ +M ++ + T + +A ++L L G
Sbjct: 585 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMG 644
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+ HG+V + GF+CD++V SLI+MY K + A A+F M +++ +W+++++ ++
Sbjct: 645 KETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFK 704
Query: 211 GLWSECLKLFGEMNNEK------CWR----------------------------PEESIL 236
G++ + L+L +M E W P + +
Sbjct: 705 GMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASI 764
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
+L AC L L GK H IRN +V V T+LIDMY K L+ +FR + +
Sbjct: 765 TCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQN 824
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K +++ MI G A+ G GKEA+S+F+EM + G+ PD + + +LSAC ++GL+ EG
Sbjct: 825 KTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKY 884
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
FD M +YRIVP ++HY C+VDL+GRAG L EA +LI +MP++ + +W +LL + ++H
Sbjct: 885 FDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHK 944
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
NL+ E AAKNLF++ ++ ++Y+L+ N+Y+ RW D+ +R M + G+ +S +
Sbjct: 945 NLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWI 1004
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
++ ++V+ F S ++ HP IY ++Q+ ++K GY PD++ V +++DE EK++ L
Sbjct: 1005 QINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLS 1064
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
H++KLAI + LI + G PIR+ +N R+C+DCH+ K IS++ RE+ +RD RFH F++
Sbjct: 1065 HTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFRE 1124
Query: 597 GTCSCRDYW 605
G CSC D+W
Sbjct: 1125 GKCSCNDFW 1133
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 179/350 (51%), Gaps = 11/350 (3%)
Query: 48 KKVHAHVLKWGFFWNPFCAS-NLVATCALSHWGSMDY--ACSIFRQIDEPGAFDFNTLIR 104
K +HA ++K WNP A+ NL++ S+ G D+ A +F +N+ +
Sbjct: 440 KMMHAQMIKLPQKWNPDAAAKNLIS----SYLGFGDFWSAAMVFYVGLPRNYLKWNSFVE 495
Query: 105 GFVKEV-EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
F L ++ E+ +GV D+ + K C ++ + GM+IHG + K GF+
Sbjct: 496 EFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFD 555
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D++++ +L+N YG+C +E A+ +F +M W+ I + + + ++LF +M
Sbjct: 556 LDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM 615
Query: 224 NNEKCWRPEESILVSVLSAC-THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
+ E + +V VL A + LG L++GK THG ++RN +V V TSLIDMYVK
Sbjct: 616 QFS-FLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNH 674
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
L +F M ++ ++ ++SG + G ++AL + ++M +EG++PD V + G++S
Sbjct: 675 SLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 734
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ G E L F +M+ E ++P C++ +L + E+
Sbjct: 735 GYAMWGCGKEALAFFAQMQQE-GVMPNSASITCLLRACASLSLLQKGKEI 783
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/614 (33%), Positives = 341/614 (55%), Gaps = 16/614 (2%)
Query: 4 TSVLHQSLLLTQPEEPPKGP---ELNLRLKEQECLT------ILKTC---KNLEEFKKVH 51
TS H+++ ++ P P EL+L + T I+ C KNL + +H
Sbjct: 24 TSAAHRAVPISFPSSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIH 83
Query: 52 AHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVE 111
AH+ + + F ++L+ G++ A +F ++ + LI G+ +
Sbjct: 84 AHLSRSCLAGDAFLLNSLIHM--YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYM 141
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
EA+ L +M P+ FTF +L KA G Q+H K ++ D++V ++
Sbjct: 142 PAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSA 201
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L++MY +CE+++ A +F ++ K+ SW+A+IA A L F EM +
Sbjct: 202 LLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNG-FGA 260
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
S+ SA +GAL+ G+ H LI++ L V +++ MY K G + +F
Sbjct: 261 THFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVF 320
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M + +T++ M++ LA +G GKEA++ F E+ + G++ + + ++ VL+ACSH GLV
Sbjct: 321 DRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVK 380
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG FD MK +Y + P + HY VDL+GRAG+L EAL + MP++ VW +LL A
Sbjct: 381 EGKHYFDMMK-DYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 439
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
++H N ++G+ AA ++F+++ VLL N+YA +W D A++R M + G+ + P
Sbjct: 440 CRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEP 499
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
S V++ V+ FV+ D +HP +IY M ++ ++K GY P+ + VL ++E E+
Sbjct: 500 ACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERE 559
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
+LK HS+K+A+AFALI++ G+ IRI +N+R+C DCH+ K +S +++REI+VRD RF
Sbjct: 560 TKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRF 619
Query: 592 HRFKDGTCSCRDYW 605
H F +G+CSC DYW
Sbjct: 620 HHFSEGSCSCGDYW 633
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 327/573 (57%), Gaps = 5/573 (0%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C NL ++ +K+HA + G + + L+ A +D A IF+++
Sbjct: 225 SVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA--RCKCLDDAAKIFQRLP 282
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
++ +I F + F+EA+ Y++M GV P+ +TF ++ ACA + L+ G
Sbjct: 283 RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 342
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + G++ L +L+++Y ++ A ++F Q++ + W+ +I ++ G
Sbjct: 343 VHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGH 402
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L+L+ EM N + I V+SAC LGA + H + + + ++ T
Sbjct: 403 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT 462
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY + G LE +F M+ + L ++ +I+G A HG+ AL ++ EM EG EP
Sbjct: 463 SLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEP 522
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
++ ++ VL ACSHAGL +G F ++ +Y + P + HY C++DL+ RAG L +A EL
Sbjct: 523 SELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEEL 582
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I +MP++ NDV W SLL AS++H +++ AA + +++ P+ YVLLSN++A
Sbjct: 583 INAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNL 642
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+A +R M ++G+ + G S +EVA ++++F D SHP + I+ + ++ ++K
Sbjct: 643 AGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEA 702
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P+ +VL DV E EK L+ HS+KLAIAF LI + G+ +RI LR+C+DCH+
Sbjct: 703 GYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAV 762
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REIIVRD RFH+F+DG CSC DYW
Sbjct: 763 KFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 204/389 (52%), Gaps = 16/389 (4%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C++LE +++H + N F + +V A GS+ A + F I +
Sbjct: 34 LRQCQDLESVRQIHDRI-SGAASANVFLGNEIVR--AYGKCGSVASARAAFDAIARKNDY 90
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +++ + + + AL LY M ++P+ + + ACA ++AL+EG IH +
Sbjct: 91 SWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRI 147
Query: 158 FKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
G + D+ ++NSL+ MY KC +E A +F++M +SV+SW+A+IAA+A +G + E
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEA 207
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++L+ +M+ E P SVLSAC++LG LD G+ H + + L++ ++ +L+
Sbjct: 208 IRLYEDMDVE----PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLT 263
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY +C CL+ +F+ + + +++S MI+ A EA+ +S+M EG+ P+
Sbjct: 264 MYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYT 323
Query: 337 YVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+ VL AC+ G + G D+ + Y+I T+ + +VDL G L EA L
Sbjct: 324 FASVLLACASVGDLRAGRAVHDQILGNGYKI--TLVNGTALVDLYTSYGSLDEARSLFDQ 381
Query: 396 MPIQQNDVVWRSLLSA-SKVHHNLEIGEI 423
+ +++ +W L+ SK H + E+
Sbjct: 382 IE-NRDEGLWTVLIGGYSKQGHRTGVLEL 409
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 206/419 (49%), Gaps = 18/419 (4%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKW-GFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
T+L C K LEE K +H+ + G + ++L+ A GS++ A +F ++
Sbjct: 126 TVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYA--KCGSLEDAKRLFERM 183
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N +I + + FEEA+ LY +M VEP TF ++ AC+ L L +G
Sbjct: 184 SGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGR 240
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+IH + G E DL +QN+L+ MY +C+ ++ A+ IF+++ ++ V SWSA+IAA A
Sbjct: 241 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 300
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L+ E ++ + +M E RP SVL AC +G L G+ H ++ N + ++
Sbjct: 301 LFDEAIEFYSKMQLEGV-RPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNG 359
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
T+L+D+Y G L++ LF + ++ + ++V+I G + G L ++ EM
Sbjct: 360 TALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKV 419
Query: 332 P-DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P ++Y V+SAC+ G + ++ + I V +V++ R G L A
Sbjct: 420 PATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT-SLVNMYSRWGNLESAR 478
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVH--HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
++ M ++ + W +L++ H H L +G ++ PS+ + +YA
Sbjct: 479 QVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKE---MELEGAEPSELTFMVVLYA 533
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/541 (37%), Positives = 316/541 (58%), Gaps = 27/541 (4%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ E + +IRG+V+E EEA L+ M ER V ++ +
Sbjct: 39 GMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERNV----VSWTVML 94
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA--IFKQMDQKS 196
+ + E Q+ F + D+ ++I+ G C + A IF +M Q++
Sbjct: 95 GGLIEDGRVDEARQL----FDMMPVKDVVASTNMID--GLCSEGRLIEAREIFDEMPQRN 148
Query: 197 VASWSAIIAAHASNGLWS-------------ECLKLFGEMNNEKCWRPEESILVSVLSAC 243
V +W+++I+ +G WS E L LF M E RP ++SVLS C
Sbjct: 149 VVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGV-RPSFPSVISVLSVC 207
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
L +LD G+ H L+R+ +++ V + LI MY+KCG L +F + K + ++
Sbjct: 208 GSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWN 267
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+I+G A HG G++AL +F +M + PD++ ++GVLSACS+ G V EGL F+ MK +
Sbjct: 268 SIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSK 327
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y++ P +HY C+VDL+GRAG L EA+ LI++MP++ + +VW +LL A + H NL++ EI
Sbjct: 328 YQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEI 387
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAK L Q+ ++ Y+LLSN+Y+ RW DV ++R M +K L +SPG S +EV +KV+
Sbjct: 388 AAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKVH 447
Query: 484 KFV-SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
F SHP + I + + ++ L+ GY PD S V+ DVDE+EK L+ HS+KLA
Sbjct: 448 IFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKLA 507
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+A+ L+ + +G PIR+ +NLR+C D H+ KLI+ + REII+RD RFH FKDG CSC
Sbjct: 508 VAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSCS 567
Query: 603 D 603
D
Sbjct: 568 D 568
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRP-- 231
Y + ++ A +F +M + + SW+ +++ + NG+ SE K+F +M N W
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMI 63
Query: 232 ---------EESILV-------SVLSACTHLGAL-DLGKCTHG-SLIRNISALNVIVETS 273
EE+ L+ +V+S LG L + G+ L + +V+ T+
Sbjct: 64 RGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTN 123
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK-------------EALS 320
+ID G L + +F M + + ++ MISG G EAL+
Sbjct: 124 MIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALA 183
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+FS M REG+ P + VLS C ++ G
Sbjct: 184 LFSLMQREGVRPSFPSVISVLSVCGSLASLDHG 216
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 327/573 (57%), Gaps = 5/573 (0%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C NL ++ +K+HA + G + + L+ A +D A IF+++
Sbjct: 226 SVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA--RCKCLDDAAKIFQRLP 283
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
++ +I F + F+EA+ Y++M GV P+ +TF ++ ACA + L+ G
Sbjct: 284 RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 343
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + G++ L +L+++Y ++ A ++F Q++ + W+ +I ++ G
Sbjct: 344 VHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGH 403
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L+L+ EM N + I V+SAC LGA + H + + + ++ T
Sbjct: 404 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT 463
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY + G LE +F M+ + L ++ +I+G A HG+ AL ++ EM EG EP
Sbjct: 464 SLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEP 523
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
++ ++ VL ACSHAGL +G F ++ +Y + P + HY C++DL+ RAG L +A EL
Sbjct: 524 SELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEEL 583
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I +MP++ NDV W SLL AS++H +++ AA + +++ P+ YVLLSN++A
Sbjct: 584 INAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNL 643
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+A +R M ++G+ + G S +EVA ++++F D SHP + I+ + ++ ++K
Sbjct: 644 AGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEA 703
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P+ +VL DV E EK L+ HS+KLAIAF LI + G+ +RI LR+C+DCH+
Sbjct: 704 GYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAV 763
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS I REIIVRD RFH+F+DG CSC DYW
Sbjct: 764 KFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 204/390 (52%), Gaps = 17/390 (4%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C++LE +++H + N F + +V A GS+ A F I +
Sbjct: 34 LRQCQDLESVRQIHDRI-SGAASANVFLGNEIVR--AYGKCGSVASARVAFDAIARKNDY 90
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+ +++ + + + AL LY M ++P+ + + ACA ++AL+EG IH +
Sbjct: 91 SWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRI 147
Query: 158 FKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASNGLWSE 215
G + D+ ++NSL+ MY KC +E A +F++M ++SV+SW+A+IAA+A +G + E
Sbjct: 148 SGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEE 207
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
++L+ +M+ E P SVLSAC++LG LD G+ H + + L++ ++ +L+
Sbjct: 208 AIRLYEDMDVE----PSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALL 263
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY +C CL+ +F+ + + +++S MI+ A EA+ +S+M EG+ P+
Sbjct: 264 TMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYY 323
Query: 336 VYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ VL AC+ G + G D+ + Y+I T+ + +VDL G L EA L
Sbjct: 324 TFASVLLACASVGDLRAGRAVHDQILGNGYKI--TLVNGTALVDLYTSYGSLDEARSLFD 381
Query: 395 SMPIQQNDVVWRSLLSA-SKVHHNLEIGEI 423
+ +++ +W L+ SK H + E+
Sbjct: 382 QIE-NRDEGLWTVLIGGYSKQGHRTGVLEL 410
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 205/420 (48%), Gaps = 19/420 (4%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKW-GFFWNPFCASNLVATCALSHWGSMDYACSIF-RQ 90
T+L C + LEE K +H+ + G + ++L+ A GS++ A +F R
Sbjct: 126 TVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYA--KCGSLEDAKRLFERM 183
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+N +I + + FEEA+ LY +M VEP TF ++ AC+ L L +G
Sbjct: 184 SGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG 240
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+IH + G E DL +QN+L+ MY +C+ ++ A+ IF+++ ++ V SWSA+IAA A
Sbjct: 241 RKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAET 300
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
L+ E ++ + +M E RP SVL AC +G L G+ H ++ N + ++
Sbjct: 301 DLFDEAIEFYSKMQLEGV-RPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN 359
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+D+Y G L++ LF + ++ + ++V+I G + G L ++ EM
Sbjct: 360 GTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTK 419
Query: 331 EP-DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
P ++Y V+SAC+ G + ++ + I V +V++ R G L A
Sbjct: 420 VPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT-SLVNMYSRWGNLESA 478
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVH--HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
++ M ++ + W +L++ H H L +G ++ PS+ + +YA
Sbjct: 479 RQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKE---MELEGAEPSELTFMVVLYA 534
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 174/395 (44%), Gaps = 46/395 (11%)
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
+ C L++++ QIH + ++F+ N ++ YGKC V A F + +K+
Sbjct: 34 LRQCQDLESVR---QIHDRISGAA-SANVFLGNEIVRAYGKCGSVASARVAFDAIARKND 89
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW +++ A+A NG + L L+ M+ +P + +VL AC + AL+ GK H
Sbjct: 90 YSWGSMLTAYAQNGHYRAALDLYKRMD----LQPNPVVYTTVLGACASIEALEEGKAIHS 145
Query: 258 SLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQG 315
+ L+VI+E SL+ MY KCG LE LF RM + +++ MI+ A G
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHF 205
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EA+ ++ +M +EP + VLSACS+ GL+++G +I + G
Sbjct: 206 EEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG----------RKIHALISSRGT 252
Query: 376 VVDL---------MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
+DL R L +A ++ Q +P + DVV S + A+ +L I
Sbjct: 253 ELDLSLQNALLTMYARCKCLDDAAKIFQRLP--RRDVVSWSAMIAAFAETDLFDEAIEFY 310
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
+ Q+ P+ Y S + A A V +R A G+ + V V
Sbjct: 311 SKMQLEGVRPNYYTFASVLLACAS----VGDLRAGRAVHDQILGNGYKITLVNGTA--LV 364
Query: 487 SQDRSHPAWDNIYEMIHQME------WQLKFEGYS 515
S+ + D + Q+E W + GYS
Sbjct: 365 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYS 399
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/613 (34%), Positives = 346/613 (56%), Gaps = 32/613 (5%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
+ T E P L+ LK C + T + +H ++ G+ + AS+LV
Sbjct: 49 MRTASEAAPNEYTLSASLKA--CCVVGDTAAGV----GIHGLCVRAGYQEHDVVASSLVL 102
Query: 72 TCALSHWGSMDYACSIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEM--FERGVE 128
S G + A +F G +N ++ G+ +AL ++ EM E +
Sbjct: 103 V--YSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQ 160
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC--DLFVQNSLINMYGKCEKVEFAS 186
PD FTF +L KAC+ L A +EG Q+H + GF + + +L++MY KC ++ A
Sbjct: 161 PDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAM 220
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR----PEESILVSVLSA 242
+F+++++K+V W+A++ HA G +E L+LF + WR P+ +L SV+
Sbjct: 221 QVFERLERKNVIQWTAVVVGHAQEGQVTEALELF-----RRFWRSGARPDSHVLSSVVGV 275
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
++ G+ H I++ + +V S++DMY+KCG ++ +FR M +++
Sbjct: 276 LADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSW 335
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ M++GL HG G+EA+++F EM G+EPD+V Y+ +LSACSHAGLV+E F ++
Sbjct: 336 TTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRR 395
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ + P +HY C+VDL+GRAG L EA +LI++MP++ VW++LLSA +VH ++ +G
Sbjct: 396 DRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGR 455
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A L ++ +P +YV LSN+ A A W + K+R M +GL + G S VEV ++V
Sbjct: 456 EAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEV 515
Query: 483 YKFV---SQDRSHPAWDNIYEMIHQMEWQLKFE-GYSPDISQ-VLRDVDEDEKRERLKGH 537
+ F ++ +HP +I ++ ME +++ + GY+ D ++ L DVDE+ + E L+ H
Sbjct: 516 HFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAH 575
Query: 538 SQKLAIAFALIH-----LSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
S++LA+ L+ G PIR+ +NLR+C DCH + K +S + R ++VRD RFH
Sbjct: 576 SERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFH 635
Query: 593 RFKDGTCSCRDYW 605
RF+ G+CSC+DYW
Sbjct: 636 RFEHGSCSCKDYW 648
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 173/372 (46%), Gaps = 40/372 (10%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPAL 137
G +D AC +F + + + L+ GF++ + L L EM P+ +T A
Sbjct: 6 GELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSAS 65
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS- 196
KAC + G+ IHG + G++ V +SL+ +Y K ++ A +F S
Sbjct: 66 LKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSG 125
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+A+W+A+++ +A G + L +F EM +E +P+E S+L AC+ LGA G
Sbjct: 126 IATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQV 185
Query: 256 HGSLIRN--ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H ++ + +A N I+ +L+DMYVKC L + +F + K + ++ ++ G A G
Sbjct: 186 HAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEG 245
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCF-------------- 357
Q EAL +F R G PD V V+ + LV +G + C+
Sbjct: 246 QVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGN 305
Query: 358 ---------------DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM---PIQ 399
+RM E R P V + +V+ +G+ G+ EA+ L + M ++
Sbjct: 306 SIVDMYLKCGLPDEAERMFREMR-APNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVE 364
Query: 400 QNDVVWRSLLSA 411
++V + +LLSA
Sbjct: 365 PDEVTYLALLSA 376
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 143/319 (44%), Gaps = 28/319 (8%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY KC +++ A +F M ++V SW+A++ +G + CL+L GEM P E
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
L + L AC +G G HG +R + +V +SL+ +Y K G + +F
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 295 ADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLR-EGL-EPDDVVYVGVLSACSHAGLVN 351
+ T++ M+SG A G G++AL +F EM R EG +PD+ + +L ACS G
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 352 EGLLCFDRMKLE-YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
EG M + G +VD+ + L A+++ + + ++N + W +++
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLE-RKNVIQWTAVV- 238
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
V H E A LF+ + W A+ + + S +
Sbjct: 239 ---VGHAQEGQVTEALELFR-------------------RFWRSGARPDSHVLSSVVGVL 276
Query: 471 PGFSLVEVARKVYKFVSQD 489
F+LVE R+V+ + +D
Sbjct: 277 ADFALVEQGRQVHCYGIKD 295
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 326/575 (56%), Gaps = 8/575 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
TIL C + + E ++VH H++K + + + + L+ + + A +F ++
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVL--YNKCDCLGDAREMFDEMP 152
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ + +I + + EAL L+ EM EP++FTF + +C + G Q
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K +E +FV +SL++MY K ++ A +F + ++ V + +AII+ +A GL
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 272
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E LKLF ++ E SVL+A + L AL+ GK H ++R+ V++
Sbjct: 273 DEEALKLFRQLQIEG-MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 331
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LE 331
SLIDMY KCG + +F M ++ ++++ M+ G + HG +E L +F M E ++
Sbjct: 332 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 391
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD + Y+ VLS CSH L + GL F M + I P + HYGCVVDL+GRAG + EA
Sbjct: 392 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 451
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I+ MP +W SLL + +VH ++EIG I + L ++ + +YV+LSN+YA A
Sbjct: 452 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 511
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W D+ IR M K + + PG S VE+ + V+ F + D +HP + + + + ++ + K
Sbjct: 512 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 571
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
+GY PD+S VL DVDE++K + L GHS+KLA+AF LI +G+ IR+ +NLR+C DCH+
Sbjct: 572 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 631
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ K +S +Y R +I+RD+ RFH G CSC DYW
Sbjct: 632 FAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 89 RQIDEPGAFDFNTLIR-GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
RQI + + TL G +KE + A+ FE + + C +A+
Sbjct: 55 RQISFSPSPNLKTLCSSGQLKEALLQMAILGREVKFE--------GYDTILNECVSQRAI 106
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+EG ++H H+ K + ++++ LI +Y KC+ + A +F +M QK+V SW+A+I+A+
Sbjct: 107 REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAY 166
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ G E L LF EM P ++L++C + G+ H I+ +
Sbjct: 167 SQRGFAFEALNLFVEMLRSDT-EPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESH 225
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ V +SL+DMY K G + +F + ++ + + +ISG A G +EAL +F ++
Sbjct: 226 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQI 285
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
EG+ + V Y VL+A S +N G + L V ++D+ + G +
Sbjct: 286 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHV-LRSGQYSYVVLLNSLIDMYSKCGNVC 344
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
A + SMP ++ + W ++L H
Sbjct: 345 YARRIFDSMP-ERTCISWNAMLVGYSKH 371
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT L L K+VH+HVL+ G + ++L+ S G++ YA IF + E
Sbjct: 299 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDM--YSKCGNVCYARRIFDSMPER 356
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQI 153
+N ++ G+ K E L L+ M E V+PD+ T+ A+ C+ Q G++I
Sbjct: 357 TCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEI 416
Query: 154 HGHVF--KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
++ K G E D+ ++++ G+ +VE A K+M + A W +++ +
Sbjct: 417 FYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 472
>gi|356555295|ref|XP_003545969.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Glycine max]
Length = 626
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/559 (36%), Positives = 328/559 (58%), Gaps = 4/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +HA V+K + + F LV +C L+ GS A +F ++ + +N+L+ GF
Sbjct: 71 RVIHARVIKSLDYRDGFIGDQLV-SCYLN-MGSTPDAQKLFDEMPHKDSISWNSLVSGFS 128
Query: 108 KEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ + L ++ M +E E + T ++ ACA +A EG +H K+G E ++
Sbjct: 129 RIGDLGNCLRVFYTMRYEMAFEWNELTLLSVISACAFAKARDEGWCLHCCAVKLGMELEV 188
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
V N+ INMYGK V+ A +F + ++++ SW++++A NG+ +E + F M
Sbjct: 189 KVVNAFINMYGKFGCVDSAFKLFWALPEQNMVSWNSMLAVWTQNGIPNEAVNYFNMMRVN 248
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ P+E+ ++S+L AC L L + HG + N+ + T+L+++Y K G L
Sbjct: 249 GLF-PDEATILSLLQACEKLPLGRLVEAIHGVIFTCGLNENITIATTLLNLYSKLGRLNV 307
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F ++ ++ + M++G AMHG GKEA+ F +REG++PD V + +LSACSH
Sbjct: 308 SHKVFAEISKPDKVALTAMLAGYAMHGHGKEAIEFFKWTVREGMKPDHVTFTHLLSACSH 367
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
+GLV +G F M YR+ P + HY C+VDL+GR GML +A LI+SMP++ N VW
Sbjct: 368 SGLVMDGKYYFQIMSDFYRVQPQLDHYSCMVDLLGRCGMLNDAYRLIKSMPLEPNSGVWG 427
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LL A +V+ N+ +G+ AA+NL +N P +Y++LSN+Y+ A W D +K+R M +K
Sbjct: 428 ALLGACRVYRNINLGKEAAENLIALNPSDPRNYIMLSNIYSAAGLWSDASKVRALMKTKV 487
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
++ G S +E K+++FV D SHP D I+ + ++ ++K G+ + +L DVD
Sbjct: 488 FIRNAGCSFIEHGNKIHRFVVDDYSHPDSDKIHRKLEEIMRKIKEVGFVSETESILHDVD 547
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E+ K + + HS+K+A+AF L+ + P+ I +NLR+C DCH K +S+I +R II+R
Sbjct: 548 EEVKTDMINKHSEKIALAFGLLVSNADMPLVIIKNLRICLDCHNTAKFVSLIEKRTIIIR 607
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D KRFH F DG CSC DYW
Sbjct: 608 DSKRFHHFSDGLCSCADYW 626
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/556 (37%), Positives = 315/556 (56%), Gaps = 34/556 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D AC ++ I + ++I G KE +EA +++EM ER V T+ +
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMV 210
Query: 139 KACAKLQALKEGMQIH----------------GHV-----------FKVGFECDLFVQNS 171
+ + + +I G+V F+V + N+
Sbjct: 211 TGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNA 270
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+I+ G+ ++ A +F M +++ ASW +I H NG E L LF M + RP
Sbjct: 271 MISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV-RP 329
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
L+S+LS C L +L GK H L+R ++V V + L+ MY+KCG L K +F
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLV 350
K + ++ +ISG A HG G+EAL +F EM G +P++V +V LSACS+AG+V
Sbjct: 390 DRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMV 449
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
EGL ++ M+ + + P HY C+VD++GRAG EA+E+I SM ++ + VW SLL
Sbjct: 450 EEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLG 509
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A + H L++ E AK L +I + Y+LLSNMYA RW DVA++R M ++ + +S
Sbjct: 510 ACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKS 569
Query: 471 PGFSLVEVARKVYKFVSQD-RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PG S EV KV+ F SHP ++I +++ +++ L+ GY+PD S L DVDE+E
Sbjct: 570 PGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEE 629
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K LK HS++LA+A+AL+ LS+G PIR+ +NLR+C+DCHT K+IS + EREII+RD
Sbjct: 630 KVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDAN 689
Query: 590 RFHRFKDGTCSCRDYW 605
RFH F++G CSC+DYW
Sbjct: 690 RFHHFRNGECSCKDYW 705
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 145/318 (45%), Gaps = 37/318 (11%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N I + K+ A +F D KS++SW++++A + +N + + KLF EM
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 230 RPEESILV--SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P+ +I+ ++S G +D + + + NV+ T+L+ YV G ++
Sbjct: 75 -PDRNIISWNGLVSGYMKNGEIDEAR----KVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
LF M +K +++++VM+ G G+ +A ++ EM+ + D++ ++
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIP---DKDNIARTSMIHGLCKE 185
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G V+E FD M I T G G+ + +A ++ MP ++ +V W S
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTG-----YGQNNRVDDARKIFDVMP-EKTEVSWTS 239
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHP--SDYVLLSNM-----YARAQRWYDVAKIRT 460
+L + +E A+ LF++ P + ++S + A+A+R +D K R
Sbjct: 240 MLMGYVQNGRIE----DAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 461 EMASKG---LNQSPGFSL 475
+ + + +++ GF L
Sbjct: 296 DASWQTVIKIHERNGFEL 313
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/441 (41%), Positives = 282/441 (63%), Gaps = 1/441 (0%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+ +++ V+ A +F M Q+ +W+A++ + G E L LF EM
Sbjct: 189 DVVCVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQ 248
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E LVSVL+AC +GAL+ G H + ++V + T+L+DMY KCG +
Sbjct: 249 KAGV-AVSEVTLVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVV 307
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ +F M ++ T++ +SGLAM+G G+E L +F M G+EP+ V +V VL C
Sbjct: 308 TMSMEVFETMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGC 367
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
S AGLV EG CFD MK ++++ P ++HYGC+VDL GRAG L +A++ I SMP++ ++ V
Sbjct: 368 SVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGV 427
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W +LL+AS++H+N+++G+ A L +I S + + +VLLSN+YA + W V+K+R M S
Sbjct: 428 WGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKS 487
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
KG+ + PG S +EV KV++F +SHP + +I M+ +M +L+ +GY+ + +VL D
Sbjct: 488 KGVKKMPGCSAIEVDGKVHEFFVGSKSHPRYKDIQTMLAEMSHRLRLQGYAANTKEVLFD 547
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
++E+EK + HS+KLA+AF LI L + + IRI +NLR+C DCH YTKLIS +++REI+
Sbjct: 548 IEEEEKEGAISLHSEKLALAFGLITLPEDTVIRIVKNLRVCKDCHDYTKLISKVFDREIV 607
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
+RDR RFH FK G CSCRDYW
Sbjct: 608 MRDRNRFHHFKHGACSCRDYW 628
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 131/258 (50%), Gaps = 8/258 (3%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
ALS G +D A +F + + +N ++ G+V+ EAL L++EM + GV T
Sbjct: 199 ALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVT 258
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
++ ACA++ AL+ GM +H +V G + + +L++MY KC V + +F+ M
Sbjct: 259 LVSVLTACAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMR 318
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++++ +W++ ++ A NG+ ECL+LF M + P V+VL C+ G ++ G+
Sbjct: 319 ERNIYTWTSALSGLAMNGMGEECLELFKRMESAG-MEPNGVTFVAVLRGCSVAGLVEEGR 377
Query: 254 CTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMM-ADKCQLTYSVMISGLA 310
S+ ++ + +E ++D+Y + G L+ + M + + + +++
Sbjct: 378 ACFDSM-KDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASR 436
Query: 311 MHGQ---GKEALSIFSEM 325
+H GK A+ +E+
Sbjct: 437 IHNNVDLGKHAMHKLTEI 454
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+S VS+ +A +GA+ + I + +V+ T+++ G ++ LF
Sbjct: 162 QSGAVSMYAAVGDVGAVR-------AAFAEIVSPDVVCVTAMLGALSAGGDVDTARELFD 214
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
M + + ++ M++G G+ +EAL +F EM + G+ +V V VL+AC+ G +
Sbjct: 215 GMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTACAQMGALER 274
Query: 353 GL-----LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G+ +C M++ +V +VD+ + G++ ++E+ ++M ++N W S
Sbjct: 275 GMWVHSYVCSRGMRV------SVTLGTALVDMYSKCGVVTMSMEVFETMR-ERNIYTWTS 327
Query: 408 LLSA 411
LS
Sbjct: 328 ALSG 331
>gi|115480819|ref|NP_001064003.1| Os09g0573000 [Oryza sativa Japonica Group]
gi|113632236|dbj|BAF25917.1| Os09g0573000 [Oryza sativa Japonica Group]
Length = 555
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/572 (36%), Positives = 322/572 (56%), Gaps = 39/572 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +HAH+L+ G + A+ +A A S+ YA SI R P F +N+ IR
Sbjct: 9 KALHAHLLRSGALFADPSAAGPLAAAASL--ASLPYALSILRA--HPTTFSYNSAIRALA 64
Query: 108 KEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE---------GMQIHGHV 157
+ A+ LY M P+N+T+P L ACA+L G+ +H +
Sbjct: 65 RGPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVALHASL 124
Query: 158 FKVGFEC-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
F+ G E D F++ SL+++Y + A +F + +
Sbjct: 125 FRRGLESPDRFIRASLLSLYAAAGDLPAARQVFDLSPPNH----------------YVQV 168
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLI 275
L+LF M + L+++LSAC HLGAL + H L S + + T+L+
Sbjct: 169 LRLFRTMRTA-----DHVTLLALLSACAHLGALHTARWAHAYLATTCSFPITTNLATALL 223
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
+MY++CG ++ LF + + T++VMI+GLA++G +AL +F+ M ++PD
Sbjct: 224 NMYMRCGDVQTACSLFHSTPTRHKDVHTWTVMIAGLALNGFSTDALHLFTHMKDHNIQPD 283
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
V VLSAC+HAG+V+EG RM L+Y + PT++HYGC VDL+GRAG+L EAL LI
Sbjct: 284 SVTLTAVLSACTHAGMVDEGKRILRRMPLDYHLQPTIEHYGCTVDLLGRAGLLEEALALI 343
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+++P + + +W +LL A + H N E+G++ A + +++ H +V LSN+YA A +W
Sbjct: 344 RAVPFKADVALWGALLVACRCHRNFEMGQMVAMEILRLDPQHAGAWVFLSNVYAAAGKWD 403
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
V ++R+ M +++ PG S+VE+ VY+F+S D SHP D IY M+ ++ L +G
Sbjct: 404 LVQEVRSSMKQHRIHKPPGSSVVELDGVVYEFLSGDHSHPQSDQIYAMLDEIGKTLSLKG 463
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P V D+DE++K + HS+KLA+AF LI+ +G+ IRI +NLR+C DCH+ K
Sbjct: 464 HKPATKLVTFDIDEEDKEVCISQHSEKLAVAFGLINTRRGAVIRIVKNLRICEDCHSVMK 523
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++S +Y+R I+VRDR RFH FK G+CSC DYW
Sbjct: 524 VVSEVYDRVIVVRDRNRFHHFKSGSCSCLDYW 555
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/570 (35%), Positives = 312/570 (54%), Gaps = 42/570 (7%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++ K + ++HA + + G +P N + + G +DY+ ++F + P
Sbjct: 35 VLIDKSKTISHLLQIHAVLFRHGLDHHPIL--NFKLQRSYASLGRLDYSVALFGRTQNPS 92
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F + +I G + A L++ M E+
Sbjct: 93 VFFWTAIIHGHALRGDVVSAQQLFDTMPEK------------------------------ 122
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
L +++ Y K +++ A +F M+++ W+ +I + NG+ +E
Sbjct: 123 ---------SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNE 173
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L LF M K +P E ++SVLSAC LGAL+ G+ H + N NV V T+L+
Sbjct: 174 ALVLFRRMLKAKA-KPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALV 232
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KCG LE +F + DK + ++ MI G AMHG +EAL +F M R GL P ++
Sbjct: 233 DMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNI 292
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++G+LSAC H+G V EG F++MK EY I P ++HYGC+V+L+GRAG + +A EL+++
Sbjct: 293 TFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKN 352
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
M I+ + V+W +LL A ++H + +GE + L N + Y+LLSN+YA W V
Sbjct: 353 MNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGV 412
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
A++RT M G+ + PG S +EV KV++F++ +HP IY M+ ++ LK GY+
Sbjct: 413 ARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYT 472
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
P VL D+ E EK L+ HS+KLAIAF LI+ G+ I+I +NLR+C DCH TKLI
Sbjct: 473 PQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLI 532
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S I R+I+VRDR RFH F +G+CSC DYW
Sbjct: 533 SKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 30 KEQECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS 86
E L++L C L E + VH+++ G +N + LV S GS++ A
Sbjct: 189 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDM--YSKCGSLEDARL 246
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F +ID+ +N++I G+ +EAL L+ M G+ P N TF + AC
Sbjct: 247 VFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGW 306
Query: 147 LKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAII 204
+ EG I + + G E + ++N+ G+ VE A + K M+ + W ++
Sbjct: 307 VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLL 366
Query: 205 AA---HASNGLWSECLKLFGEMN 224
A H L + ++L + N
Sbjct: 367 GACRLHGKIALGEKIVELLVDQN 389
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/607 (34%), Positives = 330/607 (54%), Gaps = 44/607 (7%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTI-LKTC---KNLEEFKKVHAHVLKWGF 59
S LH+ L+ P+GP + + LK+C K+L ++H+ V K
Sbjct: 98 ASSLHRDALVLFASMRPRGPAC---FPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRL 154
Query: 60 FWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLY 119
N + A + ++ S G + A +F + +N +I GF + F+ A+ ++
Sbjct: 155 DRNVYVAHSAISM--YSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVF 212
Query: 120 NE-MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ + +G PD T + A K
Sbjct: 213 KQFVVLQGSMPDAGTMAGILPAMGN---------------------------------AK 239
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
+ + F +F M K + SW+A++A +A+N + ++LF M ++ P+ L +
Sbjct: 240 PDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEV-EPDSITLAT 298
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
VL C L A +GK H + R N+++E +L+DMY CGCL+ +F +M+ +
Sbjct: 299 VLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARD 358
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
++++ +IS HG G+EA+ +F +ML +GLEPD + +V VL+ACSHAGL+ +G FD
Sbjct: 359 VISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFD 418
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
M Y I+P +HY C+VDL+GRAG + EA + I +M I+ N+ VW +LL A ++H N+
Sbjct: 419 SMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRIHSNM 478
Query: 419 EIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
+IG +AA NLF + YVLLSNMYARA RW DV +R+ M +KG+ + PG S+VE+
Sbjct: 479 DIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVEL 538
Query: 479 ARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHS 538
+V+ F DR HP + IY + ++ +++ GY+P++ L DV+E++K + L HS
Sbjct: 539 GDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHS 598
Query: 539 QKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGT 598
+KLAIAF L++ S G+ IR+ NLR C+DCH KLIS+I REI+++D R H G
Sbjct: 599 EKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGV 658
Query: 599 CSCRDYW 605
CSC DYW
Sbjct: 659 CSCGDYW 665
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 178/418 (42%), Gaps = 49/418 (11%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCA-SNLVATCALSHWGSM 81
+L + L +L C+ +L + HA +L +P A +N+ A + ++
Sbjct: 7 HLPTSGESLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSAL 66
Query: 82 DYACSIFRQIDEPG-----AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE--PDNFTF 134
A ++ G FN LIR +AL L+ M RG PD++T+
Sbjct: 67 PLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTY 126
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
P K+C+ + L G+QIH V K+ + +++V +S I+MY +C + E A +F M
Sbjct: 127 PLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPH 186
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+ V SW+A+IA A GL+ +++F + + P+ + +L A + D+
Sbjct: 187 RDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDI--- 243
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
+R + F M K ++++ M++ A +
Sbjct: 244 ---RFVRRV---------------------------FDNMQFKELISWNAMLAVYANNEF 273
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+A+ +F M ++ +EPD + VL C + G + +K + + P +
Sbjct: 274 HVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRK-NMCPNLLLEN 332
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH-HNLEIGEIAAKNLFQ 430
++D+ G L +A E+ M DV+ W S++SA H H E ++ K L Q
Sbjct: 333 ALMDMYASCGCLKDAREIFDLM--SARDVISWTSIISAYGKHGHGREAVDLFEKMLGQ 388
>gi|297804658|ref|XP_002870213.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316049|gb|EFH46472.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/567 (38%), Positives = 323/567 (56%), Gaps = 13/567 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+HA LK GF N F ++LV + ++ A +F ++ EP + ++I G+
Sbjct: 44 LHALTLKLGFASNTFTVNHLVNSYV--KLKEINTARKVFDEMCEPNVVSWTSVISGYNDM 101
Query: 110 VEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+ + AL ++ EM E R V P+ +TF ++FKAC+ L + G IH + G ++ V
Sbjct: 102 GQPQTALSMFQEMHEDRSVPPNEYTFASVFKACSALAESRIGKNIHARLEVSGLRRNIVV 161
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+SL++MYGKC VE A +F M ++V SW+++I A+A N E ++LF N +
Sbjct: 162 SSSLVDMYGKCNDVEMARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAD 221
Query: 227 KCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
RP + +L SV++A + LG L G+ +HG + R N +V TSL+DMY KCG L
Sbjct: 222 STSDRPNQFMLASVINASSSLGRLQWGQISHGLVTRGGYESNNVVATSLLDMYAKCGSLT 281
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F + ++Y+ MI A HG G+ AL +F EM+ ++P+ V +GVL ACS
Sbjct: 282 CAEKIFFRIRCHSVISYTSMIMAKAKHGLGEAALQLFDEMVAGRIKPNYVTLLGVLHACS 341
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI--QQNDV 403
H+GLVNEGL + M +Y ++P +HY CVVD++GR G + EA +L +++ + +Q +
Sbjct: 342 HSGLVNEGLEFLNSMAEKYGVIPDSRHYTCVVDMLGRFGRVDEAYDLAKTIDVGAEQGAL 401
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W +LLSA ++H +EI A+K L Q N S Y+ LSN YA A W D +R EM
Sbjct: 402 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVAGGWEDSESLRLEMK 461
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY-----SPDI 518
G + S +E VY F + D S I + +E ++K G+
Sbjct: 462 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIKRFLKNLENRMKERGHRGSSSMITS 521
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
S V DVDE+ K E + H ++LA+A+ L+HL GS IRI NLRMC DCH KLIS I
Sbjct: 522 SSVFVDVDEEAKEEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEI 581
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
EREI+VRD RFH FK+G+C+CRD+W
Sbjct: 582 VEREIVVRDVNRFHCFKNGSCTCRDFW 608
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
NE + ++ LV LS T L +L H ++ A N L++ YVK +
Sbjct: 17 NEFFYLKTKAFLVHKLSEPTDLFLTNL---LHALTLKLGFASNTFTVNHLVNSYVKLKEI 73
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSA 343
+F M + ++++ +ISG GQ + ALS+F EM + + P++ + V A
Sbjct: 74 NTARKVFDEMCEPNVVSWTSVISGYNDMGQPQTALSMFQEMHEDRSVPPNEYTFASVFKA 133
Query: 344 CSHAGLVNEGLLCFDRMK---LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM-PIQ 399
CS G R++ L IV + +VD+ G+ + A + SM
Sbjct: 134 CSALAESRIGKNIHARLEVSGLRRNIVVS----SSLVDMYGKCNDVEMARRVFDSMIGYG 189
Query: 400 QNDVVWRSLLSA 411
+N V W S+++A
Sbjct: 190 RNVVSWTSMITA 201
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/575 (34%), Positives = 329/575 (57%), Gaps = 28/575 (4%)
Query: 35 LTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C N L K VH+ +K F ++ L+ S G +D A +F ++
Sbjct: 255 ISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM--YSKCGDLDGALRVFEKM 312
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E + ++I G+ ++ + A+ L +M + GV+ D ++ ACA+ +L G
Sbjct: 313 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+H ++ +LFV N+L++MY KC +E A+++F M K + SW+ ++
Sbjct: 373 DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------- 425
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
GE+ +P+ + +L AC L AL+ GK HG ++RN + + V
Sbjct: 426 ---------GEL------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVA 470
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+L+D+YVKCG L LF M+ K ++++VMI+G MHG G EA++ F+EM G+E
Sbjct: 471 NALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIE 530
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD+V ++ +L ACSH+GL+ +G F MK ++ I P ++HY C+VDL+ R G L +A +
Sbjct: 531 PDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 590
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+++PI + +W +LL +++H++E+ E A+ +F++ + YVLL+N+YA A++
Sbjct: 591 FIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEK 650
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS-QDRSHPAWDNIYEMIHQMEWQLK 510
+V ++R ++ KGL ++PG S +E+ +V FVS + SHP I ++ +M ++K
Sbjct: 651 REEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
EGY P L + DE +K L GHS+KLA+AF L+ L IR+ +NLR+C DCH
Sbjct: 711 EEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHE 770
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S REI++RD RFH FKDG CSCR +W
Sbjct: 771 MAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 160/364 (43%), Gaps = 25/364 (6%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F ++ + +N++I G+V E L +Y +M G++ D T ++ CA
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L G +H K FE + N+L++MY KC ++ A +F++M +++V SW+++
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA + +G + L +M E + + + S+L AC G+LD GK H + N
Sbjct: 324 IAGYTRDGWSDGAIILLQQMEKEGV-KLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
A N+ V +L+DMY KCG +E +F M K ++++ M+
Sbjct: 383 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------- 426
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
L+PD +L AC+ + G + L +VDL +
Sbjct: 427 -----ELKPDSRTMACILPACASLSALERGKEIHGYI-LRNGYSSDRHVANALVDLYVKC 480
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G+LG A L +P D+V +++ A H IA N + P + +S
Sbjct: 481 GVLGLARLLFDMIP--SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 444 NMYA 447
+YA
Sbjct: 539 ILYA 542
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 168/376 (44%), Gaps = 57/376 (15%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R ID D+N I F + + E A+ L M ++ E + T+ ++ + CA L++L
Sbjct: 60 RTIDHQ-VTDYNAKILHFCQLGDLENAMELVC-MCQKS-ELETKTYGSVLQLCAGLKSLT 116
Query: 149 EGMQIHG-------------------------------HVFKVGFECDLFVQNSLINMYG 177
+G ++H VF + ++++ N +++ Y
Sbjct: 117 DGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176
Query: 178 KC--------------------EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K ++ E AS +F ++ + V SW+++I+ + SNGL L
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGL 236
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
++ +M + + ++SVL C + G L LGK H I++ + +L+DM
Sbjct: 237 GIYKQMMYLGI-DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDM 295
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L+ L +F M ++ ++++ MI+G G A+ + +M +EG++ D V
Sbjct: 296 YSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAI 355
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
+L AC+ +G ++ G D +K + + ++D+ + G + A + +M
Sbjct: 356 TSILHACARSGSLDNGKDVHDYIKAN-NMASNLFVCNALMDMYAKCGSMEGANSVFSTMV 414
Query: 398 IQQNDVVWRSLLSASK 413
+ ++ + W +++ K
Sbjct: 415 V-KDIISWNTMVGELK 429
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/583 (36%), Positives = 329/583 (56%), Gaps = 12/583 (2%)
Query: 28 RLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
++ + T++K C NL++ +++H+ VLK GF + L A S G + A
Sbjct: 299 KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALAD--AYSKCGELADA 356
Query: 85 CSIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
+IF + +I G ++ + A+ L++ M E V P+ FT+ A+ KA
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA--S 414
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L QIH V K ++ FV +L+ Y K E A +IFK ++QK V +WSA+
Sbjct: 415 LSILPP--QIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLIRN 262
++ HA G LF +M + +P E + SV+ AC A +D G+ H I+
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGI-KPNEFTISSVIDACACPSAGVDQGRQFHAISIKY 531
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V ++L+ MY + G ++ +F D+ ++++ MISG A HG +A+ F
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETF 591
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
+M G++ D V ++ V+ C+H GLV EG FD M +++I PT++HY C+VDL R
Sbjct: 592 RQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSR 651
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG L E + LI+ MP +VWR+LL A +VH N+E+G+ +A L + H S YVLL
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLL 711
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+YA A +W + ++R M + + + G S +++ KV+ F++ D+SHP D IY+ +
Sbjct: 712 SNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+ +LK +GYSP+ S VL D+ ED+K L HS++LA+AF LI G+P++I +NL
Sbjct: 772 KVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNL 831
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCH K++S+I +REII+RD RFH F G CSC D+W
Sbjct: 832 RVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 171/374 (45%), Gaps = 25/374 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+ +F + + + +L+ G E + L+ M G+ P+ FTF ++
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVL 208
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A A AL G ++H K G +FV NSL+NMY KC VE A ++F M+ + +
Sbjct: 209 SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMV 268
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+ ++A N E L+LF E + + +S +V+ C +L L L + H
Sbjct: 269 SWNTLMAGLQLNECELEALQLFHE-SRATMGKMTQSTYATVIKLCANLKQLALARQLHSC 327
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM-MADKCQLTYSVMISGLAMHGQGKE 317
++++ L V T+L D Y KCG L L +F M + ++++ +ISG +G
Sbjct: 328 VLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPL 387
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSAC-------SHAGLVNEGLLCFDRMKLEYRIVPTV 370
A+ +FS M + + P++ Y +L A HA ++ K Y+ +P V
Sbjct: 388 AVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVI----------KTNYQHIPFV 437
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLF 429
++ + G +AL + + I+Q DVV W ++LS + E G N
Sbjct: 438 G--TALLASYSKFGSTEDALSIFKM--IEQKDVVAWSAMLSCHAQAGDCE-GATYLFNKM 492
Query: 430 QINSHHPSDYVLLS 443
I P+++ + S
Sbjct: 493 AIQGIKPNEFTISS 506
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
F+ RG V EV L ++ GV D+ T + KAC + G Q+H
Sbjct: 72 FDYARRGMVLEV-----LDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCV 126
Query: 159 KVGFE-CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K G + ++ SL++MY KC V +F+ M +K+V +W++++ A + SE +
Sbjct: 127 KCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVM 186
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF M E W P SVLSA GALDLG+ H ++ +V V SL++M
Sbjct: 187 ALFFRMRAEGIW-PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNM 245
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG +E +F M + ++++ +++GL ++ EAL +F E + Y
Sbjct: 246 YAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTY 305
Query: 338 VGVLSACSH---AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V+ C++ L + C +K + + V + D + G L +AL +
Sbjct: 306 ATVIKLCANLKQLALARQLHSCV--LKHGFHLTGNVM--TALADAYSKCGELADALNIFS 361
Query: 395 SMPIQQNDVVWRSLLSA 411
+N V W +++S
Sbjct: 362 MTTGSRNVVSWTAIISG 378
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/576 (35%), Positives = 333/576 (57%), Gaps = 8/576 (1%)
Query: 35 LTILKTC----KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
TI+ +C ++E K+ H ++LK G + + + L+ S +D A I
Sbjct: 131 FTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHM--YSRCFHVDSAMQILDT 188
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ F +N+++ V+ EA + M + V D+ T+ ++ CA+++ L+ G
Sbjct: 189 VPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLG 248
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+QIH + K G D+FV ++LI+ YGKC +V A F + ++V +W+A++ A+ N
Sbjct: 249 LQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQN 308
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G + E L LF +M E RP E +L+AC L AL G HG ++ + ++IV
Sbjct: 309 GHFEETLNLFTKMELEDT-RPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIV 367
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LI+MY K G ++ +F M ++ +T++ MI G + HG GK+AL +F +M+ G
Sbjct: 368 GNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGE 427
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
P+ V ++GVLSAC H LV EG FD++ ++ + P ++HY C+V L+GRAG+L EA
Sbjct: 428 CPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAE 487
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+++ + DVV WR+LL+A +H N +G+ + + Q++ H Y LLSNM+A+A
Sbjct: 488 NFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKA 547
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
++W V KIR M + + + PG S +++ + FVS+ +HP I+E + Q+ +
Sbjct: 548 RKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMI 607
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY+PD+ VL DV++++K L HS+KLA+A+ L+ + PIRI +NLRMC+DCH
Sbjct: 608 KPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCH 667
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS R IIVRD RFH F++G C+C D+W
Sbjct: 668 IAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 169/356 (47%), Gaps = 18/356 (5%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RG 126
NL + C G A +F ++ + ++ L+ G++ + E E L L+ +
Sbjct: 69 NLYSKC-----GQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDS 123
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
P+ + F + CA +KEG Q HG++ K G +V+N+LI+MY +C V+ A
Sbjct: 124 AYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAM 183
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
I + V S+++I++A +G E ++ M +E C + VSVL C +
Sbjct: 184 QILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDE-CVIWDSVTYVSVLGLCAQI 242
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
L LG H L++ +V V ++LID Y KCG + F + D+ + ++ ++
Sbjct: 243 RDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVL 302
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL---- 362
+ +G +E L++F++M E P++ + +L+AC+ + G L R+ +
Sbjct: 303 TAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFK 362
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
+ IV ++++ ++G + + + +M + ++ + W +++ HH L
Sbjct: 363 NHLIVGNA-----LINMYSKSGNIDSSYNVFSNM-MNRDVITWNAMICGYS-HHGL 411
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 5/278 (1%)
Query: 137 LFKACAKLQALKEGMQIHGHVF---KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
L K A ++L+ G IH + + + D+ NSLIN+Y KC + + A +F +M
Sbjct: 29 LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
Q++V SWSA++ + G E L LF + + P E I VLS C G + GK
Sbjct: 89 QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGK 148
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
HG L+++ L+ V+ +LI MY +C ++ + + + +Y+ ++S L G
Sbjct: 149 QCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESG 208
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
EA + M+ E + D V YV VL C+ + GL ++ L+ +V V
Sbjct: 209 CRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQL-LKTGLVFDVFVS 267
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D G+ G + A + + +N V W ++L+A
Sbjct: 268 STLIDTYGKCGEVLNARKQFDGLR-DRNVVAWTAVLTA 304
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/575 (36%), Positives = 324/575 (56%), Gaps = 12/575 (2%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCA-LSHWGSMDYACSIFRQI 91
+++ C L + ++H+ L+ G + + LV A L SM++A +F+ +
Sbjct: 251 SMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTM 310
Query: 92 DEPGAFDFNTLIRGFVKE-VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ LI G+V+ V+ + L+ EM + P++ T+ L KACA L G
Sbjct: 311 PRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSG 370
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
QIH HV K V N+L++MY + +E A F Q+ + ++ S S + +N
Sbjct: 371 RQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNN 430
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
S K+ G + + S+LSA +G L G+ H ++ + +
Sbjct: 431 ASCSS--KIEGMDDGVSTF-----TFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGI 483
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SL+ MY +CG LE F M D ++++ +ISGLA HG K+ALS+F +M+ G+
Sbjct: 484 SNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGV 543
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+P+DV Y+ VLSACSH GLV EG F M+ ++ ++P ++HY C+VDL+ R+G++ EA
Sbjct: 544 KPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEAR 603
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I MP + + +VW++LLSA + + N EIGEIAA ++ + P+ YVLLSN+YA A
Sbjct: 604 QFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAG 663
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W +VA+IR+ M K L++ G S ++V +++F + D SHP +IY + + ++K
Sbjct: 664 LWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIK 723
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL D+ E+ K + L HS+K+A+AF LI S P+RI +NLR+C DCH+
Sbjct: 724 DIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHS 783
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS REII+RD RFHR KDG CSC +YW
Sbjct: 784 AIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 181/403 (44%), Gaps = 61/403 (15%)
Query: 54 VLKWGFFWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
VLK GF+ +++ CAL + G + A +F + E + + LI +V+
Sbjct: 170 VLKTGFW-----GTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+ + L+ M + G EPD ++ ++ AC +L +++ G Q+H ++G D V
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284
Query: 170 NSLINMYGKCE---KVEFASAIFKQMDQKSVASWSAIIAAHASNGLW-SECLKLFGEMNN 225
L++MY K + +E A +FK M + +V SW+A+I+ + +G+ + + LF EM N
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E RP ++L AC +L D G+ H +++ A +V +L+ MY + GC+E
Sbjct: 345 ESI-RPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCME 403
Query: 286 KGLCLFRMMADK-----------------------------CQLTYSVMIS-----GLAM 311
+ F + + T++ ++S GL
Sbjct: 404 EARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLT 463
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
GQ ALS ++ G D + ++S + G + + FD MK ++ ++
Sbjct: 464 KGQKLHALS-----MKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMK-DHNVIS--- 514
Query: 372 HYGCVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSA 411
+ ++ + + G +AL + M ++ NDV + ++LSA
Sbjct: 515 -WTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSA 556
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 7/227 (3%)
Query: 126 GVEPDNFTFPALFKACAKLQALK-EGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVE 183
G+ P+ FT A +AC + + G + G V K GF D+ V +LI+M+ + +
Sbjct: 138 GLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLV 197
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A +F + +++ W+ +I + G S+ ++LF M ++ + P+ + S++SAC
Sbjct: 198 AAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDG-FEPDGYSMSSMISAC 256
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG---CLEKGLCLFRMMADKCQL 300
T LG++ LG+ H +R + V L+DMY K +E +F+ M +
Sbjct: 257 TELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVM 316
Query: 301 TYSVMISGLAMHG-QGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+++ +ISG G Q +++F EML E + P+ + Y +L AC++
Sbjct: 317 SWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACAN 363
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQM-DQ 194
L + A+ L+ G +H + + + D V NSL+ MY KC VE A +F QM
Sbjct: 46 LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC--THLGALDLG 252
+ + SW+A+ + A NG E L+L GEM RP L + AC L L G
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELG-LRPNAFTLCAAARACFPQELFRLAGG 164
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
L +V V +LIDM+ + G L +F + ++ + ++++I+
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G + + +F ML +G EPD ++SAC+ G V G + L +V
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQ-LHSVALRLGLVSDSCV 283
Query: 373 YGCVVDLMGRAGM---LGEALELIQSMPIQQNDVVWRSLLSA 411
+VD+ + M + A ++ ++MP + N + W +L+S
Sbjct: 284 SCGLVDMYAKLKMERSMEHARKVFKTMP-RHNVMSWTALISG 324
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 341/613 (55%), Gaps = 73/613 (11%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F WN + A S G+++ ++F Q+ A +NT+I GF +AL
Sbjct: 90 FSWNAMLS-------AYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEF 142
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ M E G E ++T ++ AC++L +K G QIHG + +FV N+L NMY K
Sbjct: 143 FVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAK 202
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN-------------- 224
C ++ A +F +M K+V SW+++I+ + NG C KLF EM
Sbjct: 203 CGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNI 262
Query: 225 -----------------------NEKCW-----------RPEESILV------------- 237
++ CW + E+++L+
Sbjct: 263 LSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDN 322
Query: 238 ----SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
SV+S+C L +L G+ HG + +++V ++L+DMY KCG +F+
Sbjct: 323 FTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKR 382
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + ++++ MI G A +G+ EAL+++ EML E L+PD++ +VGVLSAC HAGLV G
Sbjct: 383 MLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERG 442
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
F + + + PT HY C+++L+GRAG + +A++LI+SM + N ++W +LLS +
Sbjct: 443 QGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCR 502
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
++ ++ GE+AA++LF+++ H+ Y++LSN+YA RW DVA +R+ M + + + +
Sbjct: 503 INCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAY 562
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S +E+ +V+KFV++DR+H + IYE ++++ +L+ G++PD + VL DV E+EK +
Sbjct: 563 SWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDS 622
Query: 534 LKGHSQKLAIAFALIHLSQG-SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
+ HS+KLA+AF LI G +PIRI +N+R+C DCH + K +S I R II+RD RFH
Sbjct: 623 ICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFH 682
Query: 593 RFKDGTCSCRDYW 605
F +G CSC+D W
Sbjct: 683 HFIEGRCSCKDSW 695
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 118/236 (50%), Gaps = 6/236 (2%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+F N++++ Y K VE A+F QM S++ +IA + NG S+ L+ F M
Sbjct: 88 DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRM- 146
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E+ + + VSVL AC+ L + GK HG ++ +V V +L +MY KCG L
Sbjct: 147 QEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGAL 206
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++ LF M +K ++++ MISG +GQ + +F EM GL PD V +LSA
Sbjct: 207 DQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAY 266
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
G ++E F +K + ++ T GC + G +AL L + M ++
Sbjct: 267 FQCGYIDEACKTFREIKEKDKVCWTTMMVGC-----AQNGKEEDALLLFREMLLEN 317
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 15/188 (7%)
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
++P ++ L + L HL A L +S +V +++ Y K G +E
Sbjct: 53 YQPTDTFLQNRL---LHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLR 109
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M+ ++Y+ +I+G + +G +AL F M EG E D +V VL ACS
Sbjct: 110 AVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLL 169
Query: 349 LVNEGLLCFDRMKLEYRIVPT-----VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
+ G ++ RIV T V + + ++ + G L +A L M + +N V
Sbjct: 170 DIKRG------KQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRM-VNKNVV 222
Query: 404 VWRSLLSA 411
W S++S
Sbjct: 223 SWNSMISG 230
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 307/545 (56%), Gaps = 43/545 (7%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM-------- 151
N+L+R + A + ++ + PDN++F L +A L A
Sbjct: 166 NSLLRALARGRRPHLAFGAFRDL---PLAPDNYSFTFLVRAATALAAAAASALDAALIAG 222
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKV----------------------------- 182
+H + G D VQ+ ++MY V
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 282
Query: 183 --EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+ A +F M Q+ +W+A+IA + G E L+LF EM + E + LVS L
Sbjct: 283 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT-LVSAL 341
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
+AC LGAL+ GK H L+V + T+LIDMY KCG + + +F M ++
Sbjct: 342 TACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVY 401
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
T++ +SGLAM+G G++ L++F M G+EP+ V +V VL CS AGLV+EG CFD M
Sbjct: 402 TWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 461
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
K + I P ++HYGC+VDL GRAG L +A+ I MP++ ++ VW +LL+AS++H N+E+
Sbjct: 462 KSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVEL 521
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
G+ A L I S + + +VLLSN+YA +Q W V+ +R M +KG+ + PG S +EV
Sbjct: 522 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 581
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
KV++F ++HP I M+ +M +L+ +GY + +VL D++E++K + + HS+K
Sbjct: 582 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEK 641
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF L+ L + IRI +NLR+C DCH YTK+IS ++ REI++RDR RFH FKDG CS
Sbjct: 642 LAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACS 701
Query: 601 CRDYW 605
C+DYW
Sbjct: 702 CKDYW 706
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
C + +V AL+ G D A +F + + +N +I G+V EAL L++EM
Sbjct: 270 CVTAMVG--ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
G T + ACA+L AL+ G +H G + + +LI+MY KC V
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F M +++V +W++ ++ A NG+ +CL LF M + P V VL C+
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGV-EPNGVTFVVVLRGCS 446
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMM 294
G +D G+ S+ N ++ +E ++D+Y + G L+ + M
Sbjct: 447 MAGLVDEGRACFDSMKSN-HGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGM 497
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 307/545 (56%), Gaps = 43/545 (7%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM-------- 151
N+L+R + A + ++ + PDN++F L +A L A
Sbjct: 159 NSLLRALARGRRPHLAFGAFRDL---PLAPDNYSFTFLVRAATALAAAAASALDAALIAG 215
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKV----------------------------- 182
+H + G D VQ+ ++MY V
Sbjct: 216 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 275
Query: 183 --EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+ A +F M Q+ +W+A+IA + G E L+LF EM + E + LVS L
Sbjct: 276 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT-LVSAL 334
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
+AC LGAL+ GK H L+V + T+LIDMY KCG + + +F M ++
Sbjct: 335 TACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVY 394
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
T++ +SGLAM+G G++ L++F M G+EP+ V +V VL CS AGLV+EG CFD M
Sbjct: 395 TWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 454
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
K + I P ++HYGC+VDL GRAG L +A+ I MP++ ++ VW +LL+AS++H N+E+
Sbjct: 455 KSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVEL 514
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
G+ A L I S + + +VLLSN+YA +Q W V+ +R M +KG+ + PG S +EV
Sbjct: 515 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 574
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
KV++F ++HP I M+ +M +L+ +GY + +VL D++E++K + + HS+K
Sbjct: 575 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEK 634
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF L+ L + IRI +NLR+C DCH YTK+IS ++ REI++RDR RFH FKDG CS
Sbjct: 635 LAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACS 694
Query: 601 CRDYW 605
C+DYW
Sbjct: 695 CKDYW 699
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
C + +V AL+ G D A +F + + +N +I G+V EAL L++EM
Sbjct: 263 CVTAMVG--ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 320
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
G T + ACA+L AL+ G +H G + + +LI+MY KC V
Sbjct: 321 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 380
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F M +++V +W++ ++ A NG+ +CL LF M + P V VL C+
Sbjct: 381 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGV-EPNGVTFVVVLRGCS 439
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMM 294
G +D G+ S+ N ++ +E ++D+Y + G L+ + M
Sbjct: 440 MAGLVDEGRACFDSMKSN-HGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGM 490
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/577 (35%), Positives = 331/577 (57%), Gaps = 10/577 (1%)
Query: 35 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
L+IL C +NL+ K V + + F + F + L+ A S + A +F ++
Sbjct: 115 LSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCR--SPENAAQVFGRM 172
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ ++ +I F EAL + M + G+ P+ TF +L L+E
Sbjct: 173 KQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELS 232
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCE--KVEFASAIFKQMDQKSVASWSAIIAAHAS 209
+IH + + G + + N+L+N+YG+CE +++ A I ++MD++ + +W+ +I +
Sbjct: 233 RIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTL 292
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
+G E L+ + + E P + + +SVL+ACT +L GK H + + +V
Sbjct: 293 HGRSREALETYQRLQLEAI--PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDV 350
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
IV+ +L +MY KCG +E +F M + ++++ M+ A HG+ +E L + +M +E
Sbjct: 351 IVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQE 410
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++ + + +V VLS+CSHAGL+ EG F + + I +HYGC+VDL+GRAG L E
Sbjct: 411 GVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQE 470
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A + I MP + V W SLL A +VH +L+ G++AA+ L +++ + S V+LSN+Y+
Sbjct: 471 AEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSE 530
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
W + AK+R MAS+ + + PG S ++V KV++F +D SHP IY+ + ++ +
Sbjct: 531 RGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFA 590
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
++ GY PD VL DVDE++K L HS+KLAIAF LI + S + I +NLR+C DC
Sbjct: 591 MREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDC 650
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT TK IS I REI+VRD RFH F+DG+CSC+DYW
Sbjct: 651 HTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 176/374 (47%), Gaps = 7/374 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L + K +H+ V + + F + LV T + GS+ A +F + +N++I
Sbjct: 26 LRKGKFIHSCVRESEHSLDVFVNTALVNT--YTKCGSLTDARKVFDGMPCRSVGTWNSMI 83
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
+ EA F++ M G D TF ++ AC + L+ G + + + FE
Sbjct: 84 SAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFE 143
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV +LI MY +C E A+ +F +M QK++ +WSAII A A +G E L+ F M
Sbjct: 144 LDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMM 203
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC-- 281
E P +S+L+ T L+ H + + + +L+++Y +C
Sbjct: 204 QQEGIL-PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCET 262
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G L+ + + M ++ ++V+I+G +HG+ +EAL + + E + D V ++ VL
Sbjct: 263 GELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVL 322
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+AC+ + + EG + +E + V + ++ + G + A + SMPI ++
Sbjct: 323 NACTSSTSLAEGKMIHSN-AVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI-RS 380
Query: 402 DVVWRSLLSASKVH 415
V W +L A H
Sbjct: 381 AVSWNGMLQAYAQH 394
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 11/299 (3%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M GV+ + TF + + AL++G IH V + D+FV +L+N Y KC
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+ A +F M +SV +W+++I+A++ + E +F M +E R + +S+L
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEG-ERCDRVTFLSILD 119
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
AC + L GK S+ L++ V T+LI MY +C E +F M K +T
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+S +I+ A HG EAL F M +EG+ P+ V ++ +L+ + GL R+
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT----TPSGLEELSRIH 235
Query: 362 L---EYRIVPTVQHYGCVVDLMGR--AGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L E+ + T +V++ GR G L A ++Q M QQ W L++ +H
Sbjct: 236 LLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQ-ITAWNVLINGYTLH 293
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/441 (42%), Positives = 278/441 (63%), Gaps = 1/441 (0%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+L V ++I+ Y + +VE A IF QM++K + WSA+I+ +A + E L LF EM
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+P++ ++SV+SAC LG LD K H + +N + V +LIDMY KCG L
Sbjct: 73 VFGI-KPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDMYAKCGNL 131
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F M + ++++ MI+ A+HG AL F +M E ++P+ V +VGVL AC
Sbjct: 132 GAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYAC 191
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
SHAGLV EG F M E+ I P +HYGC+VDL GRA +L +ALEL+++MP+ N V+
Sbjct: 192 SHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVI 251
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W SL++A ++H E+GE AAK + ++ H V LSN+YA+ +RW DV ++R M
Sbjct: 252 WGSLMAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQ 311
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+G+++ G S +E+ +VY+FV D+ H D IYE + ++ +LK GY+P+ VL D
Sbjct: 312 RGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKELKLVGYTPNTRSVLVD 371
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
V+E+ K+E + HS+KLA+ + L+ +GS IRI +NLR+C DCHT+ KL+S +Y EII
Sbjct: 372 VEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCHTFIKLVSKVYGMEII 431
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRDR RFH +K G CSC DYW
Sbjct: 432 VRDRTRFHHYKAGVCSCNDYW 452
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 15/283 (5%)
Query: 60 FWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEA 115
+ + NLV A+ S G ++ A IF Q++E ++ +I G+ + + +EA
Sbjct: 5 LFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEA 64
Query: 116 LFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINM 175
L L++EM G++PD T ++ ACA+L L IH +V K G L V N+LI+M
Sbjct: 65 LNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNALIDM 124
Query: 176 YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
Y KC + A +F++M ++V SW+++I A A +G S LK F +M +E +P
Sbjct: 125 YAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENI-KPNGVT 183
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIR--NISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
V VL AC+H G ++ G+ T S+ NI+ + ++D++ + L L L
Sbjct: 184 FVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHY-GCMVDLFGRANLLRDALELVET 242
Query: 294 MADKCQLTYSVMISGLAMHG---QGKEALSIFSEMLREGLEPD 333
M L +V+I G M G+ L F+ LEPD
Sbjct: 243 MP----LAPNVVIWGSLMAACQIHGENELGEFAAKQVLELEPD 281
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 19/197 (9%)
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L IS+ N++V T++I Y + G +E +F M +K + +S MISG A + +EA
Sbjct: 5 LFTKISSRNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEA 64
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG---- 374
L++FSEM G++PD V + V+SAC+ G+ DR K + V G
Sbjct: 65 LNLFSEMQVFGIKPDQVTILSVISACARLGV-------LDRAKWIHMYVDKNGLGGALPV 117
Query: 375 --CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQIN 432
++D+ + G LG A + + M +N + W S+++A +H + A K +Q+
Sbjct: 118 NNALIDMYAKCGNLGAARGVFEKMQ-SRNVISWTSMINAFAIHGD---ASNALKFFYQMK 173
Query: 433 SHH--PSDYVLLSNMYA 447
+ P+ + +YA
Sbjct: 174 DENIKPNGVTFVGVLYA 190
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/637 (35%), Positives = 352/637 (55%), Gaps = 48/637 (7%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWN- 62
LH+S+ L + E L L +++ C + +++H+H+L +
Sbjct: 44 LHKSIQLLESRE--------LELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQ 95
Query: 63 -PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNE 121
PF A+ L+ G + YA +F + + + F EAL +
Sbjct: 96 PPFLANLLIEM--YGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRR 153
Query: 122 MFERGVEPDNFTFPALFKACAKLQA--LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
M++ G PD TF + A A++ A + +G +IH + G ++ V ++I+MYGKC
Sbjct: 154 MYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKC 213
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK--CWR------- 230
+++ A A F+++ K+ +W+A++ + +G E L+LF EM++ CW
Sbjct: 214 GRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYA 273
Query: 231 ----------------------PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
P++ V+V+ C L AL G+ H + N+
Sbjct: 274 QHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANL 333
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+V +L+ MY KCGCL++ L +F M K +++++ +IS A HG +AL ++ EM +
Sbjct: 334 LVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQ 393
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++P +V +VG+LSACSH GLV +GL F RM+ ++RI P+V H+GC++DL+GR G L E
Sbjct: 394 GVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAE 453
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A +++SMPIQ N V W SLL A K H +L+ G AA + YVLLSN+YA
Sbjct: 454 AELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAA 513
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A RW DV KIR MA++G+ +SPG S +E+ V++FVS D SHP + IY + +M +
Sbjct: 514 AGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEE 573
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+K GY PD S V D++E+EK + L HS+KLAI + + + S +RI +NLR+C DC
Sbjct: 574 MKGLGYVPDTSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDC 633
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
HT TK +S I R+I+VRD RFH F++G+CSCRDYW
Sbjct: 634 HTATKFMSRITGRKIVVRDAARFHLFENGSCSCRDYW 670
>gi|356570245|ref|XP_003553300.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g26782, mitochondrial-like [Glycine max]
Length = 555
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/530 (39%), Positives = 324/530 (61%), Gaps = 20/530 (3%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF---------ERGVEPDNFTFPAL 137
+F +I + + ++I G V+ +A+ ++ E+ E GV D+ +
Sbjct: 35 LFDEIPDRSVVSWTSIIAGCVQNDRARDAVRVFKELLVEESGSVESEDGVFVDSVLLGCV 94
Query: 138 FKACAKL--QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
A +KL + + EG +HG V K GFE + V N+L++ Y K ++ A +F M++
Sbjct: 95 VSAFSKLGWRGVTEG--VHGLVIKRGFERCVGVGNTLMDAYAKFGEMGVAK-VFDGMNES 151
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
W+++IA +A NGL +E +FG+M +R I+ LS GAL LGKC
Sbjct: 152 DHYFWNSVIAEYAQNGLSAEAFSVFGDMVKSGNFRYNAVIMDXGLS-----GALQLGKCI 206
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H +I+ +V V TS++D+Y KC +E F M K +++ M++G MHG+
Sbjct: 207 HHQVIKMDLEDSVFVGTSIVDIYCKCERVEMARKAFDCMKVKNVKSWTAMVAGYGMHGRA 266
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KEA+ IF +M+R G++P+ + +V VL+ACSHAG++ EG F+RMK E+ + P ++HY C
Sbjct: 267 KEAMEIFYKMIRSGVKPNYITFVSVLAACSHAGMLKEGXHWFNRMKCEFIVEPGIEHYLC 326
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+GRAG L LI+ M + + ++W SLL A ++H N+E+GEI+A+ LF+++ +
Sbjct: 327 MVDLLGRAGYL-XCYGLIKEMNAKPDFIIWGSLLGACRIHKNVELGEISARKLFELDXSN 385
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVLLSN+YA A RW +V ++R M S+GL ++PGFS+VE+ +++ + D+ HP
Sbjct: 386 CGYYVLLSNIYADAGRWDEVERMRILMKSRGLLKAPGFSIVELKGRIHVLLVGDKEHPQH 445
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ IYE + + +L+ GY P+ + VL DVDE+EK L+ HS+KLA+AF +++ GS
Sbjct: 446 EKIYEYLDKXNVKLQELGYMPNXNMVLHDVDEEEKGMVLRVHSEKLAVAFGIMNSVPGSI 505
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I I +NLR+C DC+ KLI + REI+VRD KRFH FK+G+CSC DYW
Sbjct: 506 IHIIKNLRICGDCNVVIKLIFKVVNREIVVRDSKRFHHFKEGSCSCGDYW 555
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/578 (35%), Positives = 326/578 (56%), Gaps = 11/578 (1%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR--- 89
T+L C + + E + H + K+G ++ F S+LV S +D A +
Sbjct: 126 TVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHM--YSKCFHVDLALQVLESEH 183
Query: 90 -QID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
ID + AF +N+++ V+ EA+ + M + GV D+ T+ ++ C +++ L
Sbjct: 184 GNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDL 243
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G+Q+H + K G D+FV + L++M+GKC V A +F + ++V W++++ A+
Sbjct: 244 GLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAY 303
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
NG + E L L M+ E E + V +L+A + AL G H + +
Sbjct: 304 LQNGEFEETLNLLSCMDREGTMSNEFTFAV-LLNAFAGMAALRHGDLLHARVEKLGIKNR 362
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
VIV +LI+MY KCGC++ +F M ++ +T++ MI G + HG GK+AL +F +ML
Sbjct: 363 VIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLS 422
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
G P+ V +VGVLSAC+H LVNEG +++ +++ P ++HY CVV ++ RAGML
Sbjct: 423 AGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLE 482
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA +++ ++ + V WR LL+A +H N +G A+ + Q++ Y LLSNMYA
Sbjct: 483 EAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYA 542
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+A+ W V IR M + + + PG S +E+ V+ F S +HP IY + +
Sbjct: 543 KARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLE 602
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
+K GY P+I VL DV++++K L HS+KLAIA+ L+ + +PIR+ +NLR+C D
Sbjct: 603 MIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICED 662
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CHT KLIS + R IIVRD RFH F+DGTC+C D+W
Sbjct: 663 CHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 164/338 (48%), Gaps = 16/338 (4%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F ++ +N L+ G++ E E + L+ M +P+ + F + ACA
Sbjct: 77 LFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGR 136
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK----QMDQKSVA-SWS 201
+ EGMQ HG +FK G FV++SL++MY KC V+ A + + +D + A ++
Sbjct: 137 VFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYN 196
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEK-CWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+++ A +G E +++ G M +E W + VSV+ C + L LG H L+
Sbjct: 197 SVLNALVESGRLGEAVEVLGRMVDEGVVW--DSVTYVSVMGLCGQIRDLGLGLQVHAQLL 254
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ +V V + L+DM+ KCG + +F + ++ + ++ +++ +G+ +E L+
Sbjct: 255 KGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLN 314
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK---LEYRIVPTVQHYGCVV 377
+ S M REG ++ + +L+A + + G L R++ ++ R++ ++
Sbjct: 315 LLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVG----NALI 370
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ + G + + ++ M ++ + W +++ H
Sbjct: 371 NMYSKCGCIDSSYDVFFDMR-NRDIITWNAMICGYSQH 407
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 249 LDLGKCTHGSL-IRNISA-------LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
L+ GK H L IRN S+ N+I SLI++YVKC L LF M+ + +
Sbjct: 28 LNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVV 87
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+Y+V++ G G+ E + +F M+ +P++ V+ VLSAC+H+G V EG+ C
Sbjct: 88 SYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQC 143
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/531 (38%), Positives = 317/531 (59%), Gaps = 8/531 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV---EPDNFTFP 135
GS+ YA +F + ++ LI GFV +A L+ M +G+ P +
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA-- 344
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ +ACA L L+ G Q+H + K G DL NSL++MY K ++ A A+F +M K
Sbjct: 345 SALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK 404
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKC 254
S+SA+++ + NG E +F +M + C P+ + +VS++ AC+HL AL G+C
Sbjct: 405 DTVSYSALVSGYVQNGRAEEAFLVFKKM--QACNVEPDAATMVSLIPACSHLAALQHGRC 462
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
+HGS+I A + +LIDMY KCG ++ +F MM + ++++ MI+G +HG
Sbjct: 463 SHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
GKEA ++F EM G PD V ++ +LSACSH+GLV EG F M+ Y + P ++HY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI 582
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
C+VDL+ R G L EA E IQSMP++ + VW +LL A +V+ N+++G+ ++ + ++
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
++VLLSN+Y+ A R+ + A++R +G +SPG S +E+ ++ FV D+SHP
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
IY + + +K GY PD S VL+D++E+EK + L HS+KLAIA+ ++ LS+
Sbjct: 703 SPEIYRELDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDK 762
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I + +NLR+C DCHT K IS++ R IIVRD RFH FK+G CSC D+W
Sbjct: 763 TIFVTKNLRVCGDCHTVIKHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 38/358 (10%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKE--VEFEEALFLYNEMFERGVEPDNFTFPA 136
G + A +F QI P +N LIR + + L LY M V P+N+TFP
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
KAC+ L G IH H G + DLFV +L++MY KC + A+ IF M +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNE-KCWRPEESILVSVLSACTHLGALDLGKCT 255
+ +W+A++A +A +G++ + M + RP S LV++L GAL G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 256 HGSLIRNISALN----------VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
H IR N V++ T+L+DMY KCG L +F M + ++T+S +
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 306 ISGLAMHGQGKEALSIFSEMLREG---LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
I G + + +A +F ML +G L P + L AC+ D +++
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACA----------SLDHLRM 358
Query: 363 EYRIVPTVQHYGCVVDLM---------GRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++ + G DL +AG++ +A+ L M + ++ V + +L+S
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSALVSG 415
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 350/617 (56%), Gaps = 15/617 (2%)
Query: 1 MTRTSVLHQSLL-----LTQPEEPPKGPELNLRLKEQECLTI---LKTCKNLEEF---KK 49
+ R SV + +++ L EE K NL + + LT+ L C +L + K
Sbjct: 269 VVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKY 328
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
++ ++L+ GF + L+ A G M A +F ++ +N++I G+++
Sbjct: 329 IYNYMLRAGFVLESTVKNILIDVYA--KCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+ EA+ L+ M + D+ T+ L +L LK G +H + K G DL V
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVS 446
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N+LI+MY KC +V + IF M +W+ +I+A G ++ L++ +M K
Sbjct: 447 NALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVV 506
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P+ + + L C L A LGK H L+R + + +LI+MY KCGCLE
Sbjct: 507 -PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFR 565
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F M+ + +T++ MI M+G+G++AL F +M + G+ PD VV++ ++ ACSH+GL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGL 625
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V +GL CF++MK Y+I P ++HY CVVDL+ R+ + +A E IQ+MPI+ + +W S+L
Sbjct: 626 VEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVL 685
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
A + ++E E ++ + ++N P +L SN YA ++W V+ IR + K + +
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKK 745
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
+PG+S +E+ +KV+ F S D S P + I++ + + + EGY PD +V ++++E+E
Sbjct: 746 NPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEE 805
Query: 530 KRERLK-GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
++ RL GHS++LAIAF L++ G+P+++ +NLR+C+DCH TKLIS I REI+VRD
Sbjct: 806 EKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDA 865
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH FKDG CSC+D W
Sbjct: 866 NRFHLFKDGICSCKDRW 882
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 198/377 (52%), Gaps = 11/377 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP-GA 96
L + NL E +++HA V+ G + F + L+ SH+ + + S+FR++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDK--YSHFRAPASSLSVFRRVSPAKNV 71
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+ +N++IR F K F +AL Y ++ E V PD +TFP++ KACA L + G ++
Sbjct: 72 YIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQ 131
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ ++GFE DL+V N+L++MY + + A +F +M + + SW+++I+ ++S+G + E
Sbjct: 132 ILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 217 LKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+++ E+ N W P+ + SVL A +L + G+ HG +++ +V L+
Sbjct: 192 LEIYHELRNS--WIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLL 249
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY+K +F M + +TY+ MI G +E++ +F E L + +PD +
Sbjct: 250 AMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDIL 308
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
VL AC H ++ ++ M + + + TV++ ++D+ + G + A ++
Sbjct: 309 TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKN--ILIDVYAKCGDMITARDVFN 366
Query: 395 SMPIQQNDVVWRSLLSA 411
SM ++ V W S++S
Sbjct: 367 SMEC-KDTVSWNSIISG 382
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 2/216 (0%)
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSV 197
+A + L E +IH V +G + F LI+ Y + ++F+++ K+V
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNV 71
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
W++II A + NG + + L+ +G++ K P++ SV+ AC L ++G +
Sbjct: 72 YIWNSIIRAFSKNGWFPKALEFYGKLRESKV-SPDKYTFPSVIKACAGLFDAEMGDLVYK 130
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
++ ++ V +L+DMY + G L + +F M + ++++ +ISG + HG +E
Sbjct: 131 QILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
AL I+ E+ + PD VL A ++ +V +G
Sbjct: 191 ALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQG 226
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 315/560 (56%), Gaps = 35/560 (6%)
Query: 79 GSMDYACSIFRQIDEPGAF-DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
G D + + +DE +N +I G+V ++EAL + M G+E D FT+P++
Sbjct: 233 GCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSV 292
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
+ACA + L+ G Q+H +V + + NSL+ +Y KC K A AIF++M K +
Sbjct: 293 IRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDL 351
Query: 198 ASWSAIIAAHAS-------------------------------NGLWSECLKLFGEMNNE 226
SW+A+++ + S NG E LKLF M E
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ P + + +C LGA G+ H L++ ++ +LI MY KCG +E+
Sbjct: 412 G-FEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+FR M ++++ +I+ L HG G EA+ ++ EML++G+ PD + ++ VL+ACSH
Sbjct: 471 AQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSH 530
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
AGLV++G F+ M+ YRI P HY ++DL+ R+G EA +I+S+P + +W
Sbjct: 531 AGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWE 590
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LLS +VH N+E+G IAA LF + H Y+LLSNMYA +W +VA++R M +G
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRG 650
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + S +E+ +V+ F+ D SHP + +Y+ + + +++ GY PD S VL DV+
Sbjct: 651 VKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVE 710
Query: 527 ED-EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
D K + L HS+K+A+AF L+ L G+ IRI +NLR C DCH + + +S + +R+II+
Sbjct: 711 SDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIIL 770
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RDRKRFH F++G CSC ++W
Sbjct: 771 RDRKRFHHFRNGECSCGNFW 790
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 206/499 (41%), Gaps = 112/499 (22%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
NLRL CL + +T +L+ + VH +++ +GF + + L+ S +DYA
Sbjct: 18 NLRL----CLPLRRT--SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKS--SELDYAR 69
Query: 86 SIFRQIDEP----------------------GAFD-----------FNTLIRGFVKEVEF 112
+F +I EP F+ +N +I GF +
Sbjct: 70 QLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDG 129
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACA-KLQALKEGMQIHGHVFKVGFECDLFVQNS 171
A+ L+ +M G +PD+FT+ ++ A + K+ +Q H K G V N+
Sbjct: 130 YSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNA 189
Query: 172 LINMYGKCEK----VEFASAIFKQMDQKSVASWSAIIAAHASN----------------- 210
L+++Y +C + A +F + +K SW+ ++ + N
Sbjct: 190 LVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENM 249
Query: 211 ---------------GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
GL+ E L++ M + +E SV+ AC + L LGK
Sbjct: 250 KLVAYNAMISGYVNCGLYQEALEMVRRMVSSGI-ELDEFTYPSVIRACANARLLQLGKQV 308
Query: 256 HGSLIR------------------------------NISALNVIVETSLIDMYVKCGCLE 285
H ++R + A +++ +L+ YV G +
Sbjct: 309 HAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ +F+ M +K L++ +MISGLA +G G+E L +FS M REG EP D + G + +C+
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
G G F ++ ++ ++ + + G++ EA ++ ++MP + V W
Sbjct: 429 VLGAYCNGQQ-FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSW 486
Query: 406 RSLLSASKVH-HNLEIGEI 423
+L++A H H +E ++
Sbjct: 487 NALIAALGQHGHGVEAVDV 505
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/570 (36%), Positives = 322/570 (56%), Gaps = 7/570 (1%)
Query: 36 TILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ L C N E E K VHA ++ GF + LV G M A + + +
Sbjct: 504 SALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTM--YGKLGMMMEAKKVLQTMP 561
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGM 151
+P +N LI G + E EA+ Y + E+G+ + T ++ AC A LK GM
Sbjct: 562 QPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGM 621
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH H+ GFE D +V+NSLI MY KC + ++ IF + KS +W+A++AA+A +G
Sbjct: 622 PIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHG 681
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E LK+FGEM N ++ L+A +L L+ G+ HG +I+ ++ V
Sbjct: 682 CGEEALKIFGEMRNVGV-NLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVT 740
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ +DMY KCG + L + ++ +L+++++IS A HG ++A F EML+ G +
Sbjct: 741 NAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPK 800
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V +V +LSAC+H GLV+EGL +D M E+ + P ++H C++DL+GR+G L A
Sbjct: 801 PDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEG 860
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+ MP+ ND+ WRSLL+A ++H NLE+ A++L +++ S YVL SN+ A + +
Sbjct: 861 FIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGK 920
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R EM S + + P S V++ KV+ F ++ HP I + ++ K
Sbjct: 921 WEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKE 980
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD S L D+DE++K L HS++LA+AF LI+ + S +RI +NLR+C DCH+
Sbjct: 981 AGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSV 1040
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
K +S I R+I++RD RFH F G CSC
Sbjct: 1041 YKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 6/374 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
NL+ + +H V+K G N C N + T S G + A +F+ + E +N++
Sbjct: 413 NLKWGRGIHGLVVKLGLDSN-VCICNTLLTL-YSEAGRSEDAELVFQAMTERDLISWNSM 470
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ +V++ + + L + E+ + G ++ TF + AC+ + L E +H + GF
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGF 530
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
L V N+L+ MYGK + A + + M Q +W+A+I HA N +E +K + +
Sbjct: 531 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY-K 589
Query: 223 MNNEKCWRPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+ EK +VSVL AC+ L G H ++ + V+ SLI MY KC
Sbjct: 590 LIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKC 649
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G L +F + +K +T++ M++ A HG G+EAL IF EM G+ D + G L
Sbjct: 650 GDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGL 709
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+A ++ ++ EG + ++ + +D+ G+ G + + L+++ PI ++
Sbjct: 710 AATANLAVLEEGQQ-LHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRS 767
Query: 402 DVVWRSLLSASKVH 415
+ W L+SA H
Sbjct: 768 RLSWNILISAFARH 781
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 187/379 (49%), Gaps = 29/379 (7%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNT 101
+E +VH V+K G + + V T + +GS+ A +F ++ + + +
Sbjct: 213 DEGFQVHGFVVKTGILGDVY-----VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTS 267
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+ G+ E L +Y M + GV + TF + +C L+ G Q+ GH+ + G
Sbjct: 268 LMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYG 327
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
FE + V NSLI+M+ VE A +F M++ + SW+A+I+A+A +GL E L+ F
Sbjct: 328 FEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH 387
Query: 222 EM---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
M +NE + L S+LS C+ + L G+ HG +++ NV + +L+ +Y
Sbjct: 388 WMRHLHNET----NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLY 443
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+ G E +F+ M ++ ++++ M++ G+ + L I +E+L+ G + V +
Sbjct: 444 SEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFA 503
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY------GCVVDLMGRAGMLGEALEL 392
L+ACS+ C K+ + ++ + +V + G+ GM+ EA ++
Sbjct: 504 SALAACSNPE-------CLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+Q+MP Q + V W +L+
Sbjct: 557 LQTMP-QPDRVTWNALIGG 574
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 133/251 (52%), Gaps = 2/251 (0%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S +G++++A +F ++ ++T++ G+V+ +EEA+ L+ +M+ GVEP+ F
Sbjct: 140 SKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVA 199
Query: 136 ALFKACAKLQAL-KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+L AC++ + EG Q+HG V K G D++V +L++ YG V A +F++M
Sbjct: 200 SLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 259
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+V SW++++ ++ +G E L ++ M E ++ +V S+C L LG
Sbjct: 260 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV-SGNQNTFATVTSSCGLLEDQVLGYQ 318
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
G +I+ +V V SLI M+ +E+ +F M + ++++ MIS A HG
Sbjct: 319 VLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGL 378
Query: 315 GKEALSIFSEM 325
+E+L F M
Sbjct: 379 CRESLRCFHWM 389
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 22/312 (7%)
Query: 116 LFLYNEMFERGVEPDN-FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
+FL + + G+ N FP K +++ + G +H +F N+LIN
Sbjct: 80 VFLQQQHTDYGIRCLNAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLIN 137
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW----R 230
MY K +E A +F +M ++ ASWS +++ + GL+ E + LF +M W
Sbjct: 138 MYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM-----WGLGVE 192
Query: 231 PEESILVSVLSACTHLGAL-DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P ++ S+++AC+ G + D G HG +++ +V V T+L+ Y G +
Sbjct: 193 PNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 252
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF M D ++++ ++ G + G E L+++ M +EG+ + + V S+C GL
Sbjct: 253 LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC---GL 309
Query: 350 VNEGLLCFDRMK--LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WR 406
+ + +L + + ++Y +V ++ + + EA + M + D++ W
Sbjct: 310 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHM--NECDIISWN 367
Query: 407 SLLSASKVHHNL 418
+++SA HH L
Sbjct: 368 AMISA-YAHHGL 378
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/545 (37%), Positives = 307/545 (56%), Gaps = 43/545 (7%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM-------- 151
N+L+R + A + ++ + PDN++F L +A L A
Sbjct: 166 NSLLRALARGRRPHLAFGAFRDL---PLVPDNYSFTFLVRAATALAAAAASALDAALIAG 222
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKV----------------------------- 182
+H + G D VQ+ ++MY V
Sbjct: 223 SVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASPDVVCVTAMVGALATGG 282
Query: 183 --EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+ A +F M Q+ +W+A+IA + G E L+LF EM + E + LVS L
Sbjct: 283 EADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVT-LVSAL 341
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
+AC LGAL+ GK H L+V + T+LIDMY KCG + + +F M ++
Sbjct: 342 TACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNVY 401
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
T++ +SGLAM+G G++ L++F M G+EP+ V +V VL CS AGLV+EG CFD M
Sbjct: 402 TWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDSM 461
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
K + I P ++HYGC+VDL GRAG L +A+ I MP++ ++ VW +LL+AS++H N+E+
Sbjct: 462 KSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVEL 521
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
G+ A L I S + + +VLLSN+YA +Q W V+ +R M +KG+ + PG S +EV
Sbjct: 522 GKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVGG 581
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
KV++F ++HP I M+ +M +L+ +GY + +VL D++E++K + + HS+K
Sbjct: 582 KVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQGYIANTKEVLFDIEEEDKEDAISLHSEK 641
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LAIAF L+ L + IRI +NLR+C DCH YTK+IS ++ REI++RDR RFH FKDG CS
Sbjct: 642 LAIAFGLVALPEDMEIRIVKNLRVCEDCHDYTKMISKVFNREIVMRDRNRFHHFKDGACS 701
Query: 601 CRDYW 605
C+DYW
Sbjct: 702 CKDYW 706
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
C + +V AL+ G D A +F + + +N +I G+V EAL L++EM
Sbjct: 270 CVTAMVG--ALATGGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRH 327
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
G T + ACA+L AL+ G +H G + + +LI+MY KC V
Sbjct: 328 AGAAVGEVTLVSALTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAA 387
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F M +++V +W++ ++ A NG+ +CL LF M + P V VL C+
Sbjct: 388 AMEVFDSMGERNVYTWTSAVSGLAMNGMGRDCLALFKRMESTGV-EPNGVTFVVVLRGCS 446
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMM 294
G +D G+ S+ N ++ +E ++D+Y + G L+ + M
Sbjct: 447 MAGLVDEGRACFDSMKSN-HGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGM 497
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 301/549 (54%), Gaps = 32/549 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A IF ++ E +NT+I G+ + E EA +FE D FT+ A+ +
Sbjct: 223 ARGIFDRMPERDEVSWNTMISGYAQNGELLEA----QRLFEESPVRDVFTWTAMVSGYVQ 278
Query: 144 LQALKEGMQIHG----------HVFKVGF-ECDLFVQ----------------NSLINMY 176
L E ++ + G+ +C Q N++I Y
Sbjct: 279 NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGY 338
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
+ + A F +M Q+ SW+AIIA +A +G E L LF EM + R S
Sbjct: 339 AQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE-RLNRSTF 397
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
S LS C + AL+LGK HG +++ V +L+ MY KCG ++ +F + +
Sbjct: 398 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 457
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K ++++ MI+G A HG GKEAL +F M + G+ PDDV VGVLSACSH GLV++G
Sbjct: 458 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 517
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M +Y I +HY C++DL+GRAG L +A L+++MP + + W +LL AS++H
Sbjct: 518 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 577
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N E+GE AAK +F++ + YVLLSN+YA + RW DV ++R M +G+ + PG+S V
Sbjct: 578 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 637
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
EV K++ F D HP D IY + +++ ++K EGY VL DV+E+EK LK
Sbjct: 638 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 697
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF ++ + G PIR+ +NLR+C DCH K IS I R II+RD RFH F
Sbjct: 698 HSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNG 757
Query: 597 GTCSCRDYW 605
G CSC DYW
Sbjct: 758 GQCSCGDYW 766
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 41/336 (12%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N I ++ + + AL L+N M R + ++ A+ C + + +F
Sbjct: 52 WNIAITNHMRNGQCDSALRLFNSMPRR----SSISWNAMISGCLS----NDKFYLARQLF 103
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+ DL N +I+ + + A +F QM ++ V SW+A+++ +A NG E +
Sbjct: 104 EKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKE 163
Query: 219 LFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+F EM N W +L+A G ++ + L + + +I ++
Sbjct: 164 IFDEMPCKNSISWN-------GMLAAYVQNGRIEDAR----RLFESKADWELISWNCMMG 212
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP--DD 334
YVK L +F M ++ +++++ MISG A +G+ EA +F E P D
Sbjct: 213 GYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVRDV 266
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ ++S G+++E FD M + + + ++ + + +A EL +
Sbjct: 267 FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV-----SWNAIIAGYVQCKRMDQARELFE 321
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIA-AKNLF 429
+MP QN W ++++ + G+IA A+N F
Sbjct: 322 AMPC-QNVSSWNTMITGYA-----QNGDIAQARNFF 351
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKC 254
+ W+ I H NG L+LF M P S + +++S C L +
Sbjct: 49 IVKWNIAITNHMRNGQCDSALRLFNSM-------PRRSSISWNAMISGCLSNDKFYLAR- 100
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
L + +++ +I V+ L LF M ++ ++++ M+SG A +G
Sbjct: 101 ---QLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGY 157
Query: 315 GKEALSIFSEMLREGLEP--DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
KEA IF EM P + + + G+L+A G + + F+ K ++ ++
Sbjct: 158 VKEAKEIFDEM------PCKNSISWNGMLAAYVQNGRIEDARRLFES-KADWELIS---- 206
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+ C++ + L +A + MP ++++V W +++S + L + A+ LF+
Sbjct: 207 WNCMMGGYVKRNRLVDARGIFDRMP-ERDEVSWNTMISGYAQNGEL----LEAQRLFE 259
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/575 (35%), Positives = 325/575 (56%), Gaps = 8/575 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+IL C + + E ++VH H++K + + + + L+ + + A +F ++
Sbjct: 67 SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVL--YNKCDCLGDARGMFDEMP 124
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ + +I + + EAL L+ EM EP++FTF + +C + G Q
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH K +E +FV +SL++MY K ++ A +F + ++ V + +AII+ +A GL
Sbjct: 185 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGL 244
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E LKLF ++ E SVL+A + L AL+ GK H ++R+ V++
Sbjct: 245 DEEALKLFRQLQIEG-MNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 303
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LE 331
SLIDMY KCG + +F M ++ ++++ M+ G + HG +E L +F M E ++
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
PD + Y+ VLS CSH L + GL F M + I P + HYGCVVDL+GRAG + EA
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 423
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I+ MP +W SLL + +VH ++EIG I + L ++ + +YV+LSN+YA A
Sbjct: 424 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W D+ IR M K + + PG S VE+ + V+ F + D +HP + + + ++ + K
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFK 543
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
+GY PD+S VL DVDE++K + L GHS+KLA+AF LI +G+ IR+ +NLR+C DCH+
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 603
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ K +S +Y R +I+RD+ RFH G CSC DYW
Sbjct: 604 FAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 12/328 (3%)
Query: 89 RQIDEPGAFDFNTLIR-GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
RQI + + TL G +KE + A+ FE + ++ C +A+
Sbjct: 27 RQISFSPSPNLKTLCSSGQLKEALLQMAILGREVKFE--------GYDSILNECVSQRAI 78
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+EG ++H H+ K + ++++ LI +Y KC+ + A +F +M Q++V SW+A+I+A+
Sbjct: 79 REGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAY 138
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
+ G E L LF EM P ++L++C + G+ H I+ +
Sbjct: 139 SQRGFAFEALNLFVEMLRSDT-EPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESH 197
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
+ V +SL+DMY K G + +F + ++ + + +ISG A G +EAL +F ++
Sbjct: 198 MFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQI 257
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
EG+ + V Y VL+A S +N G + L V ++D+ + G +
Sbjct: 258 EGMNSNSVTYASVLTALSGLAALNHGKQVHSHV-LRSGQYSYVVLLNSLIDMYSKCGNVC 316
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
A + SMP ++ + W ++L H
Sbjct: 317 YARRIFDSMP-ERTCISWNAMLVGYSKH 343
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT L L K+VH+HVL+ G + ++L+ S G++ YA IF + E
Sbjct: 271 LTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDM--YSKCGNVCYARRIFDSMPER 328
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKEGMQI 153
+N ++ G+ K E L L+ M E V+PD+ T+ A+ C+ Q G++I
Sbjct: 329 TCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEI 388
Query: 154 HGHVF--KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
++ K G E D+ ++++ G+ +VE A K+M + A W +++ +
Sbjct: 389 FYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGS 444
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 318/547 (58%), Gaps = 33/547 (6%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
L WG +D A + Q E + +LI G+ + +A++ +N M GVEPD
Sbjct: 178 GLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVA 237
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK------------ 181
AC+KL+ L+ G +H V K + + +LI+MY KC
Sbjct: 238 VIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVG 297
Query: 182 --------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
V+ A ++F QM + V +++++I + +G + L+LF
Sbjct: 298 RGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFM 357
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
++ R + +VS+L+AC LGAL G+ H S+ + I +V + T+L+DMY+KC
Sbjct: 358 QLRRHG-MRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKC 416
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +++ +F M ++ T+S MI+GLA +G G +AL F +M R+G +P V Y+ VL
Sbjct: 417 GRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVL 476
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+ACSH+ L+NEG F+ M+ +++ P ++HYGC++DL+ R+G+L EA+ L+Q+MP+Q N
Sbjct: 477 TACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPN 536
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
V+W S+LSA +VH N+++ AA++L ++ + YV L N+Y +++W + +IR
Sbjct: 537 AVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRML 596
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ ++ G+S + VA +V+KFV D+SHP I M+ ++ +LK GYSP S++
Sbjct: 597 MEEQGVKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAGYSPATSRI 656
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
DVDE+EK + L HS+K+AIAF LI L PI I +NLR+C DCH+ KLIS ++ R
Sbjct: 657 AVDVDEEEKEQALLAHSEKIAIAFGLISLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNR 716
Query: 582 EIIVRDR 588
EIIVRDR
Sbjct: 717 EIIVRDR 723
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 182/441 (41%), Gaps = 74/441 (16%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNPFCASNLV--ATCALSHWGSMDYACSIFRQIDEPGAF 97
T +++ + ++HA + G + A +L+ T LS + Y S+F ++ P F
Sbjct: 8 TPRSVRQASQLHAILTTSGRIAHRPSAEHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTTF 67
Query: 98 DFNTLIRGFVK-EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+T +R ++ + + + M GV FTF +F+ CA +H
Sbjct: 68 LHDTALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCRMLHAA 127
Query: 157 VFKVGF-ECDLFVQNSLINMYGKC----------------EKVEFASAI----------- 188
+ V N LI+MY + V +A+ I
Sbjct: 128 CLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLVRWGLLDE 187
Query: 189 ----FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
Q +++V SW+++IA ++ G ++ + F M ++ P+E ++ LSAC+
Sbjct: 188 ARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGV-EPDEVAVIGALSACS 246
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK------------------ 286
L L+ G+ H + + + + +LIDMY KCG + +
Sbjct: 247 KLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWN 306
Query: 287 ----GLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
G C LF M + +T++ MI+G G+ ++AL +F ++ R G+
Sbjct: 307 VIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRA 366
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV-PTVQHYGCVVDLMGRAGMLGEALE 391
D+ V +L+AC+ G + +G +E RIV V +VD+ + G + EA
Sbjct: 367 DNFTVVSLLTACASLGALPQGRAL--HASIEQRIVEEDVYLVTALVDMYMKCGRVDEATA 424
Query: 392 LIQSMPIQQNDV-VWRSLLSA 411
+ M + DV W ++++
Sbjct: 425 VFHRM--GERDVHTWSAMIAG 443
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 107/218 (49%), Gaps = 17/218 (7%)
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ +V ++I V+ G L++ L ++ ++++ +I+G + G+ +A+ F+ ML
Sbjct: 168 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 227
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEG-----LLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
+G+EPD+V +G LSACS + G L+ R+++ ++V T ++D+
Sbjct: 228 SDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVT------LIDMYA 281
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF-QINSHHPSDYV 440
+ G + +A + ++ Q W ++ +++I A++LF Q+ + +
Sbjct: 282 KCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDI----ARSLFDQMGARDVITFN 337
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEV 478
+ Y + R D ++ ++ G+ ++ F++V +
Sbjct: 338 SMITGYIHSGRLRDALQLFMQLRRHGM-RADNFTVVSL 374
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/571 (37%), Positives = 311/571 (54%), Gaps = 42/571 (7%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C N+ KK+H K G F + LV+ G + A + ++
Sbjct: 147 VLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSM--YGKCGFLSEARLVLDEMSR 204
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+L+ G+ + F++AL + EM + D T +L A
Sbjct: 205 RDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA------------- 251
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
V N+ E V + +F +M +KS+ SW+ +I + N +
Sbjct: 252 --------------VSNT------TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 291
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++L+ M + + P+ + SVL AC AL LGK HG + R N+++E +
Sbjct: 292 VEAVELYSGMEADG-FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 350
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCGCL++ +F M + ++++ MIS G+G +A+++FS+M GL PD
Sbjct: 351 LIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPD 410
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ +V L+ACSHAGL+ EG CF M Y+I P ++H C+VDL+GRAG + EA + I
Sbjct: 411 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFI 470
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
Q MP++ N+ VW +LL A +VH N +IG +AA LFQ+ YVLLSN+YA+A RW
Sbjct: 471 QEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWE 530
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+V IR M SKGL ++PG S VEV R ++ F+ DRSHP IY + + ++K G
Sbjct: 531 EVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELG 590
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ---GSPIRIARNLRMCNDCHT 570
Y PD L DV+E++K L HS+KLAI FAL++ + + IRI +NLR+C DCH
Sbjct: 591 YVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHV 650
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
KLIS I REII+RD RFH F+ G CSC
Sbjct: 651 AAKLISQITSREIIIRDTNRFHVFRFGVCSC 681
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 177/376 (47%), Gaps = 40/376 (10%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+L T +L+ + VH+ ++ +N L+ A + + A +F +I E
Sbjct: 49 VLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMR--AYASLKDVATARKVFDEIPERNV 106
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
N +IR +V + E + ++ M V+PD++TFP + KAC+ + G +IHG
Sbjct: 107 IIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGS 166
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
KVG LFV N L++MYGKC + A + +M ++ V SW++++A +A N + +
Sbjct: 167 ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDA 226
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L++ EM + K + + S+L A + N + NV
Sbjct: 227 LEVCREMESVKISH-DAGTMASLLPA-----------------VSNTTTENV-------- 260
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MYVK +F M K ++++VMI + EA+ ++S M +G EPD V
Sbjct: 261 MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVS 312
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
VL AC ++ G ++ + +++P + ++D+ + G L A ++ ++M
Sbjct: 313 ITSVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLDRARDVFENM 371
Query: 397 PIQQNDVV-WRSLLSA 411
+ DVV W +++SA
Sbjct: 372 --KSRDVVSWTAMISA 385
>gi|357124741|ref|XP_003564056.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Brachypodium distachyon]
Length = 594
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/584 (37%), Positives = 321/584 (54%), Gaps = 21/584 (3%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALS-HWGSMDYACSIFRQIDEP 94
+L L +K+ HA +L +P + + ALS H ++ +A R + P
Sbjct: 17 LLPRLTTLSHYKQFHARLLSSAVLHLDPSLRARFLDRLALSDHPAALPHALLFLRSLPSP 76
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP-----DNFTFPALFKACAKLQALKE 149
DFN +RG +L L P D + KA A+
Sbjct: 77 ATNDFNAALRGLAASPHPARSLLLLAGRLLPSPSPPPPRLDALSLSFALKASARCSDGTA 136
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
+Q+H + ++G D+ + +L++ Y KC + A +F +M + VASW+A++A A
Sbjct: 137 TLQLHALLLRLGCTPDVRLITTLVDSYAKCGDLASARKVFDEMVVRDVASWNALLAGLAQ 196
Query: 210 NGLWSECLKLFGEMNNE-----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ L LF + P E +V+ LSAC +G+L G H R I
Sbjct: 197 GTEPTLALALFHRLVGSFRELPPREEPNEVTIVAALSACAQIGSLQDGLYVH-EFARKIG 255
Query: 265 A-LNVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEALSI 321
NV V +LIDMY KCG L+ L +F + D+ ++Y+ I ++MHG G +AL +
Sbjct: 256 VNGNVRVCNALIDMYSKCGSLDLALEVFHSIKREDRTLVSYNTAIQAVSMHGHGGDALRL 315
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM +EPD+V Y+ VL C+HAGLV++GL F M R++P V+HYG VVDL+G
Sbjct: 316 FDEM-PTFIEPDEVTYIAVLCGCNHAGLVDDGLRVFHSM----RVLPNVKHYGAVVDLLG 370
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L EA + I SMP + V+W++LL A+K H ++E+ E+AA L ++ S+ DYVL
Sbjct: 371 RAGRLAEAYDTIVSMPFPADIVLWQTLLGAAKTHGDVELAELAATKLDELGSNVDGDYVL 430
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSN+YA RW DV ++R M S + + PGFS E++ ++KF++ D+ HP W IY
Sbjct: 431 LSNVYASKARWADVRRVRDTMRSNDVRKVPGFSYTEISGVMHKFINGDKEHPRWQEIYRA 490
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ ++ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G +R+ +N
Sbjct: 491 LEEIVSRIGELGYEPETSNVLHDIGEEEKQYALSYHSEKLAIAFGLIATPPGETLRVIKN 550
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LR C DCH KLIS Y R II+RDR RFH+F+DG CSC+DYW
Sbjct: 551 LRTCGDCHVVAKLISKAYGRVIIIRDRARFHQFEDGQCSCKDYW 594
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/543 (37%), Positives = 318/543 (58%), Gaps = 6/543 (1%)
Query: 68 NLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
++V T +S +G + + A S+F ++ ++ ++ + + EAL L+ +M
Sbjct: 111 SIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL 170
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
GV P+ T + ACA L L+ G +H V G + + V +L+N+YGKC ++E
Sbjct: 171 DGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEA 230
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A+ F Q+ +K+V +WSAI AA+A N + +++ M+ E P + VSVL AC
Sbjct: 231 AAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGL-APNSTTFVSVLDACA 289
Query: 245 HLGALDLGKCTHGSLIRNISAL--NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
+ AL G+ H + L +V V T+L++MY KCG L +F +A + +
Sbjct: 290 AIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLW 349
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I+ A HGQ ++AL +F M EGL+P + + VL ACSHAG++++G F
Sbjct: 350 NSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIG 409
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
++ I P +H+GC+VDL+GRAG + ++ +L+ MP + + V W + L A + + N++
Sbjct: 410 DHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAI 469
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
AA+NLFQ++ + YVLLSNMYA+A RW DVA++R M + G S +EV +V
Sbjct: 470 WAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRV 529
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+S D HP I+ + ++ +K GY PD VL DV ++ K + HS+KLA
Sbjct: 530 HEFISGDLDHPRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLA 589
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+AFAL+ +GSPIR+ +NLR+CNDCHT +K IS + REI+VRD RFHRF++G CSC
Sbjct: 590 MAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCG 649
Query: 603 DYW 605
DYW
Sbjct: 650 DYW 652
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 159/339 (46%), Gaps = 3/339 (0%)
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D A ++F I F + ++ F + +F+ + M +G+ P AC
Sbjct: 27 DDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGINPGEVGISIFLSAC 86
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
+ + G I + G E + VQ +L+++YGK A+++F +M + V +WS
Sbjct: 87 TDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWS 146
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A++AA+A NG E L LF +M+ + P + LVS L AC LG L G H +
Sbjct: 147 AMVAAYARNGHPREALGLFRQMDLDGV-APNKVTLVSGLDACASLGDLRSGALMHQRVEA 205
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
V+V T+L+++Y KCG +E F + +K + +S + + A + + ++A+ +
Sbjct: 206 QGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRV 265
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK-LEYRIVPTVQHYGCVVDLM 380
M EGL P+ +V VL AC+ + +G +R+ L + V +V++
Sbjct: 266 LHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMY 325
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ G L A + + + V+W SL++ + H E
Sbjct: 326 SKCGNLALAGNMFDKIA-HLDLVLWNSLIATNAQHGQTE 363
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 130/253 (51%), Gaps = 3/253 (1%)
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
++G+ + F+ N LI++Y KC++ + A A+F + K+V SW+ ++AA A N + C
Sbjct: 3 ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F M + P E + LSACT + +G+ +++ IV+T+L+ +Y
Sbjct: 63 FFRGMLLQGI-NPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLY 121
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
K G +F M+ + + +S M++ A +G +EAL +F +M +G+ P+ V V
Sbjct: 122 GKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLV 181
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
L AC+ G + G L R++ + I V +V+L G+ G + A E + +
Sbjct: 182 SGLDACASLGDLRSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI-V 239
Query: 399 QQNDVVWRSLLSA 411
++N V W ++ +A
Sbjct: 240 EKNVVAWSAISAA 252
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 325/591 (54%), Gaps = 35/591 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
KK+HA ++K G + + L+ A G + A +F + + +L+
Sbjct: 23 KKLHAQIIKAGLNQHEPIPNTLLN--AYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL--KEGMQIHGHVFKVGFECD 165
AL + + G PD+F F +L KACA L L K+G Q+H F F D
Sbjct: 81 LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG-------------- 211
V++SLI+MY K ++ A+F + + SW+ +I+ +A +G
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200
Query: 212 ----LWS-------------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
W+ + LF EM +E + +L SV+ AC +L +LGK
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQ 260
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG +I + + +LIDMY KC L +F M K ++++ +I G A HGQ
Sbjct: 261 MHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQ 320
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+EAL+++ EM+ G++P++V +VG++ ACSHAGLV++G F M ++ I P++QHY
Sbjct: 321 AEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYT 380
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
C++DL R+G L EA LI++MP+ ++ W +LLS+ K H N ++ A +L +
Sbjct: 381 CLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPE 440
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
PS Y+LLSN+YA A W DV+K+R M + ++PG+S +++ + + F + + SHP
Sbjct: 441 DPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETSHPM 500
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
D I ++ +++ +++ GY+PD S VL D+D+ EK +L HS++LA+A+ L+ G+
Sbjct: 501 RDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAVPGT 560
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IRI +NLR+C DCHT KLIS I REI VRD KR+H FKDG CSC D+W
Sbjct: 561 VIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 322/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C +L + +VH V+K GF F SNL T S G + AC F ++
Sbjct: 181 SVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNL--TDMYSKCGELSDACKAFEEMP 238
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
A + ++I GFVK +F++AL Y +M V D + AC+ L+A G
Sbjct: 239 CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKS 298
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK-QMDQKSVASWSAIIAAHASNG 211
+H + K+GFE + F+ N+L +MY K + AS +F+ D S+ S +AII +
Sbjct: 299 LHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMD 358
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
+ L F ++ + P E S++ AC + L+ G HG +++ + V
Sbjct: 359 QIEKALSTFVDLR-RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS 417
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++L+DMY KCG + + LF + + ++ ++ ++ + HG G+ A+ F+ M+ GL+
Sbjct: 418 STLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLK 477
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+ V +V +L CSHAG+V +GL F M+ Y +VP +HY CV+DL+GRAG L EA +
Sbjct: 478 PNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAED 537
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I +MP + N W S L A K+H ++E + AA L ++ + +VLLSN+YA+ ++
Sbjct: 538 FINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQ 597
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W DV +R + +N+ PG+S V++ K + F +D SHP IYE + + Q+K
Sbjct: 598 WEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKR 657
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY P VL D+D++ K + L HS+++A+AF+L+ G PI + +NLR+C+DCH+
Sbjct: 658 IGYVPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSA 717
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS + ER IIVRD RFH F +G+CSC DYW
Sbjct: 718 LKFISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 191/379 (50%), Gaps = 14/379 (3%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQIDEPGAFD 98
K L + K++HA +++ G N F ++ NL + C G +DY +F ++ +
Sbjct: 89 KELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKC-----GELDYTIKLFDKMSQRNMVS 143
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ ++I GF F+EAL + +M G F ++ +AC L A++ G Q+H V
Sbjct: 144 WTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVV 203
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K GF C+LFV ++L +MY KC ++ A F++M K W+++I NG + + L
Sbjct: 204 KCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALT 263
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
+ +M + + ++ +L S LSAC+ L A GK H ++++ + +L DMY
Sbjct: 264 AYMKMVTDDVF-IDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMY 322
Query: 279 VKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
K G + +F++ +D + + + +I G Q ++ALS F ++ R G+EP++ +
Sbjct: 323 SKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTF 382
Query: 338 VGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ AC++ + G L +K ++ P V +VD+ G+ G+ +++L +
Sbjct: 383 TSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS--STLVDMYGKCGLFDHSIQLFDEI 440
Query: 397 PIQQNDVVWRSLLSASKVH 415
+++ W +L+ H
Sbjct: 441 E-NPDEIAWNTLVGVFSQH 458
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D T L + A+ + L +G Q+H + + G + F+ N +N+Y KC ++++ +F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+M Q+++ SW++II A N + E L F +M E + + L SVL ACT LGA+
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFA-LSSVLQACTSLGAI 192
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
G H +++ + V ++L DMY KCG L F M K + ++ MI G
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+G K+AL+ + +M+ + + D V LSACS
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACS 288
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/613 (33%), Positives = 334/613 (54%), Gaps = 73/613 (11%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F WN + A + GS+ + F ++ + +NT I GF +E+L L
Sbjct: 90 FSWNALLS-------AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLEL 142
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ M G EP +T ++ A A+L L+ G QIHG + F ++F+ N+L +MY K
Sbjct: 143 FKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAK 202
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN-------------- 224
C ++E A +F + +K++ SW+ +I+ +A NG +C+ L +M
Sbjct: 203 CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI 262
Query: 225 --------------------NEK---CW-----------RPEESILV------------- 237
EK CW R E+++L+
Sbjct: 263 IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322
Query: 238 ----SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
SV+S+C L +L G+ HG I N++V ++LIDMY KCG ++ +F +
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + ++++ MI G A +G K+AL +F ML++ +PD+V ++G+LSAC H + +G
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG 442
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
FD + ++ + PT+ HY C+V+L+GR G + +A+ LI++M + ++W +LLS
Sbjct: 443 QEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICS 502
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
++ E+AA++LF+++ Y++LSNMYA RW DVA +R M SK + + GF
Sbjct: 503 TKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGF 562
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S +E+ +V++F S+DR+HP ++IYE ++ + +L+ EG++P+ + VL DV EDEK +
Sbjct: 563 SWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKS 622
Query: 534 LKGHSQKLAIAFALIHLSQG-SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
+ HS+KLA+AF LI G SPIRI +N+R+CNDCH + K S I R+II+RD RFH
Sbjct: 623 ICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFH 682
Query: 593 RFKDGTCSCRDYW 605
F G CSC D W
Sbjct: 683 HFSTGKCSCNDNW 695
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 33/260 (12%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFE-CDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ L C + + + ++ H+ F+ D F+ N L+++Y K K+ A +F +M
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 193 DQKSVASWSAIIAAHASNGLW-------------------------------SECLKLFG 221
++ + SW+A+++A+A +G E L+LF
Sbjct: 85 LKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M E + P E +VS+L+A L L GK HGS+I NV + +L DMY KC
Sbjct: 145 RMQREG-FEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC 203
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E+ LF + K +++++MISG A +GQ ++ + + +M G PD V ++
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 342 SACSHAGLVNEGLLCFDRMK 361
+A G V+E F K
Sbjct: 264 AAYCQCGRVDEARRVFSEFK 283
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 334/583 (57%), Gaps = 16/583 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL-----VATCALSHW---GSMDYACS 86
L +L L + VHA+ ++ N S L + T L + GS+ YA
Sbjct: 235 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 294
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV---EPDNFTFPALFKACAK 143
+F + ++ LI GFV +A L+ M +G+ P + + +ACA
Sbjct: 295 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS 352
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L+ G Q+H + K G DL NSL++MY K ++ A A+F +M K S+SA+
Sbjct: 353 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 412
Query: 204 IAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ + NG E +F +M + C P+ + +VS++ AC+HL AL G+C+HGS+I
Sbjct: 413 VSGYVQNGRAEEAFLVFKKM--QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
A + +LIDMY KCG ++ +F MM + ++++ MI+G +HG GKEA ++F
Sbjct: 471 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 530
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
EM G PD V ++ +LSACSH+GLV EG F M Y + P ++HY C+VDL+ R
Sbjct: 531 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 590
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
G L EA E IQSMP++ + VW +LL A +V+ N+++G+ ++ + ++ ++VLL
Sbjct: 591 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 650
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+Y+ A R+ + A++R +G +SPG S +E+ ++ FV D+SHP IY +
Sbjct: 651 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 710
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+ +K GY PD S VL+D++E+EK + L HS+KLAIA+ ++ LS+ I + +NL
Sbjct: 711 DNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNL 770
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCHT K IS++ R IIVRD RFH FK+G CSC D+W
Sbjct: 771 RVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 38/358 (10%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKE--VEFEEALFLYNEMFERGVEPDNFTFPA 136
G + A +F QI P +N LIR + + L LY M V P+N+TFP
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
KAC+ L G IH H G + DLFV +L++MY KC + A+ IF M +
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNE-KCWRPEESILVSVLSACTHLGALDLGKCT 255
+ +W+A++A +A +G++ + M + RP S LV++L GAL G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 256 HGSLIRNISALN----------VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
H IR N V++ T+L+DMY KCG L +F M + ++T+S +
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 306 ISGLAMHGQGKEALSIFSEMLREG---LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
I G + + +A +F ML +G L P + L AC+ D +++
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACA----------SLDHLRM 358
Query: 363 EYRIVPTVQHYGCVVDLM---------GRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++ + G DL +AG++ +A+ L M + ++ V + +L+S
Sbjct: 359 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV-KDTVSYSALVSG 415
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 334/583 (57%), Gaps = 16/583 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL-----VATCALSHW---GSMDYACS 86
L +L L + VHA+ ++ N S L + T L + GS+ YA
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARR 179
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV---EPDNFTFPALFKACAK 143
+F + ++ LI GFV +A L+ M +G+ P + + +ACA
Sbjct: 180 VFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACAS 237
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L+ G Q+H + K G DL NSL++MY K ++ A A+F +M K S+SA+
Sbjct: 238 LDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSAL 297
Query: 204 IAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ + NG E +F +M + C P+ + +VS++ AC+HL AL G+C+HGS+I
Sbjct: 298 VSGYVQNGRAEEAFLVFKKM--QACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
A + +LIDMY KCG ++ +F MM + ++++ MI+G +HG GKEA ++F
Sbjct: 356 GLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALF 415
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
EM G PD V ++ +LSACSH+GLV EG F M Y + P ++HY C+VDL+ R
Sbjct: 416 LEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSR 475
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
G L EA E IQSMP++ + VW +LL A +V+ N+++G+ ++ + ++ ++VLL
Sbjct: 476 GGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 535
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+Y+ A R+ + A++R +G +SPG S +E+ ++ FV D+SHP IY +
Sbjct: 536 SNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYREL 595
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+ +K GY PD S VL+D++E+EK + L HS+KLAIA+ ++ LS+ I + +NL
Sbjct: 596 DNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNL 655
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCHT K IS++ R IIVRD RFH FK+G CSC D+W
Sbjct: 656 RVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 144/313 (46%), Gaps = 36/313 (11%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK 181
M V P+N+TFP KAC+ L G IH H G + DLFV +L++MY KC
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE-KCWRPEESILVSVL 240
+ A+ IF M + + +W+A++A +A +G++ + M + RP S LV++L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 241 SACTHLGALDLGKCTHGSLIRNISALN----------VIVETSLIDMYVKCGCLEKGLCL 290
GAL G H IR N V++ T+L+DMY KCG L +
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG---LEPDDVVYVGVLSACSHA 347
F M + ++T+S +I G + + +A +F ML +G L P + L AC+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI--ASALRACA-- 236
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM---------GRAGMLGEALELIQSMPI 398
D +++ ++ + G DL +AG++ +A+ L M +
Sbjct: 237 --------SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 288
Query: 399 QQNDVVWRSLLSA 411
++ V + +L+S
Sbjct: 289 -KDTVSYSALVSG 300
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 320/558 (57%), Gaps = 27/558 (4%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFL 118
NP S L+ ++ +D A IF + + + + G+ + +AL +
Sbjct: 173 NPKLLSKLITLFSVCR--RLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIV 230
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
Y +M +EP NF+ KAC L+ L+ G IH + K + D V N L+ +Y +
Sbjct: 231 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 290
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK---CWRPEESI 235
+ A +F M +++V +W+++I+ + E LF +M E W +
Sbjct: 291 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW----AT 346
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
L ++L AC+ + AL GK H ++++ +V + SL+DMY KCG +E +F +M
Sbjct: 347 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 406
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
K ++++M++ A++G +E +++F M+ G+ PD + +V +LS CS GL GL
Sbjct: 407 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 466
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+RMK E+R+ P ++HY C+VD++GRAG + EA+++I++MP + + +W SLL++ ++H
Sbjct: 467 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 526
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N+ +GEIAAK LF + H+P +YV++SN+YA A+ W +V KIR M +G+ + G S
Sbjct: 527 GNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSW 586
Query: 476 VEVARKV--------YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
V+V K+ Y+F + D W + E I + GYSP+ S VL DVDE
Sbjct: 587 VQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEK-------SGYSPNTSVVLHDVDE 639
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+ K + GHS++LA ++LIH +G PIRI +NLR+C DCH++ K++S + R I++RD
Sbjct: 640 ETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRD 699
Query: 588 RKRFHRFKDGTCSCRDYW 605
KRFH F DG CSC+DYW
Sbjct: 700 TKRFHHFVDGICSCKDYW 717
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/564 (34%), Positives = 308/564 (54%), Gaps = 40/564 (7%)
Query: 79 GSMDYACSIFRQIDEPGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
G ++ A S+F ++D G FD +N +I G+V+ +A L+ M V D FTF +
Sbjct: 248 GDVNAARSVFEEVD--GKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 305
Query: 137 LFKACAKLQALKEGMQIHGHVFKV--GF--ECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ ACA G +HG + ++ F E L V N+L+ +Y K K+ A IF M
Sbjct: 306 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 365
Query: 193 DQKSVASWSAI-------------------------------IAAHASNGLWSECLKLFG 221
+ K V SW+ I ++ + GL + LKLF
Sbjct: 366 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 425
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M E +P + ++AC LGAL G+ H L++ + +L+ MY KC
Sbjct: 426 QMRAEDV-KPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC 484
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G + +F +M + ++++ MIS L HG G+EAL +F +M+ EG++PD + ++ +L
Sbjct: 485 GAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 544
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+AC+HAGLV+EG F+ MK ++ I P HY ++DL+GR+G +GEA +LI++MP +
Sbjct: 545 TACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT 604
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W ++LS + + ++E G AA LF++ H Y+LLSN Y+ A RW D A++R
Sbjct: 605 PSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKL 664
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ + PG S +EV K++ F+ D HP +Y+ + + +++ GY PD V
Sbjct: 665 MRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFV 724
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L D++ EK L HS+KLA+ F L+ L G+ + + +NLR+C DCHT +S R
Sbjct: 725 LHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGR 784
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD +RFH FKDG CSC +YW
Sbjct: 785 EIVVRDVRRFHHFKDGECSCGNYW 808
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 204/493 (41%), Gaps = 91/493 (18%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCA 66
LH LL P P L LRL L+ +L A + + P A
Sbjct: 47 LHARLLTADLLHAPSHPHLTLRLIHLYTLS-----PDL----ATPAALFRSDPDPGPVAA 97
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMF 123
++LVA A + G + A + F + P D N ++ F + A+ +++ +
Sbjct: 98 TSLVAAHAAA--GRLRDAAAFFDAV-PPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 154
Query: 124 ERG-VEPDNFTFPALFKACAKLQALKEG--MQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
G + PD+++F AL A ++ L Q+H V K G L V N+LI +Y KC+
Sbjct: 155 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 214
Query: 181 K----------------------------------VEFASAIFKQMDQKSVASWSAIIAA 206
V A ++F+++D K W+A+I+
Sbjct: 215 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 274
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR----- 261
+ +G+ ++ +LF M +EK +E SVLSAC + G GK HG +IR
Sbjct: 275 YVQSGMCADAFELFRRMVSEKVPL-DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNF 333
Query: 262 ------------------------------NISALNVIVETSLIDMYVKCGCLEKGLCLF 291
++ +V+ +++ Y+ GCL+K + +F
Sbjct: 334 VPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVF 393
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
++M K L++ VM+SG G ++AL +F++M E ++P D Y G ++AC G +
Sbjct: 394 KVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALK 453
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + ++ + ++ + + G + +A + MP + V W +++SA
Sbjct: 454 HGRQLHAHL-VQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSWNAMISA 511
Query: 412 SKVH-HNLEIGEI 423
H H E E+
Sbjct: 512 LGQHGHGREALEL 524
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 322/572 (56%), Gaps = 14/572 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS---MDYACSIFRQID-EPGAF 97
+L K++H ++ GF + +V T L +G +DYA IF +
Sbjct: 234 NSLRHGKEIHGFCVRRGFVGDV-----VVGTGILDVYGKCQCIDYARRIFDMMGIVKNEV 288
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMF---ERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++ ++ +V EAL L+ ++ + + T + + CA L L G +H
Sbjct: 289 TWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLH 348
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
+ K GF DL V N+L++MY KC + A F +MD + S++AII+ + NG
Sbjct: 349 CYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSE 408
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L++F EM PE++ L SVL AC HL L G C+H I + ++ +L
Sbjct: 409 EGLRMFLEMQLSGI-NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNAL 467
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
IDMY KCG ++ +F M + ++++ MI +HG G EAL +F M EGL+PDD
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V ++ ++SACSH+GLV EG F+ M ++ I+P ++HY C+VDL+ RAG+ E I+
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIE 587
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
MP++ + VW +LLSA +V+ N+E+GE +K + ++ ++VLLSNMY+ RW D
Sbjct: 588 KMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDD 647
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD-RSHPAWDNIYEMIHQMEWQLKFEG 513
A++R +G +SPG S +E++ V+ F+ RSHP I + ++ ++K G
Sbjct: 648 AAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLG 707
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y + S V +DV+E+EK L HS+KLAIAF ++ LS I + +NLR+C DCHT K
Sbjct: 708 YQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIK 767
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS++ +R+I VRD RFH FKDG C+C D+W
Sbjct: 768 FISLVTKRDITVRDASRFHHFKDGICNCGDFW 799
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 51/429 (11%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLK---------WGFFWNPF-CASNLV 70
+L RL + C +L++C K+L K +H H+LK F PF +L
Sbjct: 2 QLRTRLSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLY 61
Query: 71 ATCALSHWGSMDYACSIFRQIDE--PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
C+ + A +F ++ +N LIR + +EEA+ LY +M G+
Sbjct: 62 IACS-----ELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
P+ FTFP + KAC+ L+ EG +IH + ++ E +++V +L++ Y KC ++ A +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176
Query: 189 FKQMDQKSVASWSAIIAAHA-SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
F +M ++ V +W+++I+ + G + E +L +M N+ P S +V VL A +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDV--SPNSSTIVGVLPAVAQVN 234
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD-KCQLTYSVMI 306
+L GK HG +R +V+V T ++D+Y KC C++ +F MM K ++T+S M+
Sbjct: 235 SLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMV 294
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+ +EAL +F ++L + DDV+ VLSA + A ++ +C + L
Sbjct: 295 GAYVVCDFMREALELFCQLL---MLKDDVI---VLSAVTLATVIR---VCANLTDLS--- 342
Query: 367 VPTVQH-----YGCVVDLM---------GRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
T H G V+DLM + G++ A+ M + ++ V + +++S
Sbjct: 343 TGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDL-RDAVSFTAIISGY 401
Query: 413 KVHHNLEIG 421
+ N E G
Sbjct: 402 VQNGNSEEG 410
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 317/555 (57%), Gaps = 33/555 (5%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F + E +I G+ +E +EA L++EM +R V T+ A+
Sbjct: 162 GRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNV----VTWTAMV 217
Query: 139 KACAK----------LQALKEGMQIHGHVFKVGFE--------CDLF---------VQNS 171
A+ + + E ++ +G+ LF V N
Sbjct: 218 SGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNE 277
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+I +G +V+ A +FK M ++ +WSA+I + G E L LF M E
Sbjct: 278 MIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALN 337
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
S L+SVLS C L +LD GK H L+R+ ++ V + LI MYVKCG L + +F
Sbjct: 338 FPS-LISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVF 396
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
K + ++ MI+G + HG G+EAL++F +M G+ PDDV ++GVLSACS++G V
Sbjct: 397 NRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVK 456
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EGL F+ MK +Y++ P ++HY C+VDL+GRA + EA++L++ MP++ + +VW +LL A
Sbjct: 457 EGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
+ H L++ E+A + L Q+ + YVLLSNMYA RW DV +R ++ ++ + + P
Sbjct: 517 CRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLP 576
Query: 472 GFSLVEVARKVYKFVSQD-RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEK 530
G S +EV +KV+ F D + HP I +M+ ++ L+ GY PD S VL DVDE+EK
Sbjct: 577 GCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEK 636
Query: 531 RERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKR 590
L HS+KLA+A+ L+ + +G PIR+ +NLR+C DCH+ KLI+ + REII+RD R
Sbjct: 637 THSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANR 696
Query: 591 FHRFKDGTCSCRDYW 605
FH FKDG CSC+DYW
Sbjct: 697 FHHFKDGHCSCKDYW 711
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 123/309 (39%), Gaps = 83/309 (26%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
+H G M A S+F + N +I GF E ++A ++ M ER DN T+
Sbjct: 252 THSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKER----DNGTWS 307
Query: 136 ALFK-----------------------------------ACAKLQALKEGMQIHGHVFKV 160
A+ K C L +L G Q+H + +
Sbjct: 308 AMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRS 367
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
F+ DL+V + LI MY KC + A +F + K V W+++I ++ +GL E L +F
Sbjct: 368 EFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVF 427
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+M + P++ + VLSAC++ G
Sbjct: 428 HDMCSSGV-PPDDVTFIGVLSACSYSGK-------------------------------- 454
Query: 281 CGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
+++GL LF M K Q+ Y+ ++ L Q EA+ + +M +EPD +
Sbjct: 455 ---VKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKM---PMEPDAI 508
Query: 336 VYVGVLSAC 344
V+ +L AC
Sbjct: 509 VWGALLGAC 517
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 146/339 (43%), Gaps = 23/339 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + + + +++RG+V+ + EA L+ M + V L
Sbjct: 100 GMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLL 159
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ A K +F + E D+ ++I Y + +++ A A+F +M +++V
Sbjct: 160 QEGRVDDARK--------LFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVV 211
Query: 199 SWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+W+A+++ +A NG KLF M NE W ++L TH G +
Sbjct: 212 TWTAMVSGYARNGKVDVARKLFEVMPERNEVSW-------TAMLLGYTHSGRMR----EA 260
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
SL + V+V +I + G ++K +F+ M ++ T+S MI G
Sbjct: 261 SSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYEL 320
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EAL +F M REGL + + VLS C ++ G ++ + + +
Sbjct: 321 EALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQL-VRSEFDQDLYVASVL 379
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + + G L A ++ P+ ++ V+W S+++ H
Sbjct: 380 ITMYVKCGNLVRAKQVFNRFPL-KDVVMWNSMITGYSQH 417
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 50/240 (20%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N+++ Y + + A +F++M Q++ SW+ +I+ H NG+ SE ++F M +
Sbjct: 59 NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDR--- 115
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
NV+ TS++ YV+ G + +
Sbjct: 116 -------------------------------------NVVSWTSMVRGYVRNGDVAEAER 138
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF M K ++++VM+ GL G+ +A +F M E D V ++ G
Sbjct: 139 LFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMM----PEKDVVAVTNMIGGYCEEGR 194
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
++E FD M V + +V R G + A +L + MP ++N+V W ++L
Sbjct: 195 LDEARALFDEMPKR-----NVVTWTAMVSGYARNGKVDVARKLFEVMP-ERNEVSWTAML 248
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/583 (33%), Positives = 322/583 (55%), Gaps = 13/583 (2%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMD 82
L L++L C + + VH + +K G A+ L+ + C S W S +
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNC--SDWHSTN 566
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
IFR + + + +I + + F++ L EM G++PD F ++ A
Sbjct: 567 ---QIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFA 623
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
++LK+G +HG+ + G E L V N+L+ MY C +E A +F + K + SW+
Sbjct: 624 GDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNT 683
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I ++ N +E LF +M + ++P + +L A + +L+ G+ H +R
Sbjct: 684 LIGGYSRNNFANESFSLFSDMLLQ--FKPNTVTMTCILPAVASISSLERGREIHAYALRR 741
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ +L+DMYVKCG L LF + K +++++MI+G MHG GK+A+++F
Sbjct: 742 GFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALF 801
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
+M G+EPD + +L AC H+GL EG F+ M+ EY+I P ++HY C+VDL+
Sbjct: 802 EQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSH 861
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
G L EA E I+SMPI+ + +W SLL ++H ++++ E A +F++ + YVLL
Sbjct: 862 TGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLL 921
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
+N+YA A+RW V K++ ++ +GL ++ G S +EV KV+ F++ +R+HP W+ I E +
Sbjct: 922 ANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFL 981
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+ +++ EG+ P L ++ E L GHS KLA+ F ++HL +G PIR+ +N
Sbjct: 982 DHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNS 1041
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++C+ CH K IS + REII+RD RFH F+ G CSCR ++
Sbjct: 1042 KVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSCRGHF 1084
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 20/322 (6%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-------GSMDYA 84
L++L C L K VH + +K G W+ + + S G M A
Sbjct: 303 LSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSA 362
Query: 85 CSIFRQIDEPGAFD-FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
+F + G +N ++ G+ K EFEE+L L+ +M E G+ PD L K
Sbjct: 363 RRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITC 422
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L ++G+ HG++ K+GF V N+LI+ Y K ++ A +F +M + SW+++
Sbjct: 423 LSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSV 482
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRP----EESILVSVLSACTHLGALDLGKCTHGSL 259
I+ SNGL SE ++LF M W + + L+SVL AC +G+ HG
Sbjct: 483 ISGCTSNGLNSEAIELFVRM-----WMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYS 537
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ + +L+DMY C +FR MA K ++++ MI+ G +
Sbjct: 538 VKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVA 597
Query: 320 SIFSEMLREGLEPDDVVYVGVL 341
+ EM+ +G++PD VL
Sbjct: 598 GLLQEMVLDGIKPDVFAVTSVL 619
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 177/373 (47%), Gaps = 28/373 (7%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ +L+ + K +F+E + L+ +M GV PD + K A L ++ EG IHG +
Sbjct: 166 WTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLE 225
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K+G V N+LI +Y +C +E A +F M + SW++ I+ + SNG +
Sbjct: 226 KLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVD 285
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN---------ISALNVI 269
LF +M +E ++L SVL AC LG +GK HG +++ S ++
Sbjct: 286 LFSKMWSEGTEISSVTVL-SVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEA 344
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQGKEALSIFSEMLRE 328
+ + L+ MYVKCG + +F M K + +++++ G A + +E+L +F +M
Sbjct: 345 LGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHEL 404
Query: 329 GLEPDDVVYVGVLS-----ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
G+ PD+ +L +C+ GLV G L +KL + V + ++ ++
Sbjct: 405 GITPDEHALSCLLKCITCLSCARDGLVAHGYL----VKLGFGTQCAVCN--ALISFYAKS 458
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHH-NLEIGEIAAKNLFQINSHHPSDYVLL 442
M+ A+ + MP Q+ + W S++S + N E E+ + Q H LL
Sbjct: 459 NMIDNAVLVFDRMP-HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQ--GHELDSTTLL 515
Query: 443 SNMY--ARAQRWY 453
S + AR+ W+
Sbjct: 516 SVLPACARSHYWF 528
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 13/323 (4%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L + + ++ E + +H + K G A+ L+A S G M+ A +F +
Sbjct: 205 LKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIAL--YSRCGCMEDAMQVFDSMHAR 262
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
A +N+ I G+ + A+ L+++M+ G E + T ++ ACA+L G +H
Sbjct: 263 DAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVH 322
Query: 155 GHVFKVGFECDL---------FVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWSAII 204
G+ K G DL + + L+ MY KC + A +F M K +V W+ I+
Sbjct: 323 GYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+A + E L LF +M +E P+E L +L T L G HG L++
Sbjct: 383 GGYAKAAEFEESLLLFEQM-HELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGF 441
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
V +LI Y K ++ + +F M + ++++ +ISG +G EA+ +F
Sbjct: 442 GTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVR 501
Query: 325 MLREGLEPDDVVYVGVLSACSHA 347
M +G E D + VL AC+ +
Sbjct: 502 MWMQGHELDSTTLLSVLPACARS 524
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 320/558 (57%), Gaps = 27/558 (4%)
Query: 62 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFL 118
NP S L+ ++ +D A IF + + + + G+ + +AL +
Sbjct: 166 NPKLLSKLITLFSVCR--RLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIV 223
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
Y +M +EP NF+ KAC L+ L+ G IH + K + D V N L+ +Y +
Sbjct: 224 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK---CWRPEESI 235
+ A +F M +++V +W+++I+ + E LF +M E W +
Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW----AT 339
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
L ++L AC+ + AL GK H ++++ +V + SL+DMY KCG +E +F +M
Sbjct: 340 LTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML 399
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
K ++++M++ A++G +E +++F M+ G+ PD + +V +LS CS GL GL
Sbjct: 400 TKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS 459
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F+RMK E+R+ P ++HY C+VD++GRAG + EA+++I++MP + + +W SLL++ ++H
Sbjct: 460 LFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLH 519
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N+ +GEIAAK LF + H+P +YV++SN+YA A+ W +V KIR M +G+ + G S
Sbjct: 520 GNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSW 579
Query: 476 VEVARKV--------YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
V+V K+ Y+F + D W + E I + GYSP+ S VL DVDE
Sbjct: 580 VQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEK-------SGYSPNTSVVLHDVDE 632
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+ K + GHS++LA ++LIH +G PIRI +NLR+C DCH++ K++S + R I++RD
Sbjct: 633 ETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRD 692
Query: 588 RKRFHRFKDGTCSCRDYW 605
KRFH F DG CSC+DYW
Sbjct: 693 TKRFHHFVDGICSCKDYW 710
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/568 (35%), Positives = 331/568 (58%), Gaps = 13/568 (2%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLV----ATCALSHWGSMDYACSIFRQIDEPGAFD 98
NL K+VHA+ ++ G N + L+ C + H G YA F + E
Sbjct: 364 NLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMG---YA---FECMHEKDLIS 417
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ T+I G+ + EA+ L+ ++ +G++ D ++ +AC+ L++ +IHG+VF
Sbjct: 418 WTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVF 477
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K D+ +QN+++N+YG+ ++A F+ + K + SW+++I NGL E L+
Sbjct: 478 KRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALE 536
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
LF + +P+ ++S LSA +L +L GK HG LIR L + +SL+DMY
Sbjct: 537 LFYSLKQTNI-QPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMY 595
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
CG +E +F + + + ++ MI+ MHG G EA+++F +M E + PD + ++
Sbjct: 596 ACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFL 655
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L ACSH+GL+ EG F+ MK Y++ P +HY C+VDL+ R+ L EA + ++SMPI
Sbjct: 656 ALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPI 715
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ + VW +LL A +H N E+GE+AAK L Q ++ + Y L+SN++A RW DV ++
Sbjct: 716 KPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEV 775
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL-KFEGYSPD 517
R M GL ++PG S +EV K++ F+++D+SHP D+IY + Q L K GY
Sbjct: 776 RLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQ 835
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
V +V E+EK + L HS++LA+ + L+ +G+ IRI +NLR+C+DCHT+ K+ S
Sbjct: 836 TKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASE 895
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +R ++VRD RFH F+ G CSC D+W
Sbjct: 896 VSQRALVVRDANRFHHFERGLCSCGDFW 923
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 169/341 (49%), Gaps = 11/341 (3%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNL 69
+LL T P P E L C+ + K L + +++HA +LK + F A+ L
Sbjct: 32 TLLSTHPLATPSRLEHAHSLLLDLCVAV----KALPQGQQLHARLLKSHL--SAFLATKL 85
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
+ GS+ A +F ++ E F +N ++ FV ++ EA+ LY EM GV
Sbjct: 86 LHM--YEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAI 143
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D TFP++ KAC L + G +IHG K GF +FV N+LI MYGKC + A +F
Sbjct: 144 DACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLF 203
Query: 190 K--QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
M+++ SW++II+AH + G E L LF M E V+ L
Sbjct: 204 DGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRM-QEVGVASNTYTFVAALQGVEDPS 262
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+ LG HG+ +++ +V V +LI MY KCG +E +F M + ++++ ++S
Sbjct: 263 FVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLS 322
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
GL + ++AL+ F +M +PD V + +++A +G
Sbjct: 323 GLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSG 363
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 203/421 (48%), Gaps = 14/421 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI- 91
++LK C L E + ++H +K GF F + L+A G + A +F I
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAM--YGKCGDLGGARVLFDGIM 207
Query: 92 -DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
++ +N++I V E + EAL L+ M E GV + +TF A + +K G
Sbjct: 208 MEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
M IHG K D++V N+LI MY KC ++E A +F M + SW+ +++ N
Sbjct: 268 MGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQN 327
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
L+ + L F +M N +P++ ++++++A G L GK H IRN N+ +
Sbjct: 328 ELYRDALNYFRDMQNS-AQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQI 386
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+LIDMY KC C++ F M +K ++++ +I+G A + EA+++F ++ +G+
Sbjct: 387 GNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGM 446
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D ++ VL ACS GL + + + R + + +V++ G G A
Sbjct: 447 DVDPMMIGSVLRACS--GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYAR 504
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+S I+ D+V W S+++ VH+ L + + + + P ++S + A A
Sbjct: 505 RAFES--IRSKDIVSWTSMITCC-VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561
Query: 450 Q 450
Sbjct: 562 N 562
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKK---VHAHVLKWGFF 60
T +H L + E + N++ ++ L NL KK +H +++ GFF
Sbjct: 523 TCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFF 582
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
AS+LV A G+++ + +F + + + ++I EA+ L+
Sbjct: 583 LEGPIASSLVDMYACC--GTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFK 640
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN--SLINMYGK 178
+M + V PD+ TF AL AC+ + EG + + K G++ + + ++ ++++ +
Sbjct: 641 KMTDENVIPDHITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLEPWPEHYACMVDLLSR 699
Query: 179 CEKVEFASAIFKQMDQK-SVASWSAIIAA 206
+E A + M K S W A++ A
Sbjct: 700 SNSLEEAYQFVRSMPIKPSSEVWCALLGA 728
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/527 (37%), Positives = 303/527 (57%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A ++F I ++ LI + + + E+A ++ M V P+ F+ +
Sbjct: 300 GYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVL 359
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ACA + L G QIH V K+G+E +LFV N+L+++Y KC +E + IF+ + +
Sbjct: 360 QACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEV 419
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+ II + +G + L +F EM + + SVL AC + ++ H
Sbjct: 420 SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVT-FSSVLRACANTASIKHTVQIHSL 478
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ ++ + IV SLID Y KCGC+ L +F + ++++ +ISG A+HG+ +A
Sbjct: 479 IEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDA 538
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F+ M + +P+DV +V +LS C GLVN+GL F+ M +++RI P++ HY C+V
Sbjct: 539 LELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVR 598
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L +AL+ I +P + +VWR+LLS+ VH N+ +G+ +A+ + +I +
Sbjct: 599 LLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETT 658
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSNMYA A VA +R M + G+ + G S VE+ +V+ F HP I
Sbjct: 659 YVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRII 718
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
M+ + + EGY PDI+ VL DVDE+EK L HS++LA+A+ L G PIRI
Sbjct: 719 NAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRI 778
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR C DCHT K+IS I +REI+VRD RFH F +G CSC DYW
Sbjct: 779 MKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDYW 825
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 183/388 (47%), Gaps = 12/388 (3%)
Query: 28 RLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFF--WNPFCASNLVATCALSHWGSMD 82
+L C +L+ C + + VHA V++ G + FCA+ L+ A G +
Sbjct: 44 KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYA--KLGPLA 101
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + E F TL++G+ FEEA L+ + G E ++F + K
Sbjct: 102 AARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLV 161
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ A IH K+G + + FV +SLI+ Y C V A +F + K +W+A
Sbjct: 162 AMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTA 221
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+++ ++ N + + L F +M +P +L SVL A L + LGK HG ++
Sbjct: 222 MVSCYSENDIPEDALNTFSKMRMAGA-KPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT 280
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V +L+DMY KCG +E +F ++ + +S +IS A Q ++A +F
Sbjct: 281 LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMF 340
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMG 381
M+R + P++ GVL AC++ ++ G + +KL Y V + ++D+
Sbjct: 341 LRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGN--ALMDVYA 398
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ + +LE+ +S+ N+V W +++
Sbjct: 399 KCRNMENSLEIFRSLR-DANEVSWNTII 425
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 317/525 (60%), Gaps = 4/525 (0%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT-FPALFKAC 141
YAC +F + ++ LI GFV EA L+ +M G+ + T + + C
Sbjct: 257 YACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVC 316
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A L L+ G Q+H + K G DL NSL++MY K + A+ +F ++ K S+
Sbjct: 317 ASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYG 376
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
A+++ + NG E +F +M + C +P+ + +VS++ AC+HL AL G+C+HGS+I
Sbjct: 377 ALLSGYVQNGKAEEAFLVFKKM--QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVI 434
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
AL + SLIDMY KCG ++ +F M + ++++ MI+G +HG GKEA +
Sbjct: 435 IRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATT 494
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M +G EPDDV ++ +++ACSH+GLV EG FD M +Y I+P ++HY C+VDL+
Sbjct: 495 LFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLL 554
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
R G L EA + IQSMP++ + VW +LL A ++H N+++G+ ++ + ++ ++V
Sbjct: 555 ARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFV 614
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+++ A R+ + A++R KG +SPG S +E+ ++ FV D+SHP +IY
Sbjct: 615 LLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYH 674
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ + +K GY D S VL+D++E+EK + L HS+KLAIAF ++ L++ I + +
Sbjct: 675 ELDNILIDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTK 734
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCHT K ++++ R IIVRD RFH FK+G CSC D+W
Sbjct: 735 NLRVCGDCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 170/375 (45%), Gaps = 47/375 (12%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F +I P A +N LIR + F A+ LY M V P+ +TFP +
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KAC+ L L G IH H VG DLFV +LI++Y +C + A+ +F +M + V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A++A +A++G++ + +M + RP S LVS+L GAL G H
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 259 LIRNISALN---VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+R N V++ T+L+DMY KC L +F M + ++T+S +I G + +
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 316 KEALSIFSEMLREGL------------------------------------EPDDVVYVG 339
EA ++F +ML EG+ D
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP-- 397
+LS + AGL+NE + FD + ++ I YG ++ + G EA + + M
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTI-----SYGALLSGYVQNGKAEEAFLVFKKMQAC 401
Query: 398 -IQQNDVVWRSLLSA 411
+Q + SL+ A
Sbjct: 402 NVQPDIATMVSLIPA 416
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 192/444 (43%), Gaps = 40/444 (9%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ 90
+LK C L + + +HAH G + F ++ L+ CA A ++F +
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCA-----RFGPAANVFAK 159
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
+ +N ++ G+ + A+ +M +RG + P+ T +L A+ AL +
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 150 GMQIHGHVFKVGF---ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
G +H + + E + + +L++MY KC+ + +A +F M ++ +WSA+I
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+E LF +M E + + S L C L L +G H L ++
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA 339
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ SL+ MY K G + + LF +A K ++Y ++SG +G+ +EA +F +M
Sbjct: 340 DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQ 399
Query: 327 REGLEPDDVVYVGVLSACSHA-----GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
++PD V ++ ACSH G + G + + LE I + ++D+
Sbjct: 400 ACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNS------LIDMYA 453
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH--HPSDY 439
+ G + + ++ MP ++ V W ++++ +H +G+ A + + P D
Sbjct: 454 KCGRIDLSRQVFDKMP-ARDIVSWNTMIAGYGIH---GLGKEATTLFLSMKNQGFEPDDV 509
Query: 440 VLL--------SNMYARAQRWYDV 455
+ S + + W+D
Sbjct: 510 TFICLIAACSHSGLVTEGKHWFDT 533
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 119/228 (52%), Gaps = 6/228 (2%)
Query: 29 LKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L + L+ C +L + + ++HA + K G + ++L++ A + G ++ A
Sbjct: 304 LSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKA--GLINEAT 361
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F +I + L+ G+V+ + EEA ++ +M V+PD T +L AC+ L
Sbjct: 362 MLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLA 421
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
AL+ G HG V G + + NSLI+MY KC +++ + +F +M + + SW+ +IA
Sbjct: 422 ALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIA 481
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ +GL E LF M N+ + P++ + +++AC+H G + GK
Sbjct: 482 GYGIHGLGKEATTLFLSMKNQG-FEPDDVTFICLIAACSHSGLVTEGK 528
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 318/562 (56%), Gaps = 10/562 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+++H+ + K GF N F + LV A CA M A +F Q+ E +N++I
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCA-----DMHSAVRVFDQMPERNLVSWNSMIV 319
Query: 105 GFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
GF ++ A+ ++ ++ E+ V P+ + ++ ACA + L G Q+HG V K G
Sbjct: 320 GFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLV 379
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+V NSL++MY KC + +F+ + + V +W+ ++ N + E F M
Sbjct: 380 PLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVM 439
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E P+E+ +VL + L AL G H +I+ N+ + SLI MY KCG
Sbjct: 440 RREGIL-PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGS 498
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L +F + D ++++ MIS +HG + + +F ML EG+EP V +V VLSA
Sbjct: 499 LVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 558
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSH G V EGL F+ MK + + P +HY C+VDL+GRAG L EA I+SMP++
Sbjct: 559 CSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPS 618
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
VW +LL A + + NL++G AA+ LF++ ++P +YVLL+NM R+ R + ++R M
Sbjct: 619 VWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMG 678
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
G+ + PG S ++V + F + DRSH + D IY+M+ ++E +K +GY + V
Sbjct: 679 VNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTN 738
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
++E+E+ + L HS+KLA+AF L+ L SPIRI +NLR C CHT KL S I++REI
Sbjct: 739 HLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREI 798
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFHRF DG CSC DYW
Sbjct: 799 IVRDINRFHRFADGFCSCGDYW 820
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 197/377 (52%), Gaps = 8/377 (2%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE--PGAFDF 99
++L+ ++H ++ + PF +NL+ A G ++ A +F +
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKC--GCLNQALLLFSITHHHFKTIVTW 213
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
+LI +AL L+N+M G P+ FTF ++ A A + G Q+H + K
Sbjct: 214 TSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHK 273
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
GF+ ++FV +L++MY KC + A +F QM ++++ SW+++I N L+ + +
Sbjct: 274 HGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGV 333
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F ++ EK P E + SVLSAC ++G L+ G+ HG +++ V SL+DMY
Sbjct: 334 FKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYF 393
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KC ++G+ LF+ + D+ +T++V++ G + + +EA + F M REG+ PD+ +
Sbjct: 394 KCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFST 453
Query: 340 VLSACSHAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
VL + + +++G D+ +KL Y V + G ++ + + G L +A ++ + +
Sbjct: 454 VLHSSASLAALHQGTAIHDQIIKLGY--VKNMCILGSLITMYAKCGSLVDAYQVFEGIE- 510
Query: 399 QQNDVVWRSLLSASKVH 415
N + W +++SA ++H
Sbjct: 511 DHNVISWTAMISAYQLH 527
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/572 (35%), Positives = 322/572 (56%), Gaps = 40/572 (6%)
Query: 73 CALSHWGSMDYACSIFRQID----EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
C + G ++ I +++ EP +N ++ GF + +EA+ ++ +M G
Sbjct: 190 CGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFC 249
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
PD T ++ + + L G QIHG+V K G D V +++++MYGK V +
Sbjct: 250 PDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKL 309
Query: 189 FKQMD-----------------------------------QKSVASWSAIIAAHASNGLW 213
F + + + +V SW++IIA A NG
Sbjct: 310 FDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKD 369
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+LF EM +P + S+L AC ++ AL G+ THG +R +V V ++
Sbjct: 370 IEALELFREMQVAGV-KPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSA 428
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG ++ +F MM K + ++ +++G +MHG+ KE +SIF ++R L+PD
Sbjct: 429 LIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ + +LSAC GL +EG F+ M EY I P ++HY C+V+L+GRAG L EA +LI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ +P + + VW +LL++ ++ +N+++ EIAA+ LF + +P YVL+SN+YA W
Sbjct: 549 KEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWT 608
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+V IR +M S GL ++PG S ++V KVY ++ D+SHP D I E + ++ +++ G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSG 668
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P++ L+DV+E E+ + L GHS+KLA+ F L++ G+P+++ +NLR+C DCH K
Sbjct: 669 HRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS REI +RD RFH FKDG CSC D+W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 194/436 (44%), Gaps = 73/436 (16%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+ HA +LK G + + ++ L+A+ S++ + A I + I +P + F++LI K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIAS--YSNYNCFNDADLILQSIPDPTVYSFSSLIYALTK 93
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
F +++ +++ MF G+ PD P LFK CA+L A K G QIH G + D FV
Sbjct: 94 AKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFV 153
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN---- 224
Q SL +MY +C ++ A +F +M +K V + SA++ +A G E +++ EM
Sbjct: 154 QGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGI 213
Query: 225 --NEKCWR----------------------------PEESILVSVLSACTHLGALDLGKC 254
N W P++ + SVL + L++G+
Sbjct: 214 EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQ 273
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCG-------------CLEKGLC------------ 289
HG +I+ + V ++++DMY K G +E G+C
Sbjct: 274 IHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGL 333
Query: 290 ------LFRMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
+F + ++ ++++ +I+G A +G+ EAL +F EM G++P+ V
Sbjct: 334 VDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPS 393
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L AC + + G + ++ V ++D+ + G + + + MP
Sbjct: 394 MLPACGNIAALGHGRSTHG-FAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMP-T 451
Query: 400 QNDVVWRSLLSASKVH 415
+N V W SL++ +H
Sbjct: 452 KNLVCWNSLMNGYSMH 467
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 331/578 (57%), Gaps = 13/578 (2%)
Query: 36 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T L C + ++E + H + K+G + + S LV S ++ A + +
Sbjct: 122 TALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHM--YSRCSHVELALQVLDTV- 178
Query: 93 EPG-----AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
PG F +N+++ V+ EEA+ + M + V D+ T+ + CA+++ L
Sbjct: 179 -PGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDL 237
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ G+++H + + G D FV + LI+MYGKC +V A +F + ++V W+A++ A+
Sbjct: 238 QLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAY 297
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
NG + E L LF M+ E P E +L+AC + AL G H + + +
Sbjct: 298 LQNGYFEESLNLFTCMDREGTL-PNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNH 356
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
VIV +LI+MY K G ++ +F M + +T++ MI G + HG GK+AL +F +M+
Sbjct: 357 VIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVS 416
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
P+ V ++GVLSA SH GLV EG + + ++I P ++HY C+V L+ RAG+L
Sbjct: 417 AEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLD 476
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
EA +++ ++ + V WR+LL+A VH N ++G A+++ Q++ H Y LLSNMYA
Sbjct: 477 EAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYA 536
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
+A+RW V IR M + + + PG S +++ ++ F+S+ +HP IY+ + Q+
Sbjct: 537 KARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLA 596
Query: 508 QLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCND 567
+K GY P+I+ VL DV++++K L HS+KLA+A+ L+ + +PIRI +NLRMC+D
Sbjct: 597 LIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDD 656
Query: 568 CHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
CHT KLIS + R IIVRD RFH F+DG+C+C D+W
Sbjct: 657 CHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 170/345 (49%), Gaps = 10/345 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPAL 137
G + A ++F + +N L+ G++ E L L+ M + P+ + F
Sbjct: 64 GQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTA 123
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
AC+ +KEGMQ HG +FK G C +V+++L++MY +C VE A + + + V
Sbjct: 124 LSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHV 183
Query: 198 A---SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
S+++++ A +G E +++ M +E C + V V+ C + L LG
Sbjct: 184 NDIFSYNSVLNALVESGRGEEAVEVLRRMVDE-CVAWDHVTYVGVMGLCAQIRDLQLGLR 242
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
H L+R + V + LIDMY KCG + +F + ++ + ++ +++ +G
Sbjct: 243 VHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGY 302
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHY 373
+E+L++F+ M REG P++ + +L+AC+ + G L R+ KL ++ V++
Sbjct: 303 FEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRN- 361
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNL 418
++++ ++G + + + M I ++ + W +++ HH L
Sbjct: 362 -ALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYS-HHGL 403
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 128/256 (50%), Gaps = 27/256 (10%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
NSL+++Y KC ++ A +F M ++V SW+ ++A + G E L LF M + +
Sbjct: 54 NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P E + + LSAC+H G + G HG L + + V+++L+ MY +C +E L
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173
Query: 290 LFRMMADKCQ---LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS- 345
+ + + +Y+ +++ L G+G+EA+ + M+ E + D V YVGV+ C+
Sbjct: 174 VLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQ 233
Query: 346 ----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
HA L+ GL+ FD V ++ ++D+ G+ G + A +
Sbjct: 234 IRDLQLGLRVHARLLRGGLM-FD------EFVGSM-----LIDMYGKCGEVLNARNVFDG 281
Query: 396 MPIQQNDVVWRSLLSA 411
+ +N VVW +L++A
Sbjct: 282 LQ-NRNVVVWTALMTA 296
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 308/564 (54%), Gaps = 40/564 (7%)
Query: 79 GSMDYACSIFRQIDEPGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
G + A S F +ID G FD +N +I G+V+ EA L+ M + + PD FTF +
Sbjct: 244 GDVHAARSAFEEID--GEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTS 301
Query: 137 LFKACAKLQALKEGMQIHGHVFKVG----FECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
L ACA G +HG ++ E L V N+L+ +Y K K+ A+ IF M
Sbjct: 302 LLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM 361
Query: 193 DQKSVASWSAI-------------------------------IAAHASNGLWSECLKLFG 221
K V SW+ I ++ + GL + LKLF
Sbjct: 362 TLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFN 421
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M +E +P + ++AC LGAL GK H L++ + +L+ MY +C
Sbjct: 422 QMRSEDV-KPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARC 480
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ +F +M + ++++ MIS L HG G+EAL +F +M+ +G+ PD + ++ +L
Sbjct: 481 GAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTIL 540
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+AC+HAGLV++G F+ M+ ++ I P HY ++DL+GRAG +GEA +LI++MP +
Sbjct: 541 TACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPT 600
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W ++LS +++ ++E+G AA LF++ H Y+LLSN Y+ A RW D A++R
Sbjct: 601 PAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKL 660
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ + PG S +EV KV+ F+ D HP +Y + + +++ GY PD
Sbjct: 661 MRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFA 720
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L+D+ EK L HS++LA++F L+ L G+ + + +NL++C DCHT +S R
Sbjct: 721 LQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGR 780
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD +RFH FKDG CSC +YW
Sbjct: 781 EIVVRDVRRFHHFKDGECSCGNYW 804
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 201/494 (40%), Gaps = 94/494 (19%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLTI-LKTCKNLEEFKKVHAHVLKWGFFWNPFC 65
LH LL P P L LRL L+ L T L P
Sbjct: 44 LHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRADP------------GPVA 91
Query: 66 ASNLVATCALSHWGSMDYACSIFRQID--EPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
A++LV+ A++ G + + + F + N +I F + A+ ++ +
Sbjct: 92 ATSLVSAYAVA--GRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLL 149
Query: 124 --ERGVEPDNFTFPALFKACAKLQ--ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
+ + PD+++F +L A ++ A+ Q+H V K+G L V N+LI +Y KC
Sbjct: 150 ASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKC 209
Query: 180 E----------------------------------KVEFASAIFKQMDQKSVASWSAIIA 205
+ V A + F+++D + W+A+I+
Sbjct: 210 DAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMIS 269
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR---- 261
+ +G+ +E +LF M +++ P+E S+LSAC + G GK HG IR
Sbjct: 270 GYVQSGMCAEAFELFRRMVSKRI-PPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPD 328
Query: 262 -------------------------------NISALNVIVETSLIDMYVKCGCLEKGLCL 290
+++ +V+ +++ Y++ GCL+ +
Sbjct: 329 FVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARI 388
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F+ M K +L++ VM+SG G ++AL +F++M E ++P D Y G ++AC G +
Sbjct: 389 FKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGAL 448
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
G + ++ + ++ + R G + +A + MP + V W +++S
Sbjct: 449 KHGKQLHAHL-VQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMIS 506
Query: 411 ASKVH-HNLEIGEI 423
A H H E E+
Sbjct: 507 ALGQHGHGREALEL 520
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/549 (37%), Positives = 301/549 (54%), Gaps = 32/549 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A IF ++ E +NT+I G+ + E EA +FE D FT+ A+ +
Sbjct: 142 ARGIFDRMPERDEVSWNTMISGYAQNGELLEA----QRLFEESPVRDVFTWTAMVSGYVQ 197
Query: 144 LQALKEGMQIHG----------HVFKVGF-ECDLFVQ----------------NSLINMY 176
L E ++ + G+ +C Q N++I Y
Sbjct: 198 NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGY 257
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
+ + A F +M Q+ SW+AIIA +A +G E L LF EM + R S
Sbjct: 258 AQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE-RLNRSTF 316
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
S LS C + AL+LGK HG +++ V +L+ MY KCG ++ +F + +
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 376
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
K ++++ MI+G A HG GKEAL +F M + G+ PDDV VGVLSACSH GLV++G
Sbjct: 377 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 436
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F M +Y I +HY C++DL+GRAG L +A L+++MP + + W +LL AS++H
Sbjct: 437 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
N E+GE AAK +F++ + YVLLSN+YA + RW DV ++R M +G+ + PG+S V
Sbjct: 497 NTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 556
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKG 536
EV K++ F D HP D IY + +++ ++K EGY VL DV+E+EK LK
Sbjct: 557 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 616
Query: 537 HSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKD 596
HS+KLA+AF ++ + G PIR+ +NLR+C DCH K IS I R II+RD RFH F
Sbjct: 617 HSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNG 676
Query: 597 GTCSCRDYW 605
G CSC DYW
Sbjct: 677 GQCSCGDYW 685
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 153/364 (42%), Gaps = 58/364 (15%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F Q+ E +N ++ G+ + +EA +++EM + ++ ++ + A +
Sbjct: 52 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGR 107
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+++ ++ F+ + +L N ++ Y K ++ A IF +M ++ SW+ +I+
Sbjct: 108 IEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 163
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESIL--VSVLSACTHLGALDLG-KCTHGSLIRNI 263
+A NG E +LF E P + +++S G LD + G +N
Sbjct: 164 YAQNGELLEAQRLFEE-------SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNS 216
Query: 264 SALNVIVE--------------------------TSLIDMYVKCGCLEKGLCLFRMMADK 297
+ N I+ ++I Y + G + + F M +
Sbjct: 217 VSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR 276
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ +I+G A G G+EAL +F EM R+G + + LS C+ + G
Sbjct: 277 DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELG---- 332
Query: 358 DRMKLEYRIVPTVQHYGCVVD-----LMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
++ R+V GC V + + G + +A + + I++ +VV W ++++
Sbjct: 333 --KQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG--IEEKEVVSWNTMIAG 388
Query: 412 SKVH 415
H
Sbjct: 389 YARH 392
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSA 242
A +F QM ++ V SW+A+++ +A NG E ++F EM N W +L+A
Sbjct: 49 ARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWN-------GMLAA 101
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
G ++ + L + + +I ++ YVK L +F M ++ ++++
Sbjct: 102 YVQNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW 157
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEP--DDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+ MISG A +G+ EA +F E P D + ++S G+++E FD M
Sbjct: 158 NTMISGYAQNGELLEAQRLFEE------SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM 211
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ + + ++ + + +A EL ++MP QN W ++++ +
Sbjct: 212 PEKNSV-----SWNAIIAGYVQCKRMDQARELFEAMPC-QNVSSWNTMITGYA-----QN 260
Query: 421 GEIA-AKNLF 429
G+IA A+N F
Sbjct: 261 GDIAQARNFF 270
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/601 (34%), Positives = 337/601 (56%), Gaps = 9/601 (1%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP 63
T ++ +L E P L L +T ++L++ + +HAH+ F +
Sbjct: 45 TGIIRDTLDSVDARELAATPRLYHSL-----ITACARYRSLDDARAIHAHLAGSQFAGSV 99
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
F ++L+ G++ A +F + + +LI G+ + +EAL L M
Sbjct: 100 FLDNSLIHL--YCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGML 157
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
+P+ FTF +L KA + G QIH K + D++V ++L++MY +C +++
Sbjct: 158 RGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMD 217
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A A+F Q++ K+ SW+A+IA A G L +F EM + SV SA
Sbjct: 218 MAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNG-FEATHFTYSSVFSAI 276
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+GAL+ GK H +I++ L+ V +++DMY K G + +F + K +T++
Sbjct: 277 AGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWN 336
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
M++ A +G G+EA++ F EM + G+ + + ++ +L+ACSH GLV EG FD MK E
Sbjct: 337 SMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMK-E 395
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y + P + HY VVDL+GRAG+L +AL I MP++ VW +LL + ++H N +IG+
Sbjct: 396 YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQF 455
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AA ++F+++ VLL N+YA +W A++R M + G+ + P S VE+ V+
Sbjct: 456 AADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVH 515
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
FV+ D +HP + IY+ ++ Q++ GY P+ VL VDE E++ +L+ HS+K+A+
Sbjct: 516 MFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIAL 575
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AFALI++ G+ IRI +N+R+C DCH+ + IS +++REI+VRD RFH F G+CSC D
Sbjct: 576 AFALINMPLGATIRIMKNIRICGDCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGD 635
Query: 604 Y 604
Y
Sbjct: 636 Y 636
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/528 (38%), Positives = 313/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F Q+ ++++I G + E+AL L+ +M GV +
Sbjct: 195 GRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGL 254
Query: 139 KACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
A AK+ A + G+QIH VFK+G + D FV SL+ Y C+++E A +F ++ KSV
Sbjct: 255 SAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSV 314
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
W+A++ + N E L++FGEM P ES S L++C L ++ GK H
Sbjct: 315 VIWTALLTGYGLNDKHREALEVFGEMMRIDV-VPNESSFTSALNSCCGLEDIERGKVIHA 373
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ ++ V SL+ MY KCG + + +F+ + +K ++++ +I G A HG G
Sbjct: 374 AAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMW 433
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
AL++F++MLREG++PD + G+LSACSH+G++ + F + + T++HY +V
Sbjct: 434 ALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMV 493
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
D++GR G L EA ++ SMP++ N +VW +LLSA + H NL++ + AA +F+I +
Sbjct: 494 DVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSA 553
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLSN+YA + RW +VA IR +M G+ + PG S + + + +KF+S DRSHP +
Sbjct: 554 AYVLLSNLYASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEK 613
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY+ + + +LK GY PD L DV+ ++K E L HS++LAIAF L+ +GS I
Sbjct: 614 IYQKLEWLGVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAIT 673
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ +NLR+C DCH KL++ I +REI+VRD RFH FK+G CSC DYW
Sbjct: 674 VMKNLRVCGDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 155/337 (45%), Gaps = 18/337 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +FR+I +N++I+G + + A L++EM R V ++ L +
Sbjct: 105 AIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTV----VSWTTLVDGLLR 160
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L ++E + + + + D+ N++I+ Y +V+ A +F QM + V SWS++
Sbjct: 161 LGIVQEAETLFWAMEPM--DRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSM 218
Query: 204 IAAHASNGLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR- 261
IA NG + L LF +M + C +LV LSA + A +G H S+ +
Sbjct: 219 IAGLDHNGKSEQALVLFRDMVASGVCL--SSGVLVCGLSAAAKIPAWRVGIQIHCSVFKL 276
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ V SL+ Y C +E +F + K + ++ +++G ++ + +EAL +
Sbjct: 277 GDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEV 336
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVD 378
F EM+R + P++ + L++C + G + +M LE G +V
Sbjct: 337 FGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVG----GSLVV 392
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + G + +A+ + + + ++N V W S++ H
Sbjct: 393 MYSKCGYVSDAVYVFKGIN-EKNVVSWNSVIVGCAQH 428
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 327/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK L F K VH +LK + +P L+ + G M A +F ++
Sbjct: 252 TALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQL--YTQLGDMSDAFKVFNEMP 309
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ ++ +I F + +A+ ++ M E V P+ FT ++ CA + G Q
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG V KVGF+ D++V N+LI++Y KCEK++ A +F ++ K+V SW+ +I + + G
Sbjct: 370 LHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGE 429
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L +F E + E S L AC L +++LG HG I+ +A V V
Sbjct: 430 GGKALNMFREALRNQV-SVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSN 488
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SLIDMY KCG ++ +F M +++ +ISG + HG G++AL IF M +P
Sbjct: 489 SLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKP 548
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + ++GVLS CS+AGL+++G CF+ M ++ I P ++HY C+V L GR+G L +A+ L
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNL 608
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ +P + + ++WR++LSAS +N E +A+ + +IN + YVLLSNMYA A++W
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQW 668
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VA IR M KG+ + PG S +E V+ F HP I M+ + +
Sbjct: 669 ANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRA 728
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL-SQGSPIRIARNLRMCNDCHTY 571
GY PD + VL D+D++EK +RL HS++LA+A+ L+ + S + I I +NLR+C+DCH+
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K+IS I +R++++RD RFH F G CSC D+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 7/367 (1%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H+ ++K G+ N F + L+ A S GS+D A S+F I + ++ +V+
Sbjct: 168 LHSPIVKLGYDSNAFVGAALIN--AYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVEN 225
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
FE++L L + M G P+N+TF KA L A +HG + K +E D V
Sbjct: 226 GCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG 285
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
L+ +Y + + A +F +M + V WS +IA NG ++ + +F M E
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REGFV 344
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P E L S+L+ C LG+ HG +++ L+V V +LID+Y KC ++ +
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVK 404
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF ++ K ++++ +I G G+G +AL++F E LR + +V + L AC+
Sbjct: 405 LFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSL 408
+ G+ + ++ V ++D+ + G + A + M + DV W +L
Sbjct: 465 MELGVQVHG-LAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEM--ETIDVASWNAL 521
Query: 409 LSASKVH 415
+S H
Sbjct: 522 ISGYSTH 528
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 12/314 (3%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+L+ C + K +H +LK G + F A+N++ + D A ++F ++
Sbjct: 54 TMLRRCIRKNDSVSAKAIHCDILKKGSCLDLF-ATNILLNAYVKAGFDKD-ALNLFDEMP 111
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + TL +G+ ++ + LY+ + G E + F + K L +
Sbjct: 112 ERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWW 167
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+G++ + FV +LIN Y C V+ A ++F+ + K + W+ I++ + NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ + L+L M + + P + L A LGA K HG +++ L+ V
Sbjct: 228 FEDSLQLLSRMGMDG-FMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGV 286
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LE 331
L+ +Y + G + +F M + +S MI+ +G +A+ IF M REG +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REGFVV 345
Query: 332 PDDVVYVGVLSACS 345
P++ +L+ C+
Sbjct: 346 PNEFTLSSILNGCA 359
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 16/286 (5%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D+ + + + C + IH + K G DLF N L+N Y K + A +F
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 190 KQMDQKSVASWSAIIAAHASN---GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+M +++ S+ + +A GL+S + E+N + S L L
Sbjct: 108 DEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGHELN--------PHVFTSFLKLFVSL 159
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
++ H +++ N V +LI+ Y CG ++ +F + K + ++ ++
Sbjct: 160 DKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIV 219
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYR 365
S +G +++L + S M +G P++ + L A G + + +K Y
Sbjct: 220 SCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYE 279
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ P V ++ L + G + +A ++ MP +NDVV S + A
Sbjct: 280 LDPRVGV--GLLQLYTQLGDMSDAFKVFNEMP--KNDVVPWSFMIA 321
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/580 (36%), Positives = 315/580 (54%), Gaps = 16/580 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFW-NPFCASNLVATCALSHWGSMDYACSIF-RQIDE 93
++L +L + + HA +L G +P + + ALS + + R +
Sbjct: 12 SLLPRLASLRHYLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLRSLPT 71
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV--EPDNFTFPALFKACAKLQALKEGM 151
P D N +RG +L L + PD + KA A+ +
Sbjct: 72 PATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDAHTTV 131
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
Q+H V ++G D+ + +L++ Y KC + A +F +M + VA+W++++A A
Sbjct: 132 QLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGLAQGT 191
Query: 212 LWSECLKLFGEMNNE-----KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ L LF + N P E +V+ LSAC +G L G H R
Sbjct: 192 EPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDR 251
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMA--DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
NV V SLIDMY KCG L + L +F + D+ ++Y+ I +MHG G +AL +F E
Sbjct: 252 NVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDE 311
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M +EPD V Y+ VL C+H+GLV++GL F+ M R+ P ++HYG +VDL+GRAG
Sbjct: 312 MPTR-IEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAG 366
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA + + SMP + V+W++LL A+K+H +E+ E+AA L ++ S+ DYVLLSN
Sbjct: 367 RLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSN 426
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA RW DV ++R M S + + PGFS E+ ++KF++ D+ HP W IY +
Sbjct: 427 VYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRALED 486
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ ++ GY P+ S VL D+ E+EK+ L HS+KLAIAF LI G +R+ +NLR+
Sbjct: 487 IVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKNLRI 546
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
C DCH KLIS Y R I++RDR RFHRF+DG CSCRDY
Sbjct: 547 CGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDY 586
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 321/573 (56%), Gaps = 41/573 (7%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L+ + +VH ++K G N F + LVA G + A + Q+
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAM--YGKCGCLREARKVLDQMPY 200
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+++ G+ + +F++AL + EM + D T +L
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL---------------- 244
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
S + Y E V++ +F++M +K++ SW+ +IA + +N +
Sbjct: 245 -----------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 214 SECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E + LF +M E+C +P+ + S+L AC L AL LG+ H + + N+++E
Sbjct: 288 NEAVSLFLQM--EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLEN 345
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCGCLE+ +F M + ++++ M+S GQG +A+++F++ML G P
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP 405
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +V VLSACSH GL+++G F M +Y IVP ++H+ C+VDL GRAG + EA
Sbjct: 406 DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSF 465
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ MP++ N+ VW +LLSA +VH ++IG +AA LFQ+ YVLLSN+YA+A W
Sbjct: 466 IKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMW 525
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DV +R M G+ + PG S VE+ +V+ F++ D+ HP NIY + + ++K
Sbjct: 526 KDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKEL 585
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P L DV+ ++K L HS+KLAI FA+++ QG+PIRI +NLR+C DCH
Sbjct: 586 GYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAI 645
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I R IIVRD RFH F +G CSC DYW
Sbjct: 646 KLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 182/386 (47%), Gaps = 43/386 (11%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAH-VLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
++ C IL ++ K+H+ V+ +P A L+ A S G A I
Sbjct: 36 FSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMR--AYSAQGETSVARYI 93
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + E FN +IR +V + EAL ++ M PD++TFP + KAC+ L L
Sbjct: 94 FDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNL 153
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ G+Q+H + KVG + +LF+ N+L+ MYGKC + A + QM + V SW++++A +
Sbjct: 154 RVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGY 213
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A +G + + L++ C + +L+L G++ S
Sbjct: 214 AQSGQFDDALEI-----------------------CKEMDSLNLNH-DAGTM---ASLSP 246
Query: 268 VIVETSLIDM-YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V+ TSL ++ Y+ +F M K ++++VMI+ + EA+S+F +M
Sbjct: 247 VVCYTSLENVQYIH--------NMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME 298
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G++PD V +L AC + G ++ + + P + ++D+ + G L
Sbjct: 299 ECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIE-KGNLQPNLLLENALLDMYAKCGCL 357
Query: 387 GEALELIQSMPIQQNDVV-WRSLLSA 411
EA ++ M ++ DVV W S++SA
Sbjct: 358 EEARDVFDKMRLR--DVVSWTSMMSA 381
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C +L +++H ++ K N + L+ A G ++ A +F ++
Sbjct: 311 SLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYA--KCGCLEEARDVFDKMR 368
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +++ + + + +A+ L+ +M + G PD+ F ++ AC+ L +G
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR- 427
Query: 153 IHGHVFKVGFECDLFVQN-----SLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
H F++ E V +++++G+ +VE A + KQM + + W A+++A
Sbjct: 428 ---HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/613 (33%), Positives = 334/613 (54%), Gaps = 73/613 (11%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F WN + A + GS+ + F ++ + +NT I GF +E+L L
Sbjct: 90 FSWNALLS-------AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLEL 142
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ M G EP +T ++ A A+L L+ G QIHG + F ++F+ N+L +MY K
Sbjct: 143 FKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAK 202
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN-------------- 224
C ++E A +F + +K++ SW+ +I+ +A NG +C+ L +M
Sbjct: 203 CGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI 262
Query: 225 --------------------NEK---CW-----------RPEESILV------------- 237
EK CW R E+++L+
Sbjct: 263 IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDS 322
Query: 238 ----SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
SV+S+C L +L G+ HG I N++V ++LIDMY KCG ++ +F +
Sbjct: 323 YTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNL 382
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + ++++ MI G A +G K+AL +F ML++ +PD+V ++G+LSAC H + +G
Sbjct: 383 MPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQG 442
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
FD + ++ + PT+ HY C+V+L+GR G + +A+ LI++M + ++W +LLS
Sbjct: 443 QEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICS 502
Query: 414 VHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGF 473
++ E+AA++LF+++ Y++LSNMYA RW DVA +R M SK + + GF
Sbjct: 503 TKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGF 562
Query: 474 SLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER 533
S +E+ +V++F S+DR+HP ++IYE ++ + +L+ EG++P+ + VL DV EDEK +
Sbjct: 563 SWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKS 622
Query: 534 LKGHSQKLAIAFALIHLSQG-SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
+ HS+KLA+AF LI G SPIRI +N+R+CNDCH + K S I R+II+RD RFH
Sbjct: 623 ICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFH 682
Query: 593 RFKDGTCSCRDYW 605
F G CSC D W
Sbjct: 683 HFSTGKCSCNDNW 695
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFE-CDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ L C + + + ++ H+ F+ D F+ N L+++Y K K+ A +F +M
Sbjct: 25 YTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM 84
Query: 193 DQKSVASWSAIIAAHASNGLW-------------------------------SECLKLFG 221
++ SW+A+++A+A +G E L+LF
Sbjct: 85 LKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFK 144
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
M E + P E +VS+L+A L L GK HGS+I NV + +L DMY KC
Sbjct: 145 RMQREG-FEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC 203
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E+ LF + K +++++MISG A +GQ ++ + + +M G PD V ++
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTII 263
Query: 342 SACSHAGLVNEGLLCFDRMK 361
+A G V+E F K
Sbjct: 264 AAYCQCGRVDEARRVFSEFK 283
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/561 (34%), Positives = 304/561 (54%), Gaps = 34/561 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A S+F ++D +N +I G+V EA L+ M V D FTF ++
Sbjct: 242 GDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVL 301
Query: 139 KACAKLQALKEGMQIHGHVFKV--GF--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
ACA G +HG + ++ F E L V N+L+ +Y KC + A IF M
Sbjct: 302 SACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKS 361
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCW----------------------- 229
K V SW+ I++ + + + +++F EM NE W
Sbjct: 362 KDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRM 421
Query: 230 -----RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+P + +SAC LG+L GK HG L++ + +LI MY +CG +
Sbjct: 422 RAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAV 481
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++ +F +M + ++++ MIS L HG G+EAL +F M+ EG+ PD + ++ VL+AC
Sbjct: 482 KEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTAC 541
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+H+GLV+EG F+ MK ++ I+P HY ++DL+GRAG +GEA +LI++MP + +
Sbjct: 542 NHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI 601
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W ++LS + ++E+G AA LF++ H Y+LLSN Y+ A RW D A++R M
Sbjct: 602 WEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 661
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+G+ + PG S +E KV+ FV D HP +Y+ + + +++ GY PD VL D
Sbjct: 662 RGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHD 721
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
++ +K L HS++LA+ F L+ L G+ + + +NLR+C+DCH +S REI+
Sbjct: 722 MEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICDDCHAVMMFMSKAVGREIV 781
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRD +RFH FKDG CSC +YW
Sbjct: 782 VRDVRRFHHFKDGECSCGNYW 802
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 197/493 (39%), Gaps = 93/493 (18%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLT-ILKTCKNLEEFKKVHAHVLKWGFFWNPFC 65
LH LL + P P L LRL L+ L L P
Sbjct: 43 LHARLLTSALLHAPPHPHLTLRLIHLYTLSGDLPAAATLFRADPC------------PVA 90
Query: 66 ASNLVATCALSHWGSMDYACSIFRQIDEP--GAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
A++LVA A + G + A S F + + N +I + + A+ ++ +
Sbjct: 91 ATSLVAAYAAA--GRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148
Query: 124 ERG-VEPDNFTFPALFKACAKLQ--ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
G + PD+++F AL A L +++ Q+ V K G L V N+L+ +Y KCE
Sbjct: 149 ASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCE 208
Query: 181 KVE----------------------------------FASAIFKQMDQKSVASWSAIIAA 206
+E A ++F+++D K W+A+I+
Sbjct: 209 ALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISG 268
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR----- 261
+ +G+ E +LF M E+ +E SVLSAC + G GK HG + R
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPL-DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNF 327
Query: 262 ------------------------------NISALNVIVETSLIDMYVKCGCLEKGLCLF 291
N+ + +V+ +++ YV+ CL+K + +F
Sbjct: 328 VPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M K +L++ VM+SG G ++AL +F+ M E ++P D Y G +SAC G +
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLK 447
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + ++ + ++ + R G + EA + MP + V W +++SA
Sbjct: 448 HGKQLHGHL-VQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP-NIDSVSWNAMISA 505
Query: 412 SKVH-HNLEIGEI 423
H H E E+
Sbjct: 506 LGQHGHGREALEL 518
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 18 EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHV-LKWGFFWNPFCASNLVATCALS 76
+P PE L + +T+ C N+ +++ ++ K WN + + ++C
Sbjct: 324 QPNFVPEAALPVN-NALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSC--- 379
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+D A +F ++ + ++ G+V E+AL L+N M V+P ++T+
Sbjct: 380 ----LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAG 435
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
AC +L +LK G Q+HGH+ ++GFE N+LI MY +C V+ A+ +F M
Sbjct: 436 AISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNID 495
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+A+I+A +G E L+LF M E + P+ ++VL+AC H G +D G
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIY-PDRISFLTVLTACNHSGLVDEGFQYF 554
Query: 257 GSLIRNISALNVIVE-TSLIDMYVKCGCLEKGLCLFRMM 294
S+ R+ + T LID+ + G + + L + M
Sbjct: 555 ESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTM 593
>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/567 (37%), Positives = 335/567 (59%), Gaps = 23/567 (4%)
Query: 51 HAHVLKWGFFWNPFCASNLVATCA--LSHWGSM----------DYACSIFRQIDEPGAFD 98
HAHVLK G + F + ++ A ++ W +M A +F + E
Sbjct: 48 HAHVLKLGHGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVIT 107
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ ++ G+ K + E A ++ M ER V ++ A+ A+ +E +++ +
Sbjct: 108 WTAMVTGYAKVKDLEAARRYFDCMPERSV----VSWNAMLSGYAQNGLAEEALRLFDEML 163
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
G + N++I+ Y + ++ A +F M ++V +W+++IA +A NG + ++
Sbjct: 164 --GAYRNSVTWNAMISAYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIE 221
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
LF EM K P+E +VSV+SAC HLGAL+LG L N L++ ++I MY
Sbjct: 222 LFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMY 281
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+CG +E +F+ MA + ++Y+ +ISG A HG G EA+++ S M G+EPD V ++
Sbjct: 282 SRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFI 341
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
GVL+ACSHAGL+ EG F+ +K P + HY C+VDL+GR G L +A ++ MP+
Sbjct: 342 GVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPM 396
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ + V+ SLL+AS++H +E+GE+AA LF++ + +++LLSN+YA A RW DV +I
Sbjct: 397 EPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERI 456
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M G+ ++ G+S VE K++KF+ DRSH D+IY+++ ++ +++ GY D
Sbjct: 457 REAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADK 516
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
S VLRDV+E+EK E + HS+KLAI +AL+ G+ IR+ +NLR+C DCHT K+IS +
Sbjct: 517 SCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKL 576
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
R IIVRD RFH F DG CSC+DYW
Sbjct: 577 EGRVIIVRDNNRFHCFNDGLCSCKDYW 603
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 94/366 (25%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
++R + + + + +Y +M GV PD F +P L K+ A G+ H HV K+G
Sbjct: 1 MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKS-----AGTGGIGFHAHVLKLG 55
Query: 162 FECDLFVQNSLINM---------------------------------------------Y 176
D FV+N++I+M Y
Sbjct: 56 HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115
Query: 177 GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESIL 236
K + +E A F M ++SV SW+A+++ +A NGL E L+LF EM
Sbjct: 116 AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM------------- 162
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
LGA N + ++I Y++ G L+ LF M
Sbjct: 163 ---------LGAYR----------------NSVTWNAMISAYMRVGDLDSARKLFNTMPG 197
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ +T++ MI+G A +GQ A+ +F EM+ + L PD+V V V+SAC H G + G
Sbjct: 198 RNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNW 257
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKV 414
R E +I ++ + ++ + R G + +A + Q M + DVV + +L+S
Sbjct: 258 VV-RFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR--DVVSYNTLISGFAA 314
Query: 415 H-HNLE 419
H H +E
Sbjct: 315 HGHGVE 320
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/562 (37%), Positives = 318/562 (56%), Gaps = 10/562 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
+++H+ + K GF N F + LV A CA M A +F Q+ E +N++I
Sbjct: 30 QQLHSLIHKHGFDANIFVGTALVDMYAKCA-----DMHSAVRVFDQMPERNLVSWNSMIV 84
Query: 105 GFVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
GF ++ A+ ++ ++ E+ V P+ + ++ ACA + L G Q+HG V K G
Sbjct: 85 GFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLV 144
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
+V NSL++MY KC + +F+ + + V +W+ ++ N + E F M
Sbjct: 145 PLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVM 204
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
E P+E+ +VL + L AL G H +I+ N+ + SLI MY KCG
Sbjct: 205 RREGIL-PDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGS 263
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L +F + D ++++ MIS +HG + + +F ML EG+EP V +V VLSA
Sbjct: 264 LVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSA 323
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSH G V EGL F+ MK + + P +HY C+VDL+GRAG L EA I+SMP++
Sbjct: 324 CSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPS 383
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
VW +LL A + + NL++G AA+ LF++ ++P +YVLL+NM R+ R + ++R M
Sbjct: 384 VWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMG 443
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
G+ + PG S ++V + F + DRSH + D IY+M+ ++E +K +GY + V
Sbjct: 444 VNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTN 503
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
++E+E+ + L HS+KLA+AF L+ L SPIRI +NLR C CHT KL S I++REI
Sbjct: 504 HLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREI 563
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFHRF DG CSC DYW
Sbjct: 564 IVRDINRFHRFADGFCSCGDYW 585
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G P+ FTF ++ A A + G Q+H + K GF+ ++FV +L++MY KC + A
Sbjct: 5 GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F QM ++++ SW+++I N L+ + +F ++ EK P E + SVLSAC +
Sbjct: 65 VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
+G L+ G+ HG +++ V SL+DMY KC ++G+ LF+ + D+ +T++V+
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEY 364
+ G + + +EA + F M REG+ PD+ + VL + + +++G D+ +KL Y
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 244
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V + G ++ + + G L +A ++ + + N + W +++SA ++H
Sbjct: 245 --VKNMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLH 292
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 310/527 (58%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F ++ E + T+I GFV F EA L+ M+E + + TF +
Sbjct: 166 GLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMI 225
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+A A L ++ G QIH K G D FV +LI+MY KC +E A +F QM +K+
Sbjct: 226 RASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTV 285
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
W++IIA++A +G E L + EM + + + + V+ C L +L+ K H +
Sbjct: 286 GWNSIIASYALHGYSEEALSFYYEMRDSGA-KIDHFTISIVIRICARLASLEYAKQAHAA 344
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L+R +++ T+L+D Y K G +E +F M K ++++ +I+G HGQG+EA
Sbjct: 345 LVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEA 404
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +MLREG+ P+ V ++ VLSACS++GL G F M ++++ P HY C+V+
Sbjct: 405 VEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVE 464
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GR G+L EA ELI+S P + +W +LL+A ++H NLE+G++AA+NL+ + +
Sbjct: 465 LLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCN 524
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y++L N+Y + + + A + + KGL P + +EV ++ Y F+ D+SH I
Sbjct: 525 YIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEI 584
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
YE ++ M ++ GY + +L DVDE+E+R LK HS+KLAIAF LI+ +P++I
Sbjct: 585 YEKVNNMMVEISRHGYVEENKALLPDVDEEEQR-ILKYHSEKLAIAFGLINTPHWTPLQI 643
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ R+C DCH+ K I+++ REI+VRD RFH F+DG+CSC DYW
Sbjct: 644 TQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 149/321 (46%), Gaps = 35/321 (10%)
Query: 112 FEEALFLYN--EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+ EA+ L+ E+ G + T+ AL AC L++++ ++ ++ GFE DL+V
Sbjct: 96 YREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVM 155
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF----GEMNN 225
N ++ ++ KC + A +F +M +K +ASW +I +G +SE LF E N+
Sbjct: 156 NRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFND 215
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
+ +++ A LG + +G+ H ++ + V +LIDMY KCG +E
Sbjct: 216 GR-----SRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIE 270
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC- 344
C+F M +K + ++ +I+ A+HG +EALS + EM G + D V+ C
Sbjct: 271 DAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICA 330
Query: 345 ----------SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+HA LV G + IV +VD + G + +A +
Sbjct: 331 RLASLEYAKQAHAALVRRG--------YDTDIVANT----ALVDFYSKWGRMEDAWHVFN 378
Query: 395 SMPIQQNDVVWRSLLSASKVH 415
M ++N + W +L++ H
Sbjct: 379 RMR-RKNVISWNALIAGYGNH 398
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 166/326 (50%), Gaps = 9/326 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H+ LK G + F + L+ S GS++ A +F Q+ E +N++I +
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDM--YSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA 295
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
EEAL Y EM + G + D+FT + + CA+L +L+ Q H + + G++ D+
Sbjct: 296 LHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIV 355
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+L++ Y K ++E A +F +M +K+V SW+A+IA + ++G E +++F +M E
Sbjct: 356 ANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREG 415
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEK 286
P ++VLSAC++ G + G S+ R+ + + ++++ + G L++
Sbjct: 416 MI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLGREGLLDE 474
Query: 287 GLCLFRMMADKCQLT-YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV-YVGVLSAC 344
L R K ++ +++ MH + E + +E L G+EP+ + Y+ +L+
Sbjct: 475 AYELIRSAPFKPTTNMWATLLTACRMH-ENLELGKLAAENLY-GMEPEKLCNYIVLLNLY 532
Query: 345 SHAGLVNEGLLCFDRMKLE-YRIVPT 369
+ +G + E +K + R++P
Sbjct: 533 NSSGKLKEAAGVLQTLKRKGLRMLPA 558
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 321/573 (56%), Gaps = 41/573 (7%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L+ + +VH ++K G N F + LVA G + A + Q+
Sbjct: 143 VLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAM--YGKCGCLREARKVLDQMPY 200
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N+++ G+ + +F++AL + EM + D T +L
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL---------------- 244
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
S + Y E V++ +F++M +K++ SW+ +IA + +N +
Sbjct: 245 -----------------SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 214 SECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E + LF +M E+C +P+ + S+L AC L AL LG+ H + + N+++E
Sbjct: 288 NEAVSLFLQM--EECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLEN 345
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCGCLE+ +F M + ++++ M+S GQG +A+++F++ML G P
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP 405
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D + +V VLSACSH GL+++G F M +Y IVP ++H+ C+VDL GRAG + EA
Sbjct: 406 DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSF 465
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ MP++ N+ VW +LLSA +VH ++IG +AA LFQ+ YVLLSN+YA+A W
Sbjct: 466 IKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMW 525
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
DV +R M G+ + PG S VE+ +V+ F++ D+ HP NIY + + ++K
Sbjct: 526 KDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKEL 585
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY P L DV+ ++K L HS+KLAI FA+++ QG+PIRI +NLR+C DCH
Sbjct: 586 GYIPQTESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAI 645
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I R IIVRD RFH F +G CSC DYW
Sbjct: 646 KLISKIVSRNIIVRDCNRFHHFSNGICSCGDYW 678
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 182/386 (47%), Gaps = 43/386 (11%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAH-VLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
++ C IL ++ K+H+ V+ +P A L+ A S G A I
Sbjct: 36 FSKEACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMR--AYSAQGETSVARYI 93
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + E FN +IR +V + EAL ++ M PD++TFP + KAC+ L L
Sbjct: 94 FDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNL 153
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ G+Q+H + KVG + +LF+ N+L+ MYGKC + A + QM + V SW++++A +
Sbjct: 154 RVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGY 213
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A +G + + L++ C + +L+L G++ S
Sbjct: 214 AQSGQFDDALEI-----------------------CKEMDSLNLNH-DAGTM---ASLSP 246
Query: 268 VIVETSLIDM-YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
V+ TSL ++ Y+ +F M K ++++VMI+ + EA+S+F +M
Sbjct: 247 VVCYTSLENVQYIH--------NMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQME 298
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G++PD V +L AC + G ++ + + P + ++D+ + G L
Sbjct: 299 ECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIE-KGNLRPNLLLENALLDMYAKCGCL 357
Query: 387 GEALELIQSMPIQQNDVV-WRSLLSA 411
EA ++ M ++ DVV W S++SA
Sbjct: 358 EEARDVFDKMRLR--DVVSWTSMMSA 381
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L C +L +++H ++ K N + L+ A G ++ A +F ++
Sbjct: 311 SLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYA--KCGCLEEARDVFDKMR 368
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +++ + + + +A+ L+ +M + G PD+ F ++ AC+ L +G
Sbjct: 369 LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR- 427
Query: 153 IHGHVFKVGFECDLFVQN-----SLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
H F++ E V +++++G+ +VE A + KQM + + W A+++A
Sbjct: 428 ---HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/613 (33%), Positives = 331/613 (53%), Gaps = 24/613 (3%)
Query: 13 LTQPEEPPKGP-----------ELNLRLKEQECLT------ILKTC---KNLEEFKKVHA 52
L P P GP EL+L L + T I+ C KNL + +H+
Sbjct: 27 LAAPFSFPSGPACSSSSSSGLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHS 86
Query: 53 HVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEF 112
H+ + + F ++L+ G++ A +F I + LI G+ +
Sbjct: 87 HLSRSRLAGDGFLLNSLIHM--YCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMP 144
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSL 172
EAL L +M P FTF + KA G Q+H K + D++V ++L
Sbjct: 145 AEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSAL 204
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
++MY +C++++ A +F +D K+ SW+A+IA A G L F EM +
Sbjct: 205 LDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNG-FGAT 263
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
SV SA +GAL+ G+ H +I++ L V +++ MY K G + +F
Sbjct: 264 HFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFD 323
Query: 293 MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+ + +T++ M++ A +G GKEA++ F E+ + G++ + + ++ VL+ACSH GLV E
Sbjct: 324 RVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKE 383
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G FD MK +Y + P + HY VDL+GRAG+L EAL + MP++ VW +LL A
Sbjct: 384 GKQYFDMMK-DYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC 442
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
++H N +IG+ AA ++F+++ VLL N+YA +W D A++R M + G+ + P
Sbjct: 443 RMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPA 502
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S VE+ V+ FV+ D +HP + IY M ++ ++K GY P+ VL + E E+
Sbjct: 503 CSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERET 562
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
+L+ HS+K+A+AFALI++ G+ IRI +N+R+C DCH+ + +S +++REI+VRD RFH
Sbjct: 563 KLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFH 622
Query: 593 RFKDGTCSCRDYW 605
F +G+CSC DYW
Sbjct: 623 HFSNGSCSCGDYW 635
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/441 (44%), Positives = 281/441 (63%), Gaps = 1/441 (0%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
DL N++I+ Y +V A IF + + SWS++I+A+A + E L+L+ EM+
Sbjct: 53 DLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMH 112
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
P+ LVSV+SAC+ LGAL +G H + N L++ + T+LIDMY KCG +
Sbjct: 113 AASII-PDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDI 171
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
E +F M +K T+S MI GLA HG G E+LS+FS+M+ EG++P+ V +VGVL AC
Sbjct: 172 ESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIAC 231
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+H GLV+EG F M + I PTV+HYGC+VDL+GR+G + EA +LI+SM + + ++
Sbjct: 232 THVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTII 291
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
WR+LL A ++H N+EI E A L ++ YVLLSN+YA+A W VA++R +
Sbjct: 292 WRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRR 351
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+ + PG S +E K+++FVS DR HP IY ++ +M +LK GY P VL+D
Sbjct: 352 DNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQD 411
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
+DE K L HS+KLAIAFAL+ S IRI +NLR C DCH+ KLIS++Y+R++I
Sbjct: 412 IDEQSKERSLAEHSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDRKLI 471
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRDR RFH F +G CSC+DYW
Sbjct: 472 VRDRNRFHHFSEGQCSCKDYW 492
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 34/266 (12%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A IF ++ AF ++++I + K +EAL L+ EM + PD T ++
Sbjct: 68 GEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVV 127
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC+ L AL G ++H V E DL + +LI+MY KC +E A +F +M +K V
Sbjct: 128 SACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQ 187
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+WS++I A++GL E L LF +M +E +P V VL ACTH+G + GK
Sbjct: 188 TWSSMIIGLANHGLGHESLSLFSKMISEGM-KPNGVTFVGVLIACTHVGLVSEGK----K 242
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
R+++ ++ I T ++ Y GC M+ L G +EA
Sbjct: 243 YFRSMNEVHGIEPT--VEHY---GC---------------------MVDLLGRSGHVEEA 276
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSAC 344
+ M EPD +++ +L AC
Sbjct: 277 RQLIRSMT---FEPDTIIWRALLGAC 299
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/602 (35%), Positives = 334/602 (55%), Gaps = 24/602 (3%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASN 68
LL E PP + + L C + E + +HA +L+ N N
Sbjct: 338 LLQTDEGPPNSMTFS---------SALGACSSPEALMNGRTIHAMILQRSL-QNVLLIGN 387
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
+ T S SM+ +F + N L G+ + A+ +++ M G++
Sbjct: 388 SLLT-MYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIK 446
Query: 129 PDNFTFPALFKACAKLQALKE-GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P+ T L C L L GM +H +V + G D ++ NSLI MY C +E ++
Sbjct: 447 PNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTG 506
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHL 246
IF +++ KSV SW+AIIAA+ +G E +KLF M+++ + + L LS+ +L
Sbjct: 507 IFSRINNKSVISWNAIIAANVRHGRGEEAIKLF--MDSQHAGNKLDRFCLAECLSSSANL 564
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT---YS 303
+L+ G HG ++N + V + +DMY KCG ++ C+ + + D ++
Sbjct: 565 ASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMD---CMLKTLPDPAHRPTQCWN 621
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+ISG A +G KEA F M+ G +PD V +V +LSACSHAGL+++G+ ++ M
Sbjct: 622 TLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPT 681
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
+ + P ++H C+VDL+GR G EA + I MP+ ND++WRSLLS+S+ H NL+IG
Sbjct: 682 FGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSRTHKNLDIGRK 741
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AAKNL +++ S YVLLSN+YA RW DV K+R+ M + LN+ P S +++ +V
Sbjct: 742 AAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKRPACSWLKLKNEVS 801
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
F DRSH + IY + ++ +L+ GY D S L D DE++K L HS+KLA+
Sbjct: 802 TFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQKEHNLWNHSEKLAL 861
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
A+ L+ + +GS IRI +NLR+C DCH KL+S+++ REI++RD RFH+FK G+CSC D
Sbjct: 862 AYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDPYRFHQFKHGSCSCSD 921
Query: 604 YW 605
+W
Sbjct: 922 FW 923
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 176/415 (42%), Gaps = 36/415 (8%)
Query: 36 TILKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T++ C LE+ +V AHV+ G + A++L+ + + A +F +++
Sbjct: 150 TVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITM--FGNLRRVQDAERLFDRME 207
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N +I + E + + + ++M V+PD T +L CA + G
Sbjct: 208 ERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSG 267
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH G C + + N+L+NMY K++ A ++F+ M ++ V SW+ +I+++ +
Sbjct: 268 IHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNS 327
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L+ G++ P S L AC+ AL G+ H +++ +++
Sbjct: 328 CVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGN 387
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL+ MY KC +E +F M ++ +V+ G A A+ +FS M G++P
Sbjct: 388 SLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKP 447
Query: 333 DDVVYVGVLSACS------------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+ + + + C HA + GLL EY + Y DL
Sbjct: 448 NYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL-----SDEYITNSLITMYATCGDLE 502
Query: 381 GRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
G+ I V+ W ++++A+ H GE A K LF + H
Sbjct: 503 SSTGIFSR---------INNKSVISWNAIIAANVRHGR---GEEAIK-LFMDSQH 544
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 141/301 (46%), Gaps = 12/301 (3%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGF 106
+HA + G N + + T L +GS A +F ++ + + ++
Sbjct: 66 IHALTHRAGLMGNVY-----IGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
EEAL Y M + GV + + C L+ G+Q+ HV G +
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
V NSLI M+G +V+ A +F +M+++ SW+A+I+ ++ ++S+C + +M +
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ +P+ + L S++S C + LG H + + +V + +L++MY G L++
Sbjct: 241 EV-KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDE 299
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR--EGLEPDDVVYVGVLSAC 344
LFR M+ + ++++ MIS EAL ++L+ EG P+ + + L AC
Sbjct: 300 AESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-PPNSMTFSSALGAC 358
Query: 345 S 345
S
Sbjct: 359 S 359
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 6/300 (2%)
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKEGMQIHGHVFKVGFECDLFVQNS 171
A L M ER V F +L AC + G IH + G ++++ +
Sbjct: 25 AFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTA 84
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L+++YG V A +F +M Q++V SW+AI+ A +SNG E L + M E
Sbjct: 85 LLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVM-C 143
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ L +V+S C L G ++ + +V V SLI M+ ++ LF
Sbjct: 144 NANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLF 203
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M ++ +++++ MIS + + + S+M ++PD ++S C+ + LV
Sbjct: 204 DRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVA 263
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + + + +V +V++ AG L EA L ++M +++ + W +++S+
Sbjct: 264 LG-SGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMS-RRDVISWNTMISS 321
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/515 (37%), Positives = 303/515 (58%), Gaps = 3/515 (0%)
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P +F F +L R + AL Y + + +F F ++ KACA L AL+ GM
Sbjct: 70 SPDSFLFCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAGMG 129
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H H +GF D FVQ +L+ +Y KC K++ A +F + +SV +W+A+I+ + NGL
Sbjct: 130 VHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQNGL 189
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++++ EM P+ + V+ LSAC GALDLG ++ +NV++
Sbjct: 190 AGRAIEVYREMRVAG-EAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGA 248
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L++MY +CG + K F M+ ++ +T++ MI+G MHG G EA+ +F M ++G P
Sbjct: 249 ALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPP 308
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+DV +V VLSAC+HAGLV++G F MK Y +VP +HY +VD+ GRAG+L +A++
Sbjct: 309 NDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQF 368
Query: 393 IQ-SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I S+P + VW ++L A K+H N +G A+ L + +PS VLLSN+YA + +
Sbjct: 369 IHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGK 428
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
V K+R M + L + G+SL+E+ + F ++SHP IY+ + ++ ++
Sbjct: 429 MNHVEKVRNTMIKRRLKKPIGYSLIEIGGVAHVFRMGEKSHPKTPEIYQYLEKLIHRITD 488
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ-GSPIRIARNLRMCNDCHT 570
GY P+ VL +++E+E+ L+ H +KLA+AF L+ S +PIRI +NLR+C DCH
Sbjct: 489 AGYMPETDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTAPIRIIKNLRICGDCHL 548
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S + REIIVRD RFH FK G CSC++YW
Sbjct: 549 AIKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 583
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 328/583 (56%), Gaps = 12/583 (2%)
Query: 28 RLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
++ + T++K C NL++ +++H+ VLK GF + L A S G + A
Sbjct: 299 KMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALAD--AYSKCGELADA 356
Query: 85 CSIFR-QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
+IF + +I G ++ + A+ L++ M E V P+ FT+ A+ KA
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA--S 414
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L L QIH V K ++ V +L+ Y K E A +IFK ++QK V +WSA+
Sbjct: 415 LSILPP--QIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLIRN 262
++ HA G LF +M + +P E + SV+ AC A +D G+ H I+
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGI-KPNEFTISSVIDACACPSAGVDQGRQFHAISIKY 531
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V ++L+ MY + G ++ +F D+ ++++ MISG A HG +A+ F
Sbjct: 532 RYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETF 591
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
+M G++ D V ++ V+ C+H GLV EG FD M +++I PT++HY C+VDL R
Sbjct: 592 RQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSR 651
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLL 442
AG L E + LI+ MP +VWR+LL A +VH N+E+G+ +A L + H S YVLL
Sbjct: 652 AGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLL 711
Query: 443 SNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMI 502
SN+YA A +W + ++R M + + + G S +++ KV+ F++ D+SHP D IY+ +
Sbjct: 712 SNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKL 771
Query: 503 HQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNL 562
+ +LK +GYSP+ S VL D+ ED+K L HS++LA+AF LI G+P++I +NL
Sbjct: 772 KVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNL 831
Query: 563 RMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+C DCH K++S+I +REII+RD RFH F G CSC D+W
Sbjct: 832 RVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDFW 874
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 172/374 (45%), Gaps = 25/374 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS+ +F + + + +L+ G E + L+ M G+ P+ FTF ++
Sbjct: 149 GSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVL 208
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A A AL G ++H K G +FV NSL+NMY KC VE A ++F M+ + +
Sbjct: 209 SAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMV 268
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+ ++A N E L+LF E + + +S +V+ C +L L L + H
Sbjct: 269 SWNTLMAGLQLNECELEALQLFHE-SRATMGKMTQSTYATVIKLCANLKQLALARQLHSC 327
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM-MADKCQLTYSVMISGLAMHGQGKE 317
++++ L V T+L D Y KCG L L +F M + ++++ +ISG +G
Sbjct: 328 VLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPL 387
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSAC-------SHAGLVNEGLLCFDRMKLEYRIVPTV 370
A+ +FS M + + P++ Y +L A HA ++ K Y+ +P+V
Sbjct: 388 AVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVI----------KTNYQHIPSV 437
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLF 429
++ + G +AL + + I+Q DVV W ++LS + E G N
Sbjct: 438 G--TALLASYSKFGSTEDALSIFKM--IEQKDVVAWSAMLSCHAQAGDCE-GATYLFNKM 492
Query: 430 QINSHHPSDYVLLS 443
I P+++ + S
Sbjct: 493 AIQGIKPNEFTISS 506
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
F+ RG V EV L ++ GV D+ T + KAC + G Q+H
Sbjct: 72 FDYARRGMVPEV-----LDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCV 126
Query: 159 KVGFE-CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
K G + ++ SL++MY KC V +F+ M +K+V +W++++ A + SE +
Sbjct: 127 KCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVM 186
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF M E W P SVLSA GALDLG+ H ++ +V V SL++M
Sbjct: 187 ALFFRMRAEGIW-PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNM 245
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG +E +F M + ++++ +++GL ++ EAL +F E + Y
Sbjct: 246 YAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTY 305
Query: 338 VGVLSACSH---AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
V+ C++ L + C +K + + V + D + G L +AL +
Sbjct: 306 ATVIKLCANLKQLALARQLHSCV--LKHGFHLTGNVM--TALADAYSKCGELADALNIFS 361
Query: 395 SMPIQQNDVVWRSLLSA 411
+N V W +++S
Sbjct: 362 MTTGSRNVVSWTAIISG 378
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/567 (35%), Positives = 331/567 (58%), Gaps = 11/567 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDF 99
NL + K+VHA+ ++ G N + LV A C + Y F + E +
Sbjct: 364 NLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCC-----CVKYMGHAFECMHEKDLISW 418
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
T+I G+ + EA+ L+ ++ +G++ D ++ +AC+ L++ +IHG+VFK
Sbjct: 419 TTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFK 478
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
D+ +QN+++N+YG+ +++A F+ + K + SW+++I NGL E L+L
Sbjct: 479 RDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALEL 537
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F + +P+ ++S LSA +L +L GK HG LIR L + +SL+DMY
Sbjct: 538 FYSLKQTNI-QPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYA 596
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
CG +E +F + + + ++ MI+ MHG G +A+++F +M + + PD + ++
Sbjct: 597 CCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLA 656
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L ACSH+GL+ EG F+ MK Y++ P +HY C+VDL+ R+ L EA +++MPI+
Sbjct: 657 LLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIK 716
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ +W +LL A +H N E+GE+AAK L Q ++ + Y L+SN++A RW DV ++R
Sbjct: 717 PSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVR 776
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL-KFEGYSPDI 518
M GL ++PG S +EV K++ F+++D+SHP D+IY + Q L K GY
Sbjct: 777 LRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQT 836
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
V +V E+EK + L GHS++LA+ + L+ +G+ IRI +NLR+C+DCHT+ K+ S +
Sbjct: 837 KFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEV 896
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
+R ++VRD RFH F+ G CSC D+W
Sbjct: 897 SQRPLVVRDANRFHHFERGLCSCGDFW 923
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 175/349 (50%), Gaps = 17/349 (4%)
Query: 10 SLLLTQPEEPPKGPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCA 66
+LL T P P RL+ L +L C K L + +++HA +LK + F A
Sbjct: 32 TLLSTHPLATPS------RLEHAHSL-LLDLCVAAKALPQGQQLHALLLKSHL--SAFLA 82
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
+ LV GS+ A +F ++ E F +N L+ FV ++ EA+ LY +M G
Sbjct: 83 TKLVLM--YGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLG 140
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
V D TFP++ KAC L + G +IHG K G+ +FV N+LI MYGKC + A
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGAR 200
Query: 187 AIFK--QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
+F M+++ SW++II+AH + G E L LF M E V+ L
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRM-QEVGVASNTYTFVAALQGVE 259
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
+ LG HG+++++ +V V +LI MY KCG +E +F M + ++++
Sbjct: 260 DPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNT 319
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
++SGL + +AL+ F +M G +PD V + +++A +G + +G
Sbjct: 320 LLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKG 368
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 206/421 (48%), Gaps = 14/421 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI- 91
++LK C L E + ++H +K G+ F + L+A G + A +F I
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAM--YGKCGDLGGARVLFDGIM 207
Query: 92 -DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
++ +N++I V E EAL L+ M E GV + +TF A + +K G
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
M IHG V K D++V N+LI MY KC ++E A +F+ M + SW+ +++ N
Sbjct: 268 MGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQN 327
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
L+S+ L F +M N +P++ ++++++A G L GK H IRN N+ +
Sbjct: 328 ELYSDALNYFRDMQNSG-QKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+L+DMY KC C++ F M +K ++++ +I+G A + EA+++F ++ +G+
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D ++ VL ACS GL + + + R + + +V++ G G + A
Sbjct: 447 DVDPMMIGSVLRACS--GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYAR 504
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+S I+ D+V W S+++ VH+ L + + + + P ++S + A A
Sbjct: 505 RAFES--IRSKDIVSWTSMITCC-VHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561
Query: 450 Q 450
Sbjct: 562 N 562
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 94/209 (44%), Gaps = 9/209 (4%)
Query: 4 TSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKK---VHAHVLKWGFF 60
T +H L + E + N++ ++ L NL KK +H +++ GFF
Sbjct: 523 TCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFF 582
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
AS+LV A G+++ + +F + + + ++I +A+ L+
Sbjct: 583 LEGPIASSLVDMYACC--GTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFK 640
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN--SLINMYGK 178
+M ++ V PD+ TF AL AC+ + EG + + K G++ + + ++ ++++ +
Sbjct: 641 KMTDQNVIPDHITFLALLYACSHSGLMVEGKRFF-EIMKYGYQLEPWPEHYACMVDLLSR 699
Query: 179 CEKVEFASAIFKQMDQK-SVASWSAIIAA 206
+E A + M K S W A++ A
Sbjct: 700 SNSLEEAYHFVRNMPIKPSSEIWCALLGA 728
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/543 (37%), Positives = 317/543 (58%), Gaps = 6/543 (1%)
Query: 68 NLVATCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
++V T +S +G + + A S+F ++ ++ ++ + + EAL L+ +M
Sbjct: 96 SIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDL 155
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
GV P+ T + ACA L L+ G +H V G + + V +L+N+YGKC ++E
Sbjct: 156 DGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEA 215
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A F Q+ +K+V +WSAI AA+A N + +++ M+ E P + VSVL AC
Sbjct: 216 AVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGL-VPNSTTFVSVLDACA 274
Query: 245 HLGALDLGKCTH--GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
+ AL G+ H ++ +V V T+L++MY KCG L +F +A + +
Sbjct: 275 AIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLW 334
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ +I+ A HGQ ++AL +F M EGL+P + + VL ACSHAG++++G F
Sbjct: 335 NSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIG 394
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
++ I P +H+GC+VDL+GRAG + ++ +L+ MP + + V W + L A + + N++
Sbjct: 395 DHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAI 454
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
AA+NLFQ++ + YVLLSNMYA+A RW DVA++R M + G S +EV +V
Sbjct: 455 WAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRV 514
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+S D HP I+ + ++ +K GY PD VL DV ++ K + HS+KLA
Sbjct: 515 HEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLA 574
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
+AFAL+ +GSPIR+ +NLR+CNDCHT +K IS + REI+VRD RFHRF++G CSC
Sbjct: 575 MAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCG 634
Query: 603 DYW 605
DYW
Sbjct: 635 DYW 637
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 163/347 (46%), Gaps = 3/347 (0%)
Query: 74 ALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFT 133
A S G++ F ++ +N LI ++ +F+ + M +G+ P
Sbjct: 4 AYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVG 63
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
AC + + G I + G E + VQ +L++MYGK A+++F +M
Sbjct: 64 ISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMS 123
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+ V +WSA++AA+A NG E L LF +M+ + P + LVS L AC LG L G
Sbjct: 124 HRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGV-APNKVTLVSGLDACASLGDLRSGA 182
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + V+V T+L+++Y KCG +E + F + +K + +S + + A +
Sbjct: 183 LMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARND 242
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK-LEYRIVPTVQH 372
+ ++A+ + M EGL P+ +V VL AC+ + +G +R + L + V
Sbjct: 243 RNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYV 302
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+V++ + G L A ++ + + V+W SL++ + H E
Sbjct: 303 LTALVNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTE 348
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 3/240 (1%)
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+++ Y + + F +M + SW+A+IAA+ N + C F M + P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGI-NP 59
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
E + LSACT + +G+ +++ IV+T+L+ MY K G +F
Sbjct: 60 GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M+ + + +S M++ A +G +EAL +F +M +G+ P+ V V L AC+ G +
Sbjct: 120 LRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLR 179
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G L R++ + I V +V+L G+ G + A+E + +++N V W ++ +A
Sbjct: 180 SGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI-VEKNVVAWSAISAA 237
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/542 (35%), Positives = 298/542 (54%), Gaps = 36/542 (6%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +I G+ + EA ++ +M ++ D FTF ++ CA + G ++H +
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFL 316
Query: 159 KV----GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH------- 207
K + + V N+LI Y KC KV+ A IF +M ++ + SW+ I++ +
Sbjct: 317 KTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMD 376
Query: 208 ------------------------ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A G E LK F M + + P + + +C
Sbjct: 377 EAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQG-FEPCDYAFAGAIISC 435
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+ LG+L G+ H ++R ++ +LI MY +CG ++ CLF M ++++
Sbjct: 436 SVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWN 495
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI+ L HGQG +A+ +F EML+EG+ PD + ++ V+SACSHAGLV EG FD M
Sbjct: 496 AMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNV 555
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y + P +HY ++DL+ RAG EA E+++SMP + +W +LL+ ++H N+++G
Sbjct: 556 YGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIE 615
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
AA+ LF++ H YVLLSNMYA A +W D+AK+R M +G+ + PG S +EV KV+
Sbjct: 616 AAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVH 675
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
F+ D +HP IY + Q+ +++ GY PD VL DV+ D K L HS+KLA+
Sbjct: 676 SFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAV 735
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
A+ + L G+ +R+ +NLR+C DCH K +S + REI+VRD KRFH F+DG CSC D
Sbjct: 736 AYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGD 795
Query: 604 YW 605
YW
Sbjct: 796 YW 797
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 12/278 (4%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
MD A S F ++ E + +I G + EEAL +N M +G EP ++ F +
Sbjct: 375 MDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIIS 434
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C+ L +LK G Q+H V + G+E L N+LI MY +C V+ A +F M SW
Sbjct: 435 CSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISW 494
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A+IAA +G ++ ++LF EM E P+ ++V+SAC+H G + G+ S+
Sbjct: 495 NAMIAALGQHGQGTQAIELFEEMLKEGIL-PDRISFLTVISACSHAGLVKEGRKYFDSM- 552
Query: 261 RNISALNVIVE--TSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQ--- 314
N+ +N E +ID+ + G + + M + + +++G +HG
Sbjct: 553 HNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDL 612
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
G EA +E L E D YV + + + AG N+
Sbjct: 613 GIEA----AERLFELKPQHDGTYVLLSNMYAVAGQWND 646
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 174/434 (40%), Gaps = 87/434 (20%)
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEP-GAFD---FNTLIRGFVKEVEFEEALFL 118
P + A S G + + IF D P G D +N +I + + A+ L
Sbjct: 77 PDIVARTTLIAAYSAAGDLKLSRKIFS--DTPLGMRDSVFYNAMITAYSHNHDGHAAIEL 134
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEG--MQIHGHVFKVGFECDLFVQNSLINMY 176
+ +M PDN+TF ++ A A L A KE Q+H V K G V N+LI+ Y
Sbjct: 135 FCDMQRDNFRPDNYTFTSVLGALA-LVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSY 193
Query: 177 GKCEKVEF---------ASAIFKQMDQKSVASWS-------------------------- 201
KC A +F +M + SW+
Sbjct: 194 VKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKL 253
Query: 202 -----AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
A+I+ +A GL+ E ++F +M K + +E SV+S C + G LGK H
Sbjct: 254 GVAWNAMISGYAHRGLYLEAFEMFRKMIMSKI-QLDEFTFTSVISVCANAGCFRLGKEMH 312
Query: 257 GSLIRNISA----LNVIVETSLIDMYVKCG------------------------------ 282
++ ++ + + V +LI Y KCG
Sbjct: 313 AYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNV 372
Query: 283 -CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
C+++ F M +K L++ +MISGLA G +EAL F+ M +G EP D + G +
Sbjct: 373 RCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAI 432
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+CS G + G ++ + Y ++ ++ + R G++ A L +MP +
Sbjct: 433 ISCSVLGSLKHGRQLHAQV-VRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPC-VD 490
Query: 402 DVVWRSLLSASKVH 415
+ W ++++A H
Sbjct: 491 AISWNAMIAALGQH 504
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 134/337 (39%), Gaps = 81/337 (24%)
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG- 211
+H H+ GF+ + N LI++Y K K+ +A +F ++ Q + + + +IAA+++ G
Sbjct: 35 VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94
Query: 212 ------LWSE--------------------------CLKLFGEMNNEKCWRPEESILVSV 239
++S+ ++LF +M + +RP+ SV
Sbjct: 95 LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDN-FRPDNYTFTSV 153
Query: 240 LSACTHLGALDLGKCT--HGSLIRNISALNVIVETSLIDMYVKC---------GCLEKGL 288
L A L A C H +++++ + V +LI YVKC + +
Sbjct: 154 LGALA-LVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEAR 212
Query: 289 CLFRMMADKCQLTYSV-------------------------------MISGLAMHGQGKE 317
LF M ++ +L+++ MISG A G E
Sbjct: 213 KLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLE 272
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQH--YG 374
A +F +M+ ++ D+ + V+S C++AG G + +K P V
Sbjct: 273 AFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNN 332
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++ + G + A E+ MP +++ V W +LS
Sbjct: 333 ALITFYWKCGKVDIAQEIFNKMP-ERDLVSWNIILSG 368
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L+ +++HA V+++G+ + A N + T + G +D A +F + A +N +
Sbjct: 440 SLKHGRQLHAQVVRYGY-ESSLSAGNALIT-MYARCGVVDAAHCLFINMPCVDAISWNAM 497
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV-G 161
I + + +A+ L+ EM + G+ PD +F + AC+ +KEG + + V G
Sbjct: 498 IAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYG 557
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA 206
D +I++ + K A + + M + W A++A
Sbjct: 558 VNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 326/580 (56%), Gaps = 20/580 (3%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMDYACSIFRQI 91
++L C L F+ ++H+ L+ G + + LV A SH G S+ A +F ++
Sbjct: 260 SMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRM 319
Query: 92 DEPGAFDFNTLIRGFVKE-VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
+ + L+ G+V+ + + + L+ +M G+ P++ T+ ++ KACA L G
Sbjct: 320 PKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSG 379
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
QIH H K V N+L++MY + +E A F Q+ +K++ S+S + +
Sbjct: 380 RQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRS 439
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILV----SVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ + + R E I S++SA +G L G+ H ++
Sbjct: 440 NTY----------QDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ + SL+ MY +CG L +F M D ++++ MISGLA HG AL +F +M+
Sbjct: 490 DRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMI 549
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G++P+DV Y+ VLSACSHAGLV EG F M+ + ++P ++HY C+VDL+GR+G++
Sbjct: 550 AAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLV 609
Query: 387 GEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
+AL+ I MP Q + +VW++LL A K H+N++IGEIAA ++ Q+ P+ YVLLSN+Y
Sbjct: 610 EDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLY 669
Query: 447 ARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQME 506
A A W VA+IR+ M K L + G S + V +++F + D SHP + IY + +
Sbjct: 670 AEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLI 729
Query: 507 WQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS-PIRIARNLRMC 565
++K GY PD S VL D+ ++ K L HS+K+A+AF LI + + PIRI +NLR+C
Sbjct: 730 REIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPIRIFKNLRVC 789
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH+ K +S REII+RD RFHR KDG CSC +YW
Sbjct: 790 VDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 7/246 (2%)
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALK-EGMQIHGHVFKVGF-ECDLFVQNS 171
EAL L+ E E G+ P+ FT A +AC + G + G VFK+GF D+ V +
Sbjct: 135 EALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCA 194
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
LI+M+ K + +F + +++V W+ +I +A +G E ++LF +M E ++P
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDM-LENGFQP 253
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC---GCLEKGL 288
++ L S+LSACT LG+ LG+ H +R + V L+DMY K L
Sbjct: 254 DQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAR 313
Query: 289 CLFRMMADKCQLTYSVMISGLAMHG-QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M + ++ ++SG G Q + + +F +ML EG+ P+ + Y +L AC++
Sbjct: 314 EVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANL 373
Query: 348 GLVNEG 353
G + G
Sbjct: 374 GDQDSG 379
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 178/400 (44%), Gaps = 54/400 (13%)
Query: 54 VLKWGFFWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
V K GF+ +++ CAL + G + +F + E + LI + +
Sbjct: 179 VFKLGFW-----GTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQS 233
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
+EA+ L+ +M E G +PD +T ++ AC +L + + G Q+H ++G E D V
Sbjct: 234 GYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVS 293
Query: 170 NSLINMYGKC---EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW-SECLKLFGEMNN 225
L++MY K + + A +F +M + +V +W+A+++ + G ++ + LF +M N
Sbjct: 294 CGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLN 353
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYVKCGCL 284
E RP S+L AC +LG D G+ H ++ N++ LNV V +L+ MY + G +
Sbjct: 354 EGI-RPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESGSI 411
Query: 285 EKGLCLFRMMADK------------------------------CQLTYSVMISGLAMHGQ 314
E+ F + +K T+ +IS A G
Sbjct: 412 EEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGM 471
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+ + + L+ G D + ++S S G + + FD M ++ ++ +
Sbjct: 472 LTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMN-DHNVIS----WT 526
Query: 375 CVVDLMGRAGMLGEALELIQSM---PIQQNDVVWRSLLSA 411
++ + + G ALEL M ++ NDV + ++LSA
Sbjct: 527 SMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSA 566
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 24/277 (8%)
Query: 150 GMQIHGHVFKVG--FECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASWSAIIA 205
G + GH+ + G E D V NSL+ +Y KC V A ++F M + + SW+A+ +
Sbjct: 66 GRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMAS 125
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ NG +E L+LFGE E+ P L + AC A +L G+++ +
Sbjct: 126 CLSRNGAEAEALRLFGE-TLEEGLLPNAFTLCAATQACF---ASELFHLAGGAVLGLVFK 181
Query: 266 L-----NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
L +V V +LIDM+ K G L +F + ++ + ++++I+ A G EA+
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVV 377
+F +ML G +PD +LSAC+ G G R+ LE + +V
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCG----LV 297
Query: 378 DLMGRA---GMLGEALELIQSMPIQQNDVVWRSLLSA 411
D+ ++ L A E+ MP + N + W +LLS
Sbjct: 298 DMYAKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSG 333
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/580 (36%), Positives = 319/580 (55%), Gaps = 16/580 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI---- 91
I C ++ ++H+ + GF + + + N G +D A +F +
Sbjct: 146 VITACCDDVGLIGQLHSVAVSSGF--DSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
DE +N++I + + E +AL L+ EM RG+ D FT ++ A L+ L G+
Sbjct: 204 DE---VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q HG + K GF + V + LI++Y KC + +F+++ + + W+ +++ ++ N
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320
Query: 211 G-LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG-SLIRNISALNV 268
+ L+ F +M +RP + V V+SAC++L + GK H +L +I + +
Sbjct: 321 EEFLEDALECFRQMQGIG-YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V+ +LI MY KCG L+ LF MA+ ++ + MI+G A HG E+L +F ML
Sbjct: 380 SVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLER 439
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+ P + ++ VLSAC+H G V EG F+ MK ++ I P +HY C++DL+GRAG L E
Sbjct: 440 QIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSE 499
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A LI MP + W SLL A + H N+E+ AA + Q+ + + YV+LSNMYA
Sbjct: 500 AENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYAS 559
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A RW +VA +R M +G+ + PG S +EV ++++ FV++D SHP IYE + +M +
Sbjct: 560 AGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGK 619
Query: 509 LKFEGYSPDISQVLRDVD---EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+K GY PD+ L D EK RL HS+KLA+AF LI G P+ + +NLR+C
Sbjct: 620 MKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRIC 679
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K IS I REI VRD RFH FK+G CSC DYW
Sbjct: 680 GDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 167/351 (47%), Gaps = 13/351 (3%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F QI EP +NTLI + E AL L++ M E G++ D FT A+ AC
Sbjct: 93 AHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD 152
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSA 202
L Q+H GF+ + V N+L+ YGK ++ A +F M + SW++
Sbjct: 153 DVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNS 210
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I A+ + S+ L LF EM + + L SVL+A T L L G HG LI+
Sbjct: 211 MIVAYGQHQEGSKALGLFQEM-VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT 269
Query: 263 ISALNVIVETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG-KEALS 320
N V + LID+Y KC G + +F + + + ++ M+SG + + + ++AL
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT-VQHYGCVVDL 379
F +M G P+D +V V+SACS+ ++G + L+ I + ++ +
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ-IHSLALKSDIPSNRISVDNALIAM 388
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+ G L +A L M + N V S++ A H +E+ + +LFQ
Sbjct: 389 YSKCGNLQDARRLFDRMA-EHNTVSLNSMI-AGYAQHGIEMESL---HLFQ 434
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 16/316 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
LT ++L + H ++K GF N S L+ + C G M +F +I
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG----GGMSDCRKVFEEI 302
Query: 92 DEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
EP +NT++ G+ + EF E+AL + +M G P++ +F + AC+ L + +G
Sbjct: 303 TEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362
Query: 151 MQIHGHVFKVGFECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
QIH K + + V N+LI MY KC ++ A +F +M + + S +++IA +A
Sbjct: 363 KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQ 422
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+G+ E L LF M E+ P +SVLSAC H G ++ G + ++++ +
Sbjct: 423 HGIEMESLHLFQWM-LERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPE 480
Query: 270 VE--TSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
E + +ID+ + G L + L RM + + ++ ++ HG + A+ +++L
Sbjct: 481 AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540
Query: 327 REGLEPDDVVYVGVLS 342
+ LEP + VLS
Sbjct: 541 Q--LEPSNAAPYVVLS 554
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 35/242 (14%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F L K C + L G +H K + N I +Y KC ++ +A F+ +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 194 QKSVASWSAIIAAHASN-------------------------GLWSEC------LKLFGE 222
+V S++AIIAA+A +++C L LF
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E + L +V++AC L +G+ H + + V V +L+ Y K G
Sbjct: 131 M-REMGLDMDXFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNG 187
Query: 283 CLEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
L+ +F M + +++++ MI H +G +AL +F EM+R GL D VL
Sbjct: 188 DLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVL 247
Query: 342 SA 343
+A
Sbjct: 248 TA 249
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/580 (36%), Positives = 319/580 (55%), Gaps = 16/580 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI---- 91
I C ++ ++H+ + GF + + + N G +D A +F +
Sbjct: 146 VITACCDDVGLIGQLHSVAVSSGF--DSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIR 203
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
DE +N++I + + E +AL L+ EM RG+ D FT ++ A L+ L G+
Sbjct: 204 DE---VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGL 260
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q HG + K GF + V + LI++Y KC + +F+++ + + W+ +++ ++ N
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQN 320
Query: 211 G-LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG-SLIRNISALNV 268
+ L+ F +M +RP + V V+SAC++L + GK H +L +I + +
Sbjct: 321 EEFLEDALECFRQMQGIG-YRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRI 379
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V+ +LI MY KCG L+ LF MA+ ++ + MI+G A HG E+L +F ML
Sbjct: 380 SVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLER 439
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+ P + ++ VLSAC+H G V EG F+ MK ++ I P +HY C++DL+GRAG L E
Sbjct: 440 QIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSE 499
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A LI MP + W SLL A + H N+E+ AA + Q+ + + YV+LSNMYA
Sbjct: 500 AENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYAS 559
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A RW +VA +R M +G+ + PG S +EV ++++ FV++D SHP IYE + +M +
Sbjct: 560 AGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGK 619
Query: 509 LKFEGYSPDISQVLRDVD---EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
+K GY PD+ L D EK RL HS+KLA+AF LI G P+ + +NLR+C
Sbjct: 620 MKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRIC 679
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K IS I REI VRD RFH FK+G CSC DYW
Sbjct: 680 GDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 167/351 (47%), Gaps = 13/351 (3%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F QI EP +NTLI + E AL L++ M E G++ D FT A+ AC
Sbjct: 93 AHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD 152
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSA 202
L Q+H GF+ + V N+L+ YGK ++ A +F M + SW++
Sbjct: 153 DVGLIG--QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNS 210
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+I A+ + S+ L LF EM + + L SVL+A T L L G HG LI+
Sbjct: 211 MIVAYGQHQEGSKALGLFQEM-VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT 269
Query: 263 ISALNVIVETSLIDMYVKC-GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG-KEALS 320
N V + LID+Y KC G + +F + + + ++ M+SG + + + ++AL
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT-VQHYGCVVDL 379
F +M G P+D +V V+SACS+ ++G + L+ I + ++ +
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQ-IHSLALKSDIPSNRISVDNALIAM 388
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+ G L +A L M + N V S++ A H +E+ + +LFQ
Sbjct: 389 YSKCGNLQDARRLFDRMA-EHNTVSLNSMI-AGYAQHGIEMESL---HLFQ 434
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 154/316 (48%), Gaps = 16/316 (5%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
LT ++L + H ++K GF N S L+ + C G M +F +I
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG----GGMSDCRKVFEEI 302
Query: 92 DEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
EP +NT++ G+ + EF E+AL + +M G P++ +F + AC+ L + +G
Sbjct: 303 TEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQG 362
Query: 151 MQIHGHVFKVGFECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
QIH K + + V N+LI MY KC ++ A +F +M + + S +++IA +A
Sbjct: 363 KQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQ 422
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+G+ E L LF M E+ P +SVLSAC H G ++ G + ++++ +
Sbjct: 423 HGIEMESLHLFQWM-LERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEPE 480
Query: 270 VE--TSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
E + +ID+ + G L + L RM + + ++ ++ HG + A+ +++L
Sbjct: 481 AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540
Query: 327 REGLEPDDVVYVGVLS 342
+ LEP + VLS
Sbjct: 541 Q--LEPSNAAPYVVLS 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F L K C + L G +H K + N I +Y KC ++ +A F+ +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI-----LVSVLSACTH--- 245
+V S++AIIAA+A +LF ++ PE + L+S + C
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQI-------PEPDLVSYNTLISAYADCGETAP 123
Query: 246 -------------------LGALDLGKCTHGSLIRNISALN--------VIVETSLIDMY 278
L A+ C LI + ++ V V +L+ Y
Sbjct: 124 ALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYY 183
Query: 279 VKCGCLEKGLCLFRMMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
K G L+ +F M + +++++ MI H +G +AL +F EM+R GL D
Sbjct: 184 GKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243
Query: 338 VGVLSA 343
VL+A
Sbjct: 244 ASVLTA 249
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/512 (37%), Positives = 305/512 (59%), Gaps = 6/512 (1%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG--MQIHGH 156
+NT+IR ++ L LY +M RG+ D + + K+C +L L +Q+H +
Sbjct: 5 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFVVKSCIRLXGLYLLGGVQVHCN 64
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+FK G + D + +++++Y C++ A +F +M + +W+ +I+ N +
Sbjct: 65 IFKYGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEMPPRDTVAWNVMISCCIRNNRTRDA 124
Query: 217 LKLFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
L LF + N KC P++ + +L AC HL AL+ G+ HG ++ + + + +L
Sbjct: 125 LSLFDVLQNSSYKC-EPDDVTCLLLLQACAHLYALEFGERIHGYMMEHGYGGALNLSNAL 183
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
I MY +CGCL+K +F+ +K +++S MISGLAM+G G+EA+ F EMLR G+ PDD
Sbjct: 184 ISMYSRCGCLDKAXEVFKGTGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDD 243
Query: 335 VVYVGVLSACSHAGLVNEGLLCF-DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
GVLSACS++G+V+EG++ F DRM E+ + P V HYGC+VDL+G AG+L +A +LI
Sbjct: 244 QTLTGVLSACSYSGMVDEGMMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLI 303
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
SM + + WR+LL A ++H ++ +GE +L ++ + D+VLL N+Y+ A W
Sbjct: 304 MSMVEKPDSTTWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDHVLLLNIYSSAGHWE 363
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
VA++R M +K + +PG S +E+ V++FV D SH IYE + ++ QL+ G
Sbjct: 364 KVAEVRKLMKNKSIQTTPGCSTIELKGVVHEFVVDDVSHTRNHEIYETLDEINHQLRIAG 423
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y ++S L +D+ EK L HS+KLAIAF ++ G+ +R+A NLR+C DC + K
Sbjct: 424 YVVELSSELHKMDDKEKGYVLSHHSEKLAIAFGVLATPPGTTLRVANNLRICVDCFNFLK 483
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S +Y ++I+RD RFH F+ G CSC +YW
Sbjct: 484 HFSGVYNGDVILRDHNRFHHFRGGCCSCSNYW 515
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 34 CLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
CL +L+ C +L E +++H ++++ G+ ++ L++ S G +D A +F+
Sbjct: 145 CLLLLQACAHLYALEFGERIHGYMMEHGYGGALNLSNALISM--YSRCGCLDKAXEVFKG 202
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
++ +I G EA+ + EM G+ PD+ T + AC+ + EG
Sbjct: 203 TGNKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLTGVLSACSYSGMVDEG 262
Query: 151 M 151
M
Sbjct: 263 M 263
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 296/506 (58%), Gaps = 5/506 (0%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I + + + E+A L+ + V P+ ++ ++ +AC + L G QIH H K+G
Sbjct: 335 MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIG 394
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
E DLFV N+L++ Y KC ++ + IF + + SW+ I+ + +GL E L +F
Sbjct: 395 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFC 454
Query: 222 EMNNEK--CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
EM + C + S SVL AC ++ H S+ ++ + ++ SLID Y
Sbjct: 455 EMQAAQMPCTQVTYS---SVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYA 511
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG + L +F+ + ++ ++++ +ISG A+HGQ +AL +F M + +E +D+ +V
Sbjct: 512 KCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVA 571
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+LS CS GLVN GL FD M++++ I P+++HY C+V L+GRAG L +AL+ I +P
Sbjct: 572 LLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSA 631
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ +VWR+LLS+ +H N+ +G +A+ + +I + YVLLSNMYA A VA +R
Sbjct: 632 PSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLR 691
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M + G+ + PG S VE+ +++ F HP I M+ + + EGY PDI+
Sbjct: 692 KSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDIN 751
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
VL DVD+++K L HS++LA+A+ L+ G PIRI +NLR C DCHT +IS I
Sbjct: 752 VVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIV 811
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+REIIVRD RFH F+DG CSC DYW
Sbjct: 812 KREIIVRDINRFHHFEDGKCSCGDYW 837
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 48 KKVHAHVLKWGFF--WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
+ VH HV++ G + FCA+ L+ G + A +F ++ E F TL++
Sbjct: 79 RAVHGHVVRRGGVGRLDLFCANVLLNM--YGKLGPLASARRLFDRMPERNMVSFVTLVQA 136
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ +FE A L+ + G E + F + K + A +H +K+G + +
Sbjct: 137 HAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHN 196
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
FV + LI+ Y C V A +F + +K W+A+++ ++ N ++F +M
Sbjct: 197 AFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRV 256
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
C +P L SVL A L ++ LGK HG I+ ++ V +L+DMY KCG ++
Sbjct: 257 SGC-KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 315
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
F M+ + S MIS A Q ++A +F ++R + P++ VL AC+
Sbjct: 316 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 375
Query: 346 H 346
+
Sbjct: 376 N 376
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 18/251 (7%)
Query: 104 RGFVKEVEFEEAL-FLYNEMFERGVEP-----DNFTFPALFKACAKLQALKEGMQIHGHV 157
RGF + AL +L +E+ + P D+F + C + G +HGHV
Sbjct: 29 RGFAA---YAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHV 85
Query: 158 FKVG--FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ G DLF N L+NMYGK + A +F +M ++++ S+ ++ AHA G +
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 216 CLKLFGEMNNEKCWRPEES---ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
LF + W E +L ++L + A L H + N V +
Sbjct: 146 AAALFRRLR----WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGS 201
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LID Y C + +F + K + ++ M+S + + + A +FS+M G +P
Sbjct: 202 GLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKP 261
Query: 333 DDVVYVGVLSA 343
+ VL A
Sbjct: 262 NPFALTSVLKA 272
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 319/542 (58%), Gaps = 7/542 (1%)
Query: 69 LVATCALSHWGS---MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
L+ T L + + YAC +F + ++ LI GFV EA L+ +M
Sbjct: 241 LIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVE 300
Query: 126 GV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
G+ + + + CA L L G Q+H + K G DL NSL++MY K +
Sbjct: 301 GLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINE 360
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSAC 243
A+ F ++ K S+ A+++ NG E +F +M + C P+ + +VS++ AC
Sbjct: 361 ATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKM--QACNMEPDIATMVSLIPAC 418
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+HL AL GKC+HGS+I AL + SLIDMY KCG ++ +F M + ++++
Sbjct: 419 SHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWN 478
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI+G +HG GKEA ++F M +G PDDV ++ +++ACSH+GLV EG FD M +
Sbjct: 479 TMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHK 538
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y I+P ++HY C+VDL+ R G+L EA + IQSMP++ + VW +LL A ++H N+++G+
Sbjct: 539 YGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQ 598
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
++ + ++ ++VLLSN+++ A R+ + A++R KG +SPG+S +E+ ++
Sbjct: 599 VSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLH 658
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
FV D+SHP +IY + + +K GY D S VL+D++E+EK + L HS+KLAI
Sbjct: 659 AFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAI 718
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF ++ L++ I + +NLR+C DCHT K ++++ R IIVRD RFH FK+G CSC +
Sbjct: 719 AFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGN 778
Query: 604 YW 605
+W
Sbjct: 779 FW 780
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 39/337 (11%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F +I P A +N LIR + F A+ LY M V P+ +TFP +
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KAC+ L L+ G IH H G DLFV +LI++Y +C + A +F +M + V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A++A +A++G++ + +M + RP S LVS+L GAL G H
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 259 LIRNISALN---VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+R N V++ T+L+DMY KC L +F M + +T+S +I G + +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 316 KEALSIFSEMLREGL------------------------------------EPDDVVYVG 339
EA ++F +ML EGL D
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
+LS + AGL+NE + FD + ++ I GCV
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCV 384
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 158/342 (46%), Gaps = 18/342 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACA 142
A ++F ++ +N ++ G+ + A+ +M + G + P+ T +L A
Sbjct: 154 ARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLA 213
Query: 143 KLQALKEGMQIHGHVFKVGFECD---LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
+ AL +G IH + + E + + + +L++MY KC+++ +A +F M ++ +
Sbjct: 214 QHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT 273
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
WSA+I +E LF +M E + + S L C L L +G H +
Sbjct: 274 WSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALI 333
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ ++ SL+ MY K G + + F +A K ++Y ++SG +G+ +EA
Sbjct: 334 AKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAF 393
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHA-----GLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+F +M +EPD V ++ ACSH G + G + + LE I +
Sbjct: 394 LVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS----- 448
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
++D+ + G + + ++ MP + DVV W ++++ +H
Sbjct: 449 -LIDMYAKCGKIDLSRQVFDKMPAR--DVVSWNTMIAGYGIH 487
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 147/309 (47%), Gaps = 11/309 (3%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L + L+ C +L + ++HA + K G + +++L++ A + G ++ A
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKA--GLINEAT 362
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
F +I + L+ G V+ + EEA ++ +M +EPD T +L AC+ L
Sbjct: 363 MFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLA 422
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
AL+ G HG V G + + NSLI+MY KC K++ + +F +M + V SW+ +IA
Sbjct: 423 ALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA 482
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ +GL E LF M N+ + P++ + +++AC+H G + GK ++
Sbjct: 483 GYGIHGLGKEATTLFLGMKNQG-FAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGI 541
Query: 266 LNVIVE-TSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQ---GKEALS 320
L + ++D+ + G L++ + M K + + ++ +H GK+
Sbjct: 542 LPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSR 601
Query: 321 IFSEMLREG 329
I ++ EG
Sbjct: 602 IIQKLGPEG 610
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 309/527 (58%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F ++ E +NT+I G V ++ EA L+ M++ + + F +
Sbjct: 180 GMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMI 239
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+A A L + G Q+H K G D+FV +LI+MY KC +E A +F QM +K+
Sbjct: 240 RASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTV 299
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
W++IIA +A +G E L ++ EM + + + ++ C L +L+ K H
Sbjct: 300 GWNSIIAGYALHGYSEEALSMYYEMRDSGV-KIDNFTFSIIIRICARLASLEHAKQAHAG 358
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L+R+ L+++ T+L+D+Y K G +E +F MM K ++++ +I+G HG+G EA
Sbjct: 359 LVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEA 418
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F ML EG+ P+ V ++ VLSACS++GL + G F+ M +++I P HY C+++
Sbjct: 419 VEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIE 478
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GR G+L EA LI+ P + +W +LL+A +VH N E+G+ AA+ L+ + S+
Sbjct: 479 LLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSN 538
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YV+L N+Y R+ R + A + + +GL P S +E+ ++ Y F+S D+ H I
Sbjct: 539 YVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEI 598
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y+ + ++ ++ GY P +L DVDE E+R L HS+KLAIAF LI+ S +P++I
Sbjct: 599 YQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLY-HSEKLAIAFGLINTSDWTPLQI 657
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ R+C DCH+ KLI+++ REI+VRD RFH FKDG+CSC DYW
Sbjct: 658 VQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 34/320 (10%)
Query: 112 FEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ EAL L+ + G + D+ T+ AL AC L++++ ++ ++ G + D +++N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
++ M+ KC + A +F +M +K++ SW+ II G + E +LF M W+
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM-----WQ 225
Query: 231 ----PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ V+++ A LG + G+ H ++ +V V +LIDMY KCG +E
Sbjct: 226 DFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIED 285
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC-- 344
C+F M +K + ++ +I+G A+HG +EALS++ EM G++ D+ + ++ C
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345
Query: 345 ---------SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+HAGLV G IV +VDL + G + +A +
Sbjct: 346 LASLEHAKQAHAGLVRHG--------FGLDIVANT----ALVDLYSKWGRIEDAKHVFDM 393
Query: 396 MPIQQNDVVWRSLLSASKVH 415
MP +N + W +L++ H
Sbjct: 394 MP-HKNVISWNALIAGYGNH 412
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 217/618 (35%), Positives = 335/618 (54%), Gaps = 53/618 (8%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L++C +L+ +++HA ++ G P + L + S A + DE
Sbjct: 19 LLRSCARESSLDIGERLHATIITTGIAGAP---ETFLHNALLQFYASCGCAWQARKVFDE 75
Query: 94 -----PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
D+ TL+ FV+ +EAL ++ EM GV+PD T LF CA+L +
Sbjct: 76 IPHSHKDTVDWTTLMGCFVRHNVSDEALLIFVEMRRCGVKPDEVTLVCLFGGCARLGDVV 135
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI----- 203
G Q HG + K+G N++++MY K + A +F +M +SV SW+ I
Sbjct: 136 VGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVFYEMKGQSVVSWTVILDGVI 195
Query: 204 --------------------------IAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
IA + +GL E L EM + L
Sbjct: 196 RSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLC 255
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISA-LNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
S+L+AC+ G L +G+ H ++ LN++V T+++DMY KCG + F+ M
Sbjct: 256 SILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQ 315
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ ++++ M+SGLAMHG G+ AL IF +M +E +PDDV + VLSACSH+GLV++G
Sbjct: 316 RNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDVTFTSVLSACSHSGLVDQGCFY 374
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
F ++ Y I P V+HY C+VDL+GRAG L EA L++ MPI+ N+VV SLL + +H
Sbjct: 375 FGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHG 434
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
L++GE + L Q++ + ++LLSNMYA A + +R + +G+ + PG S +
Sbjct: 435 KLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSI 494
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS-------QVLRD--VDE 527
V +V++F + D+SHP +Y M+ +M +L+ GY+P+ + L D V++
Sbjct: 495 HVGGQVHQFSAGDKSHPRTREVYNMLDEMIPRLRLAGYAPNTALQTFAGCDSLEDDLVEQ 554
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK + L HS+KLAI F LI G P+ I +NLR+C DCH+ K++S IY REI++RD
Sbjct: 555 EEKEQALFSHSEKLAICFGLISTGPGVPLHIFKNLRICQDCHSAIKIVSKIYNREIVIRD 614
Query: 588 RKRFHRFKDGTCSCRDYW 605
R RFH FK+G+CSC DYW
Sbjct: 615 RNRFHCFKEGSCSCCDYW 632
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 321/582 (55%), Gaps = 12/582 (2%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L E T++ C NL+ +++H+ VLK GF + L+ A + G +D A
Sbjct: 256 LTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMD--AYNKAGQLDKAL 313
Query: 86 SIFRQID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
+F + + +I G ++ + A L++ M E GV P++ T+ + +
Sbjct: 314 DVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----V 369
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
QIH V K +EC V +L+ Y K E A +IFK +DQK V SWSA++
Sbjct: 370 SEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAML 429
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLIRNI 263
+A G + F +M +P E + S + AC A +DLG+ H I++
Sbjct: 430 TCYAQAGDCNGATNAFIKMTMHGL-KPNEFTISSAIDACASPAAGVDLGRQFHAISIKHR 488
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+ V ++L+ MY + G +E C+F D+ L+++ M+SG A HG ++AL +F
Sbjct: 489 CHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFR 548
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+M EG++ D + ++ V+ C+HAGLV EG FD M +Y I PT+ HY C+VDL RA
Sbjct: 549 QMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRA 608
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L E + LI+ MP +WR+LL A +VH N+E+G++AA+ L + + YVLLS
Sbjct: 609 GKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLS 668
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+Y+ A +W + ++R M +K + + G S +++ KV+ F++ D+SHP + IY +
Sbjct: 669 NIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLR 728
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
M +LK EGY PD S V DV ED+K L HS++LA+AF LI +P+ I +NLR
Sbjct: 729 AMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLR 788
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ D HT K++S I +REI++RD RFH FK G CSC D+W
Sbjct: 789 VSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDFW 830
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 166/344 (48%), Gaps = 26/344 (7%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+W S+ +F + + + +L+ G+++ + + L+ M GV P+ FTF +
Sbjct: 103 NWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSS 162
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ A + G +H K G +FV NSL+NMY KC VE A +F +M+ +
Sbjct: 163 VLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRD 222
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ SW+ ++A NG E L+LF + + ES +V++ C +L L L + H
Sbjct: 223 MVSWNTLMAGLVLNGRDLEALQLFHD-SRSSITMLTESTYSTVINLCANLKHLGLARQLH 281
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLAMHGQG 315
S++++ V T+L+D Y K G L+K L +F +M+ + ++++ MI G +G
Sbjct: 282 SSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDI 341
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
A ++FS M +G+ P+D+ Y +L+ S A + + +K Y PTV
Sbjct: 342 PLAAALFSRMREDGVAPNDLTYSTILTV-SEASFPPQ--IHAQVIKTNYECTPTV----- 393
Query: 376 VVDLMGRAGMLG--------EALELIQSMPIQQNDVV-WRSLLS 410
G A M+ EAL + + I Q DVV W ++L+
Sbjct: 394 -----GTALMVSYSKLCSTEEALSIFKM--IDQKDVVSWSAMLT 430
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/558 (37%), Positives = 314/558 (56%), Gaps = 4/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K++HA LK G + F + A S G A +F ++ +N I V
Sbjct: 78 KQIHAIALKLGQINDKFVGCS--AFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAV 135
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +A+ + E G EPD TF A ACA + L G Q+HG V + GFE D+
Sbjct: 136 LDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVS 195
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N +I++YGKC++VE A +F M +++ SW ++AA N + +F M ++
Sbjct: 196 VANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVF-LMGRKE 254
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ ++ SV+SA + L+ G+ H ++ ++ V ++L+DMY KCG +E
Sbjct: 255 GIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDC 314
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M ++ ++++ MISG A G A+++F EM E + + V + VLSACS
Sbjct: 315 EQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLSACSRG 373
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G V G F+ M+ YRI P +HY C+ D++GRAGM+ A E +Q MPI+ VW +
Sbjct: 374 GAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGA 433
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL+A +V+ E+G+IAA NLF+++ ++VLLSNM+A A RW + +R EM G+
Sbjct: 434 LLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWDEATLVRKEMKDVGI 493
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+ G S V KV+ F ++D SH I M+ ++ +++ GY PD + L D++E
Sbjct: 494 KKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEE 553
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
+EK + HS+K+A+AF LI L G PIRI +NLR+C DCH+ K IS I REIIVRD
Sbjct: 554 EEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFKFISGIVGREIIVRD 613
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFHRF+D CSCRD+W
Sbjct: 614 NNRFHRFRDSQCSCRDFW 631
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 166/349 (47%), Gaps = 16/349 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ LI G V+ F AL +++M ++P++FTFP FKA L G QIH
Sbjct: 26 WTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTALCLPFAGKQIHAIAL 85
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K+G D FV S +MY K A +F +M ++VA W+A I+ +G + +
Sbjct: 86 KLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAID 145
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F E P+ + L+AC LDLG+ HG +IR+ +V V +ID+Y
Sbjct: 146 KFIEFRRVG-GEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVY 204
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KC +E +F M + +++ M++ + + ++A +F +EG+E D +
Sbjct: 205 GKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVS 264
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH----YGCVVDLMGRAGMLGEALELIQ 394
V+SA +AG+ L F R + V+ +VD+ G+ G + + ++
Sbjct: 265 SVISA--YAGISG---LEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF-QINSHHPSDYVLL 442
MP ++N V W +++S ++++ A LF ++ S ++YV L
Sbjct: 320 EMP-ERNLVSWNAMISGYAHQGDVDM----AMTLFEEMQSEAVANYVTL 363
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 3/237 (1%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY K + A + + + V +W+A+I+ NG +S L F +M E +P +
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENI-KPNDF 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
A T L GK H ++ + V S DMY K G + LF M
Sbjct: 60 TFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+ ++ IS + G+ +A+ F E R G EPD + + L+AC+ A ++ G
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ + V ++D+ G+ + E E++ + ++N V W ++++A
Sbjct: 180 Q-LHGLVIRSGFEGDVSVANGIIDVYGKCKEV-ELAEMVFNGMGRRNSVSWCTMVAA 234
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/584 (34%), Positives = 320/584 (54%), Gaps = 34/584 (5%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
+ + C+ L +++HA G + F A++L+ A + G + A +F +I
Sbjct: 116 LFRACRALRPLRQLHAFAATSGAATDRFTANHLM--LAYADLGDLTAARELFERIPRRNV 173
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFER------------------------------- 125
+N L G++K + A L++EM ER
Sbjct: 174 MSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRRE 233
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G+ PD F ++F+ CA L+ + G Q+H +V + G + D+ V +SL +MY +C ++
Sbjct: 234 GMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEG 293
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
A+ + + S+ S + IIA NG L+ F M + + VS +S+C+
Sbjct: 294 EAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVA-ADVVTFVSAISSCSD 352
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
L AL G+ HG +++ V V T L+ MY +CGCL +F S M
Sbjct: 353 LAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAM 412
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
IS HG G++A+ +F +M+ G EP DV ++ +L ACSH+GL EG+ CF+ M Y
Sbjct: 413 ISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYG 472
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAA 425
+ P+V+HY CVVDL+GR+G L EA LI SMP+ + V+W++LLSA K N ++ E A
Sbjct: 473 MQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIA 532
Query: 426 KNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKF 485
K + +++ H + YVLLSN+ A ++RW DV+++R M + + PG S VE+ +++F
Sbjct: 533 KRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQF 592
Query: 486 VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAF 545
+ D SHP I E + +M +++ GYSPD+S VL D++++EK L HS+KLAIAF
Sbjct: 593 CTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAF 652
Query: 546 ALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
A + L +G PIR+ +NLR+C+DCH KL+S + REI+VRD K
Sbjct: 653 AFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDDK 696
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 44/348 (12%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
F LF+AC L+ L+ Q+H G D F N L+ Y + A +F+++
Sbjct: 113 FSHLFRACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 169
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWR--------------------- 230
+++V SW+ + + NG KLF EM N W
Sbjct: 170 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 229
Query: 231 -------PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
P+E L SV C L + G+ H ++R+ ++ V +SL MY++CGC
Sbjct: 230 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 289
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
L++G + RM+ ++ + +I+G +G + AL F M G+ D V +V +S+
Sbjct: 290 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 349
Query: 344 CSHAGLVNEGLLCFDR-MKLEY-RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
CS + +G + MK ++VP + C+V + R G LG++ E + +
Sbjct: 350 CSDLAALAQGQQIHGQVMKAGVDKVVPVMT---CLVHMYSRCGCLGDS-ERVFFGYCGSD 405
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQI--NSHHPSDYVLLSNMYA 447
+ +++SA H + G+ A + Q+ PSD L+ +YA
Sbjct: 406 TFLLSAMISAYGFHGH---GQKAIELFKQMMNGGAEPSDVTFLALLYA 450
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 45/245 (18%)
Query: 212 LWSECLKLFGEMNNE-KCWRPEESI--LVSVLSACTH--------LGALDLGKCTHG-SL 259
LWS+ +LF + + RP + + A T L DLG T L
Sbjct: 105 LWSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAAREL 164
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
I NV+ L Y+K G L LF M ++ T++ M++GL G +E+L
Sbjct: 165 FERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESL 224
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLVNEGL-------------- 354
F +M REG+ PD+ V C+ HA +V GL
Sbjct: 225 GFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 284
Query: 355 ---LCFDRMKLEYRIVPTVQHYGCVVDLMGRA--GMLGEALE---LIQSMPIQQNDVVWR 406
C + R++P++ C + GR G ALE +++S+ + + V +
Sbjct: 285 MRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFV 344
Query: 407 SLLSA 411
S +S+
Sbjct: 345 SAISS 349
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/562 (36%), Positives = 315/562 (56%), Gaps = 46/562 (8%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
Y ++FR+ + AF N L+R + L L++ R P +FTF L
Sbjct: 97 YPLALFRRANSTSAFASNNLLRVLPHPLP----LTLFSRFRRR--NPHSFTF-LLASISN 149
Query: 143 KLQALKE--------GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
L A G +H K G DLFV+N+L++ YG V +F ++ +
Sbjct: 150 HLNAAGPSASACSFLGSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPR 209
Query: 195 -KSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCW---------------------- 229
+ V +W+ ++A + G+ + ++F EM +E W
Sbjct: 210 VRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRN 269
Query: 230 ------RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
RP ++ +V+ LSA LG L+ GK H + R+ + + V +L+DMY KCGC
Sbjct: 270 MVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGC 329
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+ +F M + ++ MI GLA HG G++A+ +F + EGL P +V +VGVL+
Sbjct: 330 VAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNG 389
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CS +GLV EG F + +YRI P ++HYGC+VDL+GRAG++ EA+ELI+ M I + V
Sbjct: 390 CSRSGLVAEGRRYFKLIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPV 449
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W ++LS+ K H +++G L +++ H YVLLS +YA+A +W +V ++R M+
Sbjct: 450 LWGTILSSCKTHGLVDLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMS 509
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
S+G N+S G+SL+E KV+KF+ D H IY+ + + +L GY PD+S VL
Sbjct: 510 SRGTNKSAGWSLMEAHGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAGYVPDVSSVLH 569
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D+ E+EK +K HS++LAIA+ I L GSPIRI +NLR+C DCH ++K+++++++REI
Sbjct: 570 DIGEEEKVHAVKVHSERLAIAYGFIVLEAGSPIRIVKNLRVCGDCHEFSKMVTMVFQREI 629
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFH K+G CSC DYW
Sbjct: 630 IVRDGSRFHHMKEGKCSCLDYW 651
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 162/380 (42%), Gaps = 60/380 (15%)
Query: 61 WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYN 120
WN A + A G M A +F ++ ++TL+ G+VKE E E AL ++
Sbjct: 216 WNEVLAGYVRA-------GMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFR 268
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M E+GV P+ A A+L L+ G +H V + G + V +L++MY KC
Sbjct: 269 NMVEQGVRPNQAAVVTALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCG 328
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
V A +F M ++ V +W+A+I A++GL + ++LF +E P V VL
Sbjct: 329 CVAVAREVFDGMRRRDVFAWNAMICGLAAHGLGRDAVELFERFISEGL-SPTNVTFVGVL 387
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
+ C+ + G + +G F+++ +K ++
Sbjct: 388 NGCS-----------------------------------RSGLVAEGRRYFKLIVEKYRI 412
Query: 301 T-----YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
Y M+ L G EA+ + M + PD V++ +LS+C GLV+ G+
Sbjct: 413 EPEMEHYGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCKTHGLVDLGVS 469
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMG---RAGMLGEALELIQSMPIQ-QNDVVWRSLLSA 411
+++ + PT H G V L G +A E E+ + M + N SL+ A
Sbjct: 470 VGNKL---IELDPT--HSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 412 SKVHHNLEIGEIAAKNLFQI 431
H +G+ K+ QI
Sbjct: 525 HGKVHKFLVGDTYHKDSVQI 544
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 325/592 (54%), Gaps = 36/592 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VH + G + F + L+ A ++ A +F + + +L +V
Sbjct: 184 KEVHDDATRCGVMSDVFVGNALIH--AYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYV 241
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
K + + ++ EM GV+P+ T ++ ACA+L+ LK G +IHG + G +LF
Sbjct: 242 KCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLF 301
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--- 224
V ++L+++Y KC V A +F M + V SW+ ++ A+ N + + LF +M+
Sbjct: 302 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 361
Query: 225 ---NEKCW----------------------------RPEESILVSVLSACTHLGALDLGK 253
+E W +P E + S+L AC+ L +GK
Sbjct: 362 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGK 421
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + R+ ++ T+L+ MY KCG L +F MM K + ++ MI AMHG
Sbjct: 422 EIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHG 481
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
GKEAL +F +ML ++P+ V + GVLS CSH+ LV EG+ F+ M ++ + P HY
Sbjct: 482 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY 541
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
CVVD+ RAG L EA + IQ MP++ W +LL+A +V+ N+E+ +I+AK LF+I
Sbjct: 542 SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEP 601
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
++P +YV L N+ A+ W + +++R M +G+ ++PG S ++V KV+ FV D+S+
Sbjct: 602 NNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNI 661
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
D IY + ++ ++K GY PD VL+D+D++EK E L HS+KLA+AF +++L+
Sbjct: 662 ESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQ 721
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S IR+ +NLR+C DCH K +S + I+VRD RFH FK+G CSC+D W
Sbjct: 722 STIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F I +P +TLI EA+ +Y+ + ERG++PD F A
Sbjct: 112 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 171
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KACA ++H + G D+FV N+LI+ YGKC+ VE A +F + + V
Sbjct: 172 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 231
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCT 255
SW+++ + + G + + +F EM W +P + S+L AC L L GK
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMG----WSGVKPNPMTVSSILPACAELKDLKSGKEI 287
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ +N+ V ++L+ +Y KC + + +F +M + ++++ +++ + +
Sbjct: 288 HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEY 347
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ S+F +M R+G+ D+ + V+ C G E + F +M+
Sbjct: 348 EKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ 393
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F + Q + S +I+A ++GL +E +K++ + E+ +P+ + ++ AC
Sbjct: 117 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQ-ERGIKPDMPVFLAAAKACA 175
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
G K H R +V V +LI Y KC C+E +F + + ++++
Sbjct: 176 VSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 235
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
+ S G ++ + +F EM G++P+ + +L AC+ + G + +
Sbjct: 236 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE-IHGFAVRH 294
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+V + +V L + + EA + MP ++ V W +L+A
Sbjct: 295 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNGVLTA 340
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI + + G + LF + T S +IS L HG EA+ I+S + G++PD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 334 DVVYVGVLSACSHAG 348
V++ AC+ +G
Sbjct: 164 MPVFLAAAKACAVSG 178
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/525 (37%), Positives = 313/525 (59%), Gaps = 4/525 (0%)
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV-EPDNFTFPALFKAC 141
YAC +F + ++ LI GFV EA L+ +M G+ + + + C
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC 317
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A L L G Q+H + K G DL NSL++MY K + A+ F ++ K S+
Sbjct: 318 ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYG 377
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
A+++ NG E +F +M + C P+ + +VS++ AC+HL AL GKC+HGS+I
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKM--QACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVI 435
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
AL + SLIDMY KCG ++ +F M + ++++ MI+G +HG GKEA +
Sbjct: 436 IRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATT 495
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M +G PDDV ++ +++ACSH+GLV EG FD M +Y I+P ++HY C+VDL+
Sbjct: 496 LFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLL 555
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
R G+L EA + IQSMP++ + VW +LL A ++H N+++G+ ++ + ++ ++V
Sbjct: 556 ARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFV 615
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+++ A R+ + A++R KG +SPG+S +E+ ++ FV D+SHP +IY
Sbjct: 616 LLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYH 675
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ + +K GY D S VL+D++E+EK + L HS+KLAIAF ++ L++ I + +
Sbjct: 676 ELDNIMVDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTK 735
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCHT K ++++ R IIVRD RFH FK+G CSC ++W
Sbjct: 736 NLRVCGDCHTAIKYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 39/337 (11%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F +I P A +N LIR + F A+ LY M V P+ +TFP +
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KAC+ L L+ G IH H G DLFV +LI++Y +C + A +F +M + V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A++A +A++G++ + +M + RP S LVS+L GAL G H
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 259 LIRNISALN---VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+R N V++ T+L+DMY KC L +F M + +T+S +I G + +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 316 KEALSIFSEMLREGL------------------------------------EPDDVVYVG 339
EA ++F +ML EGL D
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
+LS + AGL+NE + FD + ++ I GCV
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCV 384
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 158/342 (46%), Gaps = 18/342 (5%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACA 142
A ++F ++ +N ++ G+ + A+ +M + G + P+ T +L A
Sbjct: 154 ARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLA 213
Query: 143 KLQALKEGMQIHGHVFKVGFECD---LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
+ AL +G IH + + E + + + +L++MY KC+++ +A +F M ++ +
Sbjct: 214 QHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVT 273
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
WSA+I +E LF +M E + + S L C L L +G H +
Sbjct: 274 WSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALI 333
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ ++ SL+ MY K G + + F +A K ++Y ++SG +G+ +EA
Sbjct: 334 AKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAF 393
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHA-----GLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+F +M +EPD V ++ ACSH G + G + + LE I +
Sbjct: 394 LVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS----- 448
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKVH 415
++D+ + G + + ++ MP + DVV W ++++ +H
Sbjct: 449 -LIDMYAKCGKIDLSRQVFDKMPAR--DVVSWNTMIAGYGIH 487
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 147/309 (47%), Gaps = 11/309 (3%)
Query: 29 LKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
L + L+ C +L + ++HA + K G + +++L++ A + G ++ A
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKA--GLINEAT 362
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
F +I + L+ G V+ + EEA ++ +M +EPD T +L AC+ L
Sbjct: 363 MFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLA 422
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
AL+ G HG V G + + NSLI+MY KC K++ + +F +M + V SW+ +IA
Sbjct: 423 ALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA 482
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ +GL E LF M N+ + P++ + +++AC+H G + GK ++
Sbjct: 483 GYGIHGLGKEATTLFLGMKNQG-FAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGI 541
Query: 266 LNVIVE-TSLIDMYVKCGCLEKGLCLFRMMADKCQL-TYSVMISGLAMHGQ---GKEALS 320
L + ++D+ + G L++ + M K + + ++ +H GK+
Sbjct: 542 LPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSR 601
Query: 321 IFSEMLREG 329
I ++ EG
Sbjct: 602 IIQKLGPEG 610
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/598 (35%), Positives = 330/598 (55%), Gaps = 32/598 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLK-WGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ L C LE +++HA+VLK N F AS LV A SH + A +F +
Sbjct: 276 SALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYA-SHE-RVGVARRVFDMV 333
Query: 92 DEPGAFD----FNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPALFKACAKLQA 146
PG +N ++ G+ + EEAL L+ M E GV P T + ACA+ +
Sbjct: 334 --PGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSET 391
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+HG+V K G + FVQN+L+++Y + +E A IF ++ + V SW+ +I
Sbjct: 392 FAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITG 451
Query: 207 HASNGLWSECLKLFGEM-----------------NNEKCWRPEESILVSVLSACTHLGAL 249
G + +L EM +E+ P L+++L C L A
Sbjct: 452 CVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAP 511
Query: 250 DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
GK HG +R+ ++ V ++L+DMY KCGCL +F + + +T++V+I
Sbjct: 512 AKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAY 571
Query: 310 AMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
MHG G EA+++F M+ +P++V ++ L+ACSH+G+V+ G+ F MK + + P
Sbjct: 572 GMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQP 631
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSM-PIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
T + C VD++GRAG L EA +I SM P +Q W S L A ++H N+ +GEIAA+
Sbjct: 632 TPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAER 691
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
LFQ+ S YVLL N+Y+ A W +++R M +G+++ PG S +E+ +++F++
Sbjct: 692 LFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMA 751
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
+ +HP ++ + + +++ +GY+PD S VL D++E EK L+ HS+KLAIAF L
Sbjct: 752 GESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGL 811
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ G+ IR+A+NLR+CNDCH K IS + REI++RD +RFH F DG CSC DYW
Sbjct: 812 LRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 188/413 (45%), Gaps = 36/413 (8%)
Query: 35 LTILKTCKNLEE----FKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIF 88
+++L C +L E ++ HA LK GF F + L++ A G +D A +F
Sbjct: 166 VSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYA--RLGLVDDAQMLF 223
Query: 89 RQIDEP-----GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
+D G +NT++ V+ EA+ + +M RGV PD TF + AC++
Sbjct: 224 GSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQ 283
Query: 144 LQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQM--DQKSVASW 200
L+ L G ++H +V K + FV ++L++MY E+V A +F + + + W
Sbjct: 284 LEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLW 343
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A++ +A G+ E L+LF M E P E+ + VL AC + HG ++
Sbjct: 344 NAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVL 403
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ A N V+ +L+D+Y + G +E +F + + ++++ +I+G + G +A
Sbjct: 404 KRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ 463
Query: 321 IFSEMLREG------------------LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ EM ++G + P++V + +L C+ +G +
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHG-YAM 522
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ + + +VD+ + G L + + +P ++N + W L+ A +H
Sbjct: 523 RHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWNVLIMAYGMH 574
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 179/393 (45%), Gaps = 23/393 (5%)
Query: 42 KNLEEFKKVHAHVLKWGFF--WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDF 99
++L + +H L+ + P A+ L+ A + G + A ++F + A F
Sbjct: 73 RSLIAVRSIHGAALRRDLLHGFTPAVANALL--TAYARCGDLTAALALFNAMPSRDAVTF 130
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEGMQIHGHVF 158
N+LI + AL +M G +FT ++ AC+ L + L+ G + H
Sbjct: 131 NSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFAL 190
Query: 159 KVGF--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-----SVASWSAIIAAHASNG 211
K GF + F N+L++MY + V+ A +F +D V +W+ +++ +G
Sbjct: 191 KNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSG 250
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-ALNVIV 270
E +++ +M + RP+ S L AC+ L L LG+ H ++++ A N V
Sbjct: 251 RCGEAIEVIYDM-VARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFV 309
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMM-ADKCQLT-YSVMISGLAMHGQGKEALSIFSEMLRE 328
++L+DMY + +F M+ QL ++ M+ G A G +EAL +F+ M E
Sbjct: 310 ASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAE 369
Query: 329 -GLEPDDVVYVGVLSACSHA-GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
G+ P + GVL AC+ + + + +K P VQ+ ++DL R G +
Sbjct: 370 AGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQN--ALMDLYARLGDM 427
Query: 387 GEALELIQSMPIQQNDVV-WRSLLSASKVHHNL 418
A + + I+ DVV W +L++ V ++
Sbjct: 428 EAARWIFAA--IEPRDVVSWNTLITGCVVQGHI 458
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 17/237 (7%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKV----GFECDLFVQNSLINMYGKCEKVEFA 185
D+F P K+ A L++L IHG + GF V N+L+ Y +C + A
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPA--VANALLTAYARCGDLTAA 115
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI-LVSVLSACT 244
A+F M + +++++IAA W L +M E P S LVSVL AC+
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG--HPLSSFTLVSVLLACS 173
Query: 245 HLGA-LDLGKCTHGSLIRN--ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ-- 299
HL L LG+ H ++N + +L+ MY + G ++ LF +
Sbjct: 174 HLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPG 233
Query: 300 ---LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+T++ M+S L G+ EA+ + +M+ G+ PD + + L ACS +++ G
Sbjct: 234 GGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLG 290
>gi|22328675|ref|NP_193307.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75161477|sp|Q8VYH0.1|PP313_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g15720
gi|18175616|gb|AAL59897.1| unknown protein [Arabidopsis thaliana]
gi|20465541|gb|AAM20253.1| unknown protein [Arabidopsis thaliana]
gi|332658240|gb|AEE83640.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 616
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/568 (38%), Positives = 318/568 (55%), Gaps = 14/568 (2%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H LK GF + F ++LV + ++ A +F ++ EP + ++I G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYV--KLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 110 VEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
+ + AL ++ +M E R V P+ +TF ++FKAC+ L + G IH + G ++ V
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+SL++MYGKC VE A +F M ++V SW+++I A+A N E ++LF N
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 227 -KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
R + +L SV+SAC+ LG L GK HG + R N +V TSL+DMY KCG L
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F + ++Y+ MI A HG G+ A+ +F EM+ + P+ V +GVL ACS
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI--QQNDV 403
H+GLVNEGL M +Y +VP +HY CVVD++GR G + EA EL +++ + +Q +
Sbjct: 349 HSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W +LLSA ++H +EI A+K L Q N S Y+ LSN YA + W D +R EM
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY------SPD 517
G + S +E VY F + D S I + +E ++K G+
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
S V DVDE+ K E + H ++LA+A+ L+HL GS IRI NLRMC DCH KLIS
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I EREI+VRD RFH FK+G+C+CRDYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 325/592 (54%), Gaps = 36/592 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+VH + G + F + L+ A ++ A +F + + +L +V
Sbjct: 98 KEVHDDATRCGVMSDVFVGNALIH--AYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYV 155
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
K + + ++ EM GV+P+ T ++ ACA+L+ LK G +IHG + G +LF
Sbjct: 156 KCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLF 215
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN--- 224
V ++L+++Y KC V A +F M + V SW+ ++ A+ N + + LF +M+
Sbjct: 216 VCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDG 275
Query: 225 ---NEKCW----------------------------RPEESILVSVLSACTHLGALDLGK 253
+E W +P E + S+L AC+ L +GK
Sbjct: 276 VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGK 335
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
H + R+ ++ T+L+ MY KCG L +F MM K + ++ MI AMHG
Sbjct: 336 EIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHG 395
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
GKEAL +F +ML ++P+ V + GVLS CSH+ LV EG+ F+ M ++ + P HY
Sbjct: 396 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY 455
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
CVVD+ RAG L EA + IQ MP++ W +LL+A +V+ N+E+ +I+AK LF+I
Sbjct: 456 SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEP 515
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
++P +YV L N+ A+ W + +++R M +G+ ++PG S ++V KV+ FV D+S+
Sbjct: 516 NNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNI 575
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
D IY + ++ ++K GY PD VL+D+D++EK E L HS+KLA+AF +++L+
Sbjct: 576 ESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGILNLNGQ 635
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S IR+ +NLR+C DCH K +S + I+VRD RFH FK+G CSC+D W
Sbjct: 636 STIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F I +P +TLI EA+ +Y+ + ERG++PD F A
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KACA ++H + G D+FV N+LI+ YGKC+ VE A +F + + V
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCT 255
SW+++ + + G + + +F EM W +P + S+L AC L L GK
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMG----WSGVKPNPMTVSSILPACAELKDLKSGKEI 201
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ +N+ V ++L+ +Y KC + + +F +M + ++++ +++ + +
Sbjct: 202 HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEY 261
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
++ S+F +M R+G+ D+ + V+ C G E + F +M+
Sbjct: 262 EKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ 307
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F + Q + S +I+A ++GL +E +K++ + E+ +P+ + ++ AC
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQ-ERGIKPDMPVFLAAAKACA 89
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
G K H R +V V +LI Y KC C+E +F + + ++++
Sbjct: 90 VSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTS 149
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
+ S G ++ + +F EM G++P+ + +L AC+ + G + +
Sbjct: 150 LSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE-IHGFAVRH 208
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+V + +V L + + EA + MP ++ V W +L+A
Sbjct: 209 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNGVLTA 254
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI + + G + LF + T S +IS L HG EA+ I+S + G++PD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 334 DVVYVGVLSACSHAG 348
V++ AC+ +G
Sbjct: 78 MPVFLAAAKACAVSG 92
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 303/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + F + ++ G+V+ +EA ++EM + + ++ A+
Sbjct: 246 GDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEISYNAML 301
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ + M I G +F+ ++ N++I YG+ + A +F M Q+
Sbjct: 302 AGYVQYKK----MVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV 357
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+AII+ +A NG + E L +F EM + S LS C + AL+LGK HG
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGE-SSNRSTFSCALSTCADIAALELGKQVHGQ 416
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+++ V +L+ MY KCG ++ +F + +K ++++ MI+G A HG G++A
Sbjct: 417 VVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQA 476
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F M + G++PD++ VGVLSACSH+GL++ G F M +Y + PT +HY C++D
Sbjct: 477 LVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMID 536
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA L+++MP W +LL AS++H N E+GE AA+ +F++ +
Sbjct: 537 LLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 596
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW DV K+R++M G+ + G+S VEV K++ F D HP D I
Sbjct: 597 YVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRI 656
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + +++ +++ EGY VL DV+E+EK LK HS+KLA+AF ++ + G PIR+
Sbjct: 657 YAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRV 716
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I R II+RD RFH F +G CSC DYW
Sbjct: 717 MKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 142/363 (39%), Gaps = 87/363 (23%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G D A +F + + +N +I G+++ +F A L+++M ER
Sbjct: 60 GHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPER------------- 106
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
DLF N ++ Y + ++ A +F M +K V
Sbjct: 107 --------------------------DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV 140
Query: 199 SWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+A+++ +A NG E ++F +M N W +L+A H G L +
Sbjct: 141 SWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWN-------GLLAAYVHNGRLKEAR--- 190
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
L + S +I L+ YVK L LF M + ++++ MISG A G
Sbjct: 191 -RLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLS 249
Query: 317 EALSIFSEMLREGLEP--DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI-------- 366
+A +F+E P D + ++S G+V+E FD M ++ I
Sbjct: 250 QAKRLFNE------SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAG 303
Query: 367 ----------------VP--TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
+P + + ++ G+ G + +A +L MP Q++ V W ++
Sbjct: 304 YVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMP-QRDCVSWAAI 362
Query: 409 LSA 411
+S
Sbjct: 363 ISG 365
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 308/528 (58%), Gaps = 3/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
GS++ + +F + + T++ F + EAL + E+ + G+ D+ ++
Sbjct: 416 GSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSIL 475
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ C L+++ Q+H + + G DL ++N LI++YG+C + + + +F+++++K +
Sbjct: 476 ETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIV 534
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+++I +NG + + LF EM +P+ LVS+L A L +L GK HG
Sbjct: 535 SWTSMINCCTNNGRLNGAVFLFTEMQKANI-QPDSVALVSILVAIAGLSSLTKGKQVHGF 593
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LIR + V +SL+DMY CG + + +F K + ++ MI+ MHG GK+A
Sbjct: 594 LIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQA 653
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F ML+ GL PD V ++ +L ACSH+ LV EG D M +YR+ P +HY CVVD
Sbjct: 654 IDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVD 713
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
++GR+G EA E I++MP+ VW +LL A +VH N + +AA L ++ +P +
Sbjct: 714 ILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGN 773
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y+L+SN++A +W + + RT MA +GL ++P S +E+ ++ F S D H + I
Sbjct: 774 YILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAI 833
Query: 499 YEMIHQMEWQLKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
+ + ++ L+ E GY D VL D E+EK + L HS+++AIAF LI G PIR
Sbjct: 834 HLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIR 893
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IA+NLR+C DCH +TKL+S ++ER+I+VRD RFH F G+CSC D+W
Sbjct: 894 IAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDFW 941
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 197/391 (50%), Gaps = 24/391 (6%)
Query: 35 LTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ +L+ C L +++HA +LK G N C + LV + +G +D A +F QI
Sbjct: 271 VAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVM---YAKYGRVDSALRVFGQI 327
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
E +N+++ +V+ + EA+ + EM + G +PD+ +L A L L G
Sbjct: 328 AEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGR 387
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+ H + K DL V N+L++MY KC +E ++ +F+ M + SW+ I+A A +
Sbjct: 388 EFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSS 447
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
SE L++ E+ E + ++ S+L C L ++ L K H IRN L++I+E
Sbjct: 448 RHSEALEMILELQKEGIM-VDSMMIGSILETCCGLKSISLLKQVHCYAIRN-GLLDLILE 505
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
LID+Y +CG + L LF+ + K ++++ MI+ +G+ A+ +F+EM + ++
Sbjct: 506 NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565
Query: 332 PDDVVYVGVLSACSHAGLVN-------EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
PD V V +L A AGL + G L +E +V + +VD+ G
Sbjct: 566 PDSVALVSILVAI--AGLSSLTKGKQVHGFLIRRNFPIEGPVVSS------LVDMYSGCG 617
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ A+ + + ++ V+W ++++A+ +H
Sbjct: 618 SMNYAIRVFERAKC-KDVVLWTAMINATGMH 647
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 183/374 (48%), Gaps = 16/374 (4%)
Query: 46 EFKKVHAHVLKWGFFW---NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
E ++VHAH + G + F A+ LV G +D A +F + F +N L
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFM--YGRCGRVDDARRLFNGMPARTVFSWNAL 132
Query: 103 IRGFVKEVEFEEALFLYNEMFER---GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
+ ++ EA+ +Y M G PD T ++ KAC + G ++HG K
Sbjct: 133 VGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVK 192
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWSAIIAAHASNGLWSECL 217
VG + V N+LI MY KC ++ A +F+ Q D + VASW+++++ NG E L
Sbjct: 193 VGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEAL 252
Query: 218 KLFGEMNNEKCWRPEESIL-VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
LF M + P S V+VL C LG L LG+ H +L++ S LN+ L+
Sbjct: 253 ALFRGM--QSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV- 309
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY K G ++ L +F +A+K ++++ M+S + EA+ F EML+ G +PD
Sbjct: 310 MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHAC 369
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V + SA H +N G F ++ R+ +Q ++D+ + G + + ++ +SM
Sbjct: 370 VVSLSSALGHLSRLNNGRE-FHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM 428
Query: 397 PIQQNDVVWRSLLS 410
I+ + + W ++L+
Sbjct: 429 GIRDH-ISWTTILA 441
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 307/539 (56%), Gaps = 34/539 (6%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +I G+V ++EAL + M G+E D FT+P++ +ACA L+ G Q+H +V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS--------- 209
+ + NSL+++Y KC K + A AIF++M K + SW+A+++ + S
Sbjct: 314 RRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 210 ----------------------NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
NG E LKLF M E + P + + +C LG
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG-FEPCDYAFSGAIKSCAVLG 431
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
A G+ H L++ ++ +LI MY KCG +E+ +FR M ++++ +I+
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIA 491
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
L HG G EA+ ++ EML++G+ PD + + VL+ACSHAGLV++G FD M+ YRI
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
P HY ++DL+ R+G +A +I+S+P + +W +LLS +VH N+E+G IAA
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
LF + H Y+LLSNM+A +W +VA++R M +G+ + S +E+ +V+ F+
Sbjct: 612 LFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLV 671
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED-EKRERLKGHSQKLAIAFA 546
D SHP + +Y + + +++ GY PD S VL DV+ D K + L HS+K+A+AF
Sbjct: 672 DDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFG 731
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
L+ L G+ IRI +NLR C DCH + + +S + +R+II+RDRKRFH F++G CSC ++W
Sbjct: 732 LMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 203/491 (41%), Gaps = 113/491 (23%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
NLRL CL + +T +L+ + VH +++ +GF + L+ S ++YA
Sbjct: 18 NLRL----CLPLRRT--SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKS--SELNYAR 69
Query: 86 SIFRQIDEP----------------------GAFD-----------FNTLIRGFVKEVEF 112
+F +I EP G F+ +N +I GF +
Sbjct: 70 QLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDG 129
Query: 113 EEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLFVQNS 171
A+ L+ +M G +PDNFTF ++ A + K+ +Q H K G V N+
Sbjct: 130 YSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNA 189
Query: 172 LINMYGKCEK----VEFASAIFKQMDQKSVASWS-------------------------- 201
L+++Y KC + A +F ++ +K SW+
Sbjct: 190 LVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNM 249
Query: 202 ------AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
A+I+ + + G + E L++ M + +E SV+ AC G L LGK
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI-ELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC-------------------------- 289
H ++R + + SL+ +Y KCG ++
Sbjct: 309 HAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 290 -----LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F+ M +K L++ +MISGLA +G G+E L +FS M REG EP D + G + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ G G ++ L+ ++ ++ + + G++ EA ++ ++MP + V
Sbjct: 428 AVLGAYCNGQQYHAQL-LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVS 485
Query: 405 WRSLLSASKVH 415
W +L++A H
Sbjct: 486 WNALIAALGQH 496
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 1/175 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A IF+++ E + +I G + EE L L++ M G EP ++ F
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
K+CA L A G Q H + K+GF+ L N+LI MY KC VE A +F+ M
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
SW+A+IAA +G +E + ++ EM +K RP+ L++VL+AC+H G +D G+
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEM-LKKGIRPDRITLLTVLTACSHAGLVDQGR 538
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/530 (37%), Positives = 310/530 (58%), Gaps = 4/530 (0%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+G +D A +F+Q+ + T+I G + EAL L+ M ++ + F
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ ACA A G+Q+HG + K+GF + +V SLI Y C+++ + +F + +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
VA W+A+++ ++ N + L +F M P +S S L++C+ LG LD GK H
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
G ++ + V SL+ MY G + + +F + K ++++ +I G A HG+GK
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR-IVPTVQHYGC 375
A IF +M+R EPD++ + G+LSACSH G + +G F M I +QHY C
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD++GR G L EA ELI+ M ++ N++VW +LLSA ++H +++ GE AA +F ++S
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
+ YVLLSN+YA A RW +V+K+R +M G+ + PG S V + K ++F S D+ H +
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS- 588
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
IYE + + +LK GY+PD L DV++++K E L HS++LAIAF LI+ +GS
Sbjct: 589 -RIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ + +NLR+C DCHT KLIS + REI++RD RFH FK+GTCSC DYW
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 56/329 (17%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C N F +VH ++K GF + + +++L+ A + + + +F +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA--NCKRIGDSRKVFDEKVH 288
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ L+ G+ + E+AL +++ M + P+ TF + +C+ L L G ++
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG K+G E D FV NSL+ MY V A ++F ++ +KS+ SW++II A +G
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 214 SECLKLFGEM---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+FG+M N E P+E +LSAC+H
Sbjct: 409 KWAFVIFGQMIRLNKE----PDEITFTGLLSACSH------------------------- 439
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMA------DKCQLTYSVMISGLAMHGQGKEALSIFSE 324
CG LEKG LF M+ D+ Y+ M+ L G+ KEA +
Sbjct: 440 ----------CGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M+ ++P+++V++ +LSAC V+ G
Sbjct: 490 MV---VKPNEMVWLALLSACRMHSDVDRG 515
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 9/270 (3%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A ++F ++ +N++I G V+ + A+ L++EM ER V ++ A+ C +
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFR 140
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+ + ++ +++ + D NS+++ Y + KV+ A +FKQM K+V SW+ +
Sbjct: 141 SGKVDQAERL---FYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTM 196
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I N E L LF M C + V++AC + A +G HG +I+
Sbjct: 197 ICGLDQNERSGEALDLFKNM-LRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
V SLI Y C + +F + ++ ++SG +++ + ++ALSIFS
Sbjct: 256 FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFS 315
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
MLR + P+ + L++CS G ++ G
Sbjct: 316 GMLRNSILPNQSTFASGLNSCSALGTLDWG 345
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 117/255 (45%), Gaps = 25/255 (9%)
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+I Y + ++ A +F +M + V SW+++I+ G + +KLF EM P
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-------P 124
Query: 232 EESIL--VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
E S++ ++++ C G +D + L + + S++ Y++ G ++ L
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAE----RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALK 180
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS---- 345
LF+ M K ++++ MI GL + + EAL +F MLR ++ + V++AC+
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 346 -HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
H G+ GL+ +KL + V ++ +G++ ++ + + V
Sbjct: 241 FHMGIQVHGLI----IKLGFLYEEYVS--ASLITFYANCKRIGDSRKVFDE-KVHEQVAV 293
Query: 405 WRSLLSASKVHHNLE 419
W +LLS ++ E
Sbjct: 294 WTALLSGYSLNKKHE 308
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C HL + + + + + + +V + T +I Y + L L LF M + +++
Sbjct: 43 CNHLLSRRIDEARE--VFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MISG G A+ +F EM + V + +++ C +G V++ F +M
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMP- 155
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V + +V + G + +AL+L + MP +N + W +++
Sbjct: 156 ----VKDTAAWNSMVHGYLQFGKVDDALKLFKQMP-GKNVISWTTMI 197
>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
Length = 610
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/568 (35%), Positives = 322/568 (56%), Gaps = 10/568 (1%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
+ L E ++VHA ++ G+ + A+ LV A G+++ A ++ + E +
Sbjct: 49 RALREGRQVHARMVTAGYRPALYLATRLVIMYA--RCGALEDAHNVLDGMPERNVVSWTA 106
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM--QIHGHVFK 159
+I G+ + EA L+ M G EP+ FT ++ +C Q + + Q+H K
Sbjct: 107 MISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIK 166
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
FE +FV +SL++MY + E ++ A +F + + V S++ I++ + GL E L L
Sbjct: 167 KNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNL 226
Query: 220 FGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F ++ NE +C + S+L++ LS L ++D GK HG ++R + ++ SLIDM
Sbjct: 227 FRQLYNEGMQCNQVTFSVLLNALSG---LSSMDYGKQVHGLILRRELPFFMALQNSLIDM 283
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y KCG L +F M ++ ++++ M+ G HG E + +F M + ++PD V
Sbjct: 284 YSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTL 342
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
+ VL SH GLV+EGL FD + E + QHYGCV+DL+GR+G L +AL LIQ MP
Sbjct: 343 LAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMP 402
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
Q +W SLL A +VH N+ +GE A+ LF I + +YV+LSN+YA A+ W DV +
Sbjct: 403 FQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARMWKDVFR 462
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
+R M K + + PG S + + + ++ F S +R HP ++I I+++ +K G+ PD
Sbjct: 463 LRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKAAGFVPD 522
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
+S VL DVD+++K L GHS+KLAI F L+ I++ +NLR+C DCH + K +S
Sbjct: 523 LSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAKFVSK 582
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+Y REI +RD+ RFH +G C+C DYW
Sbjct: 583 VYGREISLRDKNRFHLITEGACTCGDYW 610
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 144/285 (50%), Gaps = 7/285 (2%)
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD 193
+ A C +AL+EG Q+H + G+ L++ L+ MY +C +E A + M
Sbjct: 38 YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG- 252
+++V SW+A+I+ ++ N +E LF M C P E L SVL++CT +
Sbjct: 98 ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGC-EPNEFTLASVLTSCTGSQGIHQHQ 156
Query: 253 -KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
K H I+ L++ V +SL+DMY + +++ +F M+ + ++Y+ ++SG
Sbjct: 157 IKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTR 216
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR-MKLEYRIVPTV 370
G +EAL++F ++ EG++ + V + +L+A S ++ G ++ E +
Sbjct: 217 LGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMAL 276
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
Q+ ++D+ + G L + + +MP +++ V W ++L H
Sbjct: 277 QN--SLIDMYSKCGKLLYSRRVFDNMP-ERSVVSWNAMLMGYGRH 318
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/567 (35%), Positives = 318/567 (56%), Gaps = 9/567 (1%)
Query: 42 KNLEEFKKVHAHVLKW---GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD 98
K LEE +++H +W G P SNL+ GS+ A +F + F
Sbjct: 55 KALEEGRRIH----RWMDSGTLDRPRFLSNLLVD-MYGKCGSLVEAKRVFDAMQHKNVFS 109
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ L+ GFV+ EA+ L++ M + G PD +C +AL +G +IH
Sbjct: 110 WTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAA 169
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
G + DL N++INMYGKC + A A+F +M +K+V SWS +IAA N L E L
Sbjct: 170 SCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALL 229
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
F M E + VSVL A T +GAL+LGK H ++ +++V +L++MY
Sbjct: 230 FFKLMQQEG-MELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMY 288
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
KCG + +F M +K ++++ M++ +G+ +EAL++F M EG+ P+D+ +V
Sbjct: 289 GKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFV 348
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L CSH+G + + F M+ ++ I P H+GC++D++GR+G L EA ELIQ+MP+
Sbjct: 349 TILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPV 408
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ V+W SLL A H + + AA+ FQ + Y++LSN+YA ++W + AK+
Sbjct: 409 PADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKV 468
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M G+ + G S +E+ ++V++FV+ D HP I++ + ++ +++ +GY PD
Sbjct: 469 RKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDR 528
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
V+ ++E+EK E L HS+KLA+AF + +P+ I +NLR+C+DCH+ K IS +
Sbjct: 529 KVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGV 588
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
R I VRD RFH F G CSC DYW
Sbjct: 589 EGRRITVRDSNRFHHFDRGECSCGDYW 615
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 152/315 (48%), Gaps = 14/315 (4%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
L + CA +AL+EG +IH + + F+ N L++MYGKC + A +F M K+
Sbjct: 47 LIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKN 106
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+ ++A +G E ++LF M E P+ L+ + +C AL G+ H
Sbjct: 107 VFSWTMLMAGFVQSGRGVEAIQLFHRMCQEG-ELPDRVALLKFIDSCGAAKALSQGREIH 165
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ +++ ++I+MY KCG + + +F M +K +++S MI+ +
Sbjct: 166 SAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELAD 225
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV-----PTVQ 371
EAL F M +EG+E D + YV VL A + G + G L RIV ++
Sbjct: 226 EALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELG------KALHVRIVYAGLDTSIV 279
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
+V++ G+ G +A ++ SM +++N V W ++L+A + +A + +
Sbjct: 280 VGNTLVNMYGKCGSPDDARDVFDSM-VEKNVVSWNAMLAAYG-QNGRSREALALFDSMDL 337
Query: 432 NSHHPSDYVLLSNMY 446
P+D ++ +Y
Sbjct: 338 EGVRPNDITFVTILY 352
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 330/581 (56%), Gaps = 14/581 (2%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK C L +K +H LK GF ++LV S G ++ A +FR+I
Sbjct: 112 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM--YSKCGRINEAEKVFRRIV 169
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE--PDNFTFPALFKACAKLQALKEG 150
+ +N +I GFV +AL + M E ++ PD FT +L KAC+ + G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 151 MQIHGHVFKVGFEC--DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
QIHG + + GF C + SL+++Y KC + A F Q+ +K++ SWS++I +A
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + E + LF + E + + L S++ L GK ++ S L
Sbjct: 290 QEGEFVEAMGLFKRLQ-ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V S++DMY+KCG +++ F M K ++++V+I+G HG GK+++ IF EMLR
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+EPD+V Y+ VLSACSH+G++ EG F ++ + I P V+HY CVVDL+GRAG L E
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A LI +MPI+ N +W++LLS +VH ++E+G+ K L +I++ +P++YV++SN+Y +
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A W + R KGL + G S VE+ R+V+ F S + SHP I E + + E +
Sbjct: 529 AGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERR 588
Query: 509 LKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH--LSQ-GSPIRIARNLRM 564
L+ E GY + L D+D++ K E L+ HS+KLAI AL L+Q G IR+ +NLR+
Sbjct: 589 LREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRV 648
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH + K +S I + +VRD RFH F+DG CSC DYW
Sbjct: 649 CVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 306/564 (54%), Gaps = 40/564 (7%)
Query: 79 GSMDYACSIFRQIDEPGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
G + A S+F ++D G FD +N +I G+V EA L+ M V D FTF +
Sbjct: 242 GDVGAARSVFEEVD--GKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTS 299
Query: 137 LFKACAKLQALKEGMQIHGHVFKV--GF--ECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ ACA + G +HG + ++ F E L V N+L+ Y KC + A IF M
Sbjct: 300 VLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM 359
Query: 193 DQKSVASWSAI-------------------------------IAAHASNGLWSECLKLFG 221
K V SW+ I ++ + G + LKLF
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M +E +P + ++AC LGAL GK HG +++ + +LI MY +C
Sbjct: 420 KMRSENV-KPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARC 478
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +++ +F +M + ++++ MIS L HG G+EAL +F M+ EG+ PD + ++ VL
Sbjct: 479 GAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVL 538
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+AC+H+GLV+EG F+ MK ++ I+P HY ++DL+GRAG +GEA +LI++MP +
Sbjct: 539 TACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPT 598
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W ++LS + ++E+G AA LF++ H Y+LLSN Y+ A W D A++R
Sbjct: 599 PSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKL 658
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ + PG S +E KV+ F+ D HP +Y+ + + +++ GY PD V
Sbjct: 659 MRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVV 718
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L D++ +K L HS++LA+ F L++L G+ + + +NLR+C+DCH +S R
Sbjct: 719 LHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGR 778
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EI+VRD +RFH FKDG CSC +YW
Sbjct: 779 EIVVRDVRRFHHFKDGECSCGNYW 802
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 198/484 (40%), Gaps = 92/484 (19%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCA 66
LH LL + P P L LRL L+ + + A + P A
Sbjct: 43 LHARLLTSALLHAPPHPHLTLRLIHLYTLS-----------RDLPAAATLFCADPCPVSA 91
Query: 67 SNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMF 123
++LVA A + + A S F + P D N +I + + A+ ++ +
Sbjct: 92 TSLVAAYAAA--DRLPAAVSFFDAV-PPARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148
Query: 124 ERG-VEPDNFTFPALFKACAKLQ--ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
G + PD+++F AL A L +++ Q+H V K G L V N+L+ +Y KCE
Sbjct: 149 ASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCE 208
Query: 181 KVE----------------------------------FASAIFKQMDQKSVASWSAIIAA 206
E A ++F+++D K W+A+I+
Sbjct: 209 SPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISG 268
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR----- 261
+ +G+ E +LF M E+ +E SVLSAC ++G GK HG +IR
Sbjct: 269 YVHSGMAVEAFELFRRMVLERVPL-DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327
Query: 262 ------------------------------NISALNVIVETSLIDMYVKCGCLEKGLCLF 291
N++ +V+ +++ YV+ CL+K + +F
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
M K +L++ VM+SG G ++AL +F++M E ++P D Y G ++AC G +
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALK 447
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + ++ + ++ + R G + EA + MP + V W +++SA
Sbjct: 448 HGKQLHGHI-VQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVSWNAMISA 505
Query: 412 SKVH 415
H
Sbjct: 506 LGQH 509
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 18 EPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHV-LKWGFFWNPFCASNLVATCALS 76
+P PE L + +T C N+ +++ ++ LK WN + + ++C
Sbjct: 324 QPNFVPEAALPVN-NALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSC--- 379
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+D A +F ++ + ++ G+V E+AL L+N+M V+P ++T+
Sbjct: 380 ----LDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAG 435
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
AC +L ALK G Q+HGH+ ++GFE N+LI MY +C V+ A +F M
Sbjct: 436 AIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNID 495
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
SW+A+I+A +G E L+LF M E + P+ ++VL+AC H G +D G
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIY-PDRISFLTVLTACNHSGLVDEGFRYF 554
Query: 257 GSLIRNISALNVIVE-TSLIDMYVKCGCLEKGLCLFRMM 294
S+ R+ + T LID+ + G + + L + M
Sbjct: 555 ESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTM 593
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 329/569 (57%), Gaps = 13/569 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
T+LK C K L + + VHAH+L+ F + + N+ A C GS++ A +F
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-----GSLEEARKVFE 119
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + + TLI G+ + +AL +N+M G P+ FT ++ KA A +
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+HG K GF+ ++ V ++L+++Y + ++ A +F ++ ++ SW+A+IA HA
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L+LF M + +RP S+ AC+ G L+ GK H +I++ L
Sbjct: 240 RSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+DMY K G + +F +A + ++++ +++ A HG GKEA+ F EM R G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+++ ++ VL+ACSH+GL++EG ++ MK + IVP HY VVDL+GRAG L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L I+ MPI+ +W++LL+A ++H N E+G AA+++F+++ P +V+L N+YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW D A++R +M G+ + P S VE+ ++ FV+ D HP + I ++ ++
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY PD S V+ VD+ E+ L+ HS+K+A+AFAL++ GS I I +N+R+C DCH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGT 598
T KL S + REIIVRD RFH FKD +
Sbjct: 598 TAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERG---------VEPDNFTFPALFKACAKLQALKE 149
N+L ++ E E F N++ R + D + L K C + L +
Sbjct: 19 LNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQ 78
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G +H H+ + F D+ + N+L+NMY KC +E A +F++M Q+ +W+ +I+ ++
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ + L F +M + P E L SV+ A G HG ++ NV
Sbjct: 139 HDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V ++L+D+Y + G ++ +F + + ++++ +I+G A ++AL +F MLR+G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
P Y + ACS G + +G M K ++V + ++D+ ++G + +
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSIHD 315
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A ++ + +++ V W SLL+A H
Sbjct: 316 ARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/531 (37%), Positives = 310/531 (58%), Gaps = 6/531 (1%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
+G +D A +F+Q+ + T+I G + EAL L+ M ++ + TF
Sbjct: 171 QFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTC 230
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ ACA A G Q+HG + K GF + +V SLI +Y C++ E + +F +M +
Sbjct: 231 VITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEK 290
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
VA W+A+++ ++ N + L +F EM P +S S L++C+ LG LD GK H
Sbjct: 291 VAVWTALLSGYSLNRKHEDALNVFSEMIRNSIL-PNQSTFASGLNSCSALGTLDWGKEIH 349
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
G ++ V SL+ MY G + + +F + K ++++ +I G A HG+GK
Sbjct: 350 GVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYRIVPTVQHYG 374
A IF +M+R EPD++ + G+LSACSH G + +G L + L + I +QHY
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNH-IDRKIQHYT 468
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
C+VD++GR G L EA +LI+SM ++ N++VW +LLSA ++H +++ GE AA +F ++S
Sbjct: 469 CMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSK 528
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
+ YVLLSN+YA A RW V+K+R +M KG+ + PG S V + K ++F S DR H
Sbjct: 529 SSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCL 588
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
I+E + + +LK GY PD L DV++++K E L HS++LAIAF LI+ +GS
Sbjct: 589 --RIFEKLEFLREKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGS 646
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ + +NLR+C DCHT KLIS + +I++RD RFH FK+G CSC DYW
Sbjct: 647 TVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 164/375 (43%), Gaps = 66/375 (17%)
Query: 1 MTRTSVLHQSLLLTQPEEPPK-GPELNLRLKEQEC---------LTILKTCKNLEEF--- 47
M R +V+ + ++ ++ + G LNL C ++ C N F
Sbjct: 185 MPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMG 244
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+VH ++K GF + + ++L+ A + + + +F ++ + L+ G+
Sbjct: 245 TQVHGFIIKSGFLYEEYVTASLITLYA--NCKRTEDSRKVFGEMVHEKVAVWTALLSGYS 302
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ E+AL +++EM + P+ TF + +C+ L L G +IHG K+G F
Sbjct: 303 LNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAF 362
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM---N 224
V NSL+ MY V A ++F ++ +KS+ SW++II A +G +FG+M N
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
E P+E +LSAC+H CG L
Sbjct: 423 KE----PDEITFTGLLSACSH-----------------------------------CGFL 443
Query: 285 EKGLCLFRMMA------DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+KG LF ++ D+ Y+ M+ L G+ KEA + M+ ++P+++V++
Sbjct: 444 QKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMV---VKPNEMVWL 500
Query: 339 GVLSACSHAGLVNEG 353
+LSAC V+ G
Sbjct: 501 ALLSACRMHSDVDRG 515
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 151/322 (46%), Gaps = 26/322 (8%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A ++F ++ +N++I G V+ + + A+ +++EM ER V ++ A+ C +
Sbjct: 85 ALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSV----VSWTAMVNGCFR 140
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
+ + ++ + D+ N++++ Y + KV+ A +FKQM +K+V SW+ +
Sbjct: 141 FGMVDQAERLFCQMPVK----DIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTM 196
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
I N E L LF M C + V++AC + A +G HG +I++
Sbjct: 197 ICGLDQNERSGEALNLFKNM-LRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSG 255
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
V SLI +Y C E +F M + ++ ++SG +++ + ++AL++FS
Sbjct: 256 FLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFS 315
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL-MGR 382
EM+R + P+ + L++CS G ++ G + +G V L +G
Sbjct: 316 EMIRNSILPNQSTFASGLNSCSALGTLDWG----------------KEIHGVAVKLGLGT 359
Query: 383 AGMLGEALELIQSMPIQQNDVV 404
+G +L ++ S ND V
Sbjct: 360 VAFVGNSLVVMYSDSGNVNDAV 381
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+I+ Y + ++ A +F +M + V SW+++I+ G +K+F EM P
Sbjct: 72 MISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEM-------P 124
Query: 232 EESIL--VSVLSACTHLGALDLGKCTHGSL-IRNISALNVIVETSLIDMYVKCGCLEKGL 288
E S++ ++++ C G +D + + +++I+A N +V Y++ G ++ L
Sbjct: 125 ERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIAAWNAMVHG-----YLQFGKVDDAL 179
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
LF+ M K ++++ MI GL + + EAL++F MLR ++ + V++AC++A
Sbjct: 180 KLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAP 239
Query: 349 LVNEG 353
+ G
Sbjct: 240 AFHMG 244
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ + +V + T +I Y + L L LF M + ++++ MISG G A+ +F
Sbjct: 61 VPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMF 120
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGR 382
EM E V + +++ C G+V++ F +M V + + +V +
Sbjct: 121 DEM----PERSVVSWTAMVNGCFRFGMVDQAERLFCQMP-----VKDIAAWNAMVHGYLQ 171
Query: 383 AGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
G + +AL+L + MP ++N + W +++ + N GE A NLF+
Sbjct: 172 FGKVDDALKLFKQMP-RKNVISWTTMICG--LDQNERSGE--ALNLFK 214
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 331/582 (56%), Gaps = 41/582 (7%)
Query: 60 FWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEA 115
+N A N++ ++ + G ++ A F ++ E +N + + ++ +EA
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242
Query: 116 LFLYNEMFERGVEPDNFTFPALFKACAK-------------------------------L 144
L L+++M E G+ PD+ T+ +C+ +
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDM 302
Query: 145 QALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
A ++I ++F ++G + + N +I+ Y + K+ A +F M ++ V SW+++
Sbjct: 303 HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA +A NG + ++LF EM + +P+E + SVLSAC H+GAL L +
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN 422
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
L + SLI MY KCG + +F+ M + ++++ +ISG A +G GKEA+ +
Sbjct: 423 IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVL 482
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M EG+EPD V Y+GVL+ACSHAGL+NEG F ++ PTV HY C+VDL+GRA
Sbjct: 483 TMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRA 537
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA LIQSMP++ + V+ SLL+AS++H + +GE+AA LF++ + +YVLLS
Sbjct: 538 GELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLS 597
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA RW DV ++R M GL +S G S VE +V+KF DRSH +IY+++
Sbjct: 598 NIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLA 657
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E ++K G+ D S LRDV+E+EK E L HS+KLAI FAL+ G+ IR+ +NLR
Sbjct: 658 ELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLR 717
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT K+IS + REI+VRD RFH F +G CSC DYW
Sbjct: 718 ICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 51/381 (13%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
E + + N+ + ++ H H++ + + S L+ C H Y SIF
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLH-AHPAYVDSIFTSSP 61
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P A ++ +++ + + + + L+ + P F + L K A K G
Sbjct: 62 SPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKL-----AGKSGNL 116
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H +V K+G D F++N++++MY K +V+ A +F+QM ++++A W+++I+ +G
Sbjct: 117 FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGN 176
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E + LF M A N+I T
Sbjct: 177 ETEAVVLFNMM----------------------------------------PARNIITWT 196
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
S++ Y K G LE F M ++ ++++ M S A KEAL++F +ML EG+ P
Sbjct: 197 SMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITP 256
Query: 333 DDVVYVGVLSACSHAG--LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
DD +V +S+CS G + + +L RM + IV ++D+ + G L A
Sbjct: 257 DDTTWVVTISSCSSIGDPTLADSIL---RMIDQKHIVLNSFVKTALLDMHAKFGNLEIAR 313
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
+ + Q+N V W ++SA
Sbjct: 314 NIFDELGSQRNAVTWNIMISA 334
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 171/399 (42%), Gaps = 87/399 (21%)
Query: 51 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEV 110
HA+VLK G + F + ++ A + G +D A ++F Q+ E D+N++I G K
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKN--GQVDLARNLFEQMAERTLADWNSMISGCWKSG 175
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
EA+ L+N M R ++
Sbjct: 176 NETEAVVLFNMMPAR---------------------------------------NIITWT 196
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
S++ Y K +E A F +M ++SV SW+A+ +A+A E L LF +M E
Sbjct: 197 SMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI-T 255
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNIS----ALNVIVETSLIDMYVKCGCLEK 286
P+++ V +S+C+ +G L S++R I LN V+T+L+DM+ K G LE
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLAD----SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEI 311
Query: 287 GLC--------------------------------LFRMMADKCQLTYSVMISGLAMHGQ 314
LF M + ++++ MI+G A +G+
Sbjct: 312 ARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGE 371
Query: 315 GKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
++ +F EM+ ++PD+V VLSAC H G + D ++ E I + +
Sbjct: 372 SAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVR-EKNIKLGISGF 430
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
++ + + G + +A + Q+M + DVV + +L+S
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLISG 467
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 308/527 (58%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F ++ E +NT+I G V ++ EA L+ M++ + + F +
Sbjct: 180 GMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMI 239
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+A A L + G Q+H K G D+FV +LI+MY KC +E A +F QM +K+
Sbjct: 240 RASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTV 299
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
W++IIA +A +G E L ++ EM + + + ++ C L +L+ K H
Sbjct: 300 GWNSIIAGYALHGYSEEALSMYYEMRDSGV-KIDNFTFSIIIRICARLASLEHAKQAHAG 358
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L+R+ L+++ T+L+D+Y K G +E +F MM K ++++ +I+G HG+G EA
Sbjct: 359 LVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEA 418
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F ML EG+ P+ V ++ VLSACS++GL + G F+ M +++I P HY C+++
Sbjct: 419 VEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIE 478
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GR G+L EA LI+ P + +W +LL+A +VH N E+G+ AA+ L+ + S+
Sbjct: 479 LLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSN 538
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YV+L N+Y + R + A + + +GL P S +E+ ++ Y F+S D+ H I
Sbjct: 539 YVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEI 598
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y+ + ++ ++ GY P +L DVDE E+R L HS+KLAIAF LI+ S +P++I
Sbjct: 599 YQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLY-HSEKLAIAFGLINTSDWTPLQI 657
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++ R+C DCH+ KLI+++ REI+VRD RFH FKDG+CSC DYW
Sbjct: 658 VQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 34/320 (10%)
Query: 112 FEEALFLYNEMFERGV-EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ EAL L+ + G + D+ T+ AL AC L++++ ++ ++ G + D +++N
Sbjct: 111 YHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRN 170
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
++ M+ KC + A +F +M +K++ SW+ II G + E +LF M W+
Sbjct: 171 RVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM-----WQ 225
Query: 231 ----PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+ V+++ A LG + G+ H ++ +V V +LIDMY KCG +E
Sbjct: 226 XFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIED 285
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC-- 344
C+F M +K + ++ +I+G A+HG +EALS++ EM G++ D+ + ++ C
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345
Query: 345 ---------SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+HAGLV G IV +VDL + G + +A +
Sbjct: 346 LASLEHAKQAHAGLVRHG--------FGLDIVANT----ALVDLYSKWGRIEDAKHVFDM 393
Query: 396 MPIQQNDVVWRSLLSASKVH 415
MP +N + W +L++ H
Sbjct: 394 MP-HKNVISWNALIAGYGNH 412
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 334/594 (56%), Gaps = 18/594 (3%)
Query: 25 LNLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
L ++ + +TIL C + +++ + +H+ + GF + +N V T G++
Sbjct: 154 LGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGF-ESELLVANAVMT-MYGRCGAV 211
Query: 82 DYACSIFRQIDEP--GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ A +F +DE +N ++ +V ++A+ LY M R PD T+ +L
Sbjct: 212 EEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLR---PDKVTYVSLLS 268
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
AC+ + + G +H + E ++ V N+L++MY KC A A+F +M+Q+S+ S
Sbjct: 269 ACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIIS 328
Query: 200 WSAIIAAHASNGLWSECLKLFGEM------NNEKCWRPEESILVSVLSACTHLGALDLGK 253
W+ II+A+ L +E LF +M + + +P+ V++L+AC + AL+ GK
Sbjct: 329 WTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGK 388
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-YSVMISGLAMH 312
+ + V T+++++Y KCG +E+ +F + + + ++ MI+ A
Sbjct: 389 MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQF 448
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR-IVPTVQ 371
GQ EAL +F M EG+ PD +V +L ACSH GL ++G F M EYR + T+Q
Sbjct: 449 GQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQ 508
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
H+GCV DL+GR G L EA E ++ +P++ + V W SLL+A + H +L+ + A L ++
Sbjct: 509 HFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 568
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
+ YV LSN+YA Q+W+ VAK+R MA +G+ + G S +E+ + ++ F + D +
Sbjct: 569 EPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDA 628
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
HP I E + ++ Q+K GY PD VL VDE EK L HS++LAIA LI
Sbjct: 629 HPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTP 688
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+P+R+ +NLR+C+DCHT TKLIS I R+I+VRD RFH FKDG CSC+DYW
Sbjct: 689 LGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 218/476 (45%), Gaps = 43/476 (9%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
+H S A + F +++ + + L+ F + +E L M + GV PD TF
Sbjct: 3 AHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFI 62
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ- 194
+C ++L++G++IH V E D V N+L+NMY KC + A +F +M++
Sbjct: 63 TALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERT 122
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
++V SWS + AHA +G E L+ F M + +S +V++LSAC+ + G+
Sbjct: 123 RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGI-KATKSAMVTILSACSSPALVQDGRM 181
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMH 312
H + + ++V +++ MY +CG +E+ +F M + + +++++M+S +
Sbjct: 182 IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHN 241
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM---KLEYRIVPT 369
+GK+A+ ++ M L PD V YV +LSACS A V G + ++ +LE ++
Sbjct: 242 DRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG 298
Query: 370 VQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS--------ASKVHHNLEIG 421
+V + + G EA + M Q++ + W +++S A H ++
Sbjct: 299 ----NALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEACHLFQQML 353
Query: 422 EIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL--NQSPGFSLV--- 476
E+ Q +V + N A + + AS GL +++ G ++V
Sbjct: 354 ELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLY 413
Query: 477 ------EVARKVYKFVSQDRSHPAWDNIYEMIHQ---------MEWQLKFEGYSPD 517
E AR+++ V W+ + + Q + W+++ EG PD
Sbjct: 414 GKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 469
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 9/247 (3%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY C+ A A F ++Q+++ SW+ ++AA A +G E L+ M + RP+
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGV-RPDAV 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RM 293
++ L +C +L G H ++ + ++ V +L++MY KCG L +F +M
Sbjct: 60 TFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ +++S+M A+HG EAL F ML G++ V +LSACS LV +G
Sbjct: 120 ERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG 179
Query: 354 LL---CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+ C E ++ V+ + GR G + EA ++ +M DVV +++
Sbjct: 180 RMIHSCIALSGFESELLVA----NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML 235
Query: 411 ASKVHHN 417
++ VH++
Sbjct: 236 STYVHND 242
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY C F + + +++ +++ A+ GQ KE L M ++G+ PD V
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
++ L +C + +G+ +M ++ R+ + ++++ + G L A + M
Sbjct: 61 FITALGSCGDPESLRDGIR-IHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKM 119
Query: 397 PIQQNDVVWRSLLSASKVHHNL 418
+N + W + A +H N+
Sbjct: 120 ERTRNVISWSIMAGAHALHGNV 141
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/582 (37%), Positives = 331/582 (56%), Gaps = 41/582 (7%)
Query: 60 FWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEA 115
+N A N++ ++ + G ++ A F ++ E +N + + ++ +EA
Sbjct: 183 LFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEA 242
Query: 116 LFLYNEMFERGVEPDNFTFPALFKACAK-------------------------------L 144
L L+++M E G+ PD+ T+ +C+ +
Sbjct: 243 LNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDM 302
Query: 145 QALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
A ++I ++F ++G + + N +I+ Y + K+ A +F M ++ V SW+++
Sbjct: 303 HAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSM 362
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
IA +A NG + ++LF EM + +P+E + SVLSAC H+GAL L +
Sbjct: 363 IAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKN 422
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
L + SLI MY KCG + +F+ M + ++++ +ISG A +G GKEA+ +
Sbjct: 423 IKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVL 482
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M EG+EPD V Y+GVL+ACSHAGL+NEG F ++ PTV HY C+VDL+GRA
Sbjct: 483 TMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRA 537
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L EA LIQSMP++ + V+ SLL+AS++H + +GE+AA LF++ + +YVLLS
Sbjct: 538 GELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLS 597
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+YA RW DV ++R M GL +S G S VE +V+KF DRSH +IY+++
Sbjct: 598 NIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLA 657
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E ++K G+ D S LRDV+E+EK E L HS+KLAI FAL+ G+ IR+ +NLR
Sbjct: 658 ELERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLR 717
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT K+IS + REI+VRD RFH F +G CSC DYW
Sbjct: 718 ICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 51/381 (13%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
E + + N+ + ++ H H++ + + S L+ C H Y SIF
Sbjct: 3 ELVALASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLH-AHPAYVDSIFTSSP 61
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
P A ++ +++ + + + + L+ + P F + L K A K G
Sbjct: 62 SPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKL-----AGKSGNM 116
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H +V K+G D F++N++++MY K +V+ A +F+QM ++++A W+++I+ +G
Sbjct: 117 FHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGN 176
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+E + LF M A N+I T
Sbjct: 177 ETEAVVLFNMM----------------------------------------PARNIITWT 196
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
S++ Y K G LE F M ++ ++++ M S A KEAL++F +ML EG+ P
Sbjct: 197 SMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITP 256
Query: 333 DDVVYVGVLSACSHAG--LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
DD +V +S+CS G + + +L RM + IV ++D+ + G L A
Sbjct: 257 DDTTWVVTISSCSSIGDPTLADSIL---RMIDQKHIVLNSFVKTALLDMHAKFGNLEIAR 313
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
+ + Q+N V W ++SA
Sbjct: 314 NIFDELGSQRNAVTWNIMISA 334
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 171/399 (42%), Gaps = 87/399 (21%)
Query: 51 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEV 110
HA+VLK G + F + ++ A + G +D A ++F Q+ E D+N++I G K
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKN--GQVDLARNLFEQMAERTLADWNSMISGCWKSG 175
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
EA+ L+N M R ++
Sbjct: 176 NETEAVVLFNMMPAR---------------------------------------NIITWT 196
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
S++ Y K +E A F +M ++SV SW+A+ +A+A E L LF +M E
Sbjct: 197 SMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGI-T 255
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNIS----ALNVIVETSLIDMYVKCGCLEK 286
P+++ V +S+C+ +G L S++R I LN V+T+L+DM+ K G LE
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLAD----SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEI 311
Query: 287 GLC--------------------------------LFRMMADKCQLTYSVMISGLAMHGQ 314
LF M + ++++ MI+G A +G+
Sbjct: 312 ARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGE 371
Query: 315 GKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
++ +F EM+ ++PD+V VLSAC H G + D ++ E I + +
Sbjct: 372 SAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVR-EKNIKLGISGF 430
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
++ + + G + +A + Q+M + DVV + +L+S
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLISG 467
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 304/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F F + ++ G+ + EEA +++ M ++ + ++ A+
Sbjct: 307 GDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDK----NAVSWNAMM 362
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A + + ++E ++ F ++ N+++ Y + ++ A AIF M QK
Sbjct: 363 AAYVQRRMMEEAKEL----FDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAV 418
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++AA++ G E L+LF EM W S VLS C + AL+ G H
Sbjct: 419 SWAAMLAAYSQIGFSEETLQLFKEMGRCGEW-VNRSAFACVLSTCADIAALECGMQLHSR 477
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LI+ + V +L+ MY KCG +E+ F M ++ ++++ MI+G A HG GKEA
Sbjct: 478 LIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEA 537
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F M + +PDD+ VGVL+ACSH+GLV +G+ F M ++ + +HY C++D
Sbjct: 538 LEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMID 597
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA+ L++ MP + + +W +LL AS++H N E+G AA+ +F++ +
Sbjct: 598 LLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGM 657
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + +W DV K+R M +G+ + PGFS +EV KV+ F D HP ++I
Sbjct: 658 YVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDI 717
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++K GY VL DV+E+EK LK HS+KLA+A+ ++ + G PIR+
Sbjct: 718 YAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRV 777
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCHT K IS I R II+RD RFH F+DG+CSC DYW
Sbjct: 778 IKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 162/430 (37%), Gaps = 80/430 (18%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM---------------- 122
G + A S FR I P +F +NTL+ + L++EM
Sbjct: 152 GRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHA 211
Query: 123 -----------FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
F+ E D ++ + A + ++E ++ F E D N+
Sbjct: 212 NHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEAREL----FDSRTEWDAISWNA 267
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF--GEMNNEKCW 229
L+ Y + ++E A +F +M Q+ V SW+ +++ +A G +E +LF + + W
Sbjct: 268 LMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTW 327
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGS---------------------------LIRN 262
+++S G L+ K + L
Sbjct: 328 -------TAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDA 380
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ NV +++ Y + G L++ +F MM K ++++ M++ + G +E L +F
Sbjct: 381 MPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLF 440
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD---- 378
EM R G + + VLS C+ + G M+L R++ GC V
Sbjct: 441 KEMGRCGEWVNRSAFACVLSTCADIAALECG------MQLHSRLIKAGYGVGCFVGNALL 494
Query: 379 -LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
+ + G + EA + M ++ DVV + + A H + + + S P
Sbjct: 495 AMYFKCGSMEEAHSAFEEM--EERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPD 552
Query: 438 DYVLLSNMYA 447
D L+ + A
Sbjct: 553 DITLVGVLAA 562
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+ VI I +++ G + LF M + TY+ M++G A +G+ +ALS F +
Sbjct: 105 MEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI 164
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE--------------YRIVPTVQ 371
R PD Y +L A + + + FD M ++ + +V +
Sbjct: 165 PR----PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLAR 220
Query: 372 HY------------GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
HY ++ R G + EA EL S + + + W +L++ +E
Sbjct: 221 HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSR-TEWDAISWNALMAGYVQRSQIE 279
Query: 420 -----IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR-----TEMASKGLNQ 469
++ +++ N+ S Y +M A A+R +DVA IR T + S G Q
Sbjct: 280 EAQKMFNKMPQRDVVSWNT-MVSGYARRGDM-AEARRLFDVAPIRDVFTWTAIVS-GYAQ 336
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
+ ++E A++V+ + D++ +W+ +
Sbjct: 337 N---GMLEEAKRVFDAMP-DKNAVSWNAM 361
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 322/556 (57%), Gaps = 50/556 (8%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D A +F +++E + T++ G+V+ + E+L L+ +M V PD + A
Sbjct: 318 IDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSA 377
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C L+ G +H + G D F+ N+L+++Y KC K++ A F+Q+ KS ASW
Sbjct: 378 CVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASW 437
Query: 201 SAI-------------------------------IAAHASNGLWSECLKLFGEMNNEKCW 229
+++ + A+ + L++E ++F +M +
Sbjct: 438 NSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV- 496
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
+P+++ L+S+LS+C +GAL+ G + + +N ++ ++ T+LIDMY KCGC+E
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYE 556
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
+F + +K ++ M++ AM GQ EA+ ++ EM G++PD V ++ +L+ACSH GL
Sbjct: 557 IFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGL 616
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
V+EG F++++ Y I+PT+ HYGC+VDL+GR G L E ++ I+ MPI+ + +W SL+
Sbjct: 617 VDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLM 676
Query: 410 SASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQ 469
A + HHN+E+ E A K L +I+ + +VLLSN+YA A RW DV+K+RT++ G+ +
Sbjct: 677 RACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPK 736
Query: 470 SPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PGF+++E V++FV+ S+ +I M+ +E +L + Q L D
Sbjct: 737 QPGFTMIEQNGVVHEFVA---SNLVSADILCMLQDIERRLL-------VKQELSDTTSQ- 785
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
HS++LA+AF LI+ + SPIR+ ++RMC DCH+ KLIS Y+REI++RD
Sbjct: 786 -------HSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNY 838
Query: 590 RFHRFKDGTCSCRDYW 605
RFHRF DG CSC+DYW
Sbjct: 839 RFHRFTDGHCSCKDYW 854
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 243/529 (45%), Gaps = 73/529 (13%)
Query: 21 KGPELNLR-----LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL 75
K P LN + L+ + +LK+C N+ EF +HAH++ +P S ++A L
Sbjct: 20 KPPTLNPKTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLA--FL 77
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
++D A I EP + +NTL+ +KE +E L Y M +GV D TF
Sbjct: 78 LSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFH 137
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L AC K +K G ++HG + K GF + + N+L+ +Y KC K++ +F++M +
Sbjct: 138 FLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHR 197
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V SW+ +I+ + G++ E L LF EM P+E +VS++S C L L++GK
Sbjct: 198 DVISWNTMISCYVLKGMYREALDLFDEMLVSGVL-PDEITMVSLVSTCAKLKDLEMGKRL 256
Query: 256 H-----------GSLIRNI----------------------SALNVIVETSLIDMYVKCG 282
H GSL+ + S ++V++ T+L+ YVK
Sbjct: 257 HLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSN 316
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
++K LF M ++ ++++ M+SG G E+L +F +M E + PD+V V VLS
Sbjct: 317 KIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLS 376
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV---------DLMGRAGMLGEALELI 393
AC H L FD + + + T YG +V DL + G L EAL
Sbjct: 377 ACVH-------LEDFDLGRSVHAFIVT---YGMLVDGFLGNALLDLYAKCGKLDEALRTF 426
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF-QINSHHPSDYVLLSNMYARAQRW 452
+ +P ++ W S+L ++ A++ F +I + + N Y + +
Sbjct: 427 EQLPC-KSAASWNSMLDGFCRSGGVD----KARDFFNKIPEKDIVSWNTMVNAYVKHDLF 481
Query: 453 YDVAKIRTEMASKGL--NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
+ +I +M S + +++ SL+ KV +H W N+Y
Sbjct: 482 NESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGAL-----NHGIWVNVY 525
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 201/438 (45%), Gaps = 73/438 (16%)
Query: 41 CKNLEE--FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD 98
CKN + +VH +LK GF N +NL+ S G + C +F ++
Sbjct: 144 CKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGL--YSKCGKLKEVCQLFEKMTHRDVIS 201
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+NT+I +V + + EAL L++EM GV PD T +L CAKL+ L+ G ++H ++
Sbjct: 202 WNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIV 261
Query: 159 KVGFECDLFVQNSLINMYGKC---------------------------------EKVEFA 185
+ N L++MY KC K++ A
Sbjct: 262 DNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKA 321
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F +M+++S+ SW+ +++ + G + E L+LF +M E P+E LV+VLSAC H
Sbjct: 322 RQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVI-PDEVALVTVLSACVH 380
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK------------------- 286
L DLG+ H ++ ++ + +L+D+Y KCG L++
Sbjct: 381 LEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSM 440
Query: 287 --GLC----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
G C F + +K ++++ M++ H E+ IF +M ++PD
Sbjct: 441 LDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDK 500
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG-CVVDLMGRAGMLGEALELI 393
+ +LS+C+ G +N G+ + + +E + G ++D+ G+ G + A E+
Sbjct: 501 TTLISLLSSCAKVGALNHGI--WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIF 558
Query: 394 QSMPIQQNDVVWRSLLSA 411
+ I++N VW ++++A
Sbjct: 559 TQI-IEKNVFVWTAMMAA 575
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 33/259 (12%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCAS---NLVATC------ 73
N+ E +T+L C +LE+F + VHA ++ +G + F + +L A C
Sbjct: 363 NVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEA 422
Query: 74 ----------ALSHWGSM----------DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
+ + W SM D A F +I E +NT++ +VK F
Sbjct: 423 LRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFN 482
Query: 114 EALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
E+ ++ +M V+PD T +L +CAK+ AL G+ ++ ++ K D + +LI
Sbjct: 483 ESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALI 542
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
+MYGKC VE A IF Q+ +K+V W+A++AA+A G E + L+ EM E+ +P+
Sbjct: 543 DMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEM-EERGVKPDH 601
Query: 234 SILVSVLSACTHLGALDLG 252
+++L+AC+H G +D G
Sbjct: 602 VTFIALLAACSHGGLVDEG 620
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/571 (36%), Positives = 315/571 (55%), Gaps = 7/571 (1%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
LT +L+ + V G+ + F S L+ S G+M+ A +F +
Sbjct: 114 LTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHL--YSRCGAMEEAIRVFDGMPRK 171
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
++T++ GFV EAL +Y+ M E GV D + +AC + G +H
Sbjct: 172 DRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVH 231
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G + + D+ SL++MY K ++ A +F+ M ++ +WSA+I+ A NG
Sbjct: 232 GRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAV 291
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L LF E+ + +P LVS L AC +G L LGK HG ++R + I+ T++
Sbjct: 292 EALDLFRELQADGL-QPCSWALVSALLACASVGFLKLGKSIHGFILRRLE-WQCILGTAV 349
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDD 334
+DMY KCG LE LF ++ + + ++ +I+ HG G +AL++F E+ G++PD
Sbjct: 350 LDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDH 409
Query: 335 VVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
+ +LSA SH+GLV EG FDRM E+ I P +HY C+VDL+ R+G++ EA +++
Sbjct: 410 ATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLA 469
Query: 395 SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYD 454
SM + +W LLS + LE+GE AK + ++ L+SN+YA A++W
Sbjct: 470 SMQTEPTIAIWVILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDK 529
Query: 455 VAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGY 514
V +IR M G + PG+SL+EV + FV +D+SHP I +M+ ++ +++ GY
Sbjct: 530 VREIRKLMKDSGSKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGY 589
Query: 515 SPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKL 574
P V D+DED+ L HS++LAIAF L++ S G+ + I +NLR+C DCH K
Sbjct: 590 VPRTEFVYHDLDEDQL---LSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKY 646
Query: 575 ISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS I +REI+VRD KRFH FKDG CSC DYW
Sbjct: 647 ISKIVDREIVVRDAKRFHHFKDGACSCGDYW 677
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 149/290 (51%), Gaps = 8/290 (2%)
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P++ TF ACA+L L + F G+ D+FV ++L+++Y +C +E A
Sbjct: 104 RPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAMEEAIR 163
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F M +K +WS ++A + G E L ++ M E +E ++V V+ AC G
Sbjct: 164 VFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRM-REHGVSDDEVVMVGVIQACMSTG 222
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+G HG L+R+ ++V+ TSL+ MY K G L+ +FRMM + +T+S +IS
Sbjct: 223 NARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALIS 282
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFDRMKLEYR 365
G A +G+ EAL +F E+ +GL+P V L AC+ G + G + F +LE++
Sbjct: 283 GFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRLEWQ 342
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+ V+D+ + G L A +L + ++ V+W ++++ H
Sbjct: 343 CILGT----AVLDMYSKCGSLESARKLFNKLS-SRDLVLWNAIIACCGTH 387
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 11/251 (4%)
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+ +++AH+ G L++F + + RP + L+AC LG LD +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRALPSSA--RPNSTTFTLTLTACARLGDLDAAESVRVRA 133
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
+V V ++L+ +Y +CG +E+ + +F M K ++ +S M++G G+ EAL
Sbjct: 134 FAAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEAL 193
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+++S M G+ D+VV VGV+ AC G G R+ L + + V +V +
Sbjct: 194 AMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRL-LRHCMRMDVVTTTSLVSM 252
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF---QINSHHP 436
+ G L A ++ + MP +NDV W +L+S + + A +LF Q + P
Sbjct: 253 YAKNGHLDVACQVFRMMP-YRNDVTWSALISGFAQNGR----AVEALDLFRELQADGLQP 307
Query: 437 SDYVLLSNMYA 447
+ L+S + A
Sbjct: 308 CSWALVSALLA 318
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 325/591 (54%), Gaps = 17/591 (2%)
Query: 27 LRLKEQECLTILKTC-----KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
L L + LK C ++E K +H +K G + + L+ T A G +
Sbjct: 138 LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA--KIGDL 195
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVK----EVEF-EEALFLYNEMFERGVEPDNFTFPA 136
+ A IF+ + +P +N +I GF++ EF EA++L+ EM RG++P FTF +
Sbjct: 196 EDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSS 255
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ KAC+ ++A + G QIH +FK + D F+ N+L+ +Y +E F +
Sbjct: 256 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 315
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+++I H NG + L LF E+ +P+E + +LSAC +L A+ G+ H
Sbjct: 316 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSG-RKPDEFTISIMLSACANLAAVKSGEQIH 374
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
I+ I++ S I MY KCG ++ F+ + +++SVMIS A HG K
Sbjct: 375 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 434
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+ +F M G+ P+ + ++GVL ACSH GLV EGL F+ MK ++ I P V+H C+
Sbjct: 435 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACI 494
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GRAG L EA I + + V+WRSLLSA +VH + G+ A+ + ++
Sbjct: 495 VDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAA 554
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLL N+Y A +IR M +G+ + PG S +EV V+ FV+ DRSHP
Sbjct: 555 ASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQ 614
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER--LKGHSQKLAIAFALIHLSQGS 554
IY + +M ++K Y + +++ D E + ++ + HS+KLA+ F +I L + +
Sbjct: 615 VIYVQLEEMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSA 672
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
P+R+ +NLR C CH KL S + REII+RD RFHRF+DG+CSC DYW
Sbjct: 673 PVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 723
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 144/282 (51%), Gaps = 8/282 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D+A +F DE + +N+LI G+V+ +E L L +M G+ +++ +
Sbjct: 90 GRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSAL 149
Query: 139 KACAK--LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
KAC +++ G +HG K+G + D+ V +L++ Y K +E A+ IFK M +
Sbjct: 150 KACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPN 209
Query: 197 VASWSAIIAAH-----ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
V ++A+IA ++ +E + LF EM + + +P E S+L AC+ + A +
Sbjct: 210 VVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS-RGMKPSEFTFSSILKACSTIEAFEC 268
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
GK H + + + + +L+++Y G +E GL F ++++ +I G
Sbjct: 269 GKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQ 328
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+GQ + L++F E+L G +PD+ +LSAC++ V G
Sbjct: 329 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSG 370
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 16/321 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N+LI G+ + + E + L+ E + D FTF C + L+ G IH +
Sbjct: 9 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
G + + NSLI+MY KC ++++A +F+ D+ SW+++IA + G E L+
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 219 LFGEMNNEKCWRPEESILVSVLSAC--THLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L +M L S L AC +++ GK HG ++ L+V+V T+L+D
Sbjct: 129 LLVKMLRHGL-NLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLD 187
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISG-LAMHGQ----GKEALSIFSEMLREGLE 331
Y K G LE +F++M D + Y+ MI+G L M EA+ +F EM G++
Sbjct: 188 TYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMK 247
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMK---LEYRIVPTVQHYGCVVDLMGRAGMLGE 388
P + + +L ACS E C ++ +Y + +V+L +G + +
Sbjct: 248 PSEFTFSSILKACSTI----EAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIED 303
Query: 389 ALELIQSMPIQQNDVVWRSLL 409
L+ S P + + V W SL+
Sbjct: 304 GLKCFHSTP-KLDVVSWTSLI 323
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/559 (37%), Positives = 304/559 (54%), Gaps = 41/559 (7%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+K+H K G F + LV+ G + A + ++ +N+L+ G+
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSM--YGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ F++AL + EM + D T +L A
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPA--------------------------- 250
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N+ E V + +F +M +KS+ SW+ +I + N + E ++L+ M +
Sbjct: 251 VSNT------TTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG 304
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ P+ + SVL AC AL LGK HG + R N+++E +LIDMY KCGCLEK
Sbjct: 305 -FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F M + ++++ MIS G+G +A+++FS++ GL PD + +V L+ACSHA
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GL+ EG CF M Y+I P ++H C+VDL+GRAG + EA IQ M ++ N+ VW +
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL A +VH + +IG +AA LFQ+ YVLLSN+YA+A RW +V IR M SKGL
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S VEV R ++ F+ DRSHP D IY + + ++K GY PD L DV+E
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQ-----GSPIRIARNLRMCNDCHTYTKLISVIYERE 582
++K L HS+KLAI FAL++ + + IRI +NLR+C DCH KLIS I RE
Sbjct: 604 EDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSRE 663
Query: 583 IIVRDRKRFHRFKDGTCSC 601
II+RD RFH F+ G CSC
Sbjct: 664 IIIRDTNRFHVFRFGVCSC 682
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 49/397 (12%)
Query: 23 PELNLRLKE-QECL----TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSH 77
P+L L K QE + +L T ++ + VH+ ++ + C S+L ++
Sbjct: 29 PKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRII----LEDLRCNSSLGVKLMRAY 84
Query: 78 WGSMDYACS--IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
D A + +F +I E N +IR +V + E + ++ M V PD++TFP
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ KAC+ + G +IHG KVG LFV N L++MYGKC + A + +M ++
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V SW++++ +A N + + L++ EM + K + + S+L A
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISH-DAGTMASLLPA------------- 250
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
+ N + NV MYVK +F M K ++++VMI +
Sbjct: 251 ----VSNTTTENV--------MYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
EA+ ++S M +G EPD V VL AC ++ G ++ + +++P +
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK-KLIPNLLLENA 349
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSA 411
++D+ + G L +A ++ ++M + DVV W +++SA
Sbjct: 350 LIDMYAKCGCLEKARDVFENM--KSRDVVSWTAMISA 384
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 178/409 (43%), Gaps = 66/409 (16%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
L+ C+ +E K H + ++L+ + + ++ Y +F ++ +
Sbjct: 226 LEVCREMESVKISH----------DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLV 275
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
+N +I ++K EA+ LY+ M G EPD + ++ AC AL G +IHG++
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
+ +L ++N+LI+MY KC +E A +F+ M + V SW+A+I+A+ +G + +
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF ++ + P+ V+ L+AC+H
Sbjct: 396 ALFSKLQDSGLV-PDSIAFVTTLAACSH-------------------------------- 422
Query: 278 YVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
G LE+G F++M D ++T + M+ L G+ KEA +M +EP
Sbjct: 423 ---AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM---SMEP 476
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ-HYGCVVDLMGRAGMLGEALE 391
++ V+ +L AC + GLL D++ +++ P +Y + ++ +AG E
Sbjct: 477 NERVWGALLGACRVHSDTDIGLLAADKL---FQLAPEQSGYYVLLSNIYAKAGRWEEVTN 533
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
+ +++ L + N+E+ I L SH SD +
Sbjct: 534 I--------RNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/571 (35%), Positives = 329/571 (57%), Gaps = 35/571 (6%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K +E +++H HVLK G + + ++L++
Sbjct: 97 LLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRD 156
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T + + S Y A +F +I +N +I G+ + ++EAL L+ +M +
Sbjct: 157 VVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 216
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC ++E
Sbjct: 217 TNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELET 276
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+ + K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 277 ACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACA 335
Query: 245 HLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F + K ++
Sbjct: 336 HLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 395
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ + IFS M + G+EPDD+ +VG+LSACSH+G+++ G F M
Sbjct: 396 NAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 455
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y++ P ++HYGC++DL+G +G+ EA E+I +M ++ + V+W SLL A K+H N+E+GE
Sbjct: 456 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGE 515
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW +VA R + KG+ + PG S +E+ V
Sbjct: 516 SFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVV 575
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 576 HEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 635
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
IAF LI G+ + I +NLR+C +CH K
Sbjct: 636 IAFGLISTKPGTKLTIVKNLRVCRNCHEAYK 666
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 184/342 (53%), Gaps = 33/342 (9%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALS-HWGSMDYACSIFRQIDEPGAFDFNTL 102
L+ + +HA ++K G + S L+ C LS H+ + YA S+F I EP +NT+
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
RG + AL LY M G+ P+++TFP L K+CAK +A KEG QIHGHV K+G
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 163 ECDLFVQNSLINMY---GKCEK----------------------------VEFASAIFKQ 191
+ DL+V SLI+MY G+ E +E A +F +
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDE 182
Query: 192 MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
+ K V SW+A+I+ +A G + E L+LF +M RP+ES +V+V+SAC G+++L
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV-RPDESTMVTVVSACAQSGSIEL 241
Query: 252 GKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
G+ H + + N+ + +LID+Y KCG LE LF + K ++++ +I G
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
KEAL +F EMLR G P+DV + +L AC+H G ++ G
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 343
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 151/342 (44%), Gaps = 59/342 (17%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N+R E +T++ C ++E ++VH+ + GF SNL AL S
Sbjct: 218 NVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGF------GSNLKIVNALIDLYSKC 271
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ AC +F + +NTLI G+ ++EAL L+ EM G P++ T ++
Sbjct: 272 GELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 331
Query: 139 KACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA L A+ G IH ++ K G ++ SLI+MY KC +E A +F + KS
Sbjct: 332 PACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 391
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
++SW+A+I A +G +F M P++ V +LSAC+H G LDLG+
Sbjct: 392 LSSWNAMIFGFAMHGRADASFDIFSRMRKNGI-EPDDITFVGLLSACSHSGMLDLGR--- 447
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAM 311
+FR M ++T Y MI L
Sbjct: 448 --------------------------------HIFRSMTQDYKMTPKLEHYGCMIDLLGH 475
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G KEA + + M +EPD V++ +L AC G V G
Sbjct: 476 SGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELG 514
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 337/620 (54%), Gaps = 55/620 (8%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++ T+L + + +HAH++ G +P + +A+ A S+ + YA + Q
Sbjct: 7 RDPTTLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSN--HLSYARLVLPQ- 63
Query: 92 DEPGAF-DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK----------- 139
P N IR + A + ++ + PD+++ L +
Sbjct: 64 -RPATLLAHNAFIRALARGPRPCLAFAAFRDL---PLPPDHYSLNFLVRAATALVASAAE 119
Query: 140 ---ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ----- 191
A++ A + + HG + G D VQ+ +++MY V + A F +
Sbjct: 120 EKHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPD 179
Query: 192 --------------------------MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
M Q+ +WSA+IA + G E L LF EM +
Sbjct: 180 VVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLS 239
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E+ LVSVL+AC +G LD GK H + +++ + T+L+DMY KCG +
Sbjct: 240 AGT-TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVV 298
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ +F MA++ T++ +SGLAM+G G E L +F M G++P+ V +V VL CS
Sbjct: 299 TAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCS 358
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
AGLV+EG CFD M +Y + P +HYGC+VDL GRAG L +A+ I MP++ ++ VW
Sbjct: 359 MAGLVDEGRACFDSMD-KYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVW 417
Query: 406 RSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASK 465
+LL+AS++H+++++G+ A L I S + + +V LSN+YA +Q W V+++R M +K
Sbjct: 418 GALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAK 477
Query: 466 GLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDV 525
G+ + PG+S +EV KV++F R HP ++ I M+ +M+ +L+ +GY+ + +VL D+
Sbjct: 478 GVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDI 537
Query: 526 DEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
+E+EK + HS+KLA+AF LI L + IRI +NLR+C DCH Y KL+S ++ REI++
Sbjct: 538 EEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVM 597
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RDR RFH FK G CSCRDYW
Sbjct: 598 RDRNRFHHFKGGECSCRDYW 617
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 6/182 (3%)
Query: 29 LKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+ E +++L C L+ K VH +V G + + LV S G++ A
Sbjct: 244 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDM--YSKCGAVVTAM 301
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F + E + + + + G E L L+ M G++P+ +F A+ + C+
Sbjct: 302 EVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAG 361
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAII 204
+ EG + K G + ++++YG+ +++ A + M + W A++
Sbjct: 362 LVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALL 421
Query: 205 AA 206
A
Sbjct: 422 NA 423
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/620 (34%), Positives = 337/620 (54%), Gaps = 55/620 (8%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++ T+L + + +HAH++ G +P + +A+ A S+ + YA + Q
Sbjct: 1212 RDPTTLLPSLAEASHLRALHAHLVVSGRLASPSHLAAFLASLASSN--HLSYARLVLPQ- 1268
Query: 92 DEPGAF-DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK----------- 139
P N IR + A + ++ + PD+++ L +
Sbjct: 1269 -RPATLLAHNAFIRALARGPRPCLAFAAFRDL---PLPPDHYSLNFLVRAATALVASAAE 1324
Query: 140 ---ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ----- 191
A++ A + + HG + G D VQ+ +++MY V + A F +
Sbjct: 1325 EKHVSAEVNARLQAVSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACPD 1384
Query: 192 --------------------------MDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
M Q+ +WSA+IA + G E L LF EM +
Sbjct: 1385 VVCVTAMVAALAAGGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLS 1444
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E+ LVSVL+AC +G LD GK H + +++ + T+L+DMY KCG +
Sbjct: 1445 AGT-TVGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVV 1503
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ +F MA++ T++ +SGLAM+G G E L +F M G++P+ V +V VL CS
Sbjct: 1504 TAMEVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCS 1563
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
AGLV+EG CFD M +Y + P +HYGC+VDL GRAG L +A+ I MP++ ++ VW
Sbjct: 1564 MAGLVDEGRACFDSMD-KYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVW 1622
Query: 406 RSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASK 465
+LL+AS++H+++++G+ A L I S + + +V LSN+YA +Q W V+++R M +K
Sbjct: 1623 GALLNASRIHNSVDLGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAK 1682
Query: 466 GLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDV 525
G+ + PG+S +EV KV++F R HP ++ I M+ +M+ +L+ +GY+ + +VL D+
Sbjct: 1683 GVKKVPGWSTIEVDGKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQGYTANTREVLFDI 1742
Query: 526 DEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIV 585
+E+EK + HS+KLA+AF LI L + IRI +NLR+C DCH Y KL+S ++ REI++
Sbjct: 1743 EEEEKEGAISLHSEKLALAFGLIVLPEDVEIRIVKNLRVCMDCHRYIKLVSKVFNREIVM 1802
Query: 586 RDRKRFHRFKDGTCSCRDYW 605
RDR RFH FK G CSCRDYW
Sbjct: 1803 RDRNRFHHFKGGECSCRDYW 1822
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 6/182 (3%)
Query: 29 LKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC 85
+ E +++L C L+ K VH +V G + + LV S G++ A
Sbjct: 1449 VGEATLVSVLTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDM--YSKCGAVVTAM 1506
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+F + E + + + + G E L L+ M G++P+ +F A+ + C+
Sbjct: 1507 EVFESMAERNVYTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAG 1566
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAII 204
+ EG + K G + ++++YG+ +++ A + M + W A++
Sbjct: 1567 LVDEGRACFDSMDKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALL 1626
Query: 205 AA 206
A
Sbjct: 1627 NA 1628
>gi|77548549|gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 624
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 300/508 (59%), Gaps = 15/508 (2%)
Query: 112 FEEALFLYNEMFERG-----VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
AL LY +F + P+ FT+P LF+A AL + CD
Sbjct: 118 LPSALSLYALLFLSSSSPPLLRPNAFTYPPLFRAAPPALALALATHSIKFLGAHAASCDR 177
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA---------SNGLWSECL 217
+ +L++++ +C ++ +F ++ + +W+A+++A+A ++ L
Sbjct: 178 VLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYARLRARDVACASSAADAIL 237
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
++F M + +P E LV+V+ AC LGA+ G H ++ A+N IV T+L++M
Sbjct: 238 EMFVRMLS-LAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALVEM 296
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y CG L+ +F +D+ Y+ M+ GLA+HG G+ ALS+F M EG+ D V
Sbjct: 297 YAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHGRAALSLFDRMHGEGVPVDGVTV 356
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
+ V+ AC+HAGLV+EGL FDRM++E+ I P+++HYGC+VD++ RAG L +A +LI MP
Sbjct: 357 LSVMCACAHAGLVDEGLDYFDRMEIEFGIEPSIEHYGCMVDMLSRAGRLNDAEKLIHGMP 416
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
I N ++RSL+ A +H LE+G+ L ++ ++VL+SN YA RW D K
Sbjct: 417 IVPNAAIYRSLIRACGIHGKLELGKKMIAELMRLEPDDSGNHVLISNFYATTNRWDDAKK 476
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
R EM S G+++SPG S V++ +++F+ D++HPA IY M+ +E +L G+
Sbjct: 477 ARKEMKSMGIDKSPGSSFVDINGVLHEFLVGDKTHPASKEIYAMVEDIETRLSECGHRSS 536
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
S L DV+E++K + L HS++LAIAFALI + G+PIRI +NLR+C DCH KL+S
Sbjct: 537 TSSALFDVEEEDKADALSYHSERLAIAFALIASNPGAPIRIIKNLRVCADCHESAKLVSR 596
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+Y REI++RDR RFH F+DG CSC D+W
Sbjct: 597 VYGREIVMRDRTRFHHFRDGVCSCGDFW 624
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 26/265 (9%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVK---------EVEFEEALFLYNEMFERGVEPDNFTFPAL 137
+F +I P +N L+ + + + L ++ M ++P+ T A+
Sbjct: 199 VFDRIANPDLPAWNALLSAYARLRARDVACASSAADAILEMFVRMLSLAIKPNEITLVAV 258
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
AC +L A+ G+ H + K + V +L+ MY C +++ A +F +
Sbjct: 259 IGACGELGAVSHGVWAHTYAVKRRLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDT 318
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV-SVLSACTHLGALDLGKCTH 256
++A++ A +G L LF M+ E P + + V SV+ AC H G +D G
Sbjct: 319 RCYNAMLHGLAVHGHGRAALSLFDRMHGEGV--PVDGVTVLSVMCACAHAGLVDEGLDYF 376
Query: 257 GSLIRNISALNVIVETS------LIDMYVKCGCLEKGLCLFRMMADKCQLT-YSVMISGL 309
+ + +E S ++DM + G L L M Y +I
Sbjct: 377 DRM-----EIEFGIEPSIEHYGCMVDMLSRAGRLNDAEKLIHGMPIVPNAAIYRSLIRAC 431
Query: 310 AMHGQGKEALSIFSEMLREGLEPDD 334
+HG+ + + +E++R LEPDD
Sbjct: 432 GIHGKLELGKKMIAELMR--LEPDD 454
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/527 (36%), Positives = 305/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + F + ++ G+V+ +EA ++EM E+ + ++ A+
Sbjct: 249 GGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMI 304
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ + M I +F+ ++ N++I YG+ + A F M Q+
Sbjct: 305 AGYVQTKK----MDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCV 360
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+AIIA +A +G + E L +F E+ + + LS C + AL+LGK HG
Sbjct: 361 SWAAIIAGYAQSGHYEEALNMFVEIKQDGE-SLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++ V +L+ MY KCG +++ F + +K ++++ M++G A HG G++A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L++F M G++PD++ VGVLSACSH GL++ G F M +Y ++PT +HY C++D
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +LI++MP Q W +LL AS++H N E+GE AA+ +F++ +
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 599
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW D K+R++M G+ + PG+S VEV K++ F D SHP + I
Sbjct: 600 YVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERI 659
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + +++ +++ EGY VL DV+E+EK LK HS+KLA+AF ++ + G PIR+
Sbjct: 660 YAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRV 719
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ K IS I R II+RD RFH F +G CSC DYW
Sbjct: 720 MKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 67/266 (25%)
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
+ GL++ G F M EY + PT +HY C++DL+GR L E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 406 RSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASK 465
+LL AS++H N E+GE AA+ F++ + ++K+R
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMR----DV 857
Query: 466 GLNQSPGFSLVEVARKVYK-----FVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQ 520
G+ + PG+S EV K++ F+S++R + + E LK + +
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENIGFLE--------ELDLKMREREEEKER 909
Query: 521 VLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI-ARNLRMCNDCHTYTKLISVIY 579
L+ + E+ LA A ++ + G P R+ + + +C DC + K +S I
Sbjct: 910 TLKYLSEN------------LAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIV 957
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
R I +RD HRF + CSC +YW
Sbjct: 958 GRLITLRDS---HRFNESICSCGEYW 980
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 147/356 (41%), Gaps = 68/356 (19%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G D A +F + + +N +I G+++ +F A L+++M ER
Sbjct: 63 GHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER------------- 109
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
DLF N ++ Y + ++ A +F M +K V
Sbjct: 110 --------------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTH 256
SW+++++ +A NG E ++F M PE++ + +L+A H G ++ C
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNM-------PEKNSISWNGLLAAYVHNGRIEEA-CL- 194
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
L + S ++I L+ +V+ L LF M + ++++ MISG A G
Sbjct: 195 --LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
+A +F E D + ++S G+++E FD M + + Y +
Sbjct: 253 QARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAM 303
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA-AKNLFQI 431
+ + + A EL +SMP +N W ++++ +IG+IA A+ F +
Sbjct: 304 IAGYVQTKKMDIARELFESMPC-RNISSWNTMITGYG-----QIGDIAQARKFFDM 353
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 161/389 (41%), Gaps = 59/389 (15%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F WN + V C L A +F + E +N+L+ G+ + +EA +
Sbjct: 112 FSWNVML-TGYVRNCRLGD------ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREV 164
Query: 119 YNEMFERGVEPDNFTFPALF------KACAKLQALKEGMQIHGHVFKVGF---------- 162
++ M E+ N A +AC ++ + I + GF
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDAR 224
Query: 163 -------ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
D N++I+ Y + + A +F + + V +W+A+++ + NG+ E
Sbjct: 225 WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDE 284
Query: 216 CLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTHGSL-IRNISALNVIVET 272
F EM PE++ + ++++ +D+ + S+ RNIS+ N
Sbjct: 285 AKTFFDEM-------PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN----- 332
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
++I Y + G + + F MM + ++++ +I+G A G +EAL++F E+ ++G
Sbjct: 333 TMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESL 392
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD-----LMGRAGMLG 387
+ + LS C+ + G ++ + V GC V + + G +
Sbjct: 393 NRATFGCALSTCADIAALELG------KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 388 EALELIQSMPIQQNDVV-WRSLLSASKVH 415
EA + + I++ DVV W ++L+ H
Sbjct: 447 EANDTFEG--IEEKDVVSWNTMLAGYARH 473
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/574 (35%), Positives = 325/574 (56%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK L F K VH +LK + +P L+ + G M A +F ++
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL--YTQLGDMSDAFKVFNEMP 309
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ ++ +I F + EA+ L+ M E V P+ FT ++ CA + G Q
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG V KVGF+ D++V N+LI++Y KCEK++ A +F ++ K+ SW+ +I + + G
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ +F E + E S L AC L ++DLG HG I+ +A V V
Sbjct: 430 GGKAFSMFREALRNQV-SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SLIDMY KCG ++ +F M +++ +ISG + HG G++AL I M +P
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ + ++GVLS CS+AGL+++G CF+ M ++ I P ++HY C+V L+GR+G L +A++L
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKL 608
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
I+ +P + + ++WR++LSAS +N E +A+ + +IN + YVL+SNMYA A++W
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQW 668
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+VA IR M G+ + PG S +E V+ F HP I M+ + +
Sbjct: 669 ANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRA 728
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL-SQGSPIRIARNLRMCNDCHTY 571
GY PD + VL D+D++EK +RL HS++LA+A+ L+ + S + I I +NLR+C+DCH+
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K+IS I +R++++RD RFH F G CSC D+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 174/367 (47%), Gaps = 7/367 (1%)
Query: 50 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKE 109
+H+ ++K G+ N F + L+ A S GS+D A ++F I + ++ +V+
Sbjct: 168 LHSPIVKLGYDSNAFVGAALIN--AYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 110 VEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ 169
FE++L L + M G P+N+TF KA L A +HG + K + D V
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
L+ +Y + + A +F +M + V WS +IA NG +E + LF M E
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REAFV 344
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC 289
P E L S+L+ C LG+ HG +++ L++ V +LID+Y KC ++ +
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 290 LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL 349
LF ++ K +++++ +I G G+G +A S+F E LR + +V + L AC+
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 350 VNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSL 408
++ G+ + ++ V ++D+ + G + A + M + DV W +L
Sbjct: 465 MDLGVQVHG-LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM--ETIDVASWNAL 521
Query: 409 LSASKVH 415
+S H
Sbjct: 522 ISGYSTH 528
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 135/298 (45%), Gaps = 7/298 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K +H +LK G + F A+N++ + D A ++F ++ E F TL +G+
Sbjct: 69 KAIHCDILKKGSCLDLF-ATNILLNAYVKAGFDKD-ALNLFDEMPERNNVSFVTLAQGYA 126
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ + LY+ + G E + F + K L + +H + K+G++ + F
Sbjct: 127 ----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +LIN Y C V+ A +F+ + K + W+ I++ + NG + + LKL M
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+ P + L A LGA D K HG +++ L+ V L+ +Y + G +
Sbjct: 243 -FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M + +S MI+ +G EA+ +F M + P++ +L+ C+
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 122/293 (41%), Gaps = 30/293 (10%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D+ + A+ + C + IH + K G DLF N L+N Y K + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 190 KQMDQKSVASWSAIIAAHASN---GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+M +++ S+ + +A GL+S + E+N + S L L
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELN--------PHVFTSFLKLFVSL 159
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
++ H +++ N V +LI+ Y CG ++ +F + K + ++ ++
Sbjct: 160 DKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIV 219
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD-------- 358
S +G +++L + S M G P++ + L A + GL FD
Sbjct: 220 SCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA-------SIGLGAFDFAKGVHGQ 272
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+K Y + P V ++ L + G + +A ++ MP +NDVV S + A
Sbjct: 273 ILKTCYVLDPRVGV--GLLQLYTQLGDMSDAFKVFNEMP--KNDVVPWSFMIA 321
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/591 (35%), Positives = 325/591 (54%), Gaps = 17/591 (2%)
Query: 27 LRLKEQECLTILKTC-----KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
L L + LK C ++E K +H +K G + + L+ T A G +
Sbjct: 217 LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA--KIGDL 274
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVK----EVEF-EEALFLYNEMFERGVEPDNFTFPA 136
+ A IF+ + +P +N +I GF++ EF EA++L+ EM RG++P FTF +
Sbjct: 275 EDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSS 334
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ KAC+ ++A + G QIH +FK + D F+ N+L+ +Y +E F +
Sbjct: 335 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 394
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+++I H NG + L LF E+ +P+E + +LSAC +L A+ G+ H
Sbjct: 395 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSG-RKPDEFTISIMLSACANLAAVKSGEQIH 453
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
I+ I++ S I MY KCG ++ F+ + +++SVMIS A HG K
Sbjct: 454 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 513
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+ +F M G+ P+ + ++GVL ACSH GLV EGL F+ MK ++ I P V+H C+
Sbjct: 514 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACI 573
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VDL+GRAG L EA I + + V+WRSLLSA +VH + G+ A+ + ++
Sbjct: 574 VDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAA 633
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+ YVLL N+Y A +IR M +G+ + PG S +EV V+ FV+ DRSHP
Sbjct: 634 ASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQ 693
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER--LKGHSQKLAIAFALIHLSQGS 554
IY + +M ++K Y + +++ D E + ++ + HS+KLA+ F +I L + +
Sbjct: 694 VIYVQLEEMLEEIKKLDYIDE--KLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSA 751
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
P+R+ +NLR C CH KL S + REII+RD RFHRF+DG+CSC DYW
Sbjct: 752 PVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDYW 802
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 186/410 (45%), Gaps = 26/410 (6%)
Query: 17 EEPPKGPE---LNLRLKEQECLTILKTCK----NLEEFKKVHAHVLKWGFFWNPFCASNL 69
+ PP P+ L L L + T L C +L K H H++K F F +NL
Sbjct: 2 QTPPHNPQPYYLGLPL-DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNL 60
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
+ G D A +F ++ + +N+LI G+ + + E + L+ E +
Sbjct: 61 LYM--YCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRL 118
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D FTF C + L+ G IH + G + + NSLI+MY KC ++++A +F
Sbjct: 119 DKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVF 178
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC--THLG 247
+ D+ SW+++IA + G E L+L +M L S L AC
Sbjct: 179 ESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHG-LNLNSYALGSALKACGSNFSS 237
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
+++ GK HG ++ L+V+V T+L+D Y K G LE +F++M D + Y+ MI+
Sbjct: 238 SIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIA 297
Query: 308 G-LAMHGQ----GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK- 361
G L M EA+ +F EM G++P + + +L ACS E C ++
Sbjct: 298 GFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTI----EAFECGKQIHA 353
Query: 362 --LEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
+Y + +V+L +G + + L+ S P + + V W SL+
Sbjct: 354 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLI 402
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/530 (37%), Positives = 301/530 (56%), Gaps = 4/530 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + +NT++ G ++ EAL +M GV N+T+ +F
Sbjct: 206 GDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVF 265
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ---MDQK 195
L + G Q+HG V E D FV SL++MY KC ++E A +IF + +
Sbjct: 266 ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTED 325
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+WS ++A + NG E L+ F M E + IL SV SAC + G ++ G+
Sbjct: 326 RQFAWSTMVAGYVQNGREEEALEFFRRMLREGV-PAGQFILTSVASACANAGMVEQGRQV 384
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG + + + + ++++DMY K G LE +FR K ++ M+ A HGQG
Sbjct: 385 HGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQG 444
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ AL IFS M E + P+++ V VLSACSH+GLV++G F+ M+ EY IVP +HY C
Sbjct: 445 RMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNC 504
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL GRAG+L +A I+ I VVW++LLSA ++H ++E ++A++ L Q+ +
Sbjct: 505 MVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYD 564
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVL+SNMYA +W D K+R+ M + + + PG S + + V++FV+ D SHP
Sbjct: 565 AGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPRS 624
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
IY + ++ +LK GY+ V+ D++E+++ LK HS+KLAIAF +I G+
Sbjct: 625 AEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGIISTPVGTA 684
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+RI +NLR+C DCH K I+ +REI+VRD RFH FKDG CSC D+W
Sbjct: 685 LRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 39/353 (11%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFER--GVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+ ++I G +E + + + EM + P+ F + + CA L ++ G +IHG
Sbjct: 92 WTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGW 151
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ + G D+ + N++++MY KC A F M QK SW+ +I A +G
Sbjct: 152 ILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGA 211
Query: 217 LKLFGE--MNNEKCWRPEESILVS----------------------------VLSACTHL 246
+LF E + + W S L+ V + L
Sbjct: 212 TQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLL 271
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD---KCQLTYS 303
+ DLG+ HG ++ + + V SL+DMY KCG +E L +F +D Q +S
Sbjct: 272 SSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWS 331
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KL 362
M++G +G+ +EAL F MLREG+ + V SAC++AG+V +G + KL
Sbjct: 332 TMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKL 391
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
+R + +VD+ ++G L +A + +S +N +W ++L + H
Sbjct: 392 GHRFDAPLA--SAIVDMYSKSGSLEDACRIFRSAQT-KNVALWTTMLCSYASH 441
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 45/266 (16%)
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE-KCWRPEESILVSVLSAC 243
A +F +S+ +W++II+ A G ++ ++ F EM +E P +L VL C
Sbjct: 77 AHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCC 136
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG--------------------- 282
LG ++ G+ HG ++R+ +V++ +++DMY KCG
Sbjct: 137 AGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196
Query: 283 -----CLEKG-LCLFRMMADKCQL----TYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
CL+ G L + D+ L +++ ++SGL HG EAL +M+R G+
Sbjct: 197 IVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTF 256
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV----QHYGC-VVDLMGRAGMLG 387
+ Y V + AGL++ L +L R+V V GC ++D+ + G +
Sbjct: 257 SNYTYSMVFAL---AGLLSSRDLG---RQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEME 310
Query: 388 EALELIQ--SMPIQQNDVVWRSLLSA 411
AL + S + W ++++
Sbjct: 311 SALSIFDRWSDFTEDRQFAWSTMVAG 336
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 318/585 (54%), Gaps = 66/585 (11%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
IF + + +NT+I GF AL ++ M + G++P +T ++ AC +L
Sbjct: 111 IFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLD 170
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L+ G QIHG + ++FV N+L ++Y +C +++ A +F +M ++V +W+ +I+
Sbjct: 171 LRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISG 230
Query: 207 HASNGLWSECLKLFGEMN-------------------------------------NEKCW 229
+ N +C+ LF EM +E CW
Sbjct: 231 YLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCW 290
Query: 230 ----------------------------RPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
RP+ + SV+S+C L +L G+ HG
Sbjct: 291 TIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFL 350
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+++V ++L+DMY KCG +F M + ++++ MI G A++GQ EALS+
Sbjct: 351 MGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSL 410
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
+ ML E L+PD V +VGVLSAC HAGLV EG F M ++ + PT HY C+V+L G
Sbjct: 411 YENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFG 470
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
R+G + +A++LI SM + N ++W ++LS + +++ GE+AA+ L ++N + Y++
Sbjct: 471 RSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIM 530
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSNMYA RW DVA IR+ M SK + + +S +E+ +V+KFV+ DR+HP I+
Sbjct: 531 LSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQ 590
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG-SPIRIAR 560
++++ +L+ G+SP+ + VL D EDEK E + HS+KLA+A+ LI G +PIRI +
Sbjct: 591 LNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIK 650
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
N+R C DCH + K +S I R +I+RD RFH F +G CSC+DYW
Sbjct: 651 NIRTCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 126/280 (45%), Gaps = 44/280 (15%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F +I E + +I G + + E+AL L++EM PD +T ++
Sbjct: 270 GYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVV 329
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+CAKL +L G +HG F +G DL V ++L++MY KC A IF M ++V
Sbjct: 330 SSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVV 389
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+++I +A NG E L L+ M E +P+ V VLSAC H
Sbjct: 390 SWNSMIGGYALNGQDLEALSLYENMLEEN-LKPDSVTFVGVLSACVH------------- 435
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHG 313
G +E+G F M+D+ L Y+ M++ G
Sbjct: 436 ----------------------AGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSG 473
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+A+ + S M + EP+ +++ VLS C G + G
Sbjct: 474 HMDKAVDLISSMSQ---EPNSLIWTTVLSVCVMKGDIKHG 510
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
F+A QA + +H H+FK D F+ N L+N+Y K ++ A +F +M Q+
Sbjct: 33 FRASDVDQAKRLKSHMHLHLFKPN---DTFIHNRLLNLYAKSGEISHARKLFDEMTQRDN 89
Query: 198 ASWSA-------------------------------IIAAHASNGLWSECLKLFGEMNNE 226
SW+A +I+ A NG L +F M E
Sbjct: 90 FSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKE 149
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+P E VSVL+ACT L L GK HG +I NV V +L D+Y +CG +++
Sbjct: 150 G-LKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQ 208
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
LF M + +T+++MISG + Q ++ + +F EM L+PD V VL A
Sbjct: 209 ARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQ 268
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
AG ++E F ++ + + T+ GC
Sbjct: 269 AGYIDEARKVFGEIREKDEVCWTIMIVGC 297
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+++ +Y K G +E +F M + ++Y+ +ISG A +G+G AL +F M +EGL+
Sbjct: 93 NAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P + +V VL+AC+ + G R+ + + V + DL R G + +A
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIII-CNLGGNVFVCNALTDLYARCGEIDQARR 211
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
L M I +N V W ++S
Sbjct: 212 LFDRMVI-RNVVTWNLMISG 230
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/602 (35%), Positives = 340/602 (56%), Gaps = 18/602 (2%)
Query: 11 LLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV 70
LLL Q + P L L +L L + + VHA+ ++ + LV
Sbjct: 218 LLLMQDDHAPNASTL------VALLPLLAQHGALSQGRAVHAYSVRACSLHD-HKDGVLV 270
Query: 71 ATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
T L + G + YA +F + ++ L+ GFV EA L+ +M +G+
Sbjct: 271 GTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGL 330
Query: 128 ---EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
P + + +ACA L L G Q+H + K G DL NSL++MY K ++
Sbjct: 331 CFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQ 388
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKC-WRPEESILVSVLSAC 243
A+ +F QM K S+SA+++ + NG E ++F +M + C +P+ + +VS++ AC
Sbjct: 389 ATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM--QACNVQPDVATMVSLIPAC 446
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
+HL AL GKC HGS+I A + +LIDMY KCG ++ +F +M + ++++
Sbjct: 447 SHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWN 506
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI+G +HG GKEA ++F +M + EPDDV ++ ++SACSH+GLV EG F M +
Sbjct: 507 TMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHK 566
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y I P ++HY +VDL+ R G L EA + IQ MP++ + VW +LL A +VH N+++G+
Sbjct: 567 YGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQ 626
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
+ + Q+ ++VLLSN+++ A R+ + A++R +G +SPG S +E+ ++
Sbjct: 627 VSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLH 686
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
F+ DRSH IY+ + + + GY D S VL+DV+E+EK + L HS+KLAI
Sbjct: 687 AFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAI 746
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF ++ LS+ I + +NLR+C DCHT K ++++ +R IIVRD RFH FK+G CSC D
Sbjct: 747 AFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGD 806
Query: 604 YW 605
+W
Sbjct: 807 FW 808
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 172/345 (49%), Gaps = 23/345 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F QI PG D+N LIR + + R +P+N+TFP +
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KAC+ L L+ +H H + G DLFV +L+++Y KC A+ +F++M + V
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+A++A +A +G +S+ + M ++ P S LV++L GAL G+ H
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDDHA--PNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 259 LIRNISALN----VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
+R S + V+V T+L+DMY KCG L +F MA + ++T+S ++ G + G+
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 315 GKEALSIFSEMLREG---LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
EA S+F +ML +G L P V L AC+ N LC + +L + +
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSV--ASALRACA-----NLSDLCLGK-QLHALLAKSGL 366
Query: 372 HY-----GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
H ++ + +AG++ +A L M + ++ V + +L+S
Sbjct: 367 HTDLTAGNSLLSMYAKAGLIDQATTLFDQM-VVKDTVSYSALVSG 410
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 295/506 (58%), Gaps = 5/506 (0%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I + + + E+A L+ + V P+ ++ ++ +AC + L G QIH H K+G
Sbjct: 316 MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIG 375
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
E DLFV N+L++ Y KC ++ + IF + + SW+ I+ + +GL E L +F
Sbjct: 376 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFC 435
Query: 222 EMNNEK--CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
EM + C + S SVL AC ++ H S+ ++ + ++ SLID Y
Sbjct: 436 EMQAAQMPCTQVTYS---SVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYA 492
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG + L +F+ + ++ ++++ +ISG A+HGQ +AL +F M + +E +D+ +V
Sbjct: 493 KCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVA 552
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+LS C GLVN GL FD M++++ I P+++HY C+V L+GRAG L +AL+ I +P
Sbjct: 553 LLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSA 612
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ +VWR+LLS+ +H N+ +G +A+ + +I + YVLLSNMYA A VA +R
Sbjct: 613 PSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLR 672
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M + G+ + PG S VE+ +++ F HP I M+ + + EGY PDI+
Sbjct: 673 KSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDIN 732
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
VL DVD+++K L HS++LA+A+ L+ G PIRI +NLR C DCHT +IS I
Sbjct: 733 VVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIV 792
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
+REIIVRD RFH F+DG CSC DYW
Sbjct: 793 KREIIVRDINRFHHFEDGKCSCGDYW 818
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 24/301 (7%)
Query: 48 KKVHAHVLKWGFF--WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
+ VH HV++ G + FCA+ L+ G + A +F ++ E F TL++
Sbjct: 79 RAVHGHVVRRGGVGRLDLFCANVLLNM--YGKLGPLASARRLFDRMPERNMVSFVTLVQA 136
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ +FE A L+ + G E + F + K + A +H +K+G + +
Sbjct: 137 HAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHN 196
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
FV + LI+ Y C V A +F + +K W+A+++ ++ N +C
Sbjct: 197 AFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN----DC--------P 244
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E +R +S + +S C G HG I+ ++ V +L+DMY KCG ++
Sbjct: 245 ENAFRCAQSCSLLAIS-CARQG-------IHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 296
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
F M+ + S MIS A Q ++A +F ++R + P++ VL AC+
Sbjct: 297 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 356
Query: 346 H 346
+
Sbjct: 357 N 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 18/215 (8%)
Query: 104 RGFVKEVEFEEAL-FLYNEMFERGVEP-----DNFTFPALFKACAKLQALKEGMQIHGHV 157
RGF + AL +L +E+ + P D+F + C + G +HGHV
Sbjct: 29 RGFAA---YAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHV 85
Query: 158 FKVG--FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ G DLF N L+NMYGK + A +F +M ++++ S+ ++ AHA G +
Sbjct: 86 VRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEA 145
Query: 216 CLKLFGEMNNEKCWRPEES---ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
LF + W E +L ++L + A L H + N V +
Sbjct: 146 AAALFRRLR----WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGS 201
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
LID Y C + +F + K + ++ M+S
Sbjct: 202 GLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/514 (37%), Positives = 303/514 (58%), Gaps = 3/514 (0%)
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
P +F F +L R + AL Y + + +F F ++ KACA L A++ GM I
Sbjct: 68 PDSFLFCSLTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAGMGI 127
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H H +G + FVQ SL+ +Y KC +++ A +F + KSV +W+A+I+ + NGL
Sbjct: 128 HAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQNGLA 187
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
++++ EM P+ + V+ LSAC GALDLG+ ++ +NV++ +
Sbjct: 188 GRAIEVYREMQMAG-EAPDSATFVATLSACAQAGALDLGRQVDKLIVSERMEMNVVLGAA 246
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L++MY +CG + K F M+ ++ +T++ MI+G MHG G EA+ +F+ M ++G P+
Sbjct: 247 LVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQGPPPN 306
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
DV +V VLSAC+HAGLV+EG F MK Y +VP V+HY +VD+ GRAG+L +A+ I
Sbjct: 307 DVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDAMRFI 366
Query: 394 Q-SMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
S+P + VW ++L A K+H + +G A+ L + PS VLLSN+YA + +
Sbjct: 367 HDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYALSGKM 426
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
V K+R M + L + G+SL+E+A + F ++SHP IY+ + ++ ++
Sbjct: 427 NHVEKVRDTMIKRRLKKPIGYSLIEIAGVAHLFRMGEKSHPKTSEIYQYLEKLIEKITDV 486
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQ-GSPIRIARNLRMCNDCHTY 571
GY P VL +++E+E+ L+ H +KLA+AF L+ S +PIRI +NLR+C DCH
Sbjct: 487 GYVPKTDSVLHELEEEEREFALRYHGEKLAVAFGLMMTSGCTTPIRIIKNLRICEDCHLA 546
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S + REIIVRD RFH FK G CSC++YW
Sbjct: 547 IKYMSAVENREIIVRDMHRFHHFKAGKCSCQEYW 580
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/527 (36%), Positives = 305/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F + F + ++ G+V+ +EA ++EM E+ + ++ A+
Sbjct: 249 GGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMI 304
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ + M I +F+ ++ N++I YG+ + A F M Q+
Sbjct: 305 AGYVQTKK----MDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCV 360
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+AIIA +A +G + E L +F E+ + + LS C + AL+LGK HG
Sbjct: 361 SWAAIIAGYAQSGHYEEALNMFVEIKQDGE-SLNRATFGCALSTCADIAALELGKQIHGQ 419
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++ V +L+ MY KCG +++ F + +K ++++ M++G A HG G++A
Sbjct: 420 AVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQA 479
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L++F M G++PD++ VGVLSACSH GL++ G F M +Y ++PT +HY C++D
Sbjct: 480 LTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMID 539
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +LI++MP Q W +LL AS++H N E+GE AA+ +F++ +
Sbjct: 540 LLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGM 599
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW D K+R++M G+ + PG+S VEV K++ F D SHP + I
Sbjct: 600 YVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERI 659
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + +++ +++ EGY VL DV+E+EK LK HS+KLA+AF ++ + G PIR+
Sbjct: 660 YAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRV 719
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH+ K IS I R II+RD RFH F +G CSC DYW
Sbjct: 720 MKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 147/356 (41%), Gaps = 68/356 (19%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G D A +F + + +N +I G+++ +F A L+++M ER
Sbjct: 63 GHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER------------- 109
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
DLF N ++ Y + ++ A +F M +K V
Sbjct: 110 --------------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTH 256
SW+++++ +A NG E ++F M PE++ + +L+A H G ++ C
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNM-------PEKNSISWNGLLAAYVHNGRIEEA-CL- 194
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
L + S ++I L+ +V+ L LF M + ++++ MISG A G
Sbjct: 195 --LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLS 252
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
+A +F E D + ++S G+++E FD M + + Y +
Sbjct: 253 QARRLFDESPTR----DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAM 303
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA-AKNLFQI 431
+ + + A EL +SMP +N W ++++ +IG+IA A+ F +
Sbjct: 304 IAGYVQTKKMDIARELFESMPC-RNISSWNTMITGYG-----QIGDIAQARKFFDM 353
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 161/389 (41%), Gaps = 59/389 (15%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F WN + V C L A +F + E +N+L+ G+ + +EA +
Sbjct: 112 FSWNVML-TGYVRNCRLGD------ARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREV 164
Query: 119 YNEMFERGVEPDNFTFPALF------KACAKLQALKEGMQIHGHVFKVGF---------- 162
++ M E+ N A +AC ++ + I + GF
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDAR 224
Query: 163 -------ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
D N++I+ Y + + A +F + + V +W+A+++ + NG+ E
Sbjct: 225 WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDE 284
Query: 216 CLKLFGEMNNEKCWRPEESILV--SVLSACTHLGALDLGKCTHGSL-IRNISALNVIVET 272
F EM PE++ + ++++ +D+ + S+ RNIS+ N
Sbjct: 285 AKTFFDEM-------PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN----- 332
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
++I Y + G + + F MM + ++++ +I+G A G +EAL++F E+ ++G
Sbjct: 333 TMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESL 392
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD-----LMGRAGMLG 387
+ + LS C+ + G ++ + V GC V + + G +
Sbjct: 393 NRATFGCALSTCADIAALELG------KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSID 446
Query: 388 EALELIQSMPIQQNDVV-WRSLLSASKVH 415
EA + + I++ DVV W ++L+ H
Sbjct: 447 EANDTFEG--IEEKDVVSWNTMLAGYARH 473
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/482 (40%), Positives = 287/482 (59%), Gaps = 5/482 (1%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
+ P + +L ++C +A+K G Q+H V GF D + L+N+Y C+ + A
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 187 AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+F ++ + ++ W+ +I +A NG + ++L+ +M + P+ VL AC L
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGL-VPDNFTFPFVLKACAAL 189
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADKCQL--TYS 303
A++ G+ H +++ +V V +LIDMY KCGC+ +F +++ L +++
Sbjct: 190 SAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWN 249
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
MI+G AMHG EAL +F EM R +PD + +VGVLSACSH GL+ EG + F+ M +
Sbjct: 250 AMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRD 308
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEI 423
Y+I PTVQHY C+VDL+G +G L EA LI M + + VW +LL++ K+H N+E+GEI
Sbjct: 309 YKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEI 368
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
A + L ++ +YV+LSN+YA+A +W VAK+R M + L +S S +EV KV+
Sbjct: 369 ALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVH 428
Query: 484 KFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
F+S D SHP D IY + ++ +K GYSP V DV++DEK + HS++LAI
Sbjct: 429 AFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAI 488
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
AF LI G+ + I +NLR+C DCH K IS I EREI VRD R+H FKDG CSC D
Sbjct: 489 AFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGD 548
Query: 604 YW 605
YW
Sbjct: 549 YW 550
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 172/328 (52%), Gaps = 22/328 (6%)
Query: 31 EQECLT--------ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG 79
E CLT +L++C K ++ K++HA V GF ++ A+ LV +
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVC--D 124
Query: 80 SMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
S+ A +F +I + F +N LIRG+ +E A+ LY +MF+ G+ PDNFTFP + K
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM---DQKS 196
ACA L A++ G +IH HV + G+E D+FV +LI+MY KC V A +F ++ D
Sbjct: 185 ACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL 244
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V SW+A+I +A +G +E L LF EMN + +P+ V VLSAC+H G L+ G
Sbjct: 245 VVSWNAMITGYAMHGHATEALDLFEEMN--RVAKPDHITFVGVLSACSHGGLLEEGWMFF 302
Query: 257 GSLIRNISALNVIVE-TSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQ 314
++IR+ + T ++D+ G L++ L +M + +++ +H
Sbjct: 303 ETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHAN 362
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLS 342
E I E L E LEPDD +LS
Sbjct: 363 -VELGEIALERLIE-LEPDDAGNYVILS 388
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 86/195 (44%), Gaps = 13/195 (6%)
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
C P S S+L +C A+ GK H + + ++ T L+++Y C L
Sbjct: 70 CLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSA 129
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
LF + ++V+I G A +G + A+ ++ +M GL PD+ + VL AC+
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAAL 189
Query: 348 GLVNEGLLCFDRMKLEYRIVPT-----VQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
+ G ++ +V T V ++D+ + G +G A E+ + ++
Sbjct: 190 SAIEHG------REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAV 243
Query: 403 VV--WRSLLSASKVH 415
+V W ++++ +H
Sbjct: 244 LVVSWNAMITGYAMH 258
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/564 (35%), Positives = 314/564 (55%), Gaps = 4/564 (0%)
Query: 42 KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
++L + +++HAH++K G P L+ + + + + +F + + + +++
Sbjct: 68 RSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLL--SSQVFEESERKSSTTWSS 125
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
+I F + E A+ + M + PD+ FP+ KACA L G +H V K G
Sbjct: 126 VISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTG 185
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
++ D+FV +SL++MY KC ++ A +F +M ++V SWS +I + G E ++LF
Sbjct: 186 YDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFK 245
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
E E + L SV+ C L+LGK HG + L+ V +SLI +Y KC
Sbjct: 246 EALLEG-LDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKC 304
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G +E +F + K ++ M+ A H KEA +F++M G+ P+ + ++ VL
Sbjct: 305 GLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVL 364
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
ACSHAGLV EG F MK +Y I P QHY +VDL+GRAG L EAL +I+ MP +
Sbjct: 365 YACSHAGLVEEGKKYFALMK-KYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPT 423
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+ VW + ++ ++H N ++ AA +F++ + +V+LSN YA A R+ D AK R
Sbjct: 424 ESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
+ +G+ + G S +E +V+KF + DR H IY+ + + +++ GY D S V
Sbjct: 484 LRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFV 543
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
LR+V +EK + ++ HS++LAIAF LI + G PIRI +NLR+C DCH K IS + R
Sbjct: 544 LREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGR 603
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFHRF+DG CSC DYW
Sbjct: 604 VIIVRDNNRFHRFEDGKCSCADYW 627
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 301/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F F + ++ G+ + EEA +++ M ER + ++ A+
Sbjct: 238 GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMV 293
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A + + + E ++ F + ++ N+++ Y + +E A A+F M QK
Sbjct: 294 AAYIQRRMMDEAKEL----FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 349
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++AA++ G E L+LF EM W S VLS C + AL+ G HG
Sbjct: 350 SWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LIR + V +L+ MY KCG +E F M ++ ++++ MI+G A HG GKEA
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L IF M +PDD+ VGVL+ACSH+GLV +G+ F M ++ + +HY C++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +L++ MP + + +W +LL AS++H N E+G AA+ +F++ +
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 588
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + +W D K+R M +G+ + PGFS +EV KV+ F + D HP + I
Sbjct: 589 YVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKI 648
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++K GY VL DV+E+EK LK HS+KLA+A+ ++++ G PIR+
Sbjct: 649 YAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRV 708
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I R I++RD RFH F+ G+CSC DYW
Sbjct: 709 IKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 58/333 (17%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A S+FR I P + +NTL+ +A L++EM R D+ T+ +
Sbjct: 83 GRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMI 138
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ A + + H F + E D N ++ Y + +VE A +F +
Sbjct: 139 SSHANHGLV----SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAI 194
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+++ + G SE +LF M
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPG--------------------------------- 221
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
R++ + N++V Y + G + + LF + T++ ++SG A +G +EA
Sbjct: 222 --RDVVSWNIMVSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEA 274
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+F M E + V + +++A +++E F+ M V + ++
Sbjct: 275 RRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLT 325
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+AGML EA + +MP Q++ V W ++L+A
Sbjct: 326 GYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|297736881|emb|CBI26082.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/604 (35%), Positives = 332/604 (54%), Gaps = 45/604 (7%)
Query: 7 LHQSLLLTQPEE-PPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFC 65
L+Q+L+ P + +L+ + + + L+ C ++ H +VLK GF + F
Sbjct: 5 LNQNLIFRVPSTCISRQNKLSHFHTKTQLIQRLQDCNDITSVSFSHTNVLKSGFLNDTFT 64
Query: 66 ASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER 125
++L+ + + A +F ++ EP F +L+ GF+K + AL ++ +M E
Sbjct: 65 TNHLINSYV--RIRRTNDASQLFEEMREPNVISFTSLMAGFIKVGRPKSALLIFCKMLES 122
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
V P+ FTF + AC+ L L+ G +IH HV G +C+L V +SLI+MYGKC V+ A
Sbjct: 123 WVLPNAFTFATVVNACSMLADLRTGQKIHSHVEMFGVQCNLVVCSSLIDMYGKCNNVDDA 182
Query: 186 SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTH 245
+F MD ++V SW+++I A+ N L L+LF E N P +L SV++AC
Sbjct: 183 RRVFDGMDYRNVVSWTSMITAYGQNALGECALQLFREFNGLPLSSPNHFMLASVINACAS 242
Query: 246 LGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVM 305
LG L GK H ++IR N +V ++L+DMY KCGC+ +FR + D + Y+ M
Sbjct: 243 LGRLVSGKVAHAAVIRRGHESNDVVASALVDMYAKCGCIGYSDKVFRRIPDPSVIPYTSM 302
Query: 306 ISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR 365
I G A +G GK +L IF EML ++P+DV +VGVL ACSH+GLV++GL M ++
Sbjct: 303 IVGAAKYGLGKFSLDIFKEMLDRRIKPNDVTFVGVLHACSHSGLVDDGLEYLHSMHKKHG 362
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ--QNDVVWRSLLSASKVHHNLEIGEI 423
+VP +HY CVVD++GR G L EA +L +S+ ++ Q ++W +LLSAS+++ ++I
Sbjct: 363 VVPDTKHYTCVVDMLGRTGRLDEAHQLAKSIQVEPDQGALLWGTLLSASRLYGRVDIAVE 422
Query: 424 AAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVY 483
A+K L + N + Y+ S Y
Sbjct: 423 ASKWLIESNQQVAAAYIRDS--------------------------------------AY 444
Query: 484 KFVSQDRSHPA-WDNIYEMIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKL 541
F + D S A + ++ ++E ++K GY ++ DV+E+ K E + HS++L
Sbjct: 445 VFYAGDVSLCARGSEVASLLRELERRMKERGYVGGSRGLVSIDVEEEAKEEIVGLHSERL 504
Query: 542 AIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSC 601
A+AF LI + +G IR+ +NLRMC DCH KLIS I ER+ +VRD RFH F++G+C+C
Sbjct: 505 ALAFGLISIPKGVTIRVMKNLRMCRDCHEAFKLISEIVERDFVVRDVNRFHHFENGSCTC 564
Query: 602 RDYW 605
RD+W
Sbjct: 565 RDFW 568
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/538 (36%), Positives = 320/538 (59%), Gaps = 10/538 (1%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
N++ C L +G ++ A + F ++ +NTLI GF + + ++A L++ M E+
Sbjct: 140 NIMLVCYLRSYG-VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK-- 196
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+ ++ A+ + L+ +++ +V G + + V+ +++ Y K KVE A
Sbjct: 197 --NGVSWSAMISGYVEHGDLEAAEELYKNV---GMK-SVVVETAMLTGYMKFGKVELAER 250
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF++M K++ +W+++IA + N + LK+F M + RP L SVL C++L
Sbjct: 251 IFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRV-RPNPLSLSSVLLGCSNLS 309
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
AL LG+ H + ++ + + TSLI MY KCG L+ LF M K ++++ MIS
Sbjct: 310 ALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMIS 369
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
G A HG G++AL +F +M ++PD + +V V+ AC+HAG V+ G+ F MK E+ I
Sbjct: 370 GYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIE 429
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
HY CV+DL+GRAG L EA+ LI+ MP + + ++ +LL A ++H NL++ E AA+N
Sbjct: 430 AKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARN 489
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
L ++ + YV L+N+YA +W VAK+R M + + PG+S +E+ ++F S
Sbjct: 490 LLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRS 549
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
DR HP +I++ +++++ ++K GY PD+ L DV+E+ K + L HS+KLAIAF L
Sbjct: 550 SDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGL 609
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ + G+PIR+ +NLR+C DCH K IS I +REIIVRD RFH F++G CSC DYW
Sbjct: 610 MKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 28/322 (8%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
N I FV+ + E A ++ +M R N K K++ E +F
Sbjct: 76 LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHE-------LF 128
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
E D N ++ Y + VE A A F +M K +ASW+ +I+ A NG +
Sbjct: 129 DKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFD 188
Query: 219 LFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
LF M N W +++S G L+ + L +N+ +V+VET+++
Sbjct: 189 LFSVMPEKNGVSWS-------AMISGYVEHGDLEAAE----ELYKNVGMKSVVVETAMLT 237
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y+K G +E +F+ MA K +T++ MI+G + + ++ L +F M+ + P+ +
Sbjct: 238 GYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLS 297
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG---RAGMLGEALELI 393
VL CS+ + G +M P + L+ + G L A +L
Sbjct: 298 LSSVLLGCSNLSALPLG----RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF 353
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
MP +++ + W +++S H
Sbjct: 354 LEMP-RKDVISWNAMISGYAQH 374
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 329/590 (55%), Gaps = 34/590 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
KK+H H++K G ++NL+ G + A ++F Q+ + +++
Sbjct: 23 KKLHCHIIKTGIDQCKSLSNNLINM--YGKCGLIQDALNLFNQLPHRDPISWASILTANN 80
Query: 108 KEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ L ++ MF++ G++PD++ F L KACA L A+K+G Q+H D
Sbjct: 81 QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL-------------- 212
V++SL++MY KC + +F + K+ SW+A+I+ +A +G
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200
Query: 213 -----------------WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
W + LF EM ++ + IL S++ A +L L LGK
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H +I ++ V +L+DMY KC + +F M + ++++ +I G A HG
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EALS+++ ML GL+P++V +VG++ ACSH GLV++G F+ M +Y I P++QHY C
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC 380
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++DL+ R+G L EA LI++MP + ++ W +LLSA H N IG A +L +
Sbjct: 381 LLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPED 440
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
PS Y+LLSN+YA A W V+K+R MA+ + + PG+S + + ++ F++ + SHPA
Sbjct: 441 PSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAK 500
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+ I+ ++ +++ ++K GY PD S VL D+++ EK +L HS++LA+A+ L+ G
Sbjct: 501 EEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVAYGLLKGIPGMV 560
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ I +NLR+C DCHT K IS+I +REI+VRD R+H FKDG CSC ++W
Sbjct: 561 LHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNFW 610
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 107/188 (56%)
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
+ACA+ Q+ G ++H H+ K G + + N+LINMYGKC ++ A +F Q+ +
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHG 257
SW++I+ A+ L L +F M + +P+ + ++ AC LGA+ GK H
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ I + + + +V++SL+DMY KCG + G +F ++ K ++++ MISG A G+ +
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189
Query: 318 ALSIFSEM 325
A+ +F +M
Sbjct: 190 AIQLFQKM 197
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/538 (36%), Positives = 318/538 (59%), Gaps = 10/538 (1%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
N++ C L +G + A + F ++ +NTLI GF + + ++A L++ M E+
Sbjct: 140 NIMLVCYLRSYG-VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK-- 196
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
+ ++ A+ + L+ +++ +V G + + V+ +++ Y K KVE A
Sbjct: 197 --NGVSWSAMISGYVEHGDLEAAEELYKNV---GMK-SVVVETAMLTGYMKFGKVELAER 250
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
IF++M K++ +W+++IA + N + LK+F M + RP L SVL C++L
Sbjct: 251 IFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRV-RPNPLSLSSVLLGCSNLS 309
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
AL LG+ H + ++ + + TSLI MY KCG L+ LF M K +T++ MIS
Sbjct: 310 ALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMIS 369
Query: 308 GLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV 367
G A HG G++AL +F +M ++PD + +V V+ AC+HAG V+ G+ F MK E+ I
Sbjct: 370 GYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIE 429
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKN 427
HY CV+DL+GRAG L EA+ LI+ MP + ++ +LL A ++H NL++ E AA+N
Sbjct: 430 AKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARN 489
Query: 428 LFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVS 487
L ++ + YV L+N+YA +W VAK+R M + + PG+S +E+ ++F S
Sbjct: 490 LLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRS 549
Query: 488 QDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFAL 547
DR HP +I++ +++++ ++K GY PD+ L DV+E+ K + L HS+KLAIAF L
Sbjct: 550 SDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGL 609
Query: 548 IHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ + G+PIR+ +NLR+C DCH K IS I +REIIVRD RFH F++G CSC DYW
Sbjct: 610 MKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 28/322 (8%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
N I FV+ + E A ++ +M R N K K++ E +F
Sbjct: 76 LNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHE-------LF 128
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
E D N ++ Y + V+ A A F +M K +ASW+ +I+ A NG +
Sbjct: 129 DKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFD 188
Query: 219 LFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
LF M N W +++S G L+ + L +N+ +V+VET+++
Sbjct: 189 LFSVMPEKNGVSWS-------AMISGYVEHGDLEAAE----ELYKNVGMKSVVVETAMLT 237
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y+K G +E +F+ MA K +T++ MI+G + + ++ L +F M+ + P+ +
Sbjct: 238 GYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLS 297
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG---RAGMLGEALELI 393
VL CS+ + G +M P + L+ + G L A +L
Sbjct: 298 LSSVLLGCSNLSALPLG----RQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF 353
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
MP +++ + W +++S H
Sbjct: 354 LEMP-RKDVITWNAMISGYAQH 374
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 301/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F F + ++ G+ + EEA +++ M ER + ++ A+
Sbjct: 238 GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMV 293
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A + + + E ++ F + ++ N+++ Y + +E A A+F M QK
Sbjct: 294 AAYIQRRMMDEAKEL----FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 349
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++AA++ G E L+LF EM W S VLS C + AL+ G HG
Sbjct: 350 SWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADIAALECGMQLHGR 408
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LIR + V +L+ MY KCG +E F M ++ ++++ MI+G A HG GKEA
Sbjct: 409 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 468
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L IF M +PDD+ VGVL+ACSH+GLV +G+ F M ++ + +HY C++D
Sbjct: 469 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 528
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +L++ MP + + +W +LL AS++H N E+G AA+ +F++ +
Sbjct: 529 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 588
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + +W D K+R M +G+ + PGFS +EV KV+ F + D HP + I
Sbjct: 589 YVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKI 648
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++K GY VL DV+E+EK LK HS+KLA+A+ ++++ G PIR+
Sbjct: 649 YAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRV 708
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I R I++RD RFH F+ G+CSC DYW
Sbjct: 709 IKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 137/333 (41%), Gaps = 58/333 (17%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A S+FR I P + +NTL+ +A L++EM R D+ T+ +
Sbjct: 83 GRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMI 138
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ A + + H F + E D N ++ Y + +VE A +F + V
Sbjct: 139 SSHANHGLV----SLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI 194
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+++ + G SE +LF M
Sbjct: 195 SWNALMSGYVQWGKMSEARELFDRMPG--------------------------------- 221
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
R++ + N++V Y + G + + LF + T++ ++SG A +G +EA
Sbjct: 222 --RDVVSWNIMVSG-----YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEA 274
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+F M E + V + +++A +++E F+ M V + ++
Sbjct: 275 RRVFDAM----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-----NVASWNTMLT 325
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+AGML EA + +MP Q++ V W ++L+A
Sbjct: 326 GYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/580 (37%), Positives = 330/580 (56%), Gaps = 14/580 (2%)
Query: 36 TILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK C L +K +H LK GF ++LV S G ++ A +FR +
Sbjct: 475 TNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM--YSKCGRINEAEKVFRWMV 532
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE--PDNFTFPALFKACAKLQALKEG 150
+N +I G+V AL + M E ++ PD FT +L KAC+ + G
Sbjct: 533 GRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAG 592
Query: 151 MQIHGHVFKVGFEC--DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
QIHG + + GF C + SL+++Y KC + A F Q+ +K++ SWS++I +A
Sbjct: 593 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYA 652
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + E + LF + E + + +L S++ L GK +++ S L
Sbjct: 653 QEGDFVEAMGLFKRLQ-ELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET 711
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V SL+DMY+KCG +++ F M K ++++VMI+G HG GK+A+SIF++MLR
Sbjct: 712 SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRH 771
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
+EPD+V Y+ VLSACSH+G++ EG F ++ I P V+HY CVVDL+GRAG L E
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKE 831
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A L+ +MPI+ N +W++LLS +VH ++E+G+ K L +I+ +P++YV++SN+Y +
Sbjct: 832 AKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQ 891
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
A W + R + KGL + G S VE+ R+V+ F S + SHP I E + ++E +
Sbjct: 892 AGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQETLKEVERR 951
Query: 509 LKFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIH--LSQ-GSPIRIARNLRM 564
L+ E GY + L D+D++ K E L+ HS+KLAI AL L+Q G IR+ +NLR+
Sbjct: 952 LREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRV 1011
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDY 604
C DCH + K +S I + +VRD RFH F+DG CSC DY
Sbjct: 1012 CVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 200/425 (47%), Gaps = 48/425 (11%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F + E + L+ G V + +L L+ EM +G+ P+ FTF KAC
Sbjct: 423 AYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGL 482
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
L AL++G+QIHG K+GFE + V NSL++MY KC ++ A +F+ M +S+ SW+A+
Sbjct: 483 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAM 542
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
IA + G S L FG M K RP+E L S+L AC+ G + GK HG L+R+
Sbjct: 543 IAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 602
Query: 263 I--SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ + SL+D+YVKCG L F + +K +++S +I G A G EA+
Sbjct: 603 GFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMG 662
Query: 321 IFSE------------------------MLREGLEPDDVVY---VGVLSACSHA------ 347
+F +L++G + +V G+ ++ S++
Sbjct: 663 LFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYL 722
Query: 348 --GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM---PIQQND 402
GLV+E CF M+L+ I TV G G+ G+ +A+ + M I+ ++
Sbjct: 723 KCGLVDEAEKCFAEMQLKDVISWTVMITG-----YGKHGLGKKAVSIFNKMLRHNIEPDE 777
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP--SDYVLLSNMYARAQRWYDVAKIRT 460
V + ++LSA ++ GE L + P Y + ++ RA R + +
Sbjct: 778 VCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVD 837
Query: 461 EMASK 465
M K
Sbjct: 838 TMPIK 842
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 5/252 (1%)
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G +L N LI+MY KC + A +F M +++V SW+A+++ H NG + L LF
Sbjct: 399 GSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLF 458
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
EM + + P E + L AC L AL+ G HG ++ + V V SL+DMY K
Sbjct: 459 TEMGRQGIY-PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PDDVVYV 338
CG + + +FR M + ++++ MI+G G G AL+ F M ++ PD+
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 339 GVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
+L ACS G++ G + + + + G +VDL + G L A + +
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 398 IQQNDVVWRSLL 409
++ + W SL+
Sbjct: 638 -EKTMISWSSLI 648
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 334/594 (56%), Gaps = 18/594 (3%)
Query: 25 LNLRLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM 81
L ++ + +TIL C + +++ + +H+ + GF + +N V T G++
Sbjct: 241 LGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGF-ESELLVANAVMT-MYGRCGAV 298
Query: 82 DYACSIFRQIDEP--GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
+ A +F +DE +N ++ +V ++A+ LY M R D T+ +L
Sbjct: 299 EEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA---DKVTYVSLLS 355
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
AC+ + + G +H + E ++ V N+L++MY KC A A+F +M+Q+S+ S
Sbjct: 356 ACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIIS 415
Query: 200 WSAIIAAHASNGLWSECLKLFGEM------NNEKCWRPEESILVSVLSACTHLGALDLGK 253
W+ II+A+ L +E LF +M + + +P+ V++L+AC + AL+ GK
Sbjct: 416 WTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGK 475
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-YSVMISGLAMH 312
+ + V T+++++Y KCG +E+G +F + + + ++ MI+ A
Sbjct: 476 MVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQF 535
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR-IVPTVQ 371
GQ EAL +F M EG+ PD +V +L ACSH GL ++G F M EYR + T+Q
Sbjct: 536 GQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQ 595
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
H+GCV DL+GR G L EA E ++ +P++ + V W SLL+A + H +L+ + A L ++
Sbjct: 596 HFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRL 655
Query: 432 NSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRS 491
+ YV LSN+YA Q+W+ VAK+R MA +G+ + G S +E+ + ++ F + D +
Sbjct: 656 EPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDA 715
Query: 492 HPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLS 551
HP I E + ++ Q+K GY PD VL VDE EK L HS++LAIA LI
Sbjct: 716 HPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTP 775
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
G+P+R+ +NLR+C+DCHT TKLIS I R+I+VRD RFH FKDG CSC+DYW
Sbjct: 776 LGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 189/384 (49%), Gaps = 19/384 (4%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+L+ C + L E +K+H+ +K N + + +H S A + F +++
Sbjct: 49 LLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVS-MYAHCDSPGDAKAAFDALEQ 107
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ + L+ F + +E L M + GV PD TF +C ++L++G++I
Sbjct: 108 RNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRI 167
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWSAIIAAHASNGL 212
H V E D V N+L+NMY KC + A +F +M++ ++V SWS + AHA +G
Sbjct: 168 HQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGN 227
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L+ F M + +S +V++LSAC+ + G+ H + + ++V
Sbjct: 228 VWEALRHFRFMLLLGI-KATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVAN 286
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+++ MY +CG +E+ +F M + + +++++M+S + +GK+A+ ++ M L
Sbjct: 287 AVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QL 343
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRM---KLEYRIVPTVQHYGCVVDLMGRAGMLG 387
D V YV +LSACS A V G + ++ +LE ++ +V + + G
Sbjct: 344 RADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG----NALVSMYAKCGSHT 399
Query: 388 EALELIQSMPIQQNDVVWRSLLSA 411
EA + M Q++ + W +++SA
Sbjct: 400 EARAVFDKME-QRSIISWTTIISA 422
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 159/329 (48%), Gaps = 12/329 (3%)
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKC 179
++ ++ V +N T+ L + CA+ QAL EG +IH K +L + N +++MY C
Sbjct: 33 DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+ A A F ++Q+++ SW+ ++AA A +G E L+ M + RP+ ++
Sbjct: 93 DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGV-RPDAVTFITA 151
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF-RMMADKC 298
L +C +L G H ++ + ++ V +L++MY KCG L +F +M +
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 299 QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL--- 355
+++S+M A+HG EAL F ML G++ V +LSACS LV +G L
Sbjct: 212 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHS 271
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLSASKV 414
C E ++ V+ + GR G + EA ++ +M DVV W +LSA V
Sbjct: 272 CIALSGFESELLVA----NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAY-V 326
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
H++ I Q+ + + LLS
Sbjct: 327 HNDRGKDAIQLYQRMQLRADKVTYVSLLS 355
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 311/550 (56%), Gaps = 35/550 (6%)
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D A +F ++ E F +N ++ G+V+ + + A +FER E D ++ A+
Sbjct: 12 DLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTA----RALFERMPERDIVSWNAMLSGY 67
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK----------- 190
A+ + E +I +K+ + + N L+ Y + ++E A +F+
Sbjct: 68 AQNGFVDEAREI---FYKMPLKNGI-SWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWN 123
Query: 191 ---------------QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESI 235
M Q+ SWSA+IA ++ NG E L F EM + C R S
Sbjct: 124 CLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRD-CERLNRSS 182
Query: 236 LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMA 295
LS C+++ AL+LG+ H L++ V +L+ MY KCG +++ F+ +
Sbjct: 183 FTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEIL 242
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+K ++++ MI G A HG G+EAL++F M G+ PDD V VL+ACSHAGLV++G
Sbjct: 243 EKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSE 302
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M +Y I + HY C+VDL+GRAG L EA L+++MP + + W +LL AS++H
Sbjct: 303 YFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIH 362
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
N E+GE AA+ +F++ H+ Y+LLS +YA + RW D K+R EM +KG+ + PG+S
Sbjct: 363 GNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSW 422
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
+EV K++ F D SHP D IY + +M+ +LK EGY + V DV+E+EK LK
Sbjct: 423 LEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLK 482
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLA+A+ ++++ G PIR+ +NLR+C DCH K IS I R II+RD RFH F+
Sbjct: 483 YHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFE 542
Query: 596 DGTCSCRDYW 605
G+CSCRD+W
Sbjct: 543 GGSCSCRDFW 552
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 28 RLKEQECLTILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDY 83
RL L TC N LE +++H ++K G+ + + L+A C GS+D
Sbjct: 177 RLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKC---GSIDE 233
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A F++I E +NT+I G+ + EEAL ++ M G+ PD+ T ++ AC+
Sbjct: 234 ARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSH 293
Query: 144 LQALKEGMQ-IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWS 201
+ +G + + G L ++++ G+ ++E A + K M + A+W
Sbjct: 294 AGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWG 353
Query: 202 AIIAA---HASNGLWSECLKLFGEMNNEKCWRPEES---ILVSVLSACT 244
A++ A H + L + ++ EM P S IL+S L A +
Sbjct: 354 ALLGASRIHGNTELGEKAAQIIFEM------EPHNSGMYILLSKLYAAS 396
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 310/525 (59%), Gaps = 6/525 (1%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
++ A +F Q+ + + T+I + K ++AL L M V P+ +T+ ++ ++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C + ++ +H + K G E D+FV+++LI+++ K + E A ++F +M W
Sbjct: 172 CNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
++II A N L+LF M + E++ L SVL ACT L L+LG H ++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ L I+ +L+DMY KCG LE L +F M ++ +T+S MISGLA +G +EAL
Sbjct: 288 KYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M G +P+ + VGVL ACSHAGL+ +G F MK Y I P +HYGC++DL+
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
G+AG L +A++L+ M + + V WR+LL A +V N+ + E AAK + ++ Y
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA +Q+W V +IRT M +G+ + PG S +EV ++++ F+ D SHP + +
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSK 525
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
++Q+ +L GY P+ + VL+D++ ++ + L+ HS+KLA+AF L+ L IRI +
Sbjct: 526 KLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRK 585
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH + KL S + R I++RD R+H F+DG CSC DYW
Sbjct: 586 NLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 48/314 (15%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++L++C + + + +H ++K G + F S L+ A G + A S+F ++
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA--KLGEPEDALSVFDEMVTGD 224
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
A +N++I GF + + AL L+ M G + T ++ +AC L L+ GMQ H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
H+ K ++ DL + N+L++MY KC +E A +F QM ++ V +WS +I+ A NG E
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
LKLF M + +P +V VL AC+H
Sbjct: 343 ALKLFERMKSSGT-KPNYITIVGVLFACSH------------------------------ 371
Query: 276 DMYVKCGCLEKGLCLFRMMA-----DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
G LE G FR M D + Y MI L G+ +A+ + +EM
Sbjct: 372 -----AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---EC 423
Query: 331 EPDDVVYVGVLSAC 344
EPD V + +L AC
Sbjct: 424 EPDAVTWRTLLGAC 437
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 14/304 (4%)
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ A+ + + G+ D+ T+ L K C +A+ EG I H++ G +F+ N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
LINMY K + A +F QM Q++V SW+ +I+A++ + + L+L M + R
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-R 159
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P SVL +C + + + H +I+ +V V ++LID++ K G E L +
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F M + ++ +I G A + + AL +F M R G + VL AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 351 NEGLLCFDRMKLEYRIVPTVQHY---GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G M+ IV Q +VD+ + G L +AL + M +++ + W +
Sbjct: 277 ELG------MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWST 329
Query: 408 LLSA 411
++S
Sbjct: 330 MISG 333
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/562 (35%), Positives = 303/562 (53%), Gaps = 36/562 (6%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A I + E +N +I G++ FE+AL L+ +M GV+ D T+ ++
Sbjct: 237 GDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVI 296
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECD----LFVQNSLINMYGKCEKV------------ 182
ACA G Q+H ++ K D L V N+LI +Y K KV
Sbjct: 297 SACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPV 356
Query: 183 -------------------EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
E A + F QM +K++ +W+ +I+ A NG + LKLF +M
Sbjct: 357 KDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQM 416
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ + P + ++AC+ LGAL+ G+ H ++ + V ++I MY +CG
Sbjct: 417 KLDG-YEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGI 475
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+E +F M ++++ MI+ L HG G +A+ ++ +ML+EG+ PD ++ VLSA
Sbjct: 476 VEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSA 535
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CSHAGLV EG F+ M Y I P HY ++DL RAG +A +I SMP +
Sbjct: 536 CSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAP 595
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
+W +LL+ + H N+++G AA+ LF++ H YVLLSNMYA RW DVA+ R M
Sbjct: 596 IWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMR 655
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
+G+ + P S EV KV+ F+ D HP +IY + ++ ++K GY PD VL
Sbjct: 656 DRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLH 715
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++ + K L HS+KLA+AF L+ L QG+ +R+ +NLR+C DCH K +S + REI
Sbjct: 716 DMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREI 775
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
+VRD KRFH FK+G CSCR+YW
Sbjct: 776 VVRDGKRFHHFKNGECSCRNYW 797
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 207/508 (40%), Gaps = 125/508 (24%)
Query: 25 LNLRLKEQECLTILKTC--KNLEEF---KKVHAHVLKWGF-------------FW----- 61
L++R+ L C +NL + + VH HV+ GF +W
Sbjct: 5 LDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDF 64
Query: 62 -----------NPFCASNLVATCALSHWGSMDYACSIFRQ--IDEPGAFDFNTLIRGFVK 108
P + A S G++ A IF + +D +N +I G+
Sbjct: 65 VYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSH 124
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL-QALKEGMQIHGHVFKVGFECDLF 167
+ A+ L+ M +PD+FTF ++ A + ++ Q+HG V K G E
Sbjct: 125 MNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPA 184
Query: 168 VQNSLINMYGKC-----------------------EKVEF-----------------ASA 187
V N+L+++Y KC ++ EF A
Sbjct: 185 VLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGARE 244
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
I M ++ +W+A+I+ + +GL+ + L LF +M + +ES SV+SAC G
Sbjct: 245 ILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGV-QVDESTYTSVISACADGG 303
Query: 248 ALDLGKCTHGSLIRN-----------------------------------ISALNVIVET 272
LGK H +++N + ++I
Sbjct: 304 FFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWN 363
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+ YV G +E+ F M +K LT++VMISGLA +G G++AL +F++M +G EP
Sbjct: 364 TLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEP 423
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV-----PTVQHYGCVVDLMGRAGMLG 387
+D + G ++ACS G + G +L +IV T+ ++ + R G++
Sbjct: 424 NDYAFAGAITACSVLGALENG------RQLHAQIVHLGHDSTLSVGNAMITMYARCGIVE 477
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH 415
A + +MP + V W S+++A H
Sbjct: 478 AARTMFLTMPF-VDPVSWNSMIAALGQH 504
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/559 (35%), Positives = 311/559 (55%), Gaps = 5/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H V+K F N F + + S ++ +F ++ E +N +I +
Sbjct: 261 QQIHGFVVKTSFIRNVFVGNAFLDF--YSKHDCVNEVRKLFNEMPELDGVSYNVIITAYA 318
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +E++ L+ E+ + NF FP + A L+ G Q+H V + D
Sbjct: 319 WVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFR 378
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSL++MY KC K E A IF ++ +S W+A+I+A+ GL LKLF EM
Sbjct: 379 VSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRAN 438
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+++ VL A +L ++ LGK H +IR+ +NV +L+DMY C ++
Sbjct: 439 V-SADQATFACVLKASANLASILLGKQLHSCVIRS-GFMNVYSGCALLDMYANCASIKDA 496
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+ F M+++ +T++ ++S A +G GK L F EM+ G +PD V ++ +L+ACSH
Sbjct: 497 IKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHC 556
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
LV EGL F+ M Y + P +HY +VD + R+G EA +L+ MP + +++VW S
Sbjct: 557 RLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTS 616
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+L++ ++H N + AA LF + + YV +SN++A A +W V K++ M +G
Sbjct: 617 VLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRG 676
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + P +S VE+ KV+ F + D HP I I + Q++ EGY PDIS ++VD
Sbjct: 677 VRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVD 736
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
++ K + LK HS++LAIAFALI+ +GSPI + +NLR C DCH K+IS I REI VR
Sbjct: 737 KESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVR 796
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH F+DG+CSC DYW
Sbjct: 797 DSNRFHHFRDGSCSCGDYW 815
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 179/381 (46%), Gaps = 11/381 (2%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L C +LE E + HA ++K G N + L+ + + G +D A +F ++
Sbjct: 144 ITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKT--GGLDSARRLFLEM 201
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ FN +I G+ EEA+ L+ EM G +P +FTF A+ A L G
Sbjct: 202 CGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQ 261
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIHG V K F ++FV N+ ++ Y K + V +F +M + S++ II A+A G
Sbjct: 262 QIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVG 321
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + LF E+ R + A + L L +G+ H ++ +++ + V
Sbjct: 322 KVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLD-LQMGRQLHAQVVVSMADPDFRVS 380
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
SL+DMY KCG E+ +F ++ + + ++ MIS G + L +F EM R +
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVS 440
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC-VVDLMGRAGMLGEAL 390
D + VL A ++ + LL R + GC ++D+ + +A+
Sbjct: 441 ADQATFACVLKASANLASI---LLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAI 497
Query: 391 ELIQSMPIQQNDVVWRSLLSA 411
+ + M ++N V W +LLSA
Sbjct: 498 KTFEEMS-ERNVVTWNALLSA 517
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 162/339 (47%), Gaps = 13/339 (3%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A IF DE + T+I + K F +A L+ EM G +PD T+ L
Sbjct: 88 GNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLL 147
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
C L+ KE Q H + K+G + V N+L++ Y K ++ A +F +M
Sbjct: 148 TGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSV 207
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
S++ +I +A+NGL E ++LF EM N ++P + +V+SA L G+ HG
Sbjct: 208 SFNVMITGYANNGLNEEAIELFVEMQNLG-FKPSDFTFAAVISASVGLDDTAFGQQIHGF 266
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+++ NV V + +D Y K C+ + LF M + ++Y+V+I+ A G+ KE+
Sbjct: 267 VVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKES 326
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIV-----PTVQHY 373
+ +F E+ + + + +LS + + + G +L ++V P +
Sbjct: 327 IDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMG------RQLHAQVVVSMADPDFRVS 380
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
+VD+ + G EA + + ++ V W +++SA+
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLS-SRSTVPWTAMISAN 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 1/177 (0%)
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
F + +I+ Y K + A IF D+++V +W+ +I A++ + + + KLF EM+
Sbjct: 75 FSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRS 134
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+P+ +++L+ C L H +++ LN V +L+D Y K G L+
Sbjct: 135 GS-QPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDS 193
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
LF M ++++VMI+G A +G +EA+ +F EM G +P D + V+SA
Sbjct: 194 ARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISA 250
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
RN ++++I I YVK G L +F ++ + ++ MI + + +A
Sbjct: 72 RNSFSIDII-----ISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFK 126
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNE 352
+F+EM R G +PD V Y+ +L+ C+ + E
Sbjct: 127 LFAEMHRSGSQPDYVTYITLLTGCNDLEVAKE 158
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 311/557 (55%), Gaps = 31/557 (5%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F ++ + +I G+ + EEAL L + G+ P + + F
Sbjct: 366 GMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSF 425
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC+ + AL+ G Q+H K G + + +V N+LI+MYGKC +E+ +F +M K
Sbjct: 426 LACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTV 485
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKC--W--------------------------- 229
SW++ IAA N + + +F M + W
Sbjct: 486 SWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEH 545
Query: 230 -RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+P IL +LS C LG+ LG+ H I++ +IV +L+ MY KCGC +
Sbjct: 546 EKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHK 605
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M ++ T++ I+G A HG G+EA+ ++ M G+ P++V +VG+L+ACSHAG
Sbjct: 606 -VFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAG 664
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
LV+EG F M +Y + P ++HY C+VDL+GR G + A + I MPI+ + V+W +L
Sbjct: 665 LVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSAL 724
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A K+H N EIG AA+ LF + +YV+LSN+Y+ W +VA++R M +G++
Sbjct: 725 LGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVS 784
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
+ PG S +++ KV+ FV+ D+ H + I + + L+ GY PD VL D+DE+
Sbjct: 785 KEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEE 844
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
+K L HS+KLA+A+ L+ +G PI+I +NLR+C DCHT+ K +S + +R+I +RD
Sbjct: 845 QKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDG 904
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F++G+CSC D+W
Sbjct: 905 NRFHHFRNGSCSCGDFW 921
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 171/380 (45%), Gaps = 23/380 (6%)
Query: 77 HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
H M A ++F+Q+ + + +I G+V+ + + ++ M G PD F +
Sbjct: 169 HSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFAS 228
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK-CEKVEFASAIFKQMDQK 195
+ A LQ L + V K GFE D+ + S++N+Y + ++ A F M ++
Sbjct: 229 VLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVER 288
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ +WS +IAA + G + ++G + P ++ L++ L+ C G+ T
Sbjct: 289 NEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI--PSQTALLTGLARC--------GRIT 338
Query: 256 HGS-LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
L I V+ ++I Y++ G +++ LF M + ++++ MI+G A +G+
Sbjct: 339 EARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGR 398
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+EAL + + R G+ P ACSH G + G L + Y
Sbjct: 399 SEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH---SLAVKAGCQFNSYV 455
Query: 375 C--VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLF-QI 431
C ++ + G+ + ++ M + ++ V W S ++A ++ LE A+++F +
Sbjct: 456 CNALISMYGKCRNMEYVRQVFNRMRV-KDTVSWNSFIAALVQNNMLE----DARHIFDNM 510
Query: 432 NSHHPSDYVLLSNMYARAQR 451
S + + + YA+A+R
Sbjct: 511 LSRDVVSWTTIISAYAQAER 530
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 132/316 (41%), Gaps = 53/316 (16%)
Query: 35 LTILKTCKNLEEFKKVHAHV-LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+++ C+N+E ++V + +K WN F A AL ++ A IF +
Sbjct: 460 ISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIA-------ALVQNNMLEDARHIFDNMLS 512
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ T+I + + +EA+ + M +P++ L C L + K G QI
Sbjct: 513 RDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQI 572
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K G + +L V N+L++MY KC + + +F M+++ + +W+ I A +GL
Sbjct: 573 HTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLG 631
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E +K++ M + P E V +L+AC+H G +D
Sbjct: 632 REAIKMYEHMESVGVL-PNEVTFVGLLNACSHAGLVD----------------------- 667
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSIFSEMLRE 328
+G F+ M+ LT Y+ M+ L G + A +M
Sbjct: 668 ------------EGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDM--- 712
Query: 329 GLEPDDVVYVGVLSAC 344
+EPD V++ +L AC
Sbjct: 713 PIEPDTVIWSALLGAC 728
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 168/388 (43%), Gaps = 38/388 (9%)
Query: 28 RLKEQECLTILKTCKNLEEFKKV-HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACS 86
R++E L L+ + E F + H ++ W + +C S G ++ A
Sbjct: 39 RIRELARLGRLREAR--EVFDAMPHRDIIAWNSMISAYCNS-----------GMLEDARI 85
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F I L+ G+ + +A +++ M ER + A
Sbjct: 86 LFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNT--------VAWNAMVSCYV 137
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
+ + +F D+ NS++ Y ++ A +FKQM Q+++ +W+ +I+
Sbjct: 138 QNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISG 197
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ + +F M++E P++S SVLSA T L L + + +++
Sbjct: 198 YVRIEQHGKGWDIFRMMHHEGA-SPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFES 256
Query: 267 NVIVETSLIDMYVK-CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
+V++ TS++++Y + L+ + F M ++ + T+S MI+ L+ G+ A++++
Sbjct: 257 DVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY--- 313
Query: 326 LREGLEPDDVV--YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
G +P + +L+ + G + E + F+++ P V + ++ +
Sbjct: 314 ---GRDPVKSIPSQTALLTGLARCGRITEARILFEQIP-----DPIVVSWNAMITGYMQN 365
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSA 411
GM+ EA EL MP +N + W +++
Sbjct: 366 GMVDEAKELFDRMPF-RNTISWAGMIAG 392
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 312/543 (57%), Gaps = 9/543 (1%)
Query: 64 FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK-EVEFEEALFLYNEM 122
F +++LV+ A +G +D A +F ++ E + T++ + EEAL M
Sbjct: 116 FVSNSLVSMYA--KFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAM 173
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
+ GV P+ +TF ++ AC L +H KVG + D+FV++SLI+ Y K +
Sbjct: 174 WRDGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMKLGDL 230
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
+ +F +M + + W++IIA A +G ++LF M + + + L SVL A
Sbjct: 231 DGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAG-FSANQGTLTSVLRA 289
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
CT + L+ G+ H +++ ++I+ +L+DMY KCG LE LF M + +++
Sbjct: 290 CTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISW 347
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
S MISGLA +G+ EAL +F M EG+ P+ + VGVL ACSHAGLV +G F MK
Sbjct: 348 STMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKK 407
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+ I P +H+ C+VDL+GRAG L EA+E I+ M ++ + V+WR+LL A ++H + +
Sbjct: 408 LFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAA 467
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
AA+ + ++ VLLSN YA ++W D K M +G+ + PG S +E+ + V
Sbjct: 468 YAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHV 527
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
+ F++ D SHP D I + ++++ ++ GY P VL+D+ ++K + LK HS+K+A
Sbjct: 528 HVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMA 587
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF +H G PIRI +NLR+C DCH + KL+S R II+RD RFH F+DG CSC
Sbjct: 588 IAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDGACSCG 647
Query: 603 DYW 605
DYW
Sbjct: 648 DYW 650
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 136/296 (45%), Gaps = 27/296 (9%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHV--------FKVGFECDLFVQNSLINMYGKCEK 181
D + L K C + +G IH HV + G +FV NSL++MY K
Sbjct: 71 DPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGL 130
Query: 182 VEFASAIFKQMDQKSVASWSAIIAAHA-SNGLWSECLKLFGEMNNEKCWR----PEESIL 236
++ A +F +M +++V +W+ ++AA A ++G E L+ M WR P
Sbjct: 131 LDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAM-----WRDGVAPNAYTF 185
Query: 237 VSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD 296
SVL AC G L H S ++ +V V +SLID Y+K G L+ G +F M
Sbjct: 186 SSVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVT 242
Query: 297 KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLC 356
+ + ++ +I+G A G G A+ +F M G + VL AC+ ++ G
Sbjct: 243 RDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQV 302
Query: 357 FDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+K E ++ + ++D+ + G L +A L MP Q++ + W +++S
Sbjct: 303 HAHVLKYERDLI----LHNALLDMYCKCGSLEDAEALFHRMP-QRDVISWSTMISG 353
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 33/244 (13%)
Query: 1 MTRTSVLHQSLL--LTQPEEPPKGPELNLRLKE------QECLT-ILKTCKN---LEEFK 48
+TR V+ S++ Q + EL +R+K+ Q LT +L+ C LE +
Sbjct: 241 VTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGR 300
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHW----GSMDYACSIFRQIDEPGAFDFNTLIR 104
+VHAHVLK+ +L+ AL GS++ A ++F ++ + ++T+I
Sbjct: 301 QVHAHVLKY--------ERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMIS 352
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV-GFE 163
G + + EAL +++ M GV P+ T + AC+ +++G + K+ G +
Sbjct: 353 GLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQ 412
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAA---HASNGLWS----E 215
+ N ++++ G+ K++ A + M+ + W ++ A H S L + E
Sbjct: 413 PEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAARE 472
Query: 216 CLKL 219
LKL
Sbjct: 473 ILKL 476
>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
Length = 635
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/567 (36%), Positives = 312/567 (55%), Gaps = 9/567 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+ E K++H H++ GF + + + LV GS+ A S+F F + ++
Sbjct: 73 IAEGKRIHYHIVLCGFKSSRYLCNLLVEM--YGKCGSLQAAKSVFHITPRRNVFSWTIMV 130
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
F + +AL L M G+ P++ TF L A A L L G +H + GF
Sbjct: 131 AAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRRIACCGFL 190
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+FV N LINMY KC + A ++F+ + +SV +W+A++AA+A NG + + LK+F M
Sbjct: 191 ADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLM 250
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ P E V+V+ C + +G+ HG +I S NV V +LI+MY KC
Sbjct: 251 TLDGV-EPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKCAS 308
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF-----SEMLREGLEPDDVVYV 338
++ +F M K +T++ MI+ +G G +AL I+ S M G+ DD+ ++
Sbjct: 309 PDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFI 368
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
GVL ACSHAGLV + + M +Y PT GC++DL+GRAG L EA E I SMP
Sbjct: 369 GVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPY 428
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ +W LL A H ++E AA + + YV LSN+YA A+RW D+A++
Sbjct: 429 HPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERWDDMARM 488
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M +G+ + G S +E+ +++F++ D SHP IYE + ++E ++ GY PDI
Sbjct: 489 RKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRERGYVPDI 548
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
VL + + K + HS++LAIAF +I G+ +RI +NLR+C DCH+ TK+IS
Sbjct: 549 KAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSATKIISKF 608
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
R+IIVRD RFH F++G+CSC DYW
Sbjct: 609 SGRKIIVRDANRFHEFRNGSCSCEDYW 635
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 124 ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVE 183
+R V P + C A+ EG +IH H+ GF+ ++ N L+ MYGKC ++
Sbjct: 50 DRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQ 109
Query: 184 FASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
A ++F +++V SW+ ++AA A NG + + L L M+ E P + +L A
Sbjct: 110 AAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGI-SPNSITFIELLGAV 168
Query: 244 THLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYS 303
L LD G+ H + ++ V LI+MY KC L +F + + + ++
Sbjct: 169 AALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWT 228
Query: 304 VMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLE 363
+++ A++G ++AL +F M +G+EP +V +V V+ C+ + G ++
Sbjct: 229 ALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG--VID 286
Query: 364 YRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLS 410
R V ++++ G+ EA ++ +M Q+ D++ W S+++
Sbjct: 287 ARSEANVCVGNALINMYGKCASPDEARKVFDAM--QRKDIITWNSMIA 332
>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
Length = 956
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/621 (34%), Positives = 342/621 (55%), Gaps = 56/621 (9%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ IL L F++ +H +V++ GF N F ++L+ S GS+ A +F+ +
Sbjct: 342 VKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL--YSKCGSLGDAVKLFKGM 399
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEM----------FERGVEPDNFTFPALFKAC 141
++++I + EAL ++++M ++ ++P P +C
Sbjct: 400 IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQP-QVQPPLAITSC 458
Query: 142 A-------KLQALKEGMQIH----GH-------------------VFKVGFECDLFVQNS 171
K++A M+ H GH +F G + D +
Sbjct: 459 TLATHIPWKVKAFY--MRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTK 516
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
MY +++ AS +F+ + W+ +I A++G + L+L+ +M EK +P
Sbjct: 517 FAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMM-EKGLKP 575
Query: 232 EESILV-------SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ S ++ SVL AC +LGAL G+ H +I+ +++V T+++DMY KCG L
Sbjct: 576 DNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSL 635
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ CLF A K + +S MI+ +HG G++A+ +F +M++ G+ P V + VLSAC
Sbjct: 636 DLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 695
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
SH+GL+ EG + F M E+ I + +Y C+VDL+GRAG L EA++LI++MP++ + +
Sbjct: 696 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 755
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMAS 464
W SLL A ++H+NL++ E A +LF ++ H +VLLSN+YA RW +V K+R MA
Sbjct: 756 WGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMAR 815
Query: 465 KGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD 524
+G N+ GFSLVE +V+KF DRSHP W+ +Y + ++ +K GY P VL D
Sbjct: 816 RGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHD 875
Query: 525 VDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREII 584
++E+ K L HS++LAIAF LI+ S G+ +RI +NLR+C DCH KLIS I R I+
Sbjct: 876 IEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKLISKIVNRVIL 935
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRD RFHRF+DG CSC DYW
Sbjct: 936 VRDMHRFHRFEDGVCSCGDYW 956
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 180/407 (44%), Gaps = 83/407 (20%)
Query: 11 LLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLV 70
L++ E P + + LK L +L+ K + F K + + + F S LV
Sbjct: 92 LMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS-----DMFVGSALV 146
Query: 71 ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
S G M A +F + P + +++ G+ + + EEAL L+++M
Sbjct: 147 EL--YSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM-------- 196
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK--CEKVEFASAI 188
V F+ DL + NSL+N+Y K CEK+ A+ +
Sbjct: 197 --------------------------VMMDCFDGDLPLVNSLLNLYAKTGCEKI--AANL 228
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F +M +K V SWS +IA +A+N +E L LF EM EK + P +VS L AC
Sbjct: 229 FSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI-EKRFEPNSVTVVSALQAC----- 282
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
++ RN LE+G + ++ K +++ ++SG
Sbjct: 283 ---------AVSRN---------------------LEEGKKIHKIAVWKDVVSWVALLSG 312
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
A +G +++ +F ML +G++PD V V +L+A S G+ + LC +
Sbjct: 313 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQA-LCLHGYVVRSGFNS 371
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V +++L + G LG+A++L + M I ++ V+W S+++A +H
Sbjct: 372 NVFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMIAAYGIH 417
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 36/249 (14%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G A ++F ++ E ++T+I + EAL L++EM E+ EP++ T +
Sbjct: 220 GCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSAL 279
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ACA + L+EG +IH K K V
Sbjct: 280 QACAVSRNLEEGKKIH-----------------------------------KIAVWKDVV 304
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW A+++ +A NG+ + + +F M ++ +P+ +V +L+A + LG C HG
Sbjct: 305 SWVALLSGYAQNGMAYKSMGVFRNMLSDGI-QPDAVAVVKILAASSELGIFQQALCLHGY 363
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
++R+ NV V SLI++Y KCG L + LF+ M + + +S MI+ +HG+G EA
Sbjct: 364 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 423
Query: 319 LSIFSEMLR 327
L IF +M++
Sbjct: 424 LEIFDQMIQ 432
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/585 (35%), Positives = 339/585 (57%), Gaps = 11/585 (1%)
Query: 27 LRLKEQECLTILKTCKNLEEF----KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
++L + IL C +LE F K++H +++ + ++LV A G MD
Sbjct: 223 IKLDRFSVIGILGAC-SLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYA--KCGRMD 279
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKAC 141
YA +F QI + +N +I G+ + E+ +M E G + PD T L C
Sbjct: 280 YAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPC 339
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A+L+A+ G +HG + GF L ++ +L++MYG+C K++ A +F QM+++++ SW+
Sbjct: 340 AQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWN 399
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+IA++ NG + + LF ++ N K +P+ + + S+L A L +L + HG + +
Sbjct: 400 AMIASYTKNGENRKAMTLFQDLCN-KTLKPDATTIASILPAYAELASLREAEQIHGYVTK 458
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
N V S++ MY KCG L + +F M K ++++ +I A+HG G+ ++ +
Sbjct: 459 LKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIEL 518
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
FSEM +G EP+ +V +L +CS AGLVNEG F+ MK +Y I P ++HYGC++DL+G
Sbjct: 519 FSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIG 578
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
R G L A I+ MP+ +W SLL+AS+ ++E+ EIAA+++ + + YVL
Sbjct: 579 RTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVL 638
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSNMYA A RW DV +I+ M +GL +S G S+V+++ K ++FV+QDRS + +Y++
Sbjct: 639 LSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDV 698
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKR-ERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ + ++ + Y +++ R D ++KR K HS +LAI F LI + G+P+ + +
Sbjct: 699 LDIISKKIGEDVYVHSLTK-FRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRK 757
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
N+R+C CH + K IS +REIIVRD K FH F G CSC DYW
Sbjct: 758 NIRICEACHRFAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 183/346 (52%), Gaps = 11/346 (3%)
Query: 72 TCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
T ALS + G M A +F + + F +N +IRGFV F +A+ Y+ M GV
Sbjct: 64 TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
DNFT+P + KAC L L EG ++HG V K G + D+++ NSLI MY K +E A +
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA 248
F++M + + SW+++I+ + S G L F EM + + ++ +L AC+ G
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGI-KLDRFSVIGILGACSLEGF 242
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L GK H ++R+ L+V+V+TSL+DMY KCG ++ LF + DK + ++ MI G
Sbjct: 243 LRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGG 302
Query: 309 LAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSH--AGLVNEGLLCFDRMKLEYR 365
+++ Q E+ + +M G L PD + + +L C+ A L+ + + F +
Sbjct: 303 YSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGF---AIRNG 359
Query: 366 IVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+P + +VD+ G G L A L M ++N + W +++++
Sbjct: 360 FLPHLVLETALVDMYGECGKLKPAECLFGQMN-ERNLISWNAMIAS 404
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 200/386 (51%), Gaps = 15/386 (3%)
Query: 37 ILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++K C +L E ++VH V+K G + + ++L+ A G ++ A +FR++
Sbjct: 132 VIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYA--KIGCIESAEMVFREMPV 189
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+N++I G+V + +L + EM G++ D F+ + AC+ L+ G +I
Sbjct: 190 RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEI 249
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H + + E D+ VQ SL++MY KC ++++A +F Q+ KS+ +W+A+I ++ N
Sbjct: 250 HCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQS 309
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E +M P+ ++++L C L A+ LGK HG IRN ++++ET+
Sbjct: 310 FESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETA 369
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L+DMY +CG L+ CLF M ++ ++++ MI+ +G+ ++A+++F ++ + L+PD
Sbjct: 370 LVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPD 429
Query: 334 DVVYVGVLSACSHAGLVNEGLLC---FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+L A + + E ++KL+ + +V + G+ G L A
Sbjct: 430 ATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS----NSIVFMYGKCGNLLRAR 485
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVH 415
E+ M + DV+ W +++ A +H
Sbjct: 486 EIFDRMTFK--DVISWNTVIMAYAIH 509
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/592 (35%), Positives = 329/592 (55%), Gaps = 13/592 (2%)
Query: 25 LNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLVATCALSHWGS 80
L +R + L C LE +++HA+V+K N F AS LV A
Sbjct: 267 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE--Q 324
Query: 81 MDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPAL 137
+ A +F + + G +N +I G+ + EEAL L+ M E G P T ++
Sbjct: 325 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 384
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA+ +A +HG+V K G + FVQN+L++MY + K + A IF +D V
Sbjct: 385 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 444
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNN--EKCWRPEESILVSVLSACTHLGALDLGKCT 255
SW+ +I G ++ +L EM E P L+++L C L A GK
Sbjct: 445 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 504
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ +V V ++L+DMY KCGCL +F + + +T++V+I MHG G
Sbjct: 505 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 564
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
EA +F M G P++V ++ L+ACSH+G+V+ GL F M+ ++ + PT
Sbjct: 565 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 624
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
CVVD++GRAG L EA ++ SM + V W ++L A ++H N+ +GEIA + L ++
Sbjct: 625 CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 684
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
S YVLL N+Y+ A +W A++R+ M +G+ + PG S +EV +++F++ + +HP
Sbjct: 685 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 744
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
A + ++ + + ++ GY+PD S VL D+D+ +K L+ HS+KLAIAF L+ + G
Sbjct: 745 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 804
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ IR+A+NLR+CNDCH K +S + REI++RD +RFH F++G CSC DYW
Sbjct: 805 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)
Query: 94 PGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
PG D +NT++ V+ F+EA+ +M GV PD TF + AC++L+ L G
Sbjct: 233 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 292
Query: 151 MQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAH 207
++H +V K + FV ++L++MY E+V A +F + K + W+A+I +
Sbjct: 293 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 352
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A G+ E L+LF M E + P E+ + SVL AC A + HG +++ A N
Sbjct: 353 AQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGN 412
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-- 325
V+ +L+DMY + G + +F M+ ++++ +I+G + G +A + EM
Sbjct: 413 RFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQ 472
Query: 326 LRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
L E G+ P+ + + +L C+ G + + + V +VD+ + G
Sbjct: 473 LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG-YAVRHALDTDVAVGSALVDMYAKCG 531
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L + + +P ++N + W L+ A +H
Sbjct: 532 CLALSRAVFDRLP-RRNTITWNVLIMAYGMH 561
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 21/351 (5%)
Query: 9 QSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
S+ + P++ L +K L ++ + +HA L+ G P A
Sbjct: 46 SSITMASPQQQLDHSALPPAIKSAAAL------RDARSARAIHAAALRRGLLHRPSPAVA 99
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPG--AFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
A + G + A +F I + A FN+LI ++ AL M G
Sbjct: 100 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 159
Query: 127 VEPDNFTFPALFKACAKL----QALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKCE 180
+FT ++ +A + L A++ G + H K G F N+L++MY +
Sbjct: 160 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 219
Query: 181 KVEFASAIFKQM--DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
V A +F + V +W+ +++ +G++ E ++ +M RP+ S
Sbjct: 220 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFAS 278
Query: 239 VLSACTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
L AC+ L LD+G+ H +I++ A N V ++L+DMY + K +F M+ D
Sbjct: 279 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 338
Query: 298 CQL--TYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACS 345
+ ++ MI G A G +EAL +F+ M E G P + VL AC+
Sbjct: 339 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 389
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/527 (37%), Positives = 301/527 (57%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F F + ++ G+ + EEA +++ M ER + ++ A+
Sbjct: 113 GDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMV 168
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A + + + E ++ F + ++ N+++ Y + +E A A+F M QK
Sbjct: 169 AAYIQRRMMDEAKEL----FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAV 224
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++AA++ G E L+LF EM W S VLS C + AL+ G HG
Sbjct: 225 SWAAMLAAYSQGGCSEETLQLFIEMGRCGEW-VNRSAFACVLSTCADIAALECGMQLHGR 283
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LIR + V +L+ MY KCG +E F M ++ ++++ MI+G A HG GKEA
Sbjct: 284 LIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEA 343
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L IF M +PDD+ VGVL+ACSH+GLV +G+ F M ++ + +HY C++D
Sbjct: 344 LEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMID 403
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L EA +L++ MP + + +W +LL AS++H N E+G AA+ +F++ +
Sbjct: 404 LLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGM 463
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + +W D K+R M +G+ + PGFS +EV KV+ F + D HP + I
Sbjct: 464 YVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKI 523
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++K GY VL DV+E+EK LK HS+KLA+A+ ++++ G PIR+
Sbjct: 524 YAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRV 583
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K IS I R I++RD RFH F+ G+CSC DYW
Sbjct: 584 IKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 21/248 (8%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D N +I+ + V A F +K SW+ ++AA+ NG E LF N
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF---N 61
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHG-SLIRNISALNVIVETSLIDMYVKCGC 283
+ W + I + L + G + GK + L + +V+ ++ Y + G
Sbjct: 62 SRTEW---DVISWNALMS----GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGD 114
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
+ + LF + T++ ++SG A +G +EA +F M E + V + +++A
Sbjct: 115 MVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAA 170
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
+++E F+ M V + ++ +AGML EA + +MP Q++ V
Sbjct: 171 YIQRRMMDEAKELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAV 224
Query: 404 VWRSLLSA 411
W ++L+A
Sbjct: 225 SWAAMLAA 232
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 129/350 (36%), Gaps = 66/350 (18%)
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
H F + E D N ++ Y + +VE A +F + V SW+A+++ + G SE
Sbjct: 27 HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSE 86
Query: 216 CLKLFGEMNNEKC--WR----------------------PEESIL--VSVLSACTHLGAL 249
+LF M W P + +V+S G L
Sbjct: 87 ARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGML 146
Query: 250 DLGKCTHGSLI-RNISALNVIVE--------------------------TSLIDMYVKCG 282
+ + ++ RN + N +V +++ Y + G
Sbjct: 147 EEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAG 206
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
LE+ +F M K ++++ M++ + G +E L +F EM R G + + VLS
Sbjct: 207 MLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLS 266
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD-----LMGRAGMLGEALELIQSMP 397
C+ + G M+L R++ GC V + + G + +A + M
Sbjct: 267 TCADIAALECG------MQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM- 319
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
++ DVV + + A H + ++ + S P D L+ + A
Sbjct: 320 -EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAA 368
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/592 (35%), Positives = 329/592 (55%), Gaps = 13/592 (2%)
Query: 25 LNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLVATCALSHWGS 80
L +R + L C LE +++HA+V+K N F AS LV A
Sbjct: 265 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE--Q 322
Query: 81 MDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPAL 137
+ A +F + + G +N +I G+ + EEAL L+ M E G P T ++
Sbjct: 323 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 382
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA+ +A +HG+V K G + FVQN+L++MY + K + A IF +D V
Sbjct: 383 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 442
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNN--EKCWRPEESILVSVLSACTHLGALDLGKCT 255
SW+ +I G ++ +L EM E P L+++L C L A GK
Sbjct: 443 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ +V V ++L+DMY KCGCL +F + + +T++V+I MHG G
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 562
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
EA +F M G P++V ++ L+ACSH+G+V+ GL F M+ ++ + PT
Sbjct: 563 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 622
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
CVVD++GRAG L EA ++ SM + V W ++L A ++H N+ +GEIA + L ++
Sbjct: 623 CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 682
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
S YVLL N+Y+ A +W A++R+ M +G+ + PG S +EV +++F++ + +HP
Sbjct: 683 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 742
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
A + ++ + + ++ GY+PD S VL D+D+ +K L+ HS+KLAIAF L+ + G
Sbjct: 743 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 802
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ IR+A+NLR+CNDCH K +S + REI++RD +RFH F++G CSC DYW
Sbjct: 803 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)
Query: 94 PGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
PG D +NT++ V+ F+EA+ +M GV PD TF + AC++L+ L G
Sbjct: 231 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290
Query: 151 MQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAH 207
++H +V K + FV ++L++MY E+V A +F + K + W+A+I +
Sbjct: 291 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 350
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A G+ E L+LF M E + P E+ + SVL AC A + HG +++ A N
Sbjct: 351 AQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGN 410
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-- 325
V+ +L+DMY + G + +F M+ ++++ +I+G + G +A + EM
Sbjct: 411 RFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQ 470
Query: 326 LRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
L E G+ P+ + + +L C+ G + + + V +VD+ + G
Sbjct: 471 LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG-YAVRHALDTDVAVGSALVDMYAKCG 529
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L + + +P ++N + W L+ A +H
Sbjct: 530 CLALSRAVFDRLP-RRNTITWNVLIMAYGMH 559
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 21/351 (5%)
Query: 9 QSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
S+ + P++ L +K L ++ + +HA L+ G P A
Sbjct: 44 SSITMASPQQQLDHSALPPAIKSAAAL------RDARSARAIHAAALRRGLLHRPSPAVA 97
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPG--AFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
A + G + A +F I + A FN+LI ++ AL M G
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 127 VEPDNFTFPALFKACAKL----QALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKCE 180
+FT ++ +A + L A++ G + H K G F N+L++MY +
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 217
Query: 181 KVEFASAIFKQM--DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
V A +F + V +W+ +++ +G++ E ++ +M RP+ S
Sbjct: 218 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFAS 276
Query: 239 VLSACTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
L AC+ L LD+G+ H +I++ A N V ++L+DMY + K +F M+ D
Sbjct: 277 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 336
Query: 298 CQL--TYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACS 345
+ ++ MI G A G +EAL +F+ M E G P + VL AC+
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 387
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/592 (35%), Positives = 329/592 (55%), Gaps = 13/592 (2%)
Query: 25 LNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLVATCALSHWGS 80
L +R + L C LE +++HA+V+K N F AS LV A
Sbjct: 265 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE--Q 322
Query: 81 MDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPAL 137
+ A +F + + G +N +I G+ + EEAL L+ M E G P T ++
Sbjct: 323 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 382
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA+ +A +HG+V K G + FVQN+L++MY + K + A IF +D V
Sbjct: 383 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 442
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNN--EKCWRPEESILVSVLSACTHLGALDLGKCT 255
SW+ +I G ++ +L EM E P L+++L C L A GK
Sbjct: 443 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 502
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ +V V ++L+DMY KCGCL +F + + +T++V+I MHG G
Sbjct: 503 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 562
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
EA +F M G P++V ++ L+ACSH+G+V+ GL F M+ ++ + PT
Sbjct: 563 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 622
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
CVVD++GRAG L EA ++ SM + V W ++L A ++H N+ +GEIA + L ++
Sbjct: 623 CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 682
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
S YVLL N+Y+ A +W A++R+ M +G+ + PG S +EV +++F++ + +HP
Sbjct: 683 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 742
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
A + ++ + + ++ GY+PD S VL D+D+ +K L+ HS+KLAIAF L+ + G
Sbjct: 743 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 802
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ IR+A+NLR+CNDCH K +S + REI++RD +RFH F++G CSC DYW
Sbjct: 803 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)
Query: 94 PGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
PG D +NT++ V+ F+EA+ +M GV PD TF + AC++L+ L G
Sbjct: 231 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290
Query: 151 MQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAH 207
++H +V K + FV ++L++MY E+V A +F + K + W+A+I +
Sbjct: 291 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 350
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A G+ E L+LF M E + P E+ + SVL AC A + HG +++ A N
Sbjct: 351 AQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGN 410
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-- 325
V+ +L+DMY + G + +F M+ ++++ +I+G + G +A + EM
Sbjct: 411 RFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQ 470
Query: 326 LRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
L E G+ P+ + + +L C+ G + + + V +VD+ + G
Sbjct: 471 LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG-YAVRHALDTDVAVGSALVDMYAKCG 529
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L + + +P ++N + W L+ A +H
Sbjct: 530 CLALSRAVFDRLP-RRNTITWNVLIMAYGMH 559
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 21/351 (5%)
Query: 9 QSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
S+ + P++ L +K L ++ + +HA L+ G P A
Sbjct: 44 SSITMASPQQQLDHSALPPAIKSAAAL------RDARSARAIHAAALRRGLLHRPSPAVA 97
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPG--AFDFNTLIRGFVKEVEFEEALFLYNEMFERG 126
A + G + A +F I + A FN+LI ++ AL M G
Sbjct: 98 NALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGG 157
Query: 127 VEPDNFTFPALFKACAKL----QALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKCE 180
+FT ++ +A + L A++ G + H K G F N+L++MY +
Sbjct: 158 HPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLG 217
Query: 181 KVEFASAIFKQM--DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
V A +F + V +W+ +++ +G++ E ++ +M RP+ S
Sbjct: 218 LVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGV-RPDGVTFAS 276
Query: 239 VLSACTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
L AC+ L LD+G+ H +I++ A N V ++L+DMY + K +F M+ D
Sbjct: 277 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 336
Query: 298 CQL--TYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDVVYVGVLSACS 345
+ ++ MI G A G +EAL +F+ M E G P + VL AC+
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 387
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 306/527 (58%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G++ A +F ++ + LI G+ + EA+ L +M P+ FTF +L
Sbjct: 6 GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLL 65
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KA G Q+H K ++ D++V ++L++MY +CE+++ A +F ++ K+
Sbjct: 66 KATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEV 125
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+IA A L F EM + S+ SA +GAL+ G+ H
Sbjct: 126 SWNALIAGFARKADGETTLMKFAEMQRNG-FGATHFTYSSMFSAFARIGALEQGRWVHAH 184
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LI++ L V +++ MY K G + +F M + +T++ M++ LA +G GKEA
Sbjct: 185 LIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEA 244
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
++ F E+ + G++ + + ++ VL+ACSH GLV EG FD MK +Y + P + HY VD
Sbjct: 245 VAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMK-DYNVQPEIDHYVSFVD 303
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG+L EAL + MP++ VW +LL A ++H N ++G+ AA ++F+++
Sbjct: 304 LLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGP 363
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
VLL N+YA +W D A++R M + G+ + P S V++ V+ FV+ D +HP +I
Sbjct: 364 PVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDI 423
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y M ++ ++K GY P+ + VL ++E E+ +LK HS+K+A+AFALI++ G+ IRI
Sbjct: 424 YRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRI 483
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+N+R+C DCH+ K +S +++REI+VRD RFH F +G+CSC DYW
Sbjct: 484 MKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 118/238 (49%), Gaps = 5/238 (2%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY KC V A +F +M + V SW+ +IA +A N + +E + L +M + +RP
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRAR-FRPNGF 59
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
S+L A G +G+ H ++ +V V ++L+DMY +C ++ + +F +
Sbjct: 60 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
K +++++ +I+G A G+ L F+EM R G Y + SA + G + +G
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179
Query: 355 LCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ K ++ V + ++ + ++G + +A ++ M +++ V W ++L+A
Sbjct: 180 WVHAHLIKSGQKLTAFVGN--TMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTA 234
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
LE+ + VHAH++K G F + ++ A S GSM A +F ++D+ +NT++
Sbjct: 175 LEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKS--GSMVDARKVFDRMDKRDLVTWNTML 232
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV--FKVG 161
+ +EA+ + E+ + G++ + TF ++ AC+ +KEG + + V
Sbjct: 233 TALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQ 292
Query: 162 FECDLFVQNSLINMYGKCEKVEFASA-IFKQMDQKSVASWSAIIAA 206
E D +V S +++ G+ ++ A +FK + + A W A++ A
Sbjct: 293 PEIDHYV--SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGA 336
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/512 (36%), Positives = 297/512 (58%), Gaps = 22/512 (4%)
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+ K EAL +Y EM +EP NF F KACA L+ L G +H V K
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGP 63
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D V N L+ +Y +CE +F QM +++VASW+++I+ E L +F M
Sbjct: 64 DQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQ 123
Query: 225 NEK---CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
E W L ++L C + AL GK H ++++ +V+V SL+DMYVKC
Sbjct: 124 REGMGFSW----VTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLNSLVDMYVKC 179
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G ++ G LF M K +++ M++G A++G + A+ +F+EM G+ PDDV ++ +L
Sbjct: 180 GVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALL 239
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
S CSHAGL +G F RM++++ + P+++HY C+VD++GRAG + AL ++++MP++ +
Sbjct: 240 SGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTS 299
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W SLL++ ++H+ + + E A LF++ ++P +YV+LSN+YA A W V +R
Sbjct: 300 GSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREM 359
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVS--------QDRSHPAWDNIYEMIHQMEWQLKFEG 513
M ++ + + G S ++V K++ FV+ D W+ + E + + G
Sbjct: 360 MQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEF-------G 412
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
Y P+ VL DV+E+ K + GHS++LA F+LIH + G PIRI +NLR+C DCH++ K
Sbjct: 413 YIPNTDVVLHDVNEETKAMWVCGHSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIK 472
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
++S + R I++RD RFH FK+G CSC DYW
Sbjct: 473 IVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 11/320 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T LK C +L E + VHA V+K + + L+ + + +F Q+
Sbjct: 35 TALKACADLRELWVGRGVHAQVVKSSEGPDQVVNNGLLRL--YTQCECFNEVLKVFDQMP 92
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N+LI GFVKE + EAL ++ M G+ T + CA++ AL G +
Sbjct: 93 ERNVASWNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKE 152
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH + K D+ V NSL++MY KC V++ +F M K + SW+ ++ +A NG
Sbjct: 153 IHAQIVKSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGY 212
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ LF EM + RP++ +++LS C+H G + G+ + + +
Sbjct: 213 MRVAMDLFNEMASCGI-RPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHY 271
Query: 273 S-LIDMYVKCGCLEKGLCLFRMMADKCQLT-YSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ L+DM + G ++ L + + M K + + +++ +H + A +I + + L
Sbjct: 272 ACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFE--L 329
Query: 331 EP-DDVVYVGVLSACSHAGL 349
EP + YV + + ++AG+
Sbjct: 330 EPYNPGNYVMLSNIYANAGM 349
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/527 (37%), Positives = 300/527 (56%), Gaps = 1/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +IF I ++ LI + + + E+A ++ M V P+ F+ +
Sbjct: 298 GDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVL 357
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ACA + L+ G QIH K+G+E +LFV N+L++MY KC +E + IF + +
Sbjct: 358 QACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEV 417
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+ II + +G + L +F EM + + SVL AC + ++ H
Sbjct: 418 SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVT-FSSVLRACANTSSIKHAVQIHSL 476
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
+ ++ + IV SLID Y KCG + L +F + + ++++ +IS A+HG+ A
Sbjct: 477 IEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNA 536
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L +F M + ++ +DV +V +LS C GLVN+GL F+ M +++RI P+++HY C+V
Sbjct: 537 LELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVR 596
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG L +AL+ I +P + +VWR+LLS+ VH N+ +G AA+ + I H +
Sbjct: 597 LLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETT 656
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSNMYA A +VA R M + G+ + G S VE+ +V+ F HP I
Sbjct: 657 YVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRII 716
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
M+ + + EGY PDI+ VL DVDE+EK L HS++LA+A+ L G PIRI
Sbjct: 717 NAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRI 776
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR C DCHT K+IS I +REIIVRD RFH F++G CSC DYW
Sbjct: 777 MKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 180/388 (46%), Gaps = 12/388 (3%)
Query: 28 RLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFF--WNPFCASNLVATCALSHWGSMD 82
+L C L+ C + + VHA V++ G + FCA+ L+ A G +
Sbjct: 42 KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYA--KLGPLA 99
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + E F TL++G+ EFEEAL L+ + G E ++F + K
Sbjct: 100 TARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLV 159
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ A IH K+G + + FV +LI+ Y C V A +F + K +W+A
Sbjct: 160 TMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTA 219
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
+++ ++ N + L F +M ++P +L S L A L + LGK HG ++
Sbjct: 220 MVSCYSENDIPEYALNTFSKMRMTG-FKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT 278
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF 322
+ V +L+DMY KCG +E +F M+ + +S +IS A Q ++A +F
Sbjct: 279 LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMF 338
Query: 323 SEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFD-RMKLEYRIVPTVQHYGCVVDLMG 381
M+R + P++ GVL AC++ + G + +KL Y V + ++D+
Sbjct: 339 LRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGN--ALMDMYA 396
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLL 409
+ + +LE+ S+ N+V W +++
Sbjct: 397 KCRNMENSLEIFSSLQ-DANEVSWNTII 423
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 297/510 (58%), Gaps = 4/510 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+NT+I G ++ +AL M + GV +++T+ F L G Q+HG V
Sbjct: 212 WNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVL 271
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQ---MDQKSVASWSAIIAAHASNGLWSE 215
E D FV++SL++MY KC +E A+++F + + +WS ++A + NG E
Sbjct: 272 IAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEE 331
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L LF M E + L SV +AC ++G ++ G+ HG + + L+ + ++++
Sbjct: 332 ALDLFRRMLREGV-AADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIV 390
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
DMY KCG LE +F K ++ M+ A HGQG+ A+ +F M E + P+++
Sbjct: 391 DMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEI 450
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
VGVLSACSH GLV+EG L F +M+ EY IVP+++HY C+VDL GR+G+L +A I+
Sbjct: 451 TLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEE 510
Query: 396 MPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDV 455
I +VW++LLSA ++H + E ++A++ L Q+ YV+LSN+YA +W+D
Sbjct: 511 NNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDT 570
Query: 456 AKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYS 515
++R M + + + PG S + + V+ FV+ D SHP IY + ++ +LK GY+
Sbjct: 571 FELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYT 630
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
V+ DV+++++ LK HS+KLAIAF +I G+P+RI +NLR+C DCH K I
Sbjct: 631 SRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCHEAIKYI 690
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S+ REI+VRD RFH FKD +CSC D+W
Sbjct: 691 SLATGREIVVRDLYRFHHFKDASCSCEDFW 720
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 166/372 (44%), Gaps = 55/372 (14%)
Query: 92 DEPGAFD---------FNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKAC 141
D G FD + I G + + + + + EM G P+ F A+ + C
Sbjct: 63 DARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCC 122
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A + ++ G ++HG + + G D+ + N++++MY KC + E A +F M ++ SW+
Sbjct: 123 AGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWN 182
Query: 202 AIIAAHASNGLWSECLKLFGE--MNNEKCWRPEESILVS---VLSACTHLGAL------- 249
I A +G ++LF E + + W S L+ A +HL +
Sbjct: 183 IAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVF 242
Query: 250 ------------------DLGKCTHGSLIRNISAL--NVIVETSLIDMYVKCGCLEKGLC 289
DLG+ HG ++ I+AL + V +SL+DMY KCG LE
Sbjct: 243 NHYTYSTAFVLAGMLLLPDLGRQLHGRVL--IAALEGDAFVRSSLMDMYCKCGLLEAAAS 300
Query: 290 LF---RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F + +S M++G +G+ +EAL +F MLREG+ D V +AC++
Sbjct: 301 VFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACAN 360
Query: 347 AGLVNEGLL---CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
G+V +G C + KL Y++ + +VD+ + G L +A + +N
Sbjct: 361 VGMVEQGRQVHGCVE--KLWYKLDAPLA--SAIVDMYAKCGNLEDARSIFDR-ACTKNIA 415
Query: 404 VWRSLLSASKVH 415
VW S+L + H
Sbjct: 416 VWTSMLCSYASH 427
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 13/247 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQ---IDEPGAFDFNT 101
+++H VL + F S+L+ C L ++ A S+F + F ++T
Sbjct: 264 RQLHGRVLIAALEGDAFVRSSLMDMYCKCGL-----LEAAASVFDHWSPLTRDMNFAWST 318
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
++ G+V+ EEAL L+ M GV D FT ++ ACA + +++G Q+HG V K+
Sbjct: 319 MVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 162 FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFG 221
++ D + +++++MY KC +E A +IF + K++A W++++ ++AS+G ++LF
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFE 438
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVK 280
M EK P E LV VLSAC+H+G + G+ + + I + ++D+Y +
Sbjct: 439 RMTAEKM-TPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGR 497
Query: 281 CGCLEKG 287
G L+K
Sbjct: 498 SGLLDKA 504
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 93/191 (48%), Gaps = 6/191 (3%)
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
S++ + + + A +F + ++ W+ I+ A G +++ ++ F EM E
Sbjct: 50 SVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEAT 109
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P +L +V+ C +G ++ GK HG ++RN L+V++ +++DMY KCG E+ +
Sbjct: 110 PNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRV 169
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-LREGLEPDDVVYVGVLSACSHAGL 349
F MA++ +++++ I G ++ +F E LR D + ++S +G
Sbjct: 170 FGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLR-----DTTSWNTIISGLMRSGH 224
Query: 350 VNEGLLCFDRM 360
+ L RM
Sbjct: 225 AADALSHLRRM 235
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/560 (34%), Positives = 305/560 (54%), Gaps = 40/560 (7%)
Query: 79 GSMDYACSIFRQIDEPGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPA 136
G ++ A S+F ++D G FD +N +I G+V+ +A L+ M V D FTF +
Sbjct: 246 GDVNAARSVFEEVD--GKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTS 303
Query: 137 LFKACAKLQALKEGMQIHGHVFKV--GF--ECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
+ ACA G +HG + ++ F E L V N+L+ +Y K K+ A IF M
Sbjct: 304 VLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTM 363
Query: 193 DQKSVASWSAI-------------------------------IAAHASNGLWSECLKLFG 221
+ K V SW+ I ++ + GL + LKLF
Sbjct: 364 NLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423
Query: 222 EMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+M E +P + ++AC LGAL G+ H L++ + +L+ MY KC
Sbjct: 424 QMRAEDV-KPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKC 482
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G + +F +M + ++++ MIS L HG G+EAL +F +M+ EG++PD + ++ +L
Sbjct: 483 GAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTIL 542
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+AC+HAGLV+EG F+ MK ++ I P HY ++DL+GR+G +GEA +LI++MP +
Sbjct: 543 TACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPT 602
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
+W ++LS + + ++E G AA LF++ H Y+LLSN Y+ A RW D A++R
Sbjct: 603 PSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKL 662
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M +G+ + PG S +EV K++ F+ D HP +Y+ + + +++ GY PD V
Sbjct: 663 MRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFV 722
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L D++ EK L HS+KLA+ F L+ L G+ + + +NLR+C DCHT +S R
Sbjct: 723 LHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGR 782
Query: 582 EIIVRDRKRFHRFKDGTCSC 601
EI+VRD +RFH FKDG CSC
Sbjct: 783 EIVVRDVRRFHHFKDGECSC 802
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 184/429 (42%), Gaps = 83/429 (19%)
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLY 119
P A++LVA A + G + A + F + P D N ++ F + A+ ++
Sbjct: 92 PSPATSLVAAQAAA--GRLRDAAAFFDAV-PPARRDTVLHNAMMSAFARASLAAPAVSVF 148
Query: 120 NEMFERG-VEPDNFTFPALFKACAKLQALKEG--MQIHGHVFKVGFECDLFVQNSLINMY 176
+ + G + PD+++F AL A ++ L Q+H V K G L V N+LI +Y
Sbjct: 149 HALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY 208
Query: 177 GKCEK----------------------------------VEFASAIFKQMDQKSVASWSA 202
KC+ V A ++F+++D K W+A
Sbjct: 209 MKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNA 268
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRP-EESILVSVLSACTHLGALDLGKCTHGSLIR 261
+I+ + +G+ ++ +LF M +EK P +E SVLSAC + G GK HG +IR
Sbjct: 269 MISGYVQSGMCADAFELFRRMVSEKV--PLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 326
Query: 262 -----------------------------------NISALNVIVETSLIDMYVKCGCLEK 286
++ +V+ +++ Y+ GCL+K
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 386
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+ +F++M K L++ VM+SG G ++AL +F++M E ++P D Y G ++AC
Sbjct: 387 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGE 446
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
G + G + ++ + ++ + + G + +A + MP + V W
Sbjct: 447 LGALKHGRQLHAHL-VQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSWN 504
Query: 407 SLLSASKVH 415
+++SA H
Sbjct: 505 AMISALGQH 513
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/541 (37%), Positives = 311/541 (57%), Gaps = 12/541 (2%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
++N++ L G +D A IF ++ E + T+I G+ + + A L+ M E
Sbjct: 174 ASTNMIG--GLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPE 231
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ E + + +++ +E F+V + N++I G+ ++
Sbjct: 232 K-TEVSWTSMLLGYTLSGRIEDAEE-------FFEVMPMKPVIACNAMIVALGEVGEIVK 283
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F QM+ + A+W +I A+ G E L+LF +M + RP L+S+LS C
Sbjct: 284 ARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGV-RPSFPSLISILSVCA 342
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
L +L G+ H L+R +V V + L+ MYVKCG L K +F K + ++
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNS 402
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
+ISG A HG G+EAL +F EM G P+ V + +L+ACS+ G + EGL F+ M+ ++
Sbjct: 403 IISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKF 462
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA 424
+ PTV+HY C VD++GRAG + +A+ELI SM I+ + VW +LL A K H L++ E+A
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVA 522
Query: 425 AKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYK 484
AK LF+I + Y+LLS++ A +W DVA++R M +K +++ PG S +EV +KV+
Sbjct: 523 AKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHM 582
Query: 485 FVSQD-RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
F R+HP I M+ + + L+ GYSPD S VL DVDE+EK + L HS++LA+
Sbjct: 583 FTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAV 642
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
A+ L+ L +G PIR+ +NLR+C DCH KLIS + EREII+RD RFH F +G CSCRD
Sbjct: 643 AYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRD 702
Query: 604 Y 604
Y
Sbjct: 703 Y 703
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 140/297 (47%), Gaps = 54/297 (18%)
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVE---FE-EALFL 118
P A N + AL G + A +F Q+++ N RG +K E FE EAL L
Sbjct: 264 PVIACNAM-IVALGEVGEIVKARRVFDQMEDRD----NATWRGMIKAYERKGFELEALEL 318
Query: 119 YNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK 178
+ +M +GV P + ++ CA L +L+ G Q+H H+ + F+ D++V + L+ MY K
Sbjct: 319 FAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVK 378
Query: 179 CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS 238
C ++ A +F + K + W++II+ +AS+GL E LK+F EM P + L++
Sbjct: 379 CGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTM-PNKVTLIA 437
Query: 239 VLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKC 298
+L+AC++ G LE+GL +F M K
Sbjct: 438 ILTACSYGGK-----------------------------------LEEGLEIFESMESKF 462
Query: 299 QLT-----YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC-SHAGL 349
+T YS + L G+ +A+ + + M ++PD V+ +L AC +H+ L
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGKVDKAMELINSMT---IKPDATVWGALLGACKTHSRL 516
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 122/272 (44%), Gaps = 28/272 (10%)
Query: 168 VQNSL-INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
V NS I+ + ++ A F + K++ SW++I++ + +NGL E ++F EM
Sbjct: 18 VNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEM--- 74
Query: 227 KCWRPEESILV--SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
PE +I+ ++S ++ + ++ + NV+ T+++ YV+ G +
Sbjct: 75 ----PERNIVSWNGLVSGYIKNRMIEEAR----NVFEIMPERNVVSWTAMVKGYVQEGMV 126
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+ LF M ++ +++++VM GL G+ +A ++ M + D V ++
Sbjct: 127 VEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGK----DVVASTNMIGGL 182
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
G V+E FD M+ I T G G+ + A +L + MP ++ +V
Sbjct: 183 CREGRVDEAREIFDEMRERNVITWTTMITG-----YGQNKRVDVARKLFEVMP-EKTEVS 236
Query: 405 WRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
W S+L + +E A+ F++ P
Sbjct: 237 WTSMLLGYTLSGRIE----DAEEFFEVMPMKP 264
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++ T +L+ ++VHAH+++ F + + AS L+ G + A +F +
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYV--KCGELVKAKLVFDRFPSK 395
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N++I G+ EEAL +++EM G P+ T A+ AC+ L+EG++I
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIF 455
Query: 155 GHVFKVGFECDLFVQ--NSLINMYGKCEKVEFASAIFKQMDQKSVAS-WSAIIAA 206
+ F V+ + ++M G+ KV+ A + M K A+ W A++ A
Sbjct: 456 -ESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGA 509
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 326/590 (55%), Gaps = 24/590 (4%)
Query: 27 LRLKEQECLTILKTCKNL-----EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW--- 78
L+ + +T+LK+C +L E+ K++H H + GF ++LV +L H
Sbjct: 79 LQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGF------GTDLVVQNSLIHMYAK 132
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
GS +A +F +++ + ++I+ + + EA LY +M G+ PD + + A
Sbjct: 133 CGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 192
Query: 138 FKACAKLQALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
C ++EG IH K+G N+L+ MYG+ ++ A +F + K
Sbjct: 193 LAVCP---TIREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYK 246
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+AS++ +IA A S+ + L+ EM + P SVL AC+ LGAL GK
Sbjct: 247 DLASYNNMIAVFAKYDDGSKAISLYIEMEG-RNLEPNLWTFTSVLDACSKLGALTEGKEI 305
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + +V T+L++MY KCG + +F K T++ ++S + GQ
Sbjct: 306 HKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQS 365
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ L + M EG+ PDDV + + +ACSH+GL +EGLL F M+ ++ IVP HY C
Sbjct: 366 QYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTC 425
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++DL+GR G L EA EL+++MP + V W LLSA KV+ +L+IG A K + ++N
Sbjct: 426 MIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPD 485
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
Y+L+ NMYA+A +W DVA+++ + +GL + PG S++E R++++FV D +HP
Sbjct: 486 SGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLN 545
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
I + ++ QL GY PD +VL DV+E+ K E L HS+++A+ L+ G+
Sbjct: 546 QEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGAT 605
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ I +NLR+C DCH++ KL+S + R+++VRD RFH F+ G+CSC DYW
Sbjct: 606 LHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 115/229 (50%), Gaps = 8/229 (3%)
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
E + F+ N L+ YG+C+ ++ A A F ++ +K+ S++ ++ A+ N L + L+LF +
Sbjct: 14 EKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKK 73
Query: 223 MNNEKCWRPEESILVSVLSACTHLGA--LDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
NE+ + ++ V+VL +C HLG L+ GK H I +++V+ SLI MY K
Sbjct: 74 SINEEL-QQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAK 132
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + +F M K ++Y+ MI + EA ++ +ML EG+ PD Y
Sbjct: 133 CGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 192
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
L+ C + EG ++ R P + +V + GR G + A
Sbjct: 193 LAVCP---TIREGEAIHVKLGNHERRTPVCSN--ALVGMYGRFGRIASA 236
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 315/545 (57%), Gaps = 6/545 (1%)
Query: 65 CASN-LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
C+ N LVA S G + A ++F ++ F ++ ++ V+ + AL +Y M
Sbjct: 93 CSYNTLVAALGRSPRG-LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRML 151
Query: 124 ER--GVEPDN-FTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
G DN FT + A + + G ++H HV + G + D V ++L +MY K
Sbjct: 152 REPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFG 211
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
+++ A ++F +M + V SW+A++ + G E +LF M P E VL
Sbjct: 212 RLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGIL-PNEFTYAGVL 270
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
AC + LGK HG + ++ + + ++L+ MY K G + + +FR M +
Sbjct: 271 RACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLV 330
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
+++ MISG A +GQ EAL F +L G PD V +VGVLSAC+HAGLV++GL F +
Sbjct: 331 SWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSI 390
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
K +Y I T HY CV+DL+ R+G+ A ++I +MP++ N +W SLL ++H N+ +
Sbjct: 391 KDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRL 450
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
AA+ LF+I +P+ YV L+N+YA + +V +R M +G+ + P S +EV
Sbjct: 451 AWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGT 510
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQK 540
+V+ F+ D+SHP + IY ++ ++ +++ EGY D VL DV++++K++ + HS++
Sbjct: 511 RVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSER 570
Query: 541 LAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCS 600
LA+AF +I +GSPI++ +NLR+C DCHT KLIS I +REIIVRD RFH FK+G+CS
Sbjct: 571 LAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCS 630
Query: 601 CRDYW 605
CRDYW
Sbjct: 631 CRDYW 635
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/562 (37%), Positives = 317/562 (56%), Gaps = 8/562 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K++HA LK G + F + A S G A ++F ++ +N + V
Sbjct: 129 KQLHALALKGGNILDVFVGCS--AFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAV 186
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ +A+ + + EP+ TF A ACA + +L+ G Q+HG + + + D+
Sbjct: 187 QDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVS 246
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
V N LI+ YGKC + + +F ++ +++V SW +++AA N +F +
Sbjct: 247 VFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARK 306
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
E P + ++ SVLSAC LG L+LG+ H ++ N+ V ++L+D+Y KCG +E
Sbjct: 307 EV--EPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIE 364
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE--GLEPDDVVYVGVLSA 343
+FR M ++ +T++ MI G A G ALS+F EM G+ V V VLSA
Sbjct: 365 YAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSA 424
Query: 344 CSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDV 403
CS AG V GL F+ M+ Y I P +HY CVVDL+GR+G++ A E I+ MPI
Sbjct: 425 CSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTIS 484
Query: 404 VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMA 463
VW +LL A K+H ++G+IAA+ LF+++ ++V+ SNM A A RW + +R EM
Sbjct: 485 VWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMR 544
Query: 464 SKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR 523
G+ ++ G+S V V +V+ F ++D H I M+ ++ ++K GY PD + L
Sbjct: 545 DIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLF 604
Query: 524 DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREI 583
D++E+EK + HS+K+A+AF LI L +G PIRI +NLR+C DCH+ K IS I REI
Sbjct: 605 DLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREI 664
Query: 584 IVRDRKRFHRFKDGTCSCRDYW 605
IVRD RFHRFKDG CSC+DYW
Sbjct: 665 IVRDNNRFHRFKDGWCSCKDYW 686
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 173/372 (46%), Gaps = 19/372 (5%)
Query: 48 KKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYACS---IFRQIDEPGAFDFNTLI 103
+ VHAH+L+ P F ++LV + + +D S + + + +LI
Sbjct: 27 RAVHAHILRTHDTPLPSFLCNHLV-----NMYSKLDLPNSAQLVLSLTNPRTVVTWTSLI 81
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G V F AL ++ M V P++FTFP +FKA A L G Q+H K G
Sbjct: 82 SGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNI 141
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+FV S +MY K A +F +M +++A+W+A ++ +G CL
Sbjct: 142 LDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDG---RCLDAIAAF 198
Query: 224 NNEKC--WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
C P + L+AC + +L+LG+ HG ++R+ +V V LID Y KC
Sbjct: 199 KKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKC 258
Query: 282 GCLEKGLCLFRMMAD--KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
G + +F + + +++ +++ L + + + A +F + +E +EP D +
Sbjct: 259 GDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISS 317
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
VLSAC+ G + G + L+ + + +VDL G+ G + A ++ + MP +
Sbjct: 318 VLSACAELGGLELG-RSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMP-E 375
Query: 400 QNDVVWRSLLSA 411
+N V W +++
Sbjct: 376 RNLVTWNAMIGG 387
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 18/309 (5%)
Query: 150 GMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G +H H+ + F+ N L+NMY K + A + + ++V +W+++I+
Sbjct: 26 GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
N ++ L F M E C P + V A L GK H ++ + L+V
Sbjct: 86 HNRRFTSALLHFSNMRRE-CVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V S DMY K G + +F M + T++ +S G+ +A++ F + L
Sbjct: 145 FVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCV 204
Query: 329 GLEPDDVVYVGVLSACS-----HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EP+ + + L+AC+ G G + R + + V + ++D G+
Sbjct: 205 DGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYRED------VSVFNGLIDFYGKC 258
Query: 384 G-MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSH-HPSDYVL 441
G ++ L + ++N V W SLL+A +H E A Q P+D+++
Sbjct: 259 GDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHE---EERACMVFLQARKEVEPTDFMI 315
Query: 442 LSNMYARAQ 450
S + A A+
Sbjct: 316 SSVLSACAE 324
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/614 (35%), Positives = 330/614 (53%), Gaps = 47/614 (7%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+RL + L C L K++HA V++ +P+ AS LV A S G
Sbjct: 285 GVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKS--GCFK 342
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + + + LI GF++ F E++ L+N+M + D F L C
Sbjct: 343 EAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC 402
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L G Q+H K G + V NSLI+MY KC+ ++ A AIF+ M++K + SW++
Sbjct: 403 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTS 462
Query: 203 IIAAHASNG------------------LWS-------------ECLKLFGEMNNEKCWRP 231
+I A++ G W+ + L+++ M +E+ RP
Sbjct: 463 MITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 522
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ V++ C LGA LG G ++ ++ V ++I MY KCG + + +F
Sbjct: 523 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 582
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ K ++++ MI+G + HG GK+A+ IF ++L+ G +PD + YV VLS CSH+GLV
Sbjct: 583 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 642
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG FD MK + I P ++H+ C+VDL+GRAG L EA +LI MP++ VW +LLSA
Sbjct: 643 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 702
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
K+H N E+ E+AAK++F+++S Y+L++ +YA A + D A+IR M KG+ ++P
Sbjct: 703 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 762
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G+S +EV KV+ F + D SHP I + + ++ ++ GY V D R
Sbjct: 763 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY----------VRTDSTR 812
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
+ HS+KLA+AF L+ L PI I +NLR+C DCHT KLIS + RE ++RD RF
Sbjct: 813 SEIH-HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 871
Query: 592 HRFKDGTCSCRDYW 605
H F G+CSC DYW
Sbjct: 872 HHFNGGSCSCGDYW 885
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 66/400 (16%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER------------- 125
G++D A +F +I EP F N+++ G+VK + AL L++ M ER
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266
Query: 126 ------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
GV D+ T+ + ACA+L +L+ G Q+H V + D +
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V ++L+ +Y K + A +F + ++ +W+ +I+ G ++E ++LF +M E
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE- 385
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++ L +++S C L LG+ H +++ V+V SLI MY KC L+
Sbjct: 386 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 445
Query: 288 LCLFRM-------------------------------MADKCQLTYSVMISGLAMHGQGK 316
+FR M++K +T++ M+ HG +
Sbjct: 446 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 505
Query: 317 EALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ L ++ ML E + PD V YV + C+ G G R ++ ++
Sbjct: 506 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR-TVKVGLIIDTSVANA 564
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V+ + + G + EA ++ + + ++ V W ++++ H
Sbjct: 565 VITMYSKCGRILEARKVFDFLNV-KDIVSWNAMITGYSQH 603
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 33/298 (11%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPAL 137
G + A +F ++ +NTL+ G+ + ++ +L + M G P+ FT
Sbjct: 105 GRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACA 164
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS----------- 186
K+C L +Q+ V K + D V +L++M+ +C V+ AS
Sbjct: 165 MKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTM 224
Query: 187 --------------------AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+F M ++ V SW+ +++A + +G E L + +M +
Sbjct: 225 FCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS- 283
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
K R + + S L+AC L +L GK H +IRN+ ++ V ++L+++Y K GC ++
Sbjct: 284 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 343
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F + D+ + ++V+ISG +G E++ +F++M E + D ++S C
Sbjct: 344 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++ N ++N Y K ++ A +F +M + VASW+ +++ + + + L+ F M+
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
P L + +C LG L + + S + V +L+DM+V+CG +
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209
Query: 285 E-------------------------------KGLCLFRMMADKCQLTYSVMISGLAMHG 313
+ L LF M ++ +++++M+S L+ G
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+ +EAL + +M +G+ D Y L+AC+ + G ++ R +P + Y
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV---IRNLPHIDPY 326
Query: 374 --GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+V+L ++G EA + S+ +N+V W L+S
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLH-DRNNVAWTVLISG 365
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/592 (35%), Positives = 329/592 (55%), Gaps = 13/592 (2%)
Query: 25 LNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWG-FFWNPFCASNLVATCALSHWGS 80
L +R + L C LE +++HA+V+K N F AS LV A
Sbjct: 113 LGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE--Q 170
Query: 81 MDYACSIFRQIDEPGA--FDFNTLIRGFVKEVEFEEALFLYNEM-FERGVEPDNFTFPAL 137
+ A +F + + G +N +I G+ + EEAL L+ M E G P T ++
Sbjct: 171 VGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASV 230
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
ACA+ +A +HG+V K G + FVQN+L++MY + K + A IF +D V
Sbjct: 231 LPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDV 290
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEMNN--EKCWRPEESILVSVLSACTHLGALDLGKCT 255
SW+ +I G ++ +L EM E P L+++L C L A GK
Sbjct: 291 VSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEI 350
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ +V V ++L+DMY KCGCL +F + + +T++V+I MHG G
Sbjct: 351 HGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLG 410
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
EA +F M G P++V ++ L+ACSH+G+V+ GL F M+ ++ + PT
Sbjct: 411 GEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILA 470
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
CVVD++GRAG L EA ++ SM + V W ++L A ++H N+ +GEIA + L ++
Sbjct: 471 CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEP 530
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
S YVLL N+Y+ A +W A++R+ M +G+ + PG S +EV +++F++ + +HP
Sbjct: 531 EEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHP 590
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
A + ++ + + ++ GY+PD S VL D+D+ +K L+ HS+KLAIAF L+ + G
Sbjct: 591 ASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPG 650
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ IR+A+NLR+CNDCH K +S + REI++RD +RFH F++G CSC DYW
Sbjct: 651 ATIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 11/331 (3%)
Query: 94 PGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
PG D +NT++ V+ F+EA+ +M GV PD TF + AC++L+ L G
Sbjct: 79 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 138
Query: 151 MQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ--KSVASWSAIIAAH 207
++H +V K + FV ++L++MY E+V A +F + K + W+A+I +
Sbjct: 139 REMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGY 198
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A G+ E L+LF M E + P E+ + SVL AC A + HG +++ A N
Sbjct: 199 AQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGN 258
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM-- 325
V+ +L+DMY + G + +F M+ ++++ +I+G + G +A + EM
Sbjct: 259 RFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQ 318
Query: 326 LRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
L E G+ P+ + + +L C+ G + + + V +VD+ + G
Sbjct: 319 LEEGGVVPNAITLMTLLPGCAILAAPARGKEIHG-YAVRHALDTDVAVGSALVDMYAKCG 377
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
L + + +P ++N + W L+ A +H
Sbjct: 378 CLALSRAVFDRLP-RRNTITWNVLIMAYGMH 407
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 303/527 (57%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G M A +F ++ E +NT+I G V +F EA L+ M+E + +FTF +
Sbjct: 24 GMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMI 83
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+A A L+ + G Q+H K+G D+FV +LI+MY KC +E A +F++M +K+
Sbjct: 84 RASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTV 143
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
W+ IIA +A +G E L ++ EM + + + ++ C L +++ K H +
Sbjct: 144 GWNTIIAGYALHGYSEEALDMYYEMRDSGV-KMDHFTFSMIVRICARLASVEHAKQAHAA 202
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
LIR+ +++ T+L+D Y K G +E +F MA K ++++ +I G HG+G EA
Sbjct: 203 LIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEA 262
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +M++E + P+ + ++ VLSACSH+GL G F M + RI P HY C+++
Sbjct: 263 VELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIE 322
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
LMGR G+L EAL LI+ P + +W +LL+A +V+ N E+G+ AA+ L+ + ++
Sbjct: 323 LMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGMEPDKLNN 382
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y++L N+Y A + A + + KGL P S +EV R+ + F+S D HP I
Sbjct: 383 YIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGDNRHPQRKEI 442
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y+ + ++ ++ GY P+ +L DVDE E+R RL HS+KLAIAF LI +P++I
Sbjct: 443 YQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLY-HSEKLAIAFGLISTPYWAPLQI 501
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ R+C DCH KLI+ + REI++RD RFH FK G CSC DYW
Sbjct: 502 VQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKHGHCSCEDYW 548
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 161/313 (51%), Gaps = 16/313 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNTLI 103
+++HA LK G ++ +CAL S GS++ A +F ++ E +NT+I
Sbjct: 96 RQLHACTLKMGI------GDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTII 149
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ EEAL +Y EM + GV+ D+FTF + + CA+L +++ Q H + + GF
Sbjct: 150 AGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFG 209
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+ +L++ Y K ++E A +F +M K+V SW+A+I + ++G SE ++LF +M
Sbjct: 210 SDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQM 269
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR-NISALNVIVETSLIDMYVKCG 282
E+ P ++VLSAC+H G + G S+ R N + +I++ + G
Sbjct: 270 IQERM-NPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREG 328
Query: 283 CLEKGLCLFRMMADKCQLT-YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV-VYVGV 340
L++ L L R K ++ +++ ++ + L F+ G+EPD + Y+ +
Sbjct: 329 LLDEALALIRGAPFKPTANMWAALLTACRVNENFE--LGKFAAEKLYGMEPDKLNNYIVL 386
Query: 341 LSACSHAGLVNEG 353
L+ + AG + E
Sbjct: 387 LNIYNSAGNLKEA 399
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 17/262 (6%)
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
GFE D +++N ++ M+ KC + A +F +M ++++ SW+ II+ G + E +LF
Sbjct: 5 GFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLF 64
Query: 221 GEMNNEKCWRPEESILVSVL-SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
M E + S +V+ A L + +G+ H ++ ++ V +LIDMY
Sbjct: 65 LNMWEE--FSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYS 122
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG +E +F M +K + ++ +I+G A+HG +EAL ++ EM G++ D +
Sbjct: 123 KCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSM 182
Query: 340 VLSACS------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++ C+ HA + L+ R IV +VD + G + +A +
Sbjct: 183 IVRICARLASVEHAKQAHAALI---RHGFGSDIVANT----ALVDFYSKWGRIEDARHVF 235
Query: 394 QSMPIQQNDVVWRSLLSASKVH 415
M +N + W +L+ H
Sbjct: 236 DKMA-SKNVISWNALIGGYGNH 256
>gi|115470991|ref|NP_001059094.1| Os07g0191500 [Oryza sativa Japonica Group]
gi|34394559|dbj|BAC83863.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510108|dbj|BAD30876.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610630|dbj|BAF21008.1| Os07g0191500 [Oryza sativa Japonica Group]
Length = 550
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/490 (40%), Positives = 294/490 (60%), Gaps = 13/490 (2%)
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASA 187
P + + PA+ A A L AL EG Q+H K+G V NSL+++Y C A
Sbjct: 61 PPHVSLPAVLSAAAFLSALPEGRQLHALAAKLGLAPSHTVVANSLLHLYSSCGLPGAALD 120
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F+++ +S+ SW+ + A NG L LF EM + P+ + SVL AC G
Sbjct: 121 LFRRIPDRSLVSWNTAVDALVGNGDHLAALDLFREMQRDTELAPDAYTVQSVLGACAGAG 180
Query: 248 ALDLGKCTHGSLIRNIS--------ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
AL LG H L+R + + ++++ SL+D+Y KCG LE +F M +
Sbjct: 181 ALSLGVYAHALLLRELGGDGDGEAVSRDMLINNSLVDLYGKCGALELAQQVFDRMPARDL 240
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNEGLLCFD 358
+++VMI LA HG+ E++ +F M + E + P+ + +V VLSAC+H GLV EG F
Sbjct: 241 ASWNVMILTLANHGRVCESVELFDRMTQVEKMAPNAITFVAVLSACNHGGLVEEGRRYFA 300
Query: 359 RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHN 417
M +YRI P ++HYGC+VDL+ RAG + EAL+++ M + + ++WRSLL A K +
Sbjct: 301 MMVDQYRIKPRIEHYGCMVDLLARAGFIEEALDIVAGMNCRPDAIIWRSLLDACCKKNAG 360
Query: 418 LEIGEIAAKNLFQINSHHPSD-YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLV 476
LE+ E AK ++ S YVLLS +YA AQRW DV +R M +G+ + PGFS +
Sbjct: 361 LELTEAMAKLALEVPDDAVSGVYVLLSRVYASAQRWNDVGMVRRLMVEEGVKKEPGFSSI 420
Query: 477 EVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRERLK 535
E+ V++FV+ D SHP + IYE + +++ +L GY PD+S+ L ++ K L+
Sbjct: 421 EMDGLVHQFVAGDTSHPQSEAIYEKLDEIQLKLTSAGYKPDLSEAPLVASIDNAKGAALR 480
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS++LAI+F L++ + G+PIRI +NLR+C DCHT +KLIS +Y EIIVRDR RFH FK
Sbjct: 481 LHSERLAISFGLLNATPGAPIRILKNLRVCKDCHTISKLISKLYGVEIIVRDRIRFHHFK 540
Query: 596 DGTCSCRDYW 605
DG+CSC+DYW
Sbjct: 541 DGSCSCKDYW 550
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 162/373 (43%), Gaps = 76/373 (20%)
Query: 3 RTSVLHQSLLL-----TQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKW 57
R + H++LLL + P PP P ++L L+ L E +++HA K
Sbjct: 39 RADLAHRALLLFRSLQSTPSPPP--PHVSL----PAVLSAAAFLSALPEGRQLHALAAKL 92
Query: 58 GFFWNPFCASN----LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFE 113
G + +N L ++C L A +FR+I + +NT + V +
Sbjct: 93 GLAPSHTVVANSLLHLYSSCGLP-----GAALDLFRRIPDRSLVSWNTAVDALVGNGDHL 147
Query: 114 EALFLYNEMFERGVE--PDNFTFPALFKACAKLQALKEGMQIHGHVFK-VGFEC------ 164
AL L+ EM +R E PD +T ++ ACA AL G+ H + + +G +
Sbjct: 148 AALDLFREM-QRDTELAPDAYTVQSVLGACAGAGALSLGVYAHALLLRELGGDGDGEAVS 206
Query: 165 -DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
D+ + NSL+++YGKC +E A +F +M + +ASW+ +I A++G E ++LF M
Sbjct: 207 RDMLINNSLVDLYGKCGALELAQQVFDRMPARDLASWNVMILTLANHGRVCESVELFDRM 266
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
+ P V+VLSAC H G
Sbjct: 267 TQVEKMAPNAITFVAVLSACNH-----------------------------------GGL 291
Query: 284 LEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+E+G F MM D+ ++ Y M+ LA G +EAL I + M PD +++
Sbjct: 292 VEEGRRYFAMMVDQYRIKPRIEHYGCMVDLLARAGFIEEALDIVAGM---NCRPDAIIWR 348
Query: 339 GVLSAC--SHAGL 349
+L AC +AGL
Sbjct: 349 SLLDACCKKNAGL 361
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/590 (34%), Positives = 325/590 (55%), Gaps = 24/590 (4%)
Query: 27 LRLKEQECLTILKTCKNL-----EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW--- 78
L+ + +T+LK+C +L E+ K++H H + GF ++LV +L H
Sbjct: 25 LQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGF------GTDLVVQNSLIHMYAK 78
Query: 79 -GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPAL 137
GS +A +F +++ + ++I+ + + EA LY +M G+ PD + + A
Sbjct: 79 CGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAA 138
Query: 138 FKACAKLQALKEGMQIHGHVFKVGF--ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
C ++EG IH K+G N+L+ MYG+ ++ A +F + K
Sbjct: 139 LAVCP---TIREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYK 192
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+AS++ +IA A S+ + L+ EM P SVL AC+ LGAL GK
Sbjct: 193 DLASYNNMIAVFAKYDDGSKAISLYIEMEGRNL-EPNLWTYTSVLDACSKLGALTEGKEI 251
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H + +V T+L++MY KCG + +F K T++ ++S + GQ
Sbjct: 252 HKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSAYSQPGQS 311
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ L + M EG+ PDDV + + +ACSH+GL +EGLL F M+ ++ IVP HY C
Sbjct: 312 QYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTC 371
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
++DL+GR G L EA EL+++MP + V W LLSA KV+ +L+IG A K + ++N
Sbjct: 372 MIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPD 431
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
Y+L+ NMYA+A +W DVA+++ + +GL + PG S++E R++++FV D +HP
Sbjct: 432 SGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLN 491
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
I + ++ QL GY PD +VL DV+E+ K E L HS+++A+ L+ G+
Sbjct: 492 QEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGAT 551
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+ I +NLR+C DCH++ KL+S + R+++VRD RFH F+ G+CSC DYW
Sbjct: 552 LHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 601
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/531 (35%), Positives = 312/531 (58%), Gaps = 16/531 (3%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A ++F ++ + + +I G+ + E A L+ M ER + ++ A+
Sbjct: 188 GRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAML 243
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ +++ ++ F E + N+++ +G+ V+ A +F++M ++
Sbjct: 244 VGYIQAGHVEDAAEL----FNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDG 299
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWR---PEESILVSVLSACTHLGALDLGKCT 255
+WSA+I A+ N E L F EM WR P ++S+L+ C L LD G+
Sbjct: 300 TWSAMIKAYEQNEFLMEALSTFREM----LWRGVRPNYPSVISILTVCAALAVLDYGREV 355
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H +++R ++V ++LI MY+KCG L+K +F K + ++ MI+G A HG G
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
++AL IF +M G+ PD + Y+G L+ACS+ G V EG F+ M + I P +HY C
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSC 475
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VDL+GR+G++ EA +LI++MP++ + V+W +L+ A ++H N EI E+AAK L ++ +
Sbjct: 476 MVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGN 535
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQD-RSHPA 494
YVLLS++Y RW D +K+R ++S+ LN+SPG S +E ++V+ F S D +HP
Sbjct: 536 AGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPE 595
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
I ++ +++ L GYS D S VL D+DE++K L+ HS++ A+A+ L+ + +G
Sbjct: 596 HAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGM 655
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+C DCH+ KLI+ I REI++RD RFH FKDG CSCRDYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 130/287 (45%), Gaps = 21/287 (7%)
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
L++ +L D A ++ P F +L+RG+V+ +A+ L+ +M ER
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER--- 141
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
++ ++ L + E ++ F + D+ ++++ Y + ++ A A+
Sbjct: 142 -NHVSYTVLLGGLLDAGRVNEARRL----FDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196
Query: 189 FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHL 246
F +M +++V SW+A+I+ +A NG + KLF M NE W ++LV + A
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSW---TAMLVGYIQAGHVE 253
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
A +L + +A+ V + + G ++ +F M ++ T+S MI
Sbjct: 254 DAAELFNAMPEHPVAACNAMMV--------GFGQRGMVDAAKTVFEKMRERDDGTWSAMI 305
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ EALS F EML G+ P+ + +L+ C+ +++ G
Sbjct: 306 KAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYG 352
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 121/272 (44%), Gaps = 31/272 (11%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW 229
N+ I + +E A A F+ M ++ AS++A++A + N L L LF M +
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSR--- 77
Query: 230 RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL----NVIVETSLIDMYVKCGCLE 285
+ S + L L + T ++++ +V+ TSL+ YV+ G L
Sbjct: 78 --------DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLA 129
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ LF+ M ++ ++Y+V++ GL G+ EA +F EM + D V + +LS
Sbjct: 130 DAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM----PDRDVVAWTAMLSGYC 185
Query: 346 HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVW 405
AG + E FD M V + ++ + G + A +L + MP ++N+V W
Sbjct: 186 QAGRITEARALFDEMPKR-----NVVSWTAMISGYAQNGEVNLARKLFEVMP-ERNEVSW 239
Query: 406 RSLLSASKVHHNLEIGEIA-AKNLFQINSHHP 436
++L ++ G + A LF HP
Sbjct: 240 TAMLVGY-----IQAGHVEDAAELFNAMPEHP 266
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+R ++IL C L ++VHA +L+ F + F S L+ G++D
Sbjct: 328 GVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITM--YIKCGNLD 385
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + +N++I G+ + E+AL ++++M G+ PD T+ AC+
Sbjct: 386 KAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACS 445
Query: 143 KLQALKEGMQIHGHV-----FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKS 196
+KEG +I + + G E + ++++ G+ VE A + K M +
Sbjct: 446 YTGKVKEGREIFNSMTVNSSIRPGAEH----YSCMVDLLGRSGLVEEAFDLIKNMPVEPD 501
Query: 197 VASWSAIIAA 206
W A++ A
Sbjct: 502 AVIWGALMGA 511
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/617 (32%), Positives = 342/617 (55%), Gaps = 41/617 (6%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
N+R + L++ K C +L KK+H +++GF + + L+ + ++
Sbjct: 72 NVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKF--VN 129
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + + ++ +V + + L+ EM G+ ++ T ++ ACA
Sbjct: 130 GARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA 189
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+K G ++HG + + E +++V ++L+NMY ++ A +F M + + SW+
Sbjct: 190 DY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNV 247
Query: 203 IIAAHASNGLWSECLKLFGEMN------NEKCW--------------------------- 229
++ A+ N + L LF +M N+ W
Sbjct: 248 MLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSG 307
Query: 230 -RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
+P +VS L CT+L +L GK HG + R+ +V + T+L+ +Y KCG LE
Sbjct: 308 IKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSR 367
Query: 289 CLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAG 348
+F M K + ++ MI +MHG+G E+L +F++ML G+EP+ V ++GVLS CSH+
Sbjct: 368 HVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQ 427
Query: 349 LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSL 408
L +EGLL F+ M E+ I P HY C+VD++ RAG L EA + I+ MPI+ W +L
Sbjct: 428 LADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGAL 487
Query: 409 LSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLN 468
L A +V+ N+E+G +AA LF+I + +YVLLSN+ A++W + ++IR M KGL
Sbjct: 488 LGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLA 547
Query: 469 QSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDED 528
++PG S V+V KVY FV+ D+S+ D IY + +++ +++ +GY P+ VL++VD++
Sbjct: 548 KTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQE 607
Query: 529 EKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDR 588
++ E L HS++LA+AF +++ S + +R+ +NLR+C DCH KLI+ I +IIVRD
Sbjct: 608 QREETLCSHSERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDS 667
Query: 589 KRFHRFKDGTCSCRDYW 605
RFH F+DG C+C D+W
Sbjct: 668 LRFHHFRDGYCTCNDFW 684
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 7/296 (2%)
Query: 63 PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM 122
P + L+ TC S G + A +F +I EP + LI G + ++A+ +Y+ +
Sbjct: 11 PCQSIKLIKTCLNS--GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTL 68
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
R V PD F ++ KACA L +IH + GF DL + N+LI+M+GKC+ V
Sbjct: 69 LSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFV 128
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
A +F M K V SW+++ + + G+ + + LF EM R + S+L A
Sbjct: 129 NGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGI-RANSLTVSSILPA 187
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C + LG+ HG ++RN NV V ++L++MY L++ +F M + +++
Sbjct: 188 CADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSW 245
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGL--VNEGLLC 356
+VM++ ++ + + L +F +M +EG++ + + +S C G + G+LC
Sbjct: 246 NVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILC 301
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 296/502 (58%), Gaps = 2/502 (0%)
Query: 86 SIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
++F ++ E +N +I + + ++EE+L L+ EM G + NF F + A L
Sbjct: 300 NLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLS 359
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
+L+ G Q+H + L V NSL++MY KCE + A IFK + Q+S SW+A+I+
Sbjct: 360 SLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALIS 419
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
+ GL LKLF +M R ++S +VL A +L LGK H +IR+ +
Sbjct: 420 GYVQKGLHGAGLKLFTKMRGANL-RADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNL 478
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
NV + L+DMY KCG ++ + +F M D+ ++++ +IS A +G G+ A+ F++M
Sbjct: 479 ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKM 538
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
++ GL+PD V +GVL ACSH G V +G F M Y I P +HY C++DL+GR G
Sbjct: 539 IQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGR 598
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSN 444
EA +L+ MP + ++++W S+L+A +++ N + E AA+ LF + + YV +SN
Sbjct: 599 FAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSN 658
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
+YA A +W +V ++ M +G+ + P +S VEV K++ F S D++HP D I + I++
Sbjct: 659 IYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINE 718
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ +++ EGY PD S V++D+DE K E LK HS++LA+AFALI +G PI + +NLR
Sbjct: 719 LTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRA 778
Query: 565 CNDCHTYTKLISVIYEREIIVR 586
C DCH KLIS I +R I +
Sbjct: 779 CRDCHAAIKLISKIVKRVITTQ 800
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 184/393 (46%), Gaps = 34/393 (8%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPF---CASNLVATCALSHWGSMDYACSIFR 89
T+L C + +VHA +K GF N F C L + C + +D AC +F
Sbjct: 146 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR---LDLACVLFE 202
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
+I + + FNTLI G+ K+ + EA+ L+ +M + G +P +FTF + KA L
Sbjct: 203 EILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFAL 262
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+HG GF D V N +++ Y K ++V +F +M + S++ +I++++
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQ 322
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ E L LF EM R ++LS +L +L +G+ H I + +
Sbjct: 323 AEQYEESLNLFREMQCMGFDR-RNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILH 381
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V SL+DMY KC ++ +F+ ++ + ++++ +ISG G L +F++M
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 330 LEPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L D + VL A + HA ++ G L V +VD
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNL------------ENVFSGSGLVD 489
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ + G + +A+++ + MP +N V W +L+SA
Sbjct: 490 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 521
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 172/401 (42%), Gaps = 46/401 (11%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
++V A ++K GF + C SN L G + A ++ ++ NT+I G+V
Sbjct: 29 RRVDARIIKTGFNTDT-CRSNFTVEDLLRR-GQVSAALKVYDEMPHKNTVSTNTMISGYV 86
Query: 108 KEVE-------------------------------FEEALFLYNEMFERGVEPDNFTFPA 136
K + F+EA L+ +M PD TF
Sbjct: 87 KMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTT 146
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQ--NSLINMYGKCEKVEFASAIFKQMDQ 194
L C Q+H K+GF+ +LF+ N L+ Y + +++ A +F+++
Sbjct: 147 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
K +++ +I + +GL++E + LF +M + +P + VL A L LG+
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKM-RQSGHKPSDFTFSGVLKAVVGLHDFALGQQ 265
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG + + + V ++ Y K + + LF M + ++Y+V+IS + Q
Sbjct: 266 LHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQ 325
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQ 371
+E+L++F EM G + + + +LS ++ + G R IV T +
Sbjct: 326 YEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVG-----RQVHCQAIVATADSIL 380
Query: 372 HYG-CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
H G +VD+ + M EA ELI Q++ V W +L+S
Sbjct: 381 HVGNSLVDMYAKCEMFDEA-ELIFKSLSQRSTVSWTALISG 420
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 44/268 (16%)
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
D A IF+ + + + LI G+V++ L L+ +M + D TF + KA
Sbjct: 397 DEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKAS 456
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
A +L G Q+H + + G ++F + L++MY KC ++ A +F++M ++ SW+
Sbjct: 457 AGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWN 516
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
A+I+A+A NG + F +M + +P+ ++ VL AC+H
Sbjct: 517 ALISAYADNGDGEAAIGAFTKM-IQSGLQPDSVSILGVLIACSH---------------- 559
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGK 316
CG +E+G F+ M+ +T Y+ M+ L +G+
Sbjct: 560 -------------------CGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 600
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSAC 344
EA + EM EPD++++ VL+AC
Sbjct: 601 EAEKLMDEM---PFEPDEIMWSSVLNAC 625
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
NLR + T+LK K++HA +++ G N F S LV A GS+
Sbjct: 441 NLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA--KCGSIK 498
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F ++ + A +N LI + + E A+ + +M + G++PD+ + + AC+
Sbjct: 499 DAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACS 558
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+++G + F Q ++ +YG K + ++
Sbjct: 559 HCGFVEQGTE--------------FFQ-AMSPIYGITPKKK---------------HYAC 588
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
++ NG ++E KL EM E P+E + SVL+AC
Sbjct: 589 MLDLLGRNGRFAEAEKLMDEMPFE----PDEIMWSSVLNAC 625
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/614 (35%), Positives = 330/614 (53%), Gaps = 47/614 (7%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+RL + L C L K++HA V++ +P+ AS LV A S G
Sbjct: 265 GVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKS--GCFK 322
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + + + LI GF++ F E++ L+N+M + D F L C
Sbjct: 323 EAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC 382
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L G Q+H K G + V NSLI+MY KC+ ++ A AIF+ M++K + SW++
Sbjct: 383 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTS 442
Query: 203 IIAAHASNG------------------LWS-------------ECLKLFGEMNNEKCWRP 231
+I A++ G W+ + L+++ M +E+ RP
Sbjct: 443 MITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 502
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ V++ C LGA LG G ++ ++ V ++I MY KCG + + +F
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 562
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ K ++++ MI+G + HG GK+A+ IF ++L+ G +PD + YV VLS CSH+GLV
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG FD MK + I P ++H+ C+VDL+GRAG L EA +LI MP++ VW +LLSA
Sbjct: 623 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 682
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
K+H N E+ E+AAK++F+++S Y+L++ +YA A + D A+IR M KG+ ++P
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G+S +EV KV+ F + D SHP I + + ++ ++ GY V D R
Sbjct: 743 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGY----------VRTDSTR 792
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
+ HS+KLA+AF L+ L PI I +NLR+C DCHT KLIS + RE ++RD RF
Sbjct: 793 SEIH-HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRF 851
Query: 592 HRFKDGTCSCRDYW 605
H F G+CSC DYW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 66/400 (16%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER------------- 125
G++D A +F +I EP F N+++ G+VK + AL L++ M ER
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246
Query: 126 ------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
GV D+ T+ + ACA+L +L+ G Q+H V + D +
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V ++L+ +Y K + A +F + ++ +W+ +I+ G ++E ++LF +M E
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE- 365
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++ L +++S C L LG+ H +++ V+V SLI MY KC L+
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425
Query: 288 LCLFRM-------------------------------MADKCQLTYSVMISGLAMHGQGK 316
+FR M++K +T++ M+ HG +
Sbjct: 426 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 485
Query: 317 EALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ L ++ ML E + PD V YV + C+ G G R ++ ++
Sbjct: 486 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGR-TVKVGLIIDTSVANA 544
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V+ + + G + EA ++ + + ++ V W ++++ H
Sbjct: 545 VITMYSKCGRILEARKVFDFLNV-KDIVSWNAMITGYSQH 583
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 33/298 (11%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPAL 137
G + A +F ++ +NTL+ G+ + ++ +L + M G P+ FT
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACA 144
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS----------- 186
K+C L +Q+ V K + D V +L++M+ +C V+ AS
Sbjct: 145 MKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTM 204
Query: 187 --------------------AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+F M ++ V SW+ +++A + +G E L + +M +
Sbjct: 205 FCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS- 263
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
K R + + S L+AC L +L GK H +IRN+ ++ V ++L+++Y K GC ++
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 323
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F + D+ + ++V+ISG +G E++ +F++M E + D ++S C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++ N ++N Y K ++ A +F +M + VASW+ +++ + + + L+ F M+
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
P L + +C LG L + + S + V +L+DM+V+CG +
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 285 E-------------------------------KGLCLFRMMADKCQLTYSVMISGLAMHG 313
+ L LF M ++ +++++M+S L+ G
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+ +EAL + +M +G+ D Y L+AC+ + G ++ R +P + Y
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV---IRNLPHIDPY 306
Query: 374 --GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+V+L ++G EA + S+ +N+V W L+S
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLH-DRNNVAWTVLISG 345
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/456 (40%), Positives = 277/456 (60%), Gaps = 3/456 (0%)
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
++H V K +E V +L++ Y K KVE A+ +F +D K + +WSA++A +A G
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 77
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLIRNISALNVIV 270
+K+FGE+ +P E S+L+ C A + GK HG I++ ++ V
Sbjct: 78 ETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 136
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
++L+ MY K G +E +F+ +K ++++ MISG A HGQ +AL +F EM + +
Sbjct: 137 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 196
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+ D V ++GV +AC+HAGLV EG FD M + +I PT +H C+VDL RAG L +A+
Sbjct: 197 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 256
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
++I++MP +WR++L+A +VH E+G +AA+ + + + YVLLSNMYA +
Sbjct: 257 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 316
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
W + AK+R M + + + PG+S +EV K Y F++ DRSHP D IY + + +LK
Sbjct: 317 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 376
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD S VL+D+D++ K L HS++LAIAF LI +GSP+ I +NLR+C DCH
Sbjct: 377 DLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHL 436
Query: 571 YTKLISVIYEREIIVRDRKRFHRF-KDGTCSCRDYW 605
KLI+ I EREI+VRD RFH F DG CSC D+W
Sbjct: 437 VIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 130/255 (50%), Gaps = 5/255 (1%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+VHA V+K + + + L+ A G ++ A +F ID+ ++ ++ G+ +
Sbjct: 18 EVHAQVVKTNYERSSTVGTALLD--AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQ 75
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA-LKEGMQIHGHVFKVGFECDLF 167
E E A+ ++ E+ + G++P+ FTF ++ CA A + +G Q HG K + L
Sbjct: 76 TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC 135
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V ++L+ MY K +E A +FK+ +K + SW+++I+ +A +G + L +F EM K
Sbjct: 136 VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 195
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEK 286
+ + + V +ACTH G ++ G+ ++R+ S ++D+Y + G LEK
Sbjct: 196 V-KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEK 254
Query: 287 GLCLFRMMADKCQLT 301
+ + M + T
Sbjct: 255 AMKVIENMPNPAGST 269
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/559 (35%), Positives = 315/559 (56%), Gaps = 5/559 (0%)
Query: 48 KKVHAHVLKWGFFWNPFC-ASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGF 106
++ H + +K GF + + L C +H M+ A +F + AF FN++I G+
Sbjct: 128 RQCHGYAVKAGFAEQRYVFNAVLYMYCQCAH---MEDASKVFESVSGFDAFAFNSMINGY 184
Query: 107 VKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDL 166
+ + + +L + M + D ++ A+ CA ++ G Q+H K E ++
Sbjct: 185 LDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNV 244
Query: 167 FVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+V ++L++MYGKC+ V A+ F+ + +K+V SW+A++ A+ N L+ + L+LF +M E
Sbjct: 245 YVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEME 304
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
+P E L++C L AL G +++ +++V +L++MY K G +E
Sbjct: 305 GV-QPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIED 363
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M + ++++++I+G A HG +E + F ML + P V +VGVLSAC+
Sbjct: 364 AHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQ 423
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
GLV+E + M E I P +HY C+V L+ R G L EA I + I + V WR
Sbjct: 424 LGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWR 483
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
SLL++ +V+ N +G A+ + Q+ YVLLSNMYA+A RW V K+R M +
Sbjct: 484 SLLNSCQVYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERA 543
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ +SPG S + V V+ F S+++ HP D I + + ++ Q+K GY P+ + VL D+D
Sbjct: 544 VRKSPGVSWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDID 603
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
++ K E L HS+KLA+AF LIH +G+ I I +NLR+C+DCH KLISV+ R+I+VR
Sbjct: 604 DERKEEHLMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVR 663
Query: 587 DRKRFHRFKDGTCSCRDYW 605
D RFH + G CSC DYW
Sbjct: 664 DAVRFHCIEGGICSCNDYW 682
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 179/377 (47%), Gaps = 12/377 (3%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L + K +HA ++ F + +NL++ A G + A ++F + A N L
Sbjct: 26 DLSKGKALHARLITAAHF-DVVLHNNLISFYA--KCGRVGLARTVFDAMPFRNAVSANLL 82
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
+ G+ +E+L L + + G+ + + A A A +++ G Q HG+ K GF
Sbjct: 83 MSGYASSGRHKESLQLL-RVVDFGM--NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGF 139
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+V N+++ MY +C +E AS +F+ + +++++I + G L +
Sbjct: 140 AEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRN 199
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M E + + V+VL C + LG H ++ LNV V ++L+DMY KC
Sbjct: 200 MTGE-AEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCD 258
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ F ++ +K ++++ +++ + ++AL +F +M EG++P++ Y L+
Sbjct: 259 HVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALN 318
Query: 343 ACSH-AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
+C+ A L L MK + V + ++++ ++G + +A + SMP++
Sbjct: 319 SCAGLAALRTGNALGACVMKTGHWDHLLVSN--ALMNMYSKSGSIEDAHRVFISMPLR-- 374
Query: 402 DVVWRSLLSASKVHHNL 418
DVV +L+ HH L
Sbjct: 375 DVVSWNLIITGYAHHGL 391
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 329/614 (53%), Gaps = 47/614 (7%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
+RL + L C L K++HA V++ +P+ AS LV A G
Sbjct: 265 GVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA--KCGCFK 322
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F + + + LI GF++ F E++ L+N+M + D F L C
Sbjct: 323 EAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCC 382
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
L G Q+H K G + V NSLI+MY KC+ ++ A +IF+ M++K + SW++
Sbjct: 383 SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTS 442
Query: 203 IIAAHASNG------------------LWS-------------ECLKLFGEMNNEKCWRP 231
+I AH+ G W+ + L+++ M +EK RP
Sbjct: 443 MITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ V++ C LGA LG G ++ L+ V ++I MY KCG + + +F
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVF 562
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ K ++++ MI+G + HG GK+A+ IF ++L+ G +PD + YV VLS CSH+GLV
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG FD MK + I P ++H+ C+VDL+GRAG L EA +LI MP++ VW +LLSA
Sbjct: 623 EGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSA 682
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
K+H N E+ E+AAK++F+++S Y+L++ +YA A + D A+IR M KG+ ++P
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G+S +EV KV+ F + D SHP I + + ++ ++ GY V D R
Sbjct: 743 GYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGY----------VRTDSPR 792
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
+ HS+KLA+AF L+ L PI I +NLR+C DCHT KLIS + RE ++RD RF
Sbjct: 793 SEIH-HSEKLAVAFGLMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRF 851
Query: 592 HRFKDGTCSCRDYW 605
H F G+CSC DYW
Sbjct: 852 HHFNGGSCSCGDYW 865
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 174/400 (43%), Gaps = 66/400 (16%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER------------- 125
G++D A +F +I EP F N+++ G+VK + AL L++ M ER
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246
Query: 126 ------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
GV D+ T+ + ACA+L +L+ G Q+H V + D +
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPY 306
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V ++L+ +Y KC + A +F + ++ +W+ +IA +G ++E ++LF +M E
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE- 365
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
++ L +++S C L LG+ H +++ V+V SLI MY KC L+
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425
Query: 288 LCLFRM-------------------------------MADKCQLTYSVMISGLAMHGQGK 316
+FR M+ K +T++ M+ HG +
Sbjct: 426 ESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEE 485
Query: 317 EALSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ L +++ ML E + PD V YV + C+ G G R ++ ++
Sbjct: 486 DGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGR-TVKVGLILDTSVANA 544
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
V+ + + G + EA ++ + + ++ V W ++++ H
Sbjct: 545 VITMYSKCGRILEARKVFDFLNV-KDIVSWNAMITGYSQH 583
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 33/298 (11%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPAL 137
G + A +F ++ +NTL+ G+ + ++ +L + M G P+ FTF
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYA 144
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS----------- 186
K+C L +Q+ G V K G + D V +L++M+ +C V+ AS
Sbjct: 145 MKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTI 204
Query: 187 --------------------AIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
+F M ++ V SW+ +++A + +G E L + +M +
Sbjct: 205 FCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS- 263
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
K R + + S L+AC L +L GK H +IRN+ ++ V ++L+++Y KCGC ++
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F + D+ + ++V+I+G HG E++ +F++M E + D ++S C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 120/280 (42%), Gaps = 37/280 (13%)
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
++ N ++N Y K ++ A +F +M + VASW+ +++ + + + L+ F M+
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC- 283
P + +C LG L G + + S + V +L+DM+V+CG
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 284 ------------------------------LEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
++ L LF M ++ +++++M+S L+ G
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
+ +EAL + +M +G+ D Y L+AC+ + G ++ R +P + Y
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV---IRNLPCIDPY 306
Query: 374 --GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+V+L + G EA + S+ +N+V W L++
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLH-DRNNVAWTVLIAG 345
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 328/573 (57%), Gaps = 13/573 (2%)
Query: 38 LKTCKNLEEF----KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+ C EF + +HA + ++GF ++LV+ S GS++ + F + E
Sbjct: 142 INACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSM--YSKCGSLEESVKTFESMTE 199
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
A +N +I F + EAL +MF G+ + T+ L A + LK I
Sbjct: 200 LNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYI 259
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H + + GF+ D V N ++NMYGKC ++ A A+FK M Q V +W+ +IAA++ +G
Sbjct: 260 HDCILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHT 317
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI-VET 272
SE L+ + E+ E+ P++ VSV+ AC LG +++GK H L A V +
Sbjct: 318 SEALRFY-ELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRL--GDRAFQVTELAN 374
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
SL++MY KCG L+ +F A K +T++ MI A H ++A +F M +G EP
Sbjct: 375 SLVNMYGKCGILDVARSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEP 433
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ ++ VLSAC++AGL E F M+ ++ + P HYGC+V+ +G+AG L +A L
Sbjct: 434 SYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEAL 493
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ MP + + + W S L+ + H +++ G+ AAK +I+ + YV L+ ++A A +
Sbjct: 494 IQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDF 553
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+ ++IR M +G+ ++ G S++++ VY+F + D+S+P I++ + +++ ++K
Sbjct: 554 QEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRA 613
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY PD++ V DV+ +K L HS++LAIAF +I SQG+P+RI +NLR+C DCH T
Sbjct: 614 GYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMT 673
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KL S I REIIVRD RFH FK+G+CSC+D+W
Sbjct: 674 KLTSKITRREIIVRDSNRFHHFKNGSCSCKDFW 706
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 200/421 (47%), Gaps = 16/421 (3%)
Query: 32 QECLTILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
+EC+ ++++C L E +++H + + G + + +++LV GS++ A +F
Sbjct: 35 KECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMM--YGKCGSLEEARLVF 92
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQAL 147
F + LI + +EAL L+ EM ++G++P + +F A AC A + L
Sbjct: 93 EATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFL 152
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
G +H + + GF+ + SL++MY KC +E + F+ M + + SW+A+IAA
Sbjct: 153 PAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAF 212
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A + E L+ +M E R ++++SA L + H ++R + +
Sbjct: 213 AEHRRGLEALRTLQKMFLEGI-RACSVTYITLMSAYDQPSQLKSARYIHDCILR--TGFD 269
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V +++MY KCGCL+ +F+ M+ + ++ MI+ + HG EAL + M
Sbjct: 270 QDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQE 329
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
EG+ PDD YV V+ AC+ G + G R L R + +V++ G+ G+L
Sbjct: 330 EGVVPDDYTYVSVIDACATLGDMEVGKQVHRR--LGDRAFQVTELANSLVNMYGKCGILD 387
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVH-HNLEIGEIAAKNLFQINSHHPSDYVLLSNMY 446
A + + V W +++ A H H + E+ L +++ PS +S +
Sbjct: 388 VARSIFDKTA--KGSVTWNAMIGAYAQHSHEQQAFELFL--LMRLDGEEPSYITFMSVLS 443
Query: 447 A 447
A
Sbjct: 444 A 444
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 174/364 (47%), Gaps = 27/364 (7%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
+ ++CA+L AL EG +IH + +VG D++V N L+ MYGKC +E A +F+ K+
Sbjct: 40 VIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAKN 99
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCT 255
V SW+ +I A +G E L LF EM + +P + ++AC+ L G+
Sbjct: 100 VFSWTILITVCAQHGRSQEALALFYEMLKQGI-QPHSVSFTAAINACSAGPEFLPAGRAL 158
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H L R V+ TSL+ MY KCG LE+ + F M + ++++ MI+ A H +G
Sbjct: 159 HALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRG 218
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL---CFDRMKLEYRIVPTVQH 372
EAL +M EG+ V Y+ ++SA + C R + +V
Sbjct: 219 LEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV----- 273
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH-HNLEIGEIAAKNLFQI 431
++++ G+ G L +A + +SM Q + + W ++++A H H E + L Q
Sbjct: 274 -NVILNMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHTSE--ALRFYELMQE 329
Query: 432 NSHHPSDYVLLSNMYARA------------QRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
P DY +S + A A +R D A TE+A+ +N +++VA
Sbjct: 330 EGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELANSLVNMYGKCGILDVA 389
Query: 480 RKVY 483
R ++
Sbjct: 390 RSIF 393
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/525 (36%), Positives = 309/525 (58%), Gaps = 6/525 (1%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
++ A +F Q+ + + T+I + K ++AL L M V P+ +T+ ++ ++
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C + ++ +H + K G E D+FV+++LI+++ K + E A ++F +M W
Sbjct: 172 CNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
++II A N L+LF M + E++ L SVL ACT L L+LG H ++
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
+ L I+ +L+DMY KCG LE L +F M ++ +T+S MISGLA +G +EAL
Sbjct: 288 KYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALK 345
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F M G +P+ + VGVL ACSHAGL+ +G F MK Y I P +HYGC++DL+
Sbjct: 346 LFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
G+AG L +A++L+ M + + V WR+LL A +V N+ + E AAK + ++ Y
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
LLSN+YA +Q+W V +IRT M +G+ + PG S +EV ++++ F+ D SHP + +
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSK 525
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
++Q+ +L GY P+ + VL+D++ ++ + L+ HS+KLA+AF L+ L IRI +
Sbjct: 526 KLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRK 585
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
NLR+C DCH + KL S + R I++R R+H F+DG CSC DYW
Sbjct: 586 NLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 143/314 (45%), Gaps = 48/314 (15%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++L++C + + + +H ++K G + F S L+ A G + A S+F ++
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFA--KLGEPEDALSVFDEMVTGD 224
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
A +N++I GF + + AL L+ M G + T ++ +AC L L+ GMQ H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
H+ K ++ DL + N+L++MY KC +E A +F QM ++ V +WS +I+ A NG E
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
LKLF M + +P +V VL AC+H
Sbjct: 343 ALKLFERMKSSGT-KPNYITIVGVLFACSH------------------------------ 371
Query: 276 DMYVKCGCLEKGLCLFRMMA-----DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
G LE G FR M D + Y MI L G+ +A+ + +EM
Sbjct: 372 -----AGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---EC 423
Query: 331 EPDDVVYVGVLSAC 344
EPD V + +L AC
Sbjct: 424 EPDAVTWRTLLGAC 437
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 14/304 (4%)
Query: 111 EFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQN 170
+ A+ + + G+ D+ T+ L K C +A+ EG I H++ G +F+ N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
LINMY K + A +F QM Q++V SW+ +I+A++ + + L+L M + R
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-R 159
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P SVL +C + + + H +I+ +V V ++LID++ K G E L +
Sbjct: 160 PNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F M + ++ +I G A + + AL +F M R G + VL AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 351 NEGLLCFDRMKLEYRIVPTVQHY---GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
G M+ IV Q +VD+ + G L +AL + M +++ + W +
Sbjct: 277 ELG------MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWST 329
Query: 408 LLSA 411
++S
Sbjct: 330 MISG 333
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 315/564 (55%), Gaps = 15/564 (2%)
Query: 49 KVHAHVLKWGFF-WNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIR 104
++H+ +++G+ +PF V+ AL + G + A +F ++ +N ++
Sbjct: 139 QIHSLAIRFGYLPVDPF-----VSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + E + Y + E G P+ + A F ACA L G Q HG V K GFE
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF--GE 222
D+ V NS+++ YGKC A A+F M ++ SW +++AA+A NG E +
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGAR 313
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
+ E+ P + ++ S L+ C L L LG+ H +R+ N+ V ++L+DMY KCG
Sbjct: 314 RSGEE---PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCG 370
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVL 341
C+E +F + +T++ MI G A G + AL +F +M+R G P+ + V V+
Sbjct: 371 CVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVI 430
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
++CS GL +G F+ M+ + I P +HY CVVDL+GRAGM +A E+IQ MP++ +
Sbjct: 431 TSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPS 490
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
VW +LL A K+H E+G IAA+ LF+++ ++VLLSNM+A A RW + IR E
Sbjct: 491 ISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKE 550
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M + G+ + PG S V V+ F ++D H ++ I ++ ++ Q++ GY PD
Sbjct: 551 MKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYS 610
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L D++E+EK + HS+KLA+AF LI + G PIRI +NLR+C DCH K IS I R
Sbjct: 611 LYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGR 670
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRD RFH FK CSC DYW
Sbjct: 671 EIIVRDNNRFHHFKQYQCSCGDYW 694
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 165/367 (44%), Gaps = 20/367 (5%)
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE-GMQ 152
P + I G + AL + M G+ P++FTFP+ FKA A G Q
Sbjct: 80 PTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQ 139
Query: 153 IHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH + G+ D FV + ++MY K +++ A +F +M ++V +W+A++ +G
Sbjct: 140 IHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDG 199
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA------LDLGKCTHGSLIRNISA 265
E ++ + + E L +V+SAC A L LG+ HG +++
Sbjct: 200 RPLETIEAYFGLR-------EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFE 252
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
++V V S++D Y KC C K +F M + +++ M++ A +G +EA + +
Sbjct: 253 MDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGA 312
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGL-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
R G EP D + L+ C AGL+ L + + I + +VD+ G+ G
Sbjct: 313 RRSGEEPTDFMVSSALTTC--AGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCG 370
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ +A ++ P Q+N V W +++ + + + ++ + P +Y+ L N
Sbjct: 371 CVEDAEQIFYETP-QRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAP-NYITLVN 428
Query: 445 MYARAQR 451
+ R
Sbjct: 429 VITSCSR 435
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 251 LGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
LG+ H +R I+ AL+ + L+++Y K ++Y+ ISG
Sbjct: 33 LGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGA 92
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT 369
A HG+ ALS F+ MLR GL P+D + A + A + + + + +P
Sbjct: 93 AQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPV 152
Query: 370 VQHYGC-VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
C +D+ + G L A L MP +N V W ++++
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMP-NRNVVAWNAVMT 193
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 127/313 (40%), Gaps = 7/313 (2%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFK-VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
A F++ ++ + G H + + F+ L+N+Y K + A+A
Sbjct: 20 AAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPH 79
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD-LGK 253
+V S++A I+ A +G L F M RP + S A +G
Sbjct: 80 PTVVSYTAFISGAAQHGRPLPALSAFAGMLRLG-LRPNDFTFPSAFKAAASAPPRSTIGP 138
Query: 254 CTHGSLIR-NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMH 312
H IR ++ V + +DMY K G L+ LF M ++ + ++ +++ +
Sbjct: 139 QIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLD 198
Query: 313 GQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQH 372
G+ E + + + G P+ V +AC+ A ++ G F ++ V
Sbjct: 199 GRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQ-FHGFVVKCGFEMDVSV 257
Query: 373 YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQIN 432
+VD G+ G+A + M + +N V W S++ A+ + E AA + +
Sbjct: 258 LNSMVDFYGKCRCAGKARAVFDGMGV-RNSVSWCSMV-AAYAQNGAEEEAFAAYLGARRS 315
Query: 433 SHHPSDYVLLSNM 445
P+D+++ S +
Sbjct: 316 GEEPTDFMVSSAL 328
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 318/558 (56%), Gaps = 34/558 (6%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K+ H +VL+ GF + + ++L+ +H S+ A ++F + F +N+L+ G+
Sbjct: 390 KETHGYVLRNGFDCDVYVGTSLIDMYVKNH--SLTSAQAVFDNMKNRNIFAWNSLVSGYS 447
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ FE+AL L N+M + G++PD T+ + A KE + + +G
Sbjct: 448 FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGL----- 502
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
+V SW+A+I+ + G + LK F +M E
Sbjct: 503 --------------------------TPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEG 536
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P + + +L AC L L GK H IRN +V V T+LIDMY K L+
Sbjct: 537 V-MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 595
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+FR + +K +++ MI G A+ G GKEA+S+F+EM + G+ PD + + +LSAC ++
Sbjct: 596 HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNS 655
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GL+ EG FD M +YRIVP ++HY C+VDL+GRAG L EA +LI +MP++ + +W +
Sbjct: 656 GLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGA 715
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
LL + ++H NL+ E AAKNLF++ ++ ++Y+L+ N+Y+ RW D+ +R M + G+
Sbjct: 716 LLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGV 775
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
+S +++ ++V+ F S ++ HP IY ++Q+ ++K GY PD++ V +++DE
Sbjct: 776 RNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDE 835
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
EK++ L H++KLAI + LI + G PIR+ +N R+C+DCH+ K IS++ RE+ +RD
Sbjct: 836 VEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRD 895
Query: 588 RKRFHRFKDGTCSCRDYW 605
RFH F++G CSC D+W
Sbjct: 896 GVRFHHFREGKCSCNDFW 913
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 202/407 (49%), Gaps = 48/407 (11%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPF--CA-SNLVATCALSHWGSMDYACSIFRQI 91
LKTC + + ++H ++K GF + + CA N C WG ++ A +F ++
Sbjct: 140 LKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRC----WG-LEKANQVFHEM 194
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P A +N I ++ + ++ + L+ +M ++ + T + +AC K+ AL
Sbjct: 195 PNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAK 254
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
QIHG+VF+ G + D+ + N LI+MY K K+E A +F M+ ++ +SW+++I+++A+ G
Sbjct: 255 QIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALG 314
Query: 212 LWSECLKLFGEMNNE----------------------------------KCWRPEESILV 237
++ LF E+ + + ++P S +
Sbjct: 315 FLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMT 374
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
SVL A + LG L++GK THG ++RN +V V TSLIDMYVK L +F M ++
Sbjct: 375 SVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR 434
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++ ++SG + G ++AL + ++M +EG++PD V + G++S + G E L
Sbjct: 435 NIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVL 494
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ K + P V + ++ +AG ++L+ M QQ V+
Sbjct: 495 HQTK-SLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQM--QQEGVM 538
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 166/361 (45%), Gaps = 10/361 (2%)
Query: 7 LHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCA 66
LH L +P K P L L +L K +HA ++K WNP A
Sbjct: 10 LHPPLQNPLTHKPIKTPTSKLYLDSHSS-DDSNVITSLTSVKMMHAQMIKLPQKWNPDAA 68
Query: 67 S-NLVATCALSHWGSMDY--ACSIFRQIDEPGAFDFNTLIRGFVKEV-EFEEALFLYNEM 122
+ NL++ S+ G D+ A +F +N+ + F L ++ E+
Sbjct: 69 AKNLIS----SYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKEL 124
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
+GV D+ + K C ++ + GM+IHG + K GF+ D++++ +L+N YG+C +
Sbjct: 125 HGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGL 184
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
E A+ +F +M W+ I + + + ++LF +M + E + +V VL A
Sbjct: 185 EKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFL-KAETATIVRVLQA 243
Query: 243 CTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
C +GAL+ K HG + R +V + LI MY K G LE +F M ++ ++
Sbjct: 244 CGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSW 303
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MIS A G +A S+F E+ ++PD V + +LS G E L RM+
Sbjct: 304 NSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQG 363
Query: 363 E 363
E
Sbjct: 364 E 364
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 44/283 (15%)
Query: 79 GSMDYACSIFRQID----EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF 134
G ++ A S+F +++ +P +N L+ G EE L + M G +P++ +
Sbjct: 314 GFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSM 373
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
++ +A ++L L G + HG+V + GF+CD++V SLI+MY K + A A+F M
Sbjct: 374 TSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN 433
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
+++ +W+++++ ++ G++ + L+L +M E +P+
Sbjct: 434 RNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI-KPD---------------------- 470
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD----KCQLTYSVMISGLA 310
++ +I Y GC ++ L + ++++ +ISG +
Sbjct: 471 -------------LVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSS 517
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
G +++L F++M +EG+ P+ +L AC+ L+ +G
Sbjct: 518 QAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKG 560
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 317/581 (54%), Gaps = 12/581 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG---SMDYACSIFRQI 91
+++L C L A VL+ N++ T L+ + + A + F I
Sbjct: 223 VSVLNACSMLP-VGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAI 281
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALK 148
P +N + +++ EAL L+ M GV P TF ACA A
Sbjct: 282 QSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 341
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAA 206
G +I + + G E D V N+ +NMY KC + A A+F+++ ++ +W++++AA
Sbjct: 342 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAA 401
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ +GL E +LF M EK +P + V+VL A T ++ G+ H ++ N
Sbjct: 402 YGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFES 461
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMHGQGKEALSIFSE 324
+ +++ +L++MY KCG L+ +F + + + ++ +++G A +GQ + AL +F
Sbjct: 462 DTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWT 521
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M ++G+ P+ + ++ L+AC+H G + +G M ++ IVP +H+ C+VDL+GR G
Sbjct: 522 MQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCG 581
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA +L++ Q + + W +LL A K LE GE A+ + Q++ S Y++L++
Sbjct: 582 RLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLAS 640
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
MYA A RW + A IR M KG+ PG S VEV ++++ F + D+SHP + IY + +
Sbjct: 641 MYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELER 700
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ W +K GY D VL DV ++ K L HS+KLAIAF L+ GSP+R+ +NLR+
Sbjct: 701 LHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRV 760
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C+DCHT TKLIS + R+I++RD R+H F GTCSC DYW
Sbjct: 761 CSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 801
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 215/474 (45%), Gaps = 68/474 (14%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD---F 99
NL +++H+ + F N + L++ S GS+ A F ++ D +
Sbjct: 22 NLAAGRRIHSQISDRDFEENSVLGNALISM--YSKCGSLIDAKQAFDRLPRASKRDVVTW 79
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDN-FTFPALFKAC--AKLQALKEGMQIHGH 156
N +I F++ EAL L+ +M G P N TF ++ +C A L +L++ IHG
Sbjct: 80 NAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGR 139
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIF-KQMDQK---SVASWSAIIAAHASNGL 212
+ G E + FV+ +L++ YGK ++ A +F ++ D++ S+ + SA+I+A NG
Sbjct: 140 IVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGW 199
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV---- 268
E L+LF MN E +P LVSVL+AC+ L +G T L + + ++
Sbjct: 200 PQESLRLFYAMNLEGT-KPSGVTLVSVLNACSML---PVGSATAFVLEQAMEVVSATRDN 255
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
++ T+L+ Y + L + F + ++++ M + H + +EAL +F ML E
Sbjct: 256 VLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLE 315
Query: 329 GLEPDDVVYVGVLSACS-------------------HAGLVNE--------------GLL 355
G+ P ++ L+AC+ AGL + G L
Sbjct: 316 GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSL 375
Query: 356 CFDRMKLEYRIVPTVQH---YGCVVDLMGRAGMLGEALELIQSMP----IQQNDVVWRSL 408
R E RI PT + + ++ G G+ EA EL Q+M ++ N V + ++
Sbjct: 376 ADARAVFE-RISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAV 434
Query: 409 LSASKVHHNLEIG-EIAAKNLFQINSHHPSDYVL---LSNMYARAQRWYDVAKI 458
L AS ++ G EI A+ +++ SD V+ L NMYA+ D I
Sbjct: 435 LDASTSRTSIAQGREIHAR---VVSNGFESDTVIQNALLNMYAKCGSLDDAQAI 485
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 114/228 (50%), Gaps = 9/228 (3%)
Query: 127 VEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFAS 186
V P+ AL AC+ L L G +IH + FE + + N+LI+MY KC + A
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 187 AIFKQMDQKS---VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSAC 243
F ++ + S V +W+A+I+A NG E L+LF +M+++ P VSVL +C
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 244 THLGALDLG--KCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK---- 297
G L L + HG ++ V T+L+D Y K G L+ +F +D+
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+T S MIS +G +E+L +F M EG +P V V VL+ACS
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS 230
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 318/581 (54%), Gaps = 12/581 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG---SMDYACSIFRQI 91
+++L C L+ A VL+ N++ T L+ + + A + F I
Sbjct: 357 VSVLNACSMLQ-VGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAI 415
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALK 148
P +N + +++ EAL L+ M GV P TF ACA A
Sbjct: 416 QSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASA 475
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAA 206
G +I + + G E D V N+ +NMY KC + A A+F+++ ++ +W++++AA
Sbjct: 476 IGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAA 535
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ +GL E +LF M EK +P + V+VL A T ++ G+ H ++ N
Sbjct: 536 YGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFES 595
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ--LTYSVMISGLAMHGQGKEALSIFSE 324
+ +++ +L++MY KCG L+ +F + + + ++ +I+G A +GQ + AL +F
Sbjct: 596 DTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWT 655
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
M ++G+ P+ V ++ L+AC+H G + +G M ++ I+P +H+ C+VDL+GR G
Sbjct: 656 MQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCG 715
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
L EA +L++ Q + + W +LL A K LE GE A+ + Q++ S Y++L++
Sbjct: 716 RLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLAS 774
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
MYA A RW + A IR M KG+ PG S VEV ++++ F + D+SHP + IY + +
Sbjct: 775 MYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELER 834
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ W +K GY D VL DV ++ K L HS+KLAIAF L+ GSP+R+ +NLR+
Sbjct: 835 LHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRV 894
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C+DCHT TKLIS + R+I++RD R+H F GTCSC DYW
Sbjct: 895 CSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVL--KWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+L+ C L K ++HAH+L + + F AS+L+ A G++ A ++ +
Sbjct: 49 LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHA--KCGNLAEAEALADRF 106
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ +IR +++ ++A+ L++ M V P+ AL AC+ L L G
Sbjct: 107 --ASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAAGR 161
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS---VASWSAIIAAHA 208
+IH + FE + + N+LI+MY KC + A F ++ + S V +W+A+I+A
Sbjct: 162 RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 221
Query: 209 SNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG--KCTHGSLIRNISAL 266
NG E L+LF +M+ + P VSVL +C G L L + HG ++
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 281
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADK----CQLTYSVMISGLAMHGQGKEALSIF 322
V T+L+D Y K G L+ +F D+ +T S MIS +G +E+L +F
Sbjct: 282 EAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341
Query: 323 SEMLREGLEPDDVVYVGVLSACS 345
M EG +P V V VL+ACS
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACS 364
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 226/505 (44%), Gaps = 75/505 (14%)
Query: 19 PPKGPELNLRLK-EQEC---LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
P K EL R++ C + ++ C NL +++H+ + F N + L++
Sbjct: 125 PDKAMELFDRMEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALIS 184
Query: 72 TCALSHWGSMDYACSIFRQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
S GS+ A F ++ D +N +I F++ EAL L+ +M G
Sbjct: 185 M--YSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAP 242
Query: 129 PDN-FTFPALFKAC--AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
P N TF ++ +C A L +L++ IHG + G E + FV+ +L++ YGK ++ A
Sbjct: 243 PPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDA 302
Query: 186 SAIF-KQMDQK---SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
+F ++ D++ S+ + SA+I+A NG E L+LF MN E +P LVSVL+
Sbjct: 303 WEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGT-KPSGVTLVSVLN 361
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNV----IVETSLIDMYVKCGCLEKGLCLFRMMADK 297
AC+ L +G T L + + ++ ++ T+L+ Y + L + F +
Sbjct: 362 ACS---MLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSP 418
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS------------ 345
++++ M + H + +EAL +F ML EG+ P ++ L+AC+
Sbjct: 419 DVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGK 478
Query: 346 -------HAGLVNE--------------GLLCFDRMKLEYRIVPTVQH---YGCVVDLMG 381
AGL + G L R E RI P + + ++ G
Sbjct: 479 RIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFE-RISPARRDCITWNSMLAAYG 537
Query: 382 RAGMLGEALELIQSMP----IQQNDVVWRSLLSASKVHHNLEIG-EIAAKNLFQINSHHP 436
G+ EA EL Q+M ++ N V + ++L AS ++ G EI A+ +++
Sbjct: 538 HHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHAR---VVSNGFE 594
Query: 437 SDYVL---LSNMYARAQRWYDVAKI 458
SD V+ L NMYA+ D I
Sbjct: 595 SDTVIQNALLNMYAKCGSLDDAQAI 619
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 21/271 (7%)
Query: 133 TFPALFKACAKLQALKEGMQIHGHVF--KVGFECDLFVQNSLINMYGKCEKVEFASAIFK 190
T+ L +AC +L+ALK+G ++H H+ ++ F+ + LI M+ KC + A A+
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104
Query: 191 QMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
+ SV S +A+I A +G + ++LF M RP L+++++AC+ LG L
Sbjct: 105 RF--ASVYSCTAMIRAWMEHGRPDKAMELFDRME----VRPNCHALIALVNACSCLGNLA 158
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ---LTYSVMIS 307
G+ H + N ++ +LI MY KCG L F + + +T++ MIS
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218
Query: 308 GLAMHGQGKEALSIFSEMLREGL-EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
+G +EAL +F +M R+G P+ V +V VL +C AGL++ D + RI
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLS----LEDVRAIHGRI 274
Query: 367 VPT-VQHYGCV----VDLMGRAGMLGEALEL 392
V ++ V VD G+ G L +A E+
Sbjct: 275 VGAGIEREAFVRTALVDSYGKLGSLDDAWEV 305
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/542 (37%), Positives = 311/542 (57%), Gaps = 12/542 (2%)
Query: 65 CASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
++N++ L G +D A IF ++ E + T+I G+ + + A L+ M E
Sbjct: 174 ASTNMIG--GLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE 231
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
+ E + + +++ +E F+V + N++I +G+ ++
Sbjct: 232 K-TEVSWTSMLLGYTLSGRIEDAEE-------FFEVMPMKPVIACNAMIVGFGEVGEISK 283
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F M+ + A+W +I A+ G E L LF +M + RP L+S+LS C
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV-RPSFPSLISILSVCA 342
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
L +L G+ H L+R +V V + L+ MYVKCG L K +F + K + ++
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNS 402
Query: 305 MISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEY 364
+ISG A HG G+EAL IF EM G P+ V + +L+ACS+AG + EGL F+ M+ ++
Sbjct: 403 IISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKF 462
Query: 365 RIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIA 424
+ PTV+HY C VD++GRAG + +A+ELI+SM I+ + VW +LL A K H L++ E+A
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVA 522
Query: 425 AKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYK 484
AK LF+ + YVLLS++ A +W DVA +R M + +++ PG S +EV +KV+
Sbjct: 523 AKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHM 582
Query: 485 FVSQD-RSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAI 543
F ++HP I M+ + + L+ GYSPD S VL DVDE+EK + L HS++LA+
Sbjct: 583 FTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAV 642
Query: 544 AFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRD 603
A+ L+ L +G PIR+ +NLR+C DCH KLIS + EREII+RD RFH F +G CSCRD
Sbjct: 643 AYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRD 702
Query: 604 YW 605
YW
Sbjct: 703 YW 704
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 140/322 (43%), Gaps = 51/322 (15%)
Query: 173 INMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPE 232
I+ + K+ A F + K++ SW++I++ + SNGL E +LF EM+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS-------- 75
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLI--RNISAL----NVIVETSLIDMYVKCGCLEK 286
E +VS L G + ++ RN+ L NV+ T+++ Y++ G + +
Sbjct: 76 ERNVVS-------WNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGE 128
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
LF M ++ +++++VM GL G+ +A ++ M + D V ++
Sbjct: 129 AESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCR 184
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
G V+E L FD M+ + T G + + A +L + MP ++ +V W
Sbjct: 185 EGRVDEARLIFDEMRERNVVTWTTMITG-----YRQNNRVDVARKLFEVMP-EKTEVSWT 238
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMY----------ARAQRWYDVA 456
S+L + +E A+ F++ P V+ N ++A+R +D+
Sbjct: 239 SMLLGYTLSGRIE----DAEEFFEVMPMKP---VIACNAMIVGFGEVGEISKARRVFDLM 291
Query: 457 KIRTEMASKGLNQS---PGFSL 475
+ R +G+ ++ GF L
Sbjct: 292 EDRDNATWRGMIKAYERKGFEL 313
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 21/264 (7%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK--AC 141
A ++F + E + +++G+++E EA L+ M ER F L
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRI 157
Query: 142 AKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWS 201
K + L + M + D+ ++I + +V+ A IF +M +++V +W+
Sbjct: 158 DKARKLYDMMPVK----------DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 202 AIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+I + N KLF E+ EK E S+L T G ++ +
Sbjct: 208 TMITGYRQNNRVDVARKLF-EVMPEKT----EVSWTSMLLGYTLSGRIEDAE----EFFE 258
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ VI ++I + + G + K +F +M D+ T+ MI G EAL +
Sbjct: 259 VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 322 FSEMLREGLEPDDVVYVGVLSACS 345
F++M ++G+ P + +LS C+
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCA 342
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++ T +L+ ++VHAH+++ F + + AS L+ G + A +F +
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV--KCGELVKAKLVFDRFSSK 395
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N++I G+ EEAL +++EM G P+ T A+ AC+ L+EG++I
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 155 GHVFKVGFECDLFVQ--NSLINMYGKCEKVEFASAIFKQMDQKSVAS-WSAIIAA 206
+ F V+ + ++M G+ +V+ A + + M K A+ W A++ A
Sbjct: 456 -ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGA 509
>gi|297805646|ref|XP_002870707.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316543|gb|EFH46966.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 517
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/510 (37%), Positives = 301/510 (59%), Gaps = 4/510 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+N+LI G+ + + + M E G P+ TF ++ AC +EG+ IHG
Sbjct: 9 WNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGL 68
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
V K G ++ V N+L+N+YGK + + +F+ + K++ SW+ +I H NGL E
Sbjct: 69 VMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEG 128
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
L F M+ +P+++ ++VL C +G + L + HG ++ N + T+L+D
Sbjct: 129 LAYF-NMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLD 187
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y K G LE +F + + ++ M++ A HG G++A+ F M+ GL PD V
Sbjct: 188 LYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVT 247
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+ +L+ACSH+GLV EG F+ M YRI P + HY C+VDLMGR+G+L +A LI+ M
Sbjct: 248 FTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEM 307
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P++ + VW +LL A +V+ + ++G AAK LF++ +Y++LSN+Y+ + W D +
Sbjct: 308 PMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDAS 367
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE-GYS 515
+IR M KGL ++ G+S +E K++KFV D SHP + I + + ++ ++K E G+
Sbjct: 368 RIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSELGFK 427
Query: 516 PDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLI 575
VL DVDED K E + HS+K+A+AF L+ +S PI I +NLR+C DCH K I
Sbjct: 428 SRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPIIIRKNLRICGDCHETAKAI 487
Query: 576 SVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
S+I +R II+RD KRFH F +G+CSCRDYW
Sbjct: 488 SLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 517
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 49/329 (14%)
Query: 24 ELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS 80
E+ R E L+++ C N EE +H V+K G + L+ + G
Sbjct: 36 EVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKT--GD 93
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ +C +F + +NT+I ++ EE L +N G++PD TF A+ +
Sbjct: 94 LISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRV 153
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
C + ++ IHG + GF + + +L+++Y K ++E +S +F ++ +W
Sbjct: 154 CEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAW 213
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
+A++AA+A++G + +K F E+ P+ +L+AC+H
Sbjct: 214 TAMLAAYATHGYGRDAIKHF-ELMVHYGLSPDHVTFTHLLNACSH--------------- 257
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQG 315
G +E+G F M+ + ++ YS M+ + G
Sbjct: 258 --------------------SGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLL 297
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSAC 344
++A + EM +EP V+ +L AC
Sbjct: 298 QDAYGLIKEM---PMEPSSGVWGALLGAC 323
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE--GLEPDDVVYVGVLSACSHAGLVN 351
M ++ + ++ +ISG A G + + S M+R G P++V ++ ++SAC H G
Sbjct: 1 MPERDLVAWNSLISGYAGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKE 60
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLL 409
EG +C + ++ ++ V+ +++L G+ G L + +L + + + +N V W +++
Sbjct: 61 EG-VCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSV-KNLVSWNTMI 116
>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
Length = 587
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 315/564 (55%), Gaps = 15/564 (2%)
Query: 49 KVHAHVLKWGFF-WNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIR 104
++H+ +++G+ +PF V+ AL + G + A +F ++ +N ++
Sbjct: 32 QIHSLAIRFGYLPVDPF-----VSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 86
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + E + Y + E G P+ + A F ACA L G Q HG V K GFE
Sbjct: 87 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 146
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF--GE 222
D+ V NS+++ YGKC A A+F M ++ SW +++AA+A NG E +
Sbjct: 147 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGAR 206
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
+ E+ P + ++ S L+ C L L LG+ H +R+ N+ V ++L+DMY KCG
Sbjct: 207 RSGEE---PTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCG 263
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVL 341
C+E +F + +T++ MI G A G + AL +F +M+R G P+ + V V+
Sbjct: 264 CVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVI 323
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQN 401
++CS GL +G F+ M+ + I P +HY CVVDL+GRAGM +A E+IQ MP++ +
Sbjct: 324 TSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPS 383
Query: 402 DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTE 461
VW +LL A K+H E+G IAA+ LF+++ ++VLLSNM+A A RW + IR E
Sbjct: 384 ISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKE 443
Query: 462 MASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQV 521
M + G+ + PG S V V+ F ++D H ++ I ++ ++ Q++ GY PD
Sbjct: 444 MKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYS 503
Query: 522 LRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYER 581
L D++E+EK + HS+KLA+AF LI + G PIRI +NLR+C DCH K IS I R
Sbjct: 504 LYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGR 563
Query: 582 EIIVRDRKRFHRFKDGTCSCRDYW 605
EIIVRD RFH FK CSC DYW
Sbjct: 564 EIIVRDNNRFHHFKQYQCSCGDYW 587
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 20/339 (5%)
Query: 122 MFERGVEPDNFTFPALFKACAKLQALKE-GMQIHGHVFKVGF-ECDLFVQNSLINMYGKC 179
M G+ P++FTFP+ FKA A G QIH + G+ D FV + ++MY K
Sbjct: 1 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 60
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+++ A +F +M ++V +W+A++ +G E ++ + + E L +V
Sbjct: 61 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR-------EAGGLPNV 113
Query: 240 LSACTHLGA------LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+SAC A L LG+ HG +++ ++V V S++D Y KC C K +F
Sbjct: 114 VSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDG 173
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + +++ M++ A +G +EA + + R G EP D + L+ C AGL+
Sbjct: 174 MGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTC--AGLLGLH 231
Query: 354 L-LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
L + + I + +VD+ G+ G + +A ++ P Q+N V W +++
Sbjct: 232 LGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETP-QRNLVTWNAMIGGY 290
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+ + + ++ + P +Y+ L N+ R
Sbjct: 291 AHIGDAQNALLVFDDMIRSGETAP-NYITLVNVITSCSR 328
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 323/554 (58%), Gaps = 10/554 (1%)
Query: 59 FFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFL 118
F +PF ++ L+ A + G + A +F + F +N L++ EEAL
Sbjct: 110 FRSDPFLSTRLID--AYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALAR 167
Query: 119 YNEMFERGVEPDNFTFPALFKAC-----AKLQALKEGMQIHGHVFKVGFECDLFVQNSLI 173
+M V D++++ KAC + + A +IH H + G+ V +LI
Sbjct: 168 LADMGRLRVPVDSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLI 227
Query: 174 NMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKCWRPE 232
+ Y K V +A ++F M +++V SW+A+I +A N + + LF EM +++ P
Sbjct: 228 DCYAKLGIVSYAESVFATMPERNVVSWTAMIGCYAKNERPGDAILLFQEMVASDEDLVPN 287
Query: 233 ESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFR 292
+V +L A + AL GK H ++R V V +L+ MY+KCGCLE G +F
Sbjct: 288 SVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSLVSVLNALMAMYMKCGCLEAGRHIFD 347
Query: 293 MMAD-KCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
++ K ++++ +ISG MHG G EA+ +F +M + G+ P+ + ++ VL ACSHAGLV+
Sbjct: 348 LIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMGVSPNIITFISVLGACSHAGLVD 407
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
EG F+ M ++Y + P +HY C+VDL+GRAG L EA+ELIQ M I+ + VW SLL A
Sbjct: 408 EGKRLFESM-VDYNVTPRAEHYACMVDLLGRAGHLDEAVELIQGMHIRPSPQVWGSLLGA 466
Query: 412 SKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSP 471
++H ++E E+A LF + + +YVLL+++YARA+ +V ++ + L + P
Sbjct: 467 CRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADIYARAKLHSEVGVLKDLLEEHALEKVP 526
Query: 472 GFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKR 531
G S +EV ++++ FVS D +P + + +I + Q+K +GY PD VL D++E+EK
Sbjct: 527 GCSWIEVKKRLHMFVSVDNKNPQIEELQALIGEFVTQMKNDGYVPDTGAVLYDIEEEEKE 586
Query: 532 ERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRF 591
+ L GHS+KLA+AF LI+ +G IRI +NLR+C DCH+ TK IS EREIIVRD RF
Sbjct: 587 KILLGHSEKLAVAFGLINTGRGEVIRITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRF 646
Query: 592 HRFKDGTCSCRDYW 605
H F+DG CSC DYW
Sbjct: 647 HHFRDGICSCGDYW 660
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 124/250 (49%), Gaps = 6/250 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++HAH ++ G+ + A+ L+ A G + YA S+F + E + +I +
Sbjct: 205 REIHAHAVRRGYGLHTHVATTLIDCYA--KLGIVSYAESVFATMPERNVVSWTAMIGCYA 262
Query: 108 KEVEFEEALFLYNEMF--ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
K +A+ L+ EM + + P++ T + A A + AL +G +H ++ + GF+
Sbjct: 263 KNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSL 322
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+ V N+L+ MY KC +E IF + +K V SW+ +I+ + +G E +++F +M
Sbjct: 323 VSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDM- 381
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ P +SVL AC+H G +D GK S++ ++D+ + G L
Sbjct: 382 TQMGVSPNIITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLGRAGHL 441
Query: 285 EKGLCLFRMM 294
++ + L + M
Sbjct: 442 DEAVELIQGM 451
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 210/549 (38%), Positives = 317/549 (57%), Gaps = 26/549 (4%)
Query: 20 PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATC-----A 74
PKGP L L C +L ++HA +K G +P + L+ C A
Sbjct: 18 PKGP----------LLPHLPHCTSLRALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAA 67
Query: 75 LSHWGSMDYACSIFRQIDEPGAFD-FNTLIRGFVKEVE-FEEALFLYNEMFERGVEPDNF 132
+H + YA +F +I PG +NTL+RG+ + + EA + M E GV PD +
Sbjct: 68 PAH---LAYARQVFDRIPTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTY 124
Query: 133 TFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM 192
TF +L KACA +A +EG Q HG K G +V +LINMY +C A A+F ++
Sbjct: 125 TFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRV 184
Query: 193 DQKS-VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDL 251
V S++A+I A + E L LF EM K +P + SVLSAC LGAL+L
Sbjct: 185 PNGDCVVSYNAMITAAVRSSRPGEALVLFREMQ-AKGLKPTSVTVTSVLSACALLGALEL 243
Query: 252 GKCTHGSLIRNISALNVI-VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLA 310
G+ H +R +++ V T+LIDMY KCG LE + +F+ M + + +SVMI A
Sbjct: 244 GRWIH-EYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYA 302
Query: 311 MHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTV 370
H G+EA+S+F EM ++G+ PD V ++GVL ACSH+G+V+EGL FD M+ EY IVP +
Sbjct: 303 NHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMR-EYGIVPGI 361
Query: 371 QHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
+HYGCV DL+ R+G L +A + I +PIQ ++WR+LLSA H +++G+ + + +
Sbjct: 362 KHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILE 421
Query: 431 INSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDR 490
++ H SDYV+ SN+ A +W ++ ++R M KG+ + PG S +E+ +V++F + D
Sbjct: 422 LDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDG 481
Query: 491 SHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIH 549
HP + M+ Q+ QLK GY P+ SQV ++ E+EK L+ HS+KLAI+F L++
Sbjct: 482 RHPQSQDARRMVDQVIEQLKLVGYVPNTSQVFHVEMGEEEKATSLRYHSEKLAISFGLLN 541
Query: 550 LSQGSPIRI 558
S G+ +R+
Sbjct: 542 TSPGTTLRV 550
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/507 (37%), Positives = 302/507 (59%), Gaps = 2/507 (0%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+ +LI G+ + +EAL L M +P+ FTF +L KA + G QIH
Sbjct: 9 WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
K + D++V ++L++MY +C +++ A A+F Q++ K+ SW+A+IA A G L
Sbjct: 69 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 128
Query: 219 LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMY 278
+F EM + SV SA +GAL+ GK H +I++ L+ V +++DMY
Sbjct: 129 MFAEMQRNG-FEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMY 187
Query: 279 VKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
K G + +F + K +T++ M++ A +G G+EA++ F EM + G+ + + ++
Sbjct: 188 AKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFL 247
Query: 339 GVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
+L+ACSH GLV EG FD MK E+ + P + HY VVDL+GRAG+L +AL I MP+
Sbjct: 248 SILTACSHGGLVKEGKQYFDMMK-EHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPM 306
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKI 458
+ VW +LL + ++H N +IG+ AA ++F+++ VLL N+YA +W A++
Sbjct: 307 KPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARV 366
Query: 459 RTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDI 518
R M + G+ + P S VE+ V+ FV+ D +HP + IY+ ++ Q++ GY P+
Sbjct: 367 RKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNT 426
Query: 519 SQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVI 578
VL VDE E++ +L+ HS+K+A+AFALI++ G+ IRI +N+R+C DCH+ + IS +
Sbjct: 427 DYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKV 486
Query: 579 YEREIIVRDRKRFHRFKDGTCSCRDYW 605
+EREI+VRD RFH F G+CSC DYW
Sbjct: 487 FEREIVVRDTNRFHHFSSGSCSCGDYW 513
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 143/290 (49%), Gaps = 8/290 (2%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++HA +K+ + + + S L+ A G MD A ++F Q++ +N LI GF
Sbjct: 61 EQIHALTVKYDWHDDVYVGSALLDMYARC--GRMDMAIAVFDQLESKNGVSWNALIAGFA 118
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ + E L ++ EM G E +FT+ ++F A A + AL++G +H H+ K G F
Sbjct: 119 RKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF 178
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V N++++MY K + A +F +D+K + +W++++ A A GL E + F EM K
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEM--RK 236
Query: 228 CWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
C I +S+L+AC+H G + GK + + + +++D+ + G L
Sbjct: 237 CGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLND 296
Query: 287 GLC-LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
L +F+M + ++ MH K + F+ L+PDD
Sbjct: 297 ALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAADHVFELDPDDT 344
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
LE+ K VHAH++K G + F + ++ A S GSM A +F +D+ +N+++
Sbjct: 158 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKS--GSMIDARKVFDHVDKKDLVTWNSML 215
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
F + EA+ + EM + GV + TF ++ AC+ +KEG Q + + E
Sbjct: 216 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLE 275
Query: 164 CDLFVQNSLINMYGKCEKVEFASA-IFKQMDQKSVASWSAIIAA 206
++ +++++ G+ + A IFK + + A W A++ +
Sbjct: 276 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGS 319
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 315/546 (57%), Gaps = 8/546 (1%)
Query: 65 CASN-LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF 123
C+ N LVA S G + A ++F ++ F ++ ++ + + AL +Y M
Sbjct: 93 CSYNTLVAALGRSPRG-LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRML 151
Query: 124 ER----GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKC 179
GV+ + FT + A + + G ++H HV + G + D V ++L +MY KC
Sbjct: 152 REPGSAGVD-NEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKC 210
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
+V+ A ++F +M + V SW+A++ + E +LF M +P E V
Sbjct: 211 GRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGI-QPNEFTYAGV 269
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
L AC + LGK HG + ++ + + E++L+ MY K G + + +FR M
Sbjct: 270 LRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDL 329
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++++ MISG A +GQ EAL F +LR G PD V +VGVLSAC+HAGLV++GL F
Sbjct: 330 VSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHS 389
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+K EY I T HY CV+DL+ R+G+ A E+I +M ++ N +W SLL ++H N+
Sbjct: 390 IKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVR 449
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+ AA+ LF+I +P+ YV L+N+YA + +V R M KG+ + P S +EV
Sbjct: 450 LARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVG 509
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
+++ F+ D+ HP + +Y ++ ++ +++ EGY D VL DV++++K++ + HS+
Sbjct: 510 TRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSE 569
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
+LA+AF +I +G+PI++ +NLR+C DCHT KLIS I +REIIVRD RFH FK+G+C
Sbjct: 570 RLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSC 629
Query: 600 SCRDYW 605
SCRDYW
Sbjct: 630 SCRDYW 635
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 331/608 (54%), Gaps = 39/608 (6%)
Query: 35 LTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
LT+ K C + K+VH ++ G + F + L+ A ++ A +F +
Sbjct: 136 LTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIH--AYGKCKCVEGARRVFDDL 193
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+ ++ +V L ++ EM GV+P++ T ++ AC++L+ LK G
Sbjct: 194 VVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGR 253
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IHG + G ++FV ++L+++Y +C V+ A +F M + V SW+ ++ A+ +N
Sbjct: 254 AIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNR 313
Query: 212 LWSECLKLFGEMN------NEKCW----------------------------RPEESILV 237
+ + L LF +M+ +E W +P + +
Sbjct: 314 EYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITIS 373
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S L AC+ L +L +GK H + R+ ++ T+L+ MY KCG L +F M+ K
Sbjct: 374 SFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRK 433
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
+ ++ MI AMHG G+E L +F ML+ G++P+ V + GVLS CSH+ LV EGL F
Sbjct: 434 DVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIF 493
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+ M ++ + P HY C+VD+ RAG L EA E IQ MP++ W +LL A +V+ N
Sbjct: 494 NSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKN 553
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E+ +I+A LF+I ++P +YV L N+ A+ W + ++ R M +G+ ++PG S ++
Sbjct: 554 VELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQ 613
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
V +V+ FV D+++ D IY + ++ ++K GY PD VL+D+D++EK E L H
Sbjct: 614 VGDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSH 673
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
S+KLA+AF +++L+ S IR+ +NLR+C DCH K +S + IIVRD RFH F++G
Sbjct: 674 SEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNG 733
Query: 598 TCSCRDYW 605
CSC+D W
Sbjct: 734 NCSCQDLW 741
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 7/286 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G A +F I +P +TLI F EA+ LY + RG++P N F +
Sbjct: 80 GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
KAC ++H + G D F+ N+LI+ YGKC+ VE A +F + K V
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCW---RPEESILVSVLSACTHLGALDLGKCT 255
SW+++ + + + GL L +F EM W +P L S+L AC+ L L G+
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMG----WNGVKPNSVTLSSILPACSELKDLKSGRAI 255
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +R+ NV V ++L+ +Y +C +++ +F +M + ++++ +++ + +
Sbjct: 256 HGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREY 315
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMK 361
+ L++FS+M +G+E D+ + V+ C G + + +M+
Sbjct: 316 DKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQ 361
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 204/563 (36%), Positives = 314/563 (55%), Gaps = 13/563 (2%)
Query: 49 KVHAHVLKWGFF-WNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNTLIR 104
++HA L++G+ +PF V+ A+ + G + A +F ++ +N ++
Sbjct: 134 QIHALALRFGYLPGDPF-----VSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMT 188
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + E Y + E G P+ + A F ACA L G Q HG V GF+
Sbjct: 189 NAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDM 248
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF-GEM 223
D+ V N++++ YGKC A A+F M ++ SW ++I A+A +G + L ++ G
Sbjct: 249 DVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGAR 308
Query: 224 NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGC 283
N + P + ++ SVL+ C L L+ G+ H +R+ N+ V ++L+DMY KCG
Sbjct: 309 NTGE--EPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGG 366
Query: 284 LEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLS 342
+E +F M ++ +T++ MI G A G + AL++F M+R G P+ + V V++
Sbjct: 367 VEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVIT 426
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACS GL +G FD M+ + + P +HY CVVDL+GRAGM A E+IQ MP++ +
Sbjct: 427 ACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSI 486
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
VW +LL A K+H E+G IA++ LF+++ ++VLLSNM A A RW + +R EM
Sbjct: 487 SVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEM 546
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
+ G+ + PG S + V+ F ++D H I ++ +++ Q++ GY PD L
Sbjct: 547 KNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSL 606
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DV+E+EK + HS+KLA+AF LIH+ PIRI +NLR+C DCH K +S I RE
Sbjct: 607 YDVEEEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGRE 666
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFH FK CSC+DYW
Sbjct: 667 IIVRDNNRFHYFKQFECSCKDYW 689
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 152/326 (46%), Gaps = 14/326 (4%)
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK--ACAKLQALKEG 150
P F I G + AL + M G+ P++FTFP+ FK ACA + G
Sbjct: 73 NPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVG 132
Query: 151 MQIHGHVFKVGF-ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
QIH + G+ D FV + ++MY K + A +F++M ++V +W+A++
Sbjct: 133 PQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVI 192
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+G E K + + E P + + +AC L LG+ HG ++ ++V
Sbjct: 193 DGRPLETFKAYFGL-REAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVS 251
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +++D Y KC C K +F M + +++ MI A HG ++AL+++ G
Sbjct: 252 VSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTG 311
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDR----MKLEYRIVPTVQHYGCVVDLMGRAGM 385
EP D + VL+ C AGL+ L F R + + I + +VD+ G+ G
Sbjct: 312 EEPTDFMVSSVLTTC--AGLLG---LNFGRALHAVAVRSCIDANIFVASALVDMYGKCGG 366
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSA 411
+ +A ++ MP ++N V W +++
Sbjct: 367 VEDAEQVFLDMP-ERNLVTWNAMIGG 391
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 71/169 (42%), Gaps = 16/169 (9%)
Query: 251 LGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGL 309
LG+ H +R +S L + L+++Y K + ++++ ISG
Sbjct: 27 LGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGA 86
Query: 310 AMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA-------CSHAGLVNEGLLCFDRMKL 362
A H + ALS F+ MLR GL P+D + A CS G L L
Sbjct: 87 AQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHAL------AL 140
Query: 363 EYRIVPTVQHYGC-VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+ +P C +D+ + G LG A L + MP +N + W ++++
Sbjct: 141 RFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMP-NRNVIAWNAVMT 188
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 122/312 (39%), Gaps = 8/312 (2%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
A F+A ++ + G H ++ F+ L+N+Y K + A++
Sbjct: 14 AAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPN 73
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL--SACTHLGALDLG 252
+V S++A I+ A + L F M RP + S +AC +G
Sbjct: 74 PTVVSFTAFISGAAQHARPLAALSAFAAMLRVG-LRPNDFTFPSAFKAAACAPPRCSTVG 132
Query: 253 KCTHGSLIR-NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAM 311
H +R + V + +DMY K GCL LF M ++ + ++ +++ +
Sbjct: 133 PQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVI 192
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQ 371
G+ E + + G P+ V +AC+ A ++ G F + V
Sbjct: 193 DGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQ-FHGFVVTCGFDMDVS 251
Query: 372 HYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
+VD G+ G+A + M + +N V W S++ A H E +A +
Sbjct: 252 VSNAMVDFYGKCRCAGKARAVFDGMRV-RNSVSWCSMIVA-YAQHGAEEDALAVYMGARN 309
Query: 432 NSHHPSDYVLLS 443
P+D+++ S
Sbjct: 310 TGEEPTDFMVSS 321
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 296/517 (57%), Gaps = 41/517 (7%)
Query: 126 GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA 185
G P+ +TF +FKAC + EG QI H K+G E +LFV N++I MY V+ A
Sbjct: 27 GFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEA 86
Query: 186 SAIFK-------------------------------QMDQKSVASWSAIIAAHASNGLWS 214
+F +M ++ V SW+ IIA + G +
Sbjct: 87 RRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFK 146
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSL 274
E L LF EM P E L S L+AC +L ALD G+ H + ++ +N + SL
Sbjct: 147 EALDLFHEMLQTGP-PPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASL 205
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAMHGQGKEALSIFSEMLREG 329
+DMY KCG ++ +F D+ L ++ MI G AMHG+ KEA+ +F +M E
Sbjct: 206 LDMYAKCGEIDFAAKVFH---DEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEK 262
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+ V +V +L+ACSH LV EG F M Y I P ++HYGC+VDL+GR+G+L EA
Sbjct: 263 VSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEA 322
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E + +MP+ + +W +LL A ++H ++E G+ K + +++S H +VLL+N+Y+ +
Sbjct: 323 EETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSAS 382
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W + +R ++ G ++PG S +E+ ++F+ DRSHP +Y + +M +L
Sbjct: 383 GQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQLYLFLDEMTTKL 442
Query: 510 KFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
K GY P+ +VL D+D++E +E L HS+KLAIAF LI+ G+ IRI +NLR+C DC
Sbjct: 443 KNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPGTAIRIVKNLRVCADC 502
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H TK IS +Y+REIIVRDR R+H FKDG CSC+DYW
Sbjct: 503 HEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 46/273 (16%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ E + T+I G+V+ F+EAL L++EM + G P+ FT +
Sbjct: 112 GEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASAL 171
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD--QKS 196
ACA L AL +G IH ++ K + + + SL++MY KC +++FA+ +F +
Sbjct: 172 AACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK 231
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
V W+A+I +A +G E + LF +M EK P + V++L+A C+H
Sbjct: 232 VWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKV-SPNKVTFVALLNA-----------CSH 279
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT-----YSVMISGLAM 311
G L+ E+G F+ MA + Y M+ L
Sbjct: 280 GKLV------------------------EEGRGYFKSMASSYGIEPEIEHYGCMVDLLGR 315
Query: 312 HGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
G KEA M + PD ++ +L AC
Sbjct: 316 SGLLKEAEETVFNM---PMAPDATIWGALLGAC 345
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 299/528 (56%), Gaps = 3/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G+++ A F + ++ +I + + + E+A L+ M V P+ F+ ++
Sbjct: 681 GNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVL 740
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ACA + L G QIH H K+G E +LFV N+LI++Y KC +E + IF + +
Sbjct: 741 QACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEV 800
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVS-VLSACTHLGALDLGKCTHG 257
SW+ II ++ +G L +F EM P + S VL AC +++ H
Sbjct: 801 SWNTIIVGYSKSGFGEAALSVFREMRAASV--PSTQVTYSSVLRACASTASINHVGQVHC 858
Query: 258 SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKE 317
+ ++ + IV SLID Y KCGC+ +F + + ++++ +ISG A+HGQ
Sbjct: 859 LIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAM 918
Query: 318 ALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
A +F M + ++ +D+ +V +LS C GLV++GL FD M+L++ I P+++HY C+V
Sbjct: 919 AQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIV 978
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
L+GRAG L +AL I +P + +VWR+LLS+ VH N+E+G +A+ + +I +
Sbjct: 979 RLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDET 1038
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLLSNMY+ A VA R M + G+ + PG S VE+ +V+ F HP
Sbjct: 1039 TYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRV 1098
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
I M+ + + EGY PD +VL D++E++K L HS++LA+A+ L+ G PIR
Sbjct: 1099 INAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIR 1158
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR C DCH K+IS I ++EIIVRD RFH F++GTCSC DYW
Sbjct: 1159 IMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDYW 1206
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 171/365 (46%), Gaps = 9/365 (2%)
Query: 48 KKVHAHVLKWGFF--WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
+ VH HV++ G + FCA+ L+ + G A +F + E F TL++G
Sbjct: 448 RAVHGHVVRSGGLARLDLFCANVLLNM--YTKVGPFGSAHRVFDGLPERNMVSFVTLVQG 505
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
EFEEA L+ + G E + F + K + L +H K+G + +
Sbjct: 506 HALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRN 565
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
FV ++LI+ Y C V A +F + K +W+A+++ ++ N L++F +M
Sbjct: 566 AFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMR- 624
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
+ L SVL A L ++ LGK H ++ + V +L+DMY KCG +E
Sbjct: 625 VAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIE 684
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
F M+ + + +S+MIS A Q ++A +F M+R + P++ VL AC+
Sbjct: 685 DARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACA 744
Query: 346 HAGLVNEGLLCFDR-MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+ L++ G + +K+ + V + ++DL + + +LE+ S+ N+V
Sbjct: 745 NMPLLDLGKQIHNHAIKIGHESELFVGN--ALIDLYAKCSDMESSLEIFSSLR-DVNEVS 801
Query: 405 WRSLL 409
W +++
Sbjct: 802 WNTII 806
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 17/289 (5%)
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVG--FECDLFVQNSLINMYGKCEKVEFASA 187
D++ + L + C + G +HGHV + G DLF N L+NMY K A
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES---ILVSVLSACT 244
+F + ++++ S+ ++ HA G + E LF + W E +L +VL
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR----WEGHEVNQFVLTTVLKLVV 542
Query: 245 HLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSV 304
+ L L H + N V ++LID Y CG + +F + K + ++
Sbjct: 543 AMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTA 602
Query: 305 MISGLAMHGQGKEALSIFSEM--LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
M+S + + + L IFS+M L P + V + C + ++ +G+ +K
Sbjct: 603 MVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACS-VKT 661
Query: 363 EYRIVPTVQH-YGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
Y T +H YG ++D+ + G + +A L M + ++W ++S
Sbjct: 662 LYD---TERHVYGALLDMYAKCGNIEDA-RLAFEMVTNDDVILWSLMIS 706
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 197/563 (34%), Positives = 319/563 (56%), Gaps = 4/563 (0%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
E+ + +H V+ G F+N + LV+ G M + + Q+ +N LI
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSM--YGKIGEMSESRRVLLQMPRRDVVAWNALI 435
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA-KLQALKEGMQIHGHVFKVGF 162
G+ ++ + ++AL + M GV + T ++ AC L+ G +H ++ GF
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGF 495
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
E D V+NSLI MY KC + + +F +D +++ +W+A++AA+A +G E LKL +
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M + + S LSA L L+ G+ HG ++ + + + DMY KCG
Sbjct: 556 MRSFGVSLDQFS-FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 614
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLS 342
+ + + + ++ +++++IS L HG +E + F EML G++P V +V +L+
Sbjct: 615 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 674
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACSH GLV++GL +D + ++ + P ++H CV+DL+GR+G L EA I MP++ ND
Sbjct: 675 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 734
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+VWRSLL++ K+H NL+ G AA+NL ++ S YVL SNM+A RW DV +R +M
Sbjct: 735 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 794
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
K + + S V++ KV F DR+HP IY + ++ +K GY D SQ L
Sbjct: 795 GFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL 854
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
+D DE++K L HS++LA+A+AL+ +GS +RI +NLR+C+DCH+ K +S + R
Sbjct: 855 QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRR 914
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
I++RD+ RFH F+ G CSC+DYW
Sbjct: 915 IVLRDQYRFHHFERGLCSCKDYW 937
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 175/375 (46%), Gaps = 19/375 (5%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
E +VH V K G + + ++ ++ + +G + + +F ++ + + +L+
Sbjct: 75 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGV--YGLVSCSRKVFEEMPDRNVVSWTSLM 132
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G+ + E EE + +Y M GV + + + +C L+ G QI G V K G E
Sbjct: 133 VGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE 192
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
L V+NSLI+M G V++A+ IF QM ++ SW++I AA+A NG E ++F M
Sbjct: 193 SKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Query: 224 N--NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC 281
+++ S L+SVL H+ G+ HG +++ V V +L+ MY
Sbjct: 253 RRFHDEVNSTTVSTLLSVLG---HVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 309
Query: 282 GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
G + +F+ M K ++++ +++ G+ +AL + M+ G + V + L
Sbjct: 310 GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSAL 369
Query: 342 SACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY-----GCVVDLMGRAGMLGEALELIQSM 396
+AC +G + L +V + Y +V + G+ G + E+ ++ M
Sbjct: 370 AACFTPDFFEKGRI------LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 397 PIQQNDVVWRSLLSA 411
P +++ V W +L+
Sbjct: 424 P-RRDVVAWNALIGG 437
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 180/387 (46%), Gaps = 8/387 (2%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L++L + + + +H V+K GF + C N + S++ A +F+Q+
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFD-SVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTK 325
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIH 154
+N+L+ FV + +AL L M G + TF + AC ++G +H
Sbjct: 326 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 385
Query: 155 GHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWS 214
G V G + + N+L++MYGK ++ + + QM ++ V +W+A+I +A +
Sbjct: 386 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD 445
Query: 215 ECLKLFGEMNNEKCWRPEESILVSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETS 273
+ L F M E +VSVLSAC G L+ GK H ++ + V+ S
Sbjct: 446 KALAAFQTMRVEGV-SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNS 504
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LI MY KCG L LF + ++ +T++ M++ A HG G+E L + S+M G+ D
Sbjct: 505 LITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLD 564
Query: 334 DVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ LSA + ++ EG L +KL + + + D+ + G +GE +++
Sbjct: 565 QFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI--FNAAADMYSKCGEIGEVVKM 622
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ + ++ W L+SA H E
Sbjct: 623 LPP-SVNRSLPSWNILISALGRHGYFE 648
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 167/346 (48%), Gaps = 22/346 (6%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
+ +G + A +F + +NT++ G V+ + E + + +M + G++P +F
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62
Query: 136 ALFKACAKLQAL-KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQ 194
+L AC + ++ +EG+Q+HG V K G D++V +++++YG V + +F++M
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 195 KSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKC 254
++V SW++++ ++ G E + ++ M E E S+ + V+S+C L LG+
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL-VISSCGLLKDESLGRQ 181
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
G ++++ + VE SLI M G ++ +F M+++ ++++ + + A +G
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 315 GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
+E+ IFS M R E + +LS H D K I V G
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV----------DHQKWGRGIHGLVVKMG 291
Query: 375 -----CVVDLMGR----AGMLGEALELIQSMPIQQNDVVWRSLLSA 411
CV + + R AG EA + + MP ++ + W SL+++
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 336
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 122/255 (47%), Gaps = 22/255 (8%)
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
MY K +V+ A +F M ++ SW+ +++ GL+ E ++ F +M + +P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGI-KPSSF 59
Query: 235 ILVSVLSACTHLGAL-DLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
++ S+++AC G++ G HG + ++ +V V T+++ +Y G + +F
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M D+ ++++ ++ G + G+ +E + I+ M EG+ ++ V+S+C GL+ +
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKD- 175
Query: 354 LLCFDRMKLEYRIVPTVQHYG---------CVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
L +I+ V G ++ ++G G + A + M +++ +
Sbjct: 176 ------ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTIS 228
Query: 405 WRSLLSASKVHHNLE 419
W S+ +A + ++E
Sbjct: 229 WNSIAAAYAQNGHIE 243
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,075,570,492
Number of Sequences: 23463169
Number of extensions: 357942896
Number of successful extensions: 1364656
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9999
Number of HSP's successfully gapped in prelim test: 1542
Number of HSP's that attempted gapping in prelim test: 1215933
Number of HSP's gapped (non-prelim): 52404
length of query: 605
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 456
effective length of database: 8,863,183,186
effective search space: 4041611532816
effective search space used: 4041611532816
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 80 (35.4 bits)