BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007396
(605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/608 (59%), Positives = 477/608 (78%), Gaps = 5/608 (0%)
Query: 1 MTRTSVLHQSLLLTQPEEPPKGPELN-LRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF 59
M + +L QSLL ++ ++ PE+N KEQECL +LK C N++EFK+VHA +K
Sbjct: 1 MIKAPIL-QSLLASR-DDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSL 58
Query: 60 FWNPFCASNLV-ATCALSHW-GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALF 117
F++ +++ V A CA S W SM+YA SIFR ID+P FDFNT+IRG+V + FEEAL
Sbjct: 59 FYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALC 118
Query: 118 LYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYG 177
YNEM +RG EPDNFT+P L KAC +L++++EG QIHG VFK+G E D+FVQNSLINMYG
Sbjct: 119 FYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYG 178
Query: 178 KCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
+C ++E +SA+F++++ K+ ASWS++++A A G+WSECL LF M +E + EES +V
Sbjct: 179 RCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMV 238
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
S L AC + GAL+LG HG L+RNIS LN+IV+TSL+DMYVKCGCL+K L +F+ M +
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
LTYS MISGLA+HG+G+ AL +FS+M++EGLEPD VVYV VL+ACSH+GLV EG F
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 358 DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
M E ++ PT +HYGC+VDL+GRAG+L EALE IQS+PI++NDV+WR+ LS +V N
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQN 418
Query: 418 LEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVE 477
+E+G+IAA+ L +++SH+P DY+L+SN+Y++ Q W DVA+ RTE+A KGL Q+PGFS+VE
Sbjct: 419 IELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVE 478
Query: 478 VARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGH 537
+ K ++FVSQDRSHP IY+M+HQMEWQLKFEGYSPD++Q+L +VDE+EK+ERLKGH
Sbjct: 479 LKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGH 538
Query: 538 SQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDG 597
SQK+AIAF L++ GS I+IARNLRMC+DCHTYTK IS+IYEREI+VRDR RFH FK G
Sbjct: 539 SQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGG 598
Query: 598 TCSCRDYW 605
TCSC+DYW
Sbjct: 599 TCSCKDYW 606
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 247/581 (42%), Positives = 364/581 (62%), Gaps = 8/581 (1%)
Query: 32 QECLTILKT--CKNLEEFKKVHAHVLKWGF-FWNPFCASNLV-ATCALSHWGSMDYACSI 87
++C+ +L+T ++ + +++HA ++ G + +L+ +L M YA +
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKV 75
Query: 88 FRQIDEP-GAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKLQ 145
F +I++P F +NTLIRG+ + A LY EM G VEPD T+P L KA +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
++ G IH V + GF ++VQNSL+++Y C V A +F +M +K + +W+++I
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 206 AHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA 265
A NG E L L+ EMN+ K +P+ +VS+LSAC +GAL LGK H +I+
Sbjct: 196 GFAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 254
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
N+ L+D+Y +CG +E+ LF M DK ++++ +I GLA++G GKEA+ +F M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 326 -LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
EGL P ++ +VG+L ACSH G+V EG F RM+ EY+I P ++H+GC+VDL+ RAG
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 374
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSN 444
+ +A E I+SMP+Q N V+WR+LL A VH + ++ E A + Q+ +H DYVLLSN
Sbjct: 375 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 434
Query: 445 MYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQ 504
MYA QRW DV KIR +M G+ + PG SLVEV +V++F+ D+SHP D IY + +
Sbjct: 435 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKE 494
Query: 505 MEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
M +L+ EGY P IS V DV+E+EK + HS+K+AIAF LI + SPI + +NLR+
Sbjct: 495 MTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRV 554
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH KL+S +Y REI+VRDR RFH FK+G+CSC+DYW
Sbjct: 555 CADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/606 (38%), Positives = 350/606 (57%), Gaps = 34/606 (5%)
Query: 33 ECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS-MDYACSIFRQI 91
E ++ L+ C EE K++HA +LK G + + + ++ C S + YA +F
Sbjct: 16 ETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D P F +N +IRGF E E +L LY M + +TFP+L KAC+ L A +E
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYG-------------------------------KCE 180
QIH + K+G+E D++ NSLIN Y K
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVL 240
K++ A +F++M +K+ SW+ +I+ + + E L+LF EM N P+ L + L
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV-EPDNVSLANAL 254
Query: 241 SACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQL 300
SAC LGAL+ GK H L + ++ ++ LIDMY KCG +E+ L +F+ + K
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 314
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRM 360
++ +ISG A HG G+EA+S F EM + G++P+ + + VL+ACS+ GLV EG L F M
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 361 KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEI 420
+ +Y + PT++HYGC+VDL+GRAG+L EA IQ MP++ N V+W +LL A ++H N+E+
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 421 GEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVAR 480
GE + L I+ +H YV +N++A ++W A+ R M +G+ + PG S + +
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEG 494
Query: 481 KVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRD-VDEDEKRERLKGHSQ 539
++F++ DRSHP + I M +L+ GY P++ ++L D VD+DE+ + HS+
Sbjct: 495 TTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSE 554
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLAI + LI G+ IRI +NLR+C DCH TKLIS IY+R+I++RDR RFH F+DG C
Sbjct: 555 KLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKC 614
Query: 600 SCRDYW 605
SC DYW
Sbjct: 615 SCGDYW 620
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 237/619 (38%), Positives = 361/619 (58%), Gaps = 53/619 (8%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALS--HWGSMDYACSIFRQIDEPG 95
+ C+ + + ++HA +K G + A+ ++ CA S H +DYA IF Q+ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 96 AFDFNTLIRGFVKEVEFEEAL----FLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
F +NT+IRGF E + ++AL Y M + VEP+ FTFP++ KACAK ++EG
Sbjct: 90 CFSWNTIIRGF-SESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKC-----EKVEF---------------------- 184
QIHG K GF D FV ++L+ MY C +V F
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 185 ------------------ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNE 226
A +F +M Q+SV SW+ +I+ ++ NG + + +++F EM
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 227 KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
RP LVSVL A + LG+L+LG+ H + ++ ++ ++LIDMY KCG +EK
Sbjct: 269 DI-RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+ +F + + +T+S MI+G A+HGQ +A+ F +M + G+ P DV Y+ +L+ACSH
Sbjct: 328 AIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSH 387
Query: 347 AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWR 406
GLV EG F +M + P ++HYGC+VDL+GR+G+L EA E I +MPI+ +DV+W+
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 407 SLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKG 466
+LL A ++ N+E+G+ A L + H YV LSNMYA W +V+++R M K
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKD 507
Query: 467 LNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVD 526
+ + PG SL+++ +++FV +D SHP I M+ ++ +L+ GY P +QVL +++
Sbjct: 508 IRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLE 567
Query: 527 EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVR 586
E++K L HS+K+A AF LI S G PIRI +NLR+C DCH+ KLIS +Y+R+I VR
Sbjct: 568 EEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVR 627
Query: 587 DRKRFHRFKDGTCSCRDYW 605
DRKRFH F+DG+CSC DYW
Sbjct: 628 DRKRFHHFQDGSCSCMDYW 646
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 139/331 (41%), Gaps = 55/331 (16%)
Query: 137 LFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE----KVEFASAIFKQM 192
LF + +++ QIH K G D ++ + +++A IF QM
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 193 DQKSVASWSAIIAAHASNGLWSE--CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALD 250
Q++ SW+ II + + + LF EM +++ P SVL AC G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 251 LGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF------------------- 291
GK HG ++ + V ++L+ MYV CG ++ LF
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 292 ----------------------RMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEM 325
RM+ DK + ++++ MISG +++G K+A+ +F EM
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAG 384
+ + P+ V V VL A S G + G L RI + ++D+ + G
Sbjct: 266 KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG--SALIDMYSKCG 323
Query: 385 MLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
++ +A+ + + +P ++N + W ++++ +H
Sbjct: 324 IIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 240/594 (40%), Positives = 357/594 (60%), Gaps = 24/594 (4%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNP---FCASNLVATCALSHWGSMDYACSIF 88
Q ++ +TC ++ + K++HA L+ + P F ++ S + ++YA +F
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVF 106
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQA 146
I+ +F +NTLIR +V EEA LY +M ERG PD TFP + KACA +
Sbjct: 107 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
EG Q+H + K GF D++V N LI++YG C ++ A +F +M ++S+ SW+++I A
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 226
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS-- 264
G + L+LF EM ++ + P+ + SVLSAC LG+L LG H L+R
Sbjct: 227 LVRFGEYDSALQLFREM--QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
A++V+V+ SLI+MY KCG L +F+ M + +++ MI G A HG+ +EA++ F
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 324 EML--REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
M+ RE + P+ V +VG+L AC+H G VN+G FD M +Y I P ++HYGC+VDL+
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIA 404
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSAS-KVHHNLEIGEIAAKNLFQINSHHPSD-- 438
RAG + EA++++ SMP++ + V+WRSLL A K ++E+ E A+N+ + S
Sbjct: 405 RAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNG 464
Query: 439 -----YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
YVLLS +YA A RW DV +R M+ G+ + PG S +E+ ++F + D SHP
Sbjct: 465 NCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHP 524
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQV-LRDVDEDEKRE-RLKGHSQKLAIAFALIHLS 551
IY+ + ++ +L+ GY PD SQ L D D +E L+ HS++LAIAF LI+L
Sbjct: 525 QTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLP 584
Query: 552 QGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+PIRI +NLR+CNDCH TKLIS ++ EIIVRDR RFH FKDG+CSC DYW
Sbjct: 585 PQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/568 (40%), Positives = 342/568 (60%), Gaps = 7/568 (1%)
Query: 43 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTL 102
+L + +VH H+L G +PF A+ L+ S GS+DYA +F + + + +N L
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGM--YSDLGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 103 IRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA----KLQALKEGMQIHGHVF 158
R EE L LY +M GVE D FT+ + KAC + L +G +IH H+
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLK 218
+ G+ +++ +L++MY + V++AS +F M ++V SWSA+IA +A NG E L+
Sbjct: 210 RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALR 269
Query: 219 LFGEMNNE-KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F EM E K P +VSVL AC L AL+ GK HG ++R + V ++L+ M
Sbjct: 270 TFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTM 329
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y +CG LE G +F M D+ ++++ +IS +HG GK+A+ IF EML G P V +
Sbjct: 330 YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTF 389
Query: 338 VGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMP 397
V VL ACSH GLV EG F+ M ++ I P ++HY C+VDL+GRA L EA +++Q M
Sbjct: 390 VSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMR 449
Query: 398 IQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAK 457
+ VW SLL + ++H N+E+ E A++ LF + + +YVLL+++YA AQ W +V +
Sbjct: 450 TEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKR 509
Query: 458 IRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPD 517
++ + +GL + PG +EV RK+Y FVS D +P + I+ + ++ +K +GY P
Sbjct: 510 VKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQ 569
Query: 518 ISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISV 577
VL +++ +EK + GHS+KLA+AF LI+ S+G PIRI +NLR+C DCH +TK IS
Sbjct: 570 TKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISK 629
Query: 578 IYEREIIVRDRKRFHRFKDGTCSCRDYW 605
E+EI+VRD RFHRFK+G CSC DYW
Sbjct: 630 FMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 153/326 (46%), Gaps = 21/326 (6%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N LI+ KE + ++A+ + + P T+ L C +L + +++H H+
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
G + D F+ LI MY V++A +F + ++++ W+A+ A G E L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 220 FGEMNNEKCWRPEESILVSVLSACT----HLGALDLGKCTHGSLIRNISALNVIVETSLI 275
+ +MN + VL AC + L GK H L R + +V + T+L+
Sbjct: 166 YWKMNRIGV-ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE--PD 333
DMY + GC++ +F M + +++S MI+ A +G+ EAL F EM+RE + P+
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPN 284
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
V V VL AC+ + +G L R L+ I+P + +V + GR G L
Sbjct: 285 SVTMVSVLQACASLAALEQGKLIHGYILRRGLD-SILPVIS---ALVTMYGRCGKLEVGQ 340
Query: 391 ELIQSMPIQQNDVV-WRSLLSASKVH 415
+ M DVV W SL+S+ VH
Sbjct: 341 RVFDRM--HDRDVVSWNSLISSYGVH 364
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 122/224 (54%), Gaps = 5/224 (2%)
Query: 32 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+ C+ T +L + K++HAH+ + G+ + + + LV A +G +DYA +F +
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA--RFGCVDYASYVFGGM 243
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE--RGVEPDNFTFPALFKACAKLQALKE 149
++ +I + K + EAL + EM + P++ T ++ +ACA L AL++
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G IHG++ + G + L V ++L+ MYG+C K+E +F +M + V SW+++I+++
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
+G + +++F EM P VSVL AC+H G ++ GK
Sbjct: 364 HGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHEGLVEEGK 406
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/616 (36%), Positives = 350/616 (56%), Gaps = 37/616 (6%)
Query: 26 NLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGS----- 80
LR K + L +L++C + + K +H +L+ + F AS L+A C +
Sbjct: 8 TLRFKHPK-LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL 66
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+ YA IF QI P F FN LIR F E +A Y +M + + PDN TFP L KA
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA 126
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
++++ + G Q H + + GF+ D++V+NSL++MY C + A IF QM + V SW
Sbjct: 127 SSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSW 186
Query: 201 SAIIAAHASNGLWSECLKLFGEM--NNEKCWR---------------------------- 230
++++A + G+ ++F EM N W
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
E+++VSV+S+C HLGAL+ G+ + ++++ +N+I+ T+L+DM+ +CG +EK + +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + + L++S +I GLA+HG +A+ FS+M+ G P DV + VLSACSH GLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+GL ++ MK ++ I P ++HYGC+VD++GRAG L EA I M ++ N + +LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A K++ N E+ E L ++ H YVLLSN+YA A +W + +R M K + +
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 471 PGFSLVEVARKVYKF-VSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDE 529
PG+SL+E+ K+ KF + D+ HP I ++ +++ GY + DVDE+E
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEE 546
Query: 530 KRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRK 589
K + HS+KLAIA+ ++ G+ IRI +NLR+C DCHT TKLIS +Y RE+IVRDR
Sbjct: 547 KESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRN 606
Query: 590 RFHRFKDGTCSCRDYW 605
RFH F++G CSCRDYW
Sbjct: 607 RFHHFRNGVCSCRDYW 622
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/525 (39%), Positives = 321/525 (61%), Gaps = 1/525 (0%)
Query: 81 MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKA 140
+D +F + +NT+I G+ + +E+AL + EM ++PD+FT ++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 141 CAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASW 200
++ + +G +IHG+V + G + D+++ +SL++MY K ++E + +F ++ + SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 201 SAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLI 260
++++A + NG ++E L+LF +M K +P SV+ AC HL L LGK HG ++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKV-KPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 261 RNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALS 320
R N+ + ++L+DMY KCG ++ +F M +++++ +I G A+HG G EA+S
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 321 IFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLM 380
+F EM R+G++P+ V +V VL+ACSH GLV+E F+ M Y + ++HY V DL+
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 381 GRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYV 440
GRAG L EA I M ++ VW +LLS+ VH NLE+ E A+ +F ++S + YV
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 441 LLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYE 500
L+ NMYA RW ++AK+R M KGL + P S +E+ K + FVS DRSHP+ D I E
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 501 MIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIAR 560
+ + Q++ EGY D S VL DVDE+ KRE L GHS++LA+AF +I+ G+ IR+ +
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 670
Query: 561 NLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
N+R+C DCH K IS I EREIIVRD RFH F G CSC DYW
Sbjct: 671 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 172/364 (47%), Gaps = 39/364 (10%)
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F+ + P + ++IR F + F +AL + EM G PD+ FP++ K+C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKC-------------------------EKV 182
+ G +HG + ++G +CDL+ N+L+NMY K E V
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 183 EFASAI-----------FKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
+ + I F+ M +K V S++ IIA +A +G++ + L++ EM +P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL-KP 240
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
+ L SVL + + GK HG +IR +V + +SL+DMY K +E +F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ + ++++ +++G +G+ EAL +F +M+ ++P V + V+ AC+H ++
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 352 EGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
G + L + +VD+ + G + A ++ M + ++V W +++
Sbjct: 361 LGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMG 418
Query: 412 SKVH 415
+H
Sbjct: 419 HALH 422
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++ C +L K++H +VL+ GF N F AS LV S G++ A IF +++
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM--YSKCGNIKAARKIFDRMN 405
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G EA+ L+ EM +GV+P+ F A+ AC+ + + E
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 153 IHGHVFKV-GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS-WSAIIAA 206
+ KV G +L ++ ++ G+ K+E A +M + S WS ++++
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 40/243 (16%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L K ++++ + Q+H + + +I++Y + + A +FK +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMN-NEKCWRPEESILVSVLSACTHLGALDLGKC 254
V +W ++I L+S+ L F EM + +C P+ ++ SVL +CT + L G+
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRC--PDHNVFPSVLKSCTMMMDLRFGES 126
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLC------------------------- 289
HG ++R ++ +L++MY K + +
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 290 -----------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYV 338
+F +M K ++Y+ +I+G A G ++AL + EM L+PD
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 339 GVL 341
VL
Sbjct: 247 SVL 249
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/579 (38%), Positives = 348/579 (60%), Gaps = 4/579 (0%)
Query: 29 LKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW-GSMDYACSI 87
+ Q + ++ C +L E ++ A+ +K F A L+ C S SM YA +
Sbjct: 27 VNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHL 85
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F + EP FN++ RG+ + E L+ E+ E G+ PDN+TFP+L KACA +AL
Sbjct: 86 FEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKAL 145
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+EG Q+H K+G + +++V +LINMY +CE V+ A +F ++ + V ++A+I +
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGY 205
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
A +E L LF EM K +P E L+SVLS+C LG+LDLGK H ++
Sbjct: 206 ARRNRPNEALSLFREMQG-KYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKY 264
Query: 268 VIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR 327
V V T+LIDM+ KCG L+ + +F M K +S MI A HG+ ++++ +F M
Sbjct: 265 VKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 328 EGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLG 387
E ++PD++ ++G+L+ACSH G V EG F +M ++ IVP+++HYG +VDL+ RAG L
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+A E I +PI ++WR LL+A H+NL++ E ++ +F+++ H DYV+LSN+YA
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 448 RAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEW 507
R ++W V +R M + + PG S +EV V++F S D A ++ + +M
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 508 QLKFEGYSPDISQVLR-DVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCN 566
+LK GY PD S V+ ++++ EK L+ HS+KLAI F L++ G+ IR+ +NLR+C
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 567 DCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH KLIS+I+ R++++RD +RFH F+DG CSC D+W
Sbjct: 565 DCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/611 (36%), Positives = 352/611 (57%), Gaps = 34/611 (5%)
Query: 28 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
R+ + + +L + +E +++HA + G + + V ALS +DYA I
Sbjct: 3 RIGKHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQI 62
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG--VEPDNFTFPALFKACAKLQ 145
+ ++P F N++IR K E++ Y + G ++PDN+T L +AC L+
Sbjct: 63 LDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLR 122
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMY----------------------------- 176
+ G+Q+HG + GF+ D VQ LI++Y
Sbjct: 123 MRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVT 182
Query: 177 --GKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEES 234
+C V FA +F+ M ++ +W+A+I+ +A G E L +F M E +
Sbjct: 183 ACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-KVNGV 241
Query: 235 ILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMM 294
++SVLSACT LGALD G+ H + RN + V + T+L+D+Y KCG +EK + +F M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 295 ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGL 354
+K T+S ++GLAM+G G++ L +FS M ++G+ P+ V +V VL CS G V+EG
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 355 LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKV 414
FD M+ E+ I P ++HYGC+VDL RAG L +A+ +IQ MP++ + VW SLL AS++
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 415 HHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS 474
+ NLE+G +A+K + ++ + + YVLLSN+YA + W +V+ +R M SKG+ + PG S
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 475 LVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERL 534
++EV +V++F D+SHP + I + + +L+ GY D + V+ D+DE+EK + L
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDAL 541
Query: 535 KGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF 594
HS+K AIAF ++ L + PIRI +NLR+C DCH + +IS I+ REIIVRDR RFH F
Sbjct: 542 CLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHF 601
Query: 595 KDGTCSCRDYW 605
KDG CSC +W
Sbjct: 602 KDGHCSCNGFW 612
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/530 (38%), Positives = 328/530 (61%)
Query: 76 SHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
S G +D A ++FR++ + + ++I G+ +E EA+ L+ EM E G+ PD +T
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
A+ CA+ + L EG ++H + + D+FV N+L++MY KC ++ A +F +M K
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ SW+ II ++ N +E L LF + EK + P+E + VL AC L A D G+
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG ++RN + V SL+DMY KCG L LF +A K ++++VMI+G MHG G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
KEA+++F++M + G+E D++ +V +L ACSH+GLV+EG F+ M+ E +I PTV+HY C
Sbjct: 582 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 641
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH 435
+VD++ R G L +A I++MPI + +W +LL ++HH++++ E A+ +F++ +
Sbjct: 642 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 701
Query: 436 PSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAW 495
YVL++N+YA A++W V ++R + +GL ++PG S +E+ +V FV+ D S+P
Sbjct: 702 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPET 761
Query: 496 DNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSP 555
+NI + ++ ++ EGYSP L D +E EK E L GHS+KLA+A +I G
Sbjct: 762 ENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKI 821
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH K +S + REI++RD RFH+FKDG CSCR +W
Sbjct: 822 IRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 196/379 (51%), Gaps = 8/379 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C K+L++ K+V + GF + S L + ++ G + A +F ++
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKL--SLMYTNCGDLKEASRVFDEVK 156
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
A +N L+ K +F ++ L+ +M GVE D++TF + K+ + L+++ G Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG + K GF V NSL+ Y K ++V+ A +F +M ++ V SW++II + SNGL
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ L +F +M + + +VSV + C + LG+ H ++ +
Sbjct: 277 AEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+DMY KCG L+ +FR M+D+ ++Y+ MI+G A G EA+ +F EM EG+ P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D VL+ C+ L++EG + +K E + + ++D+ + G + EA EL
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIK-ENDLGFDIFVSNALMDMYAKCGSMQEA-EL 453
Query: 393 IQSMPIQQNDVVWRSLLSA 411
+ S ++ + W +++
Sbjct: 454 VFSEMRVKDIISWNTIIGG 472
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 160/307 (52%), Gaps = 4/307 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +LK GF ++LVA + +D A +F ++ E +N++I G+V
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQ--RVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
E+ L ++ +M G+E D T ++F CA + + G +H K F +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
N+L++MY KC ++ A A+F++M +SV S++++IA +A GL E +KLF EM E
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
P+ + +VL+ C LD GK H + N ++ V +L+DMY KCG +++
Sbjct: 393 I-SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSH 346
+F M K ++++ +I G + + EALS+F+ +L E PD+ VL AC+
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 347 AGLVNEG 353
++G
Sbjct: 512 LSAFDKG 518
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 148/329 (44%), Gaps = 33/329 (10%)
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHV 157
D NT +R F + E A+ L + ++P T ++ + CA ++LK+G ++ +
Sbjct: 63 DANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNFI 120
Query: 158 FKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECL 217
GF D + + L MY C ++ AS +F ++ + W+ ++ A +G +S +
Sbjct: 121 RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 218 KLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDM 277
LF +M + + V + + L ++ G+ HG ++++ V SL+
Sbjct: 181 GLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y+K ++ +F M ++ ++++ +I+G +G ++ LS+F +ML G+E D
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 338 VGVLSACSHAGLVNEGL--------LCF--------------------DRMKLEYRIVP- 368
V V + C+ + L++ G CF D K +R +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 369 -TVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V Y ++ R G+ GEA++L + M
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 31 EQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSI 87
E+ +L C +L F K +H ++++ G+F + A++LV A G++ A +
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA--KCGALLLAHML 556
Query: 88 FRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQAL 147
F I + +I G+ +EA+ L+N+M + G+E D +F +L AC+ +
Sbjct: 557 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 616
Query: 148 KEG 150
EG
Sbjct: 617 DEG 619
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/575 (39%), Positives = 349/575 (60%), Gaps = 6/575 (1%)
Query: 35 LTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+++L C +F + +H++ +K G F ++ L+ A +G + +F ++
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA--EFGRLRDCQKVFDRM 308
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N++I+ + + A+ L+ EM ++PD T +L ++L ++
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 152 QIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+ G + G F D+ + N+++ MY K V+ A A+F + V SW+ II+ +A N
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G SE ++++ M E + VSVL AC+ GAL G HG L++N L+V V
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
TSL DMY KCG LE L LF + + ++ +I+ HG G++A+ +F EML EG+
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD + +V +LSACSH+GLV+EG CF+ M+ +Y I P+++HYGC+VD+ GRAG L AL
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ 450
+ I+SM +Q + +W +LLSA +VH N+++G+IA+++LF++ H +VLLSNMYA A
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 451 RWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLK 510
+W V +IR+ KGL ++PG+S +EV KV F + +++HP ++ +Y + ++ +LK
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 511 FEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHT 570
GY PD VL+DV++DEK L HS++LAIAFALI + IRI +NLR+C DCH+
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 571 YTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TK IS I EREIIVRD RFH FK+G CSC DYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 206/412 (50%), Gaps = 13/412 (3%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
++LK C+ + + K+H LK+GF W+ + A++L+ S + ++ A +F ++
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHL--YSRYKAVGNARILFDEMPVRD 215
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+N +I G+ + +EAL L N + R + D+ T +L AC + G+ IH
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLSNGL--RAM--DSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
+ K G E +LFV N LI++Y + ++ +F +M + + SW++II A+ N
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVETSL 274
+ LF EM + +P+ L+S+ S + LG + + G +R L ++ + ++
Sbjct: 332 AISLFQEMRLSRI-QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 275 IDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPD 333
+ MY K G ++ +F + + ++++ +ISG A +G EA+ +++ M EG + +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+V VL ACS AG + +G+ R+ L+ + V + D+ G+ G L +AL L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ--INSHHPSDYVLLS 443
+P + N V W +L++ H + E + K + + H + LLS
Sbjct: 510 YQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 179/383 (46%), Gaps = 24/383 (6%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVAT-CALSHWGSMDYACSIFRQIDEP 94
T+ + C NL+ K +HA ++ N ++ LV C L G++ A F I
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYL---GNVALARHTFDHIQNR 115
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNE-MFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ +N +I G+ + E + ++ M G+ PD TFP++ KAC + + +G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
H K GF D++V SLI++Y + + V A +F +M + + SW+A+I+ + +G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 214 SECLKLFGEMNNEKCWRPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L L + R +S+ +VS+LSACT G + G H I++ + V
Sbjct: 233 KEALTLSNGL------RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LID+Y + G L +F M + ++++ +I ++ Q A+S+F EM ++P
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQP 346
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYR---IVPTVQHYGCVVDLMGRAGMLGEA 389
D + + + S S G + C R + + VV + + G++ A
Sbjct: 347 DCLTLISLASILSQLGDIRA---CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 390 LELIQSMPIQQNDVV-WRSLLSA 411
+ +P DV+ W +++S
Sbjct: 404 RAVFNWLP--NTDVISWNTIISG 424
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 18/296 (6%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
LF+ C LQ+ K +H + ++ + L+N+Y V A F + +
Sbjct: 59 TLFRYCTNLQSAK---CLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V +W+ +I+ + G SE ++ F P+ SVL AC + +D G
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--ID-GNKI 172
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H ++ +V V SLI +Y + + LF M + +++ MISG G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 316 KEALSIFSEMLREGLEP-DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYG 374
KEAL+ L GL D V V +LSAC+ AG N G + +++ + +
Sbjct: 233 KEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRG-VTIHSYSIKHGLESELFVSN 286
Query: 375 CVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQ 430
++DL G L + ++ M + ++ + W S++ A +++ + A +LFQ
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYV-RDLISWNSIIKAYELNEQ----PLRAISLFQ 337
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/591 (39%), Positives = 350/591 (59%), Gaps = 28/591 (4%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQI 91
++L C +LE K++HA+ LK G N F S LV + + S R
Sbjct: 307 SVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALV-----DMYCNCKQVLSGRRVF 361
Query: 92 DEPGAFD-----FNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQ 145
D G FD +N +I G+ + +EAL L+ M E G+ ++ T + AC +
Sbjct: 362 D--GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIA 205
A IHG V K G + D FVQN+L++MY + K++ A IF +M+ + + +W+ +I
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 206 AHASNGLWSECLKLFGEMNN----------EKCWRPEESILVSVLSACTHLGALDLGKCT 255
+ + + L L +M N +P L+++L +C L AL GK
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H I+N A +V V ++L+DMY KCGCL+ +F + K +T++V+I MHG G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 316 KEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+EA+ + M+ +G++P++V ++ V +ACSH+G+V+EGL F MK +Y + P+ HY C
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSH 434
VVDL+GRAG + EA +L+ MP N W SLL AS++H+NLEIGEIAA+NL Q+ +
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 435 HPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPA 494
S YVLL+N+Y+ A W ++R M +G+ + PG S +E +V+KFV+ D SHP
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 495 WDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGS 554
+ + + + +++ EGY PD S VL +V+EDEK L GHS+KLAIAF +++ S G+
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 555 PIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+A+NLR+CNDCH TK IS I +REII+RD +RFHRFK+GTCSC DYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/256 (34%), Positives = 138/256 (53%), Gaps = 6/256 (2%)
Query: 102 LIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVG 161
L+R V+ EA+ Y +M G++PDN+ FPAL KA A LQ ++ G QIH HV+K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 162 FECD-LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
+ D + V N+L+N+Y KC +F ++ +++ SW+++I++ S W L+ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLG---ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
M +E P LVSV++AC++L L +GK H +R LN + +L+ M
Sbjct: 188 RCMLDENV-EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFIINTLVAM 245
Query: 278 YVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY 337
Y K G L L + +T++ ++S L + Q EAL EM+ EG+EPD+
Sbjct: 246 YGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 338 VGVLSACSHAGLVNEG 353
VL ACSH ++ G
Sbjct: 306 SSVLPACSHLEMLRTG 321
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 188/404 (46%), Gaps = 29/404 (7%)
Query: 35 LTILKTCKNLEE------FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
++++ C NL K+VHA+ L+ G N F + LVA +G + S
Sbjct: 203 VSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAM-----YGKLGKLASSK 256
Query: 89 RQIDEPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQ 145
+ G D +NT++ + + EAL EM GVEPD FT ++ AC+ L+
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 146 ALKEGMQIHGHVFKVG-FECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
L+ G ++H + K G + + FV ++L++MY C++V +F M + + W+A+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
A ++ N E L LF M + + V+ AC GA + HG +++
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL 436
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
+ V+ +L+DMY + G ++ + +F M D+ +T++ MI+G ++AL + +
Sbjct: 437 DRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 325 ML-----------REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHY 373
M R L+P+ + + +L +C+ + +G ++ + V
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVG 555
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHN 417
+VD+ + G L + ++ +P Q+N + W ++ A +H N
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 185/395 (46%), Gaps = 35/395 (8%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+LK +L++ K++HAHV K+G+ + +N + G +F +I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNL-YRKCGDFGAVYKVFDRIS 160
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL---QALKE 149
E +N+LI ++E AL + M + VEP +FT ++ AC+ L + L
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+H + + G E + F+ N+L+ MYGK K+ + + + + +W+ ++++
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISA-LNV 268
N E L+ EM E P+E + SVL AC+HL L GK H ++N S N
Sbjct: 280 NEQLLEALEYLREMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V ++L+DMY C + G +F M D+ ++ MI+G + + KEAL +F M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 329 -GLEPDDVVYVGVLSACSHAG-----------LVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
GL + GV+ AC +G +V GL DR + VQ+ +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGL---DRDRF-------VQN--TL 446
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+D+ R G + A+ + M ++ V W ++++
Sbjct: 447 MDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 480
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/603 (37%), Positives = 357/603 (59%), Gaps = 35/603 (5%)
Query: 37 ILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVA---------------------- 71
+LK+C K +E +++H HVLK G + + ++L++
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 72 ----TCALSHWGSMDY---ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFE 124
T + + S Y A +F +I +N +I G+ + ++EAL L+ +M +
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 125 RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEF 184
V PD T + ACA+ +++ G Q+H + GF +L + N+LI++Y KC ++E
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 185 ASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACT 244
A +F+++ K V SW+ +I + L+ E L LF EM P + ++S+L AC
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACA 378
Query: 245 HLGALDLGKCTHGSLIRNISALNVI--VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTY 302
HLGA+D+G+ H + + + + + TSLIDMY KCG +E +F + K ++
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 303 SVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL 362
+ MI G AMHG+ + +FS M + G++PDD+ +VG+LSACSH+G+++ G F M
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 363 EYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGE 422
+Y++ P ++HYGC++DL+G +G+ EA E+I M ++ + V+W SLL A K+H N+E+GE
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 423 IAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKV 482
A+NL +I +P YVLLSN+YA A RW +VAK R + KG+ + PG S +E+ V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 483 YKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLA 542
++F+ D+ HP IY M+ +ME L+ G+ PD S+VL++++E+ K L+ HS+KLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 543 IAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCR 602
IAF LI G+ + I +NLR+C +CH TKLIS IY+REII RDR RFH F+DG CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 603 DYW 605
DYW
Sbjct: 739 DYW 741
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 197/374 (52%), Gaps = 38/374 (10%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVA 71
L +PP ++ L++L CK L+ + +HA ++K G + S L+
Sbjct: 19 FLPSSSDPPYD-----SIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIE 73
Query: 72 TCALS-HWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPD 130
C LS H+ + YA S+F+ I EP +NT+ RG + AL LY M G+ P+
Sbjct: 74 FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 131 NFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMY---GKCEK------ 181
++TFP + K+CAK +A KEG QIHGHV K+G + DL+V SLI+MY G+ E
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 182 ----------------------VEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+E A +F ++ K V SW+A+I+ +A G + E L+L
Sbjct: 194 KSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALEL 253
Query: 220 FGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYV 279
F +M RP+ES +V+V+SAC G+++LG+ H + + N+ + +LID+Y
Sbjct: 254 FKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 280 KCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
KCG LE LF + K ++++ +I G KEAL +F EMLR G P+DV +
Sbjct: 313 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 340 VLSACSHAGLVNEG 353
+L AC+H G ++ G
Sbjct: 373 ILPACAHLGAIDIG 386
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 16/237 (6%)
Query: 26 NLRLKEQECLTILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCAL----SHW 78
N+R E +T++ C ++E ++VH + GF SNL AL S
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGF------GSNLKIVNALIDLYSKC 314
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ AC +F ++ +NTLI G+ ++EAL L+ EM G P++ T ++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 139 KACAKLQALKEGMQIHGHVFK--VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS 196
ACA L A+ G IH ++ K G ++ SLI+MY KC +E A +F + KS
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
++SW+A+I A +G LF M +P++ V +LSAC+H G LDLG+
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGI-QPDDITFVGLLSACSHSGMLDLGR 490
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 153/364 (42%), Gaps = 54/364 (14%)
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN---MYGKCEKVEFASAIFKQM 192
+L C LQ+L+ IH + K+G + + LI + E + +A ++FK +
Sbjct: 38 SLLHNCKTLQSLR---IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+ ++ W+ + HA + LKL+ M + P VL +C A G
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLKSCAKSKAFKEG 153
Query: 253 KCTHGSLIRNISALNVIVETSLIDMYVKCGCLE---------------------KGLC-- 289
+ HG +++ L++ V TSLI MYV+ G LE KG
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 290 --------LFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVL 341
LF + K ++++ MISG A G KEAL +F +M++ + PD+ V V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 342 SACSHAGLVNEGL---LCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPI 398
SAC+ +G + G L D ++ ++ ++DL + G L A L + +P
Sbjct: 274 SACAQSGSIELGRQVHLWID----DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 399 QQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQ-------R 451
+ DV+ + L H NL + + P+D +LS + A A R
Sbjct: 330 K--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 452 WYDV 455
W V
Sbjct: 388 WIHV 391
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/613 (37%), Positives = 351/613 (57%), Gaps = 38/613 (6%)
Query: 27 LRLKEQECLTIL-KTCKNLEEFKKVHAHVLKWGFFWNP-FCASNLVATCALSHWGSMDYA 84
RL E L +L ++++E ++HA +L+ +P + NL A + G + ++
Sbjct: 24 FRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHS 83
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++F Q +P F F I ++A LY ++ + P+ FTF +L K+C+
Sbjct: 84 LALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST- 142
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE------------------------ 180
K G IH HV K G D +V L+++Y K
Sbjct: 143 ---KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMI 199
Query: 181 -------KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
VE A A+F M ++ + SW+ +I +A +G ++ L LF ++ E +P+E
Sbjct: 200 TCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
+V+ LSAC+ +GAL+ G+ H + + LNV V T LIDMY KCG LE+ + +F
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLR-EGLEPDDVVYVGVLSACSHAGLVNE 352
K + ++ MI+G AMHG ++AL +F+EM GL+P D+ ++G L AC+HAGLVNE
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 353 GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
G+ F+ M EY I P ++HYGC+V L+GRAG L A E I++M + + V+W S+L +
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 413 KVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPG 472
K+H + +G+ A+ L +N + YVLLSN+YA + VAK+R M KG+ + PG
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 473 FSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRE 532
S +E+ KV++F + DR H IY M+ ++ ++K GY P+ + VL+D++E EK +
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQ 559
Query: 533 RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFH 592
L+ HS++LAIA+ LI GSP++I +NLR+C+DCHT TKLIS I R+I++RDR RFH
Sbjct: 560 SLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 593 RFKDGTCSCRDYW 605
F DG+CSC D+W
Sbjct: 620 HFTDGSCSCGDFW 632
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/566 (38%), Positives = 338/566 (59%), Gaps = 10/566 (1%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI 103
L K++H + LK F +N A+ VA+ A GS+ YA +F I +N LI
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYA--KCGSLSYAQRVFHGIRSKTVNSWNALI 468
Query: 104 RGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFE 163
G + + +L + +M G+ PD+FT +L AC+KL++L+ G ++HG + + E
Sbjct: 469 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 528
Query: 164 CDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM 223
DLFV S++++Y C ++ A+F M+ KS+ SW+ +I + NG L +F +M
Sbjct: 529 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQM 588
Query: 224 ---NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
+ C ++ V AC+ L +L LG+ H ++++ + + SLIDMY K
Sbjct: 589 VLYGIQLCGIS----MMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
G + + +F + +K +++ MI G +HG KEA+ +F EM R G PDD+ ++GV
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 341 LSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQ 400
L+AC+H+GL++EGL D+MK + + P ++HY CV+D++GRAG L +AL ++ ++
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 401 NDV-VWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
DV +W+SLLS+ ++H NLE+GE A LF++ P +YVLLSN+YA +W DV K+R
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M L + G S +E+ RKV+ FV +R ++ I + +E ++ GY PD
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
V D+ E+EK E+L+GHS+KLA+ + LI S+G+ IR+ +NLR+C DCH KLIS +
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
EREI+VRD KRFH FK+G CSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 6/274 (2%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPAL 137
GS D + +F + F +N +I + + ++E L + EM + PD+FT+P +
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 138 FKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 197
KACA + + G+ +HG V K G D+FV N+L++ YG V A +F M ++++
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 198 ASWSAIIAAHASNGLWSECLKLFGEM---NNEKCWRPEESILVSVLSACTHLGALDLGKC 254
SW+++I + NG E L GEM N + + P+ + LV+VL C + LGK
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ 314
HG ++ +++ +L+DMY KCGC+ +F+M +K ++++ M+ G + G
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 315 GKEALSIFSEMLREG--LEPDDVVYVGVLSACSH 346
+ +ML G ++ D+V + + C H
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 10/317 (3%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++K C + + VH V+K G + F + LV+ +H G + A +F + E
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG-TH-GFVTDALQLFDIMPE 250
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE----PDNFTFPALFKACAKLQALKE 149
+N++IR F EE+ L EM E + PD T + CA+ + +
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G +HG K+ + +L + N+L++MY KC + A IFK + K+V SW+ ++ ++
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 210 NGLWSECLKLFGEM-NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNV 268
G + +M + + +E +++ + C H L K H ++ N
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 269 IVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
+V + + Y KCG L +F + K +++ +I G A + +L +M
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 329 GLEPDDVVYVGVLSACS 345
GL PD +LSACS
Sbjct: 491 GLLPDSFTVCSLLSACS 507
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 13/283 (4%)
Query: 137 LFKACAKLQALKEGMQIHGHVF-KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
L +A K + ++ G +IH V D + +I MY C + + +F + K
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
++ W+A+I++++ N L+ E L+ F EM + P+ V+ AC + + +G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
HG +++ +V V +L+ Y G + L LF +M ++ ++++ MI + +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 316 KEALSIFSEMLRE----GLEPDDVVYVGVLSACSHAGLVNEGLLCFD---RMKLEYRIVP 368
+E+ + EM+ E PD V VL C+ + G +++L+ +V
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
++D+ + G + A ++I M +N V W +++
Sbjct: 330 N----NALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGG 367
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/580 (38%), Positives = 342/580 (58%), Gaps = 16/580 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
T+++ C + + K++ +H L G F + F S L+ CA+S +G + +A IFR I +P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGV------EPDNFTFPALFKACAKLQALKE 149
D+N +IRGF A Y M ++ D T KACA+
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
Q+H + + G D + +L++ Y K + A +F +M + VASW+A+IA S
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
SE ++L+ M E R E ++ V+ L AC+HLG + G+ ++ S NVI
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTV-VAALGACSHLGDVKEGE----NIFHGYSNDNVI 242
Query: 270 VETSLIDMYVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
V + IDMY KCG ++K +F + K +T++ MI+G A+HG+ AL IF ++
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 302
Query: 329 GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
G++PDDV Y+ L+AC HAGLV GL F+ M + + ++HYGCVVDL+ RAG L E
Sbjct: 303 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 361
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYAR 448
A ++I SM + + V+W+SLL AS+++ ++E+ EIA++ + ++ ++ D+VLLSN+YA
Sbjct: 362 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 421
Query: 449 AQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQ 508
RW DV ++R +M SK + + PG S +E +++F + D+SH W IYE I ++ ++
Sbjct: 422 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 481
Query: 509 LKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHL---SQGSPIRIARNLRMC 565
++ +GY VL D+ E+EK L HS+KLA+A+ L+ + + SP+R+ NLR+C
Sbjct: 482 IREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRIC 541
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K IS IY+REIIVRDR RFHRFKDG+CSCRD+W
Sbjct: 542 GDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 333/582 (57%), Gaps = 11/582 (1%)
Query: 28 RLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYA 84
RL L IL L+E + ++H+ K G + + + + ++ S G +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL--YSKCGKIKMG 275
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
++FR+ +P +N +I G+ E E +L L+ E+ G + T +L L
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAII 204
+ IHG+ K F V +L +Y K ++E A +F + +KS+ SW+A+I
Sbjct: 336 MLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 205 AAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ + NGL + + LF EM + + P + +LSAC LGAL LGK H L+R+
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSE-FSPNPVTITCILSACAQLGALSLGKWVH-DLVRSTD 450
Query: 265 -ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
++ V T+LI MY KCG + + LF +M K ++T++ MISG +HGQG+EAL+IF
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
EML G+ P V ++ VL ACSHAGLV EG F+ M Y P+V+HY C+VD++GRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L AL+ I++M I+ VW +LL A ++H + + ++ LF+++ + +VLLS
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
N+++ + + A +R + L ++PG++L+E+ + F S D+SHP IYE +
Sbjct: 631 NIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLE 690
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++E +++ GY P+ L DV+E+E+ +K HS++LAIAF LI G+ IRI +NLR
Sbjct: 691 KLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLR 750
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C DCHT TKLIS I ER I+VRD RFH FKDG CSC DYW
Sbjct: 751 VCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L K ++ + HA ++ GF + + L T LS G++ YA IF + P
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKL--TQRLSDLGAIYYARDIFLSVQRP 81
Query: 95 GAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEGMQI 153
F FN L+RGF +L ++ + + ++P++ T+ A + + + G I
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG G + +L + ++++ MY K +VE A +F +M +K W+ +I+ + N ++
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E +++F ++ NE C R + + L+ +L A L L LG H + + V T
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
I +Y KCG ++ G LFR + Y+ MI G +G+ + +LS+F E++ G
Sbjct: 262 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 321
Query: 334 DVVYVGVLSACSHAGLV 350
V ++ H L+
Sbjct: 322 SSTLVSLVPVSGHLMLI 338
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/585 (37%), Positives = 343/585 (58%), Gaps = 13/585 (2%)
Query: 27 LRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDY 83
+RL E +++K C NL+E + ++H V+K+GF ++ + L+ A S +M
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV--AYSKCTAMLD 348
Query: 84 ACSIFRQIDEPG-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F++I G + +I GF++ EEA+ L++EM +GV P+ FT+ + A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+ ++H V K +E V +L++ Y K KVE A+ +F +D K + +WSA
Sbjct: 409 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGA-LDLGKCTHGSLIR 261
++A +A G +K+FGE+ +P E S+L+ C A + GK HG I+
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQGKQFHGFAIK 523
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ ++ V ++L+ MY K G +E +F+ +K ++++ MISG A HGQ +AL +
Sbjct: 524 SRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 322 FSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMG 381
F EM + ++ D V ++GV +AC+HAGLV EG FD M + +I PT +H C+VDL
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 382 RAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVL 441
RAG L +A+++I++MP +WR++L+A +VH E+G +AA+ + + + YVL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 442 LSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEM 501
LSNMYA + W + AK+R M + + + PG+S +EV K Y F++ DRSHP D IY
Sbjct: 704 LSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMK 763
Query: 502 IHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARN 561
+ + +LK GY PD S VL+D+D++ K L HS++LAIAF LI +GSP+ I +N
Sbjct: 764 LEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKN 823
Query: 562 LRMCNDCHTYTKLISVIYEREIIVRDRKRFHRF-KDGTCSCRDYW 605
LR+C DCH KLI+ I EREI+VRD RFH F DG CSC D+W
Sbjct: 824 LRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 182/368 (49%), Gaps = 16/368 (4%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+++H +K+GF + ++LV T + +F ++ E + TLI G+
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDT--YMKGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +E L L+ M G +P++FTF A A+ G+Q+H V K G + +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLIN+Y KC V A +F + + KSV +W+++I+ +A+NGL E L +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
R ES SV+ C +L L + H S+++ + + T+L+ Y KC +
Sbjct: 291 V-RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 288 LCLFRMMADKC---QLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
L LF+ + C ++++ MISG + +EA+ +FSEM R+G+ P++ Y +L+A
Sbjct: 350 LRLFKEIG--CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
+++ + +K Y TV ++D + G + EA ++ I D+V
Sbjct: 408 P---VISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEAAKVFSG--IDDKDIV 460
Query: 405 -WRSLLSA 411
W ++L+
Sbjct: 461 AWSAMLAG 468
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 143/322 (44%), Gaps = 24/322 (7%)
Query: 101 TLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
+L+ GF ++ +EA L+ + G+E D F ++ K A L G Q+H K
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKF 122
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
GF D+ V SL++ Y K + +F +M +++V +W+ +I+ +A N + E L LF
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M NE +P + L G G H +++N + V SLI++Y+K
Sbjct: 183 MRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLK 241
Query: 281 CGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGV 340
CG + K LF K +T++ MISG A +G EAL +F M + + + V
Sbjct: 242 CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 341 LSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ C+ H +V G L FD+ R V + C L +A
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFL-FDQ---NIRTALMVAYSKCTAML--------DA 349
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
L L + + N V W +++S
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISG 371
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/574 (38%), Positives = 340/574 (59%), Gaps = 9/574 (1%)
Query: 37 ILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C L + VHA V + GF + F + L+A A + A ++F +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCR--RLGSARTVFEGLPL 182
Query: 94 P--GAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
P + ++ + + E EAL ++++M + V+PD ++ A LQ LK+G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
IH V K+G E + + SL MY KC +V A +F +M ++ W+A+I+ +A NG
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
E + +F EM N+ RP+ + S +SAC +G+L+ + + + R+ +V +
Sbjct: 303 YAREAIDMFHEMINKDV-RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
++LIDM+ KCG +E +F D+ + +S MI G +HG+ +EA+S++ M R G+
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
P+DV ++G+L AC+H+G+V EG F+RM +++I P QHY CV+DL+GRAG L +A E
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
+I+ MP+Q VW +LLSA K H ++E+GE AA+ LF I+ + YV LSN+YA A+
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
W VA++R M KGLN+ G S VEV ++ F D+SHP ++ I + +E +LK
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 512 EGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
G+ + L D++++E E L HS+++AIA+ LI QG+P+RI +NLR C +CH
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS + +REI+VRD RFH FKDG CSC DYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 212 bits (540), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 221/415 (53%), Gaps = 10/415 (2%)
Query: 36 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG 95
+++ + + + K++HA +L G ++ F + L+ A S +G + +A +F + P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIH--ASSSFGDITFARQVFDDLPRPQ 83
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
F +N +IRG+ + F++AL +Y+ M V PD+FTFP L KAC+ L L+ G +H
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFK--QMDQKSVASWSAIIAAHASNGLW 213
VF++GF+ D+FVQN LI +Y KC ++ A +F+ + ++++ SW+AI++A+A NG
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L++F +M +P+ LVSVL+A T L L G+ H S+++ + + S
Sbjct: 204 MEALEIFSQMRKMDV-KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
L MY KCG + LF M + ++ MISG A +G +EA+ +F EM+ + + PD
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ +SAC+ G + + ++ + + +YR V ++D+ + G + E L
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYR--DDVFISSALIDMFAKCGSV-EGARL 379
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYA 447
+ + ++ VVW +++ +H I+ + HP+D L + A
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAR-EAISLYRAMERGGVHPNDVTFLGLLMA 433
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/581 (37%), Positives = 339/581 (58%), Gaps = 8/581 (1%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K + + +L+ C ++++ +K+H+HV+ G +P ++L+ CA+S GS+ +A +F
Sbjct: 4 KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 90 QID-EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVE-PDNFTFPALFKACAKLQAL 147
D +P D+N LIRGF ++ YN M V PD FTF K+C +++++
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 148 KEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAH 207
+ ++IHG V + GF D V SL+ Y VE AS +F +M + + SW+ +I
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH--GSLIRNISA 265
+ GL ++ L ++ M NE + LV++LS+C H+ AL++G H IR S
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVC-GDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 266 LNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEM 325
V V +LIDMY KCG LE + +F M + LT++ MI G +HG G EA+S F +M
Sbjct: 243 --VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 326 LREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGM 385
+ G+ P+ + ++G+L CSH GLV EG+ F+ M ++ + P V+HYGC+VDL GRAG
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L +LE+I + ++ V+WR+LL + K+H NLE+GE+A K L Q+ + + DYVL++++
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
Y+ A A +R + S L PG+S +E+ +V+KFV D+ HP IY + ++
Sbjct: 421 YSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEV 480
Query: 506 EWQLKFEGYSPDISQVLRDVDEDEKRERL-KGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
+ GY P+ S D HS+KLAIA+ L+ + G+ +RI +NLR+
Sbjct: 481 INRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRV 540
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH++TK +S + REIIVRDR RFH F DG CSC DYW
Sbjct: 541 CRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/590 (36%), Positives = 346/590 (58%), Gaps = 34/590 (5%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
+ +H +K + F A++L+ C S G +D AC +F I E +N++I GFV
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLI-HCYFS-CGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
++ ++AL L+ +M V+ + T + ACAK++ L+ G Q+ ++ + +L
Sbjct: 209 QKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMD-------------------------------QKS 196
+ N++++MY KC +E A +F M+ QK
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKD 328
Query: 197 VASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTH 256
+ +W+A+I+A+ NG +E L +F E+ +K + + LVS LSAC +GAL+LG+ H
Sbjct: 329 IVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIH 388
Query: 257 GSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGK 316
+ ++ +N V ++LI MY KCG LEK +F + + +S MI GLAMHG G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 317 EALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCV 376
EA+ +F +M ++P+ V + V ACSH GLV+E F +M+ Y IVP +HY C+
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 377 VDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHP 436
VD++GR+G L +A++ I++MPI + VW +LL A K+H NL + E+A L ++ +
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 437 SDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWD 496
+VLLSN+YA+ +W +V+++R M GL + PG S +E+ +++F+S D +HP +
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 497 NIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRER-LKGHSQKLAIAFALIHLSQGSP 555
+Y +H++ +LK GY P+ISQVL+ ++E+E +E+ L HS+KLAI + LI
Sbjct: 629 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 688
Query: 556 IRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IR+ +NLR+C DCH+ KLIS +Y+REIIVRDR RFH F++G CSC D+W
Sbjct: 689 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 217/441 (49%), Gaps = 44/441 (9%)
Query: 13 LTQPEEP----PKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASN 68
L+ P P P P N +++++ C +L + K+ H H+++ G F +P+ AS
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRH--ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASK 67
Query: 69 LVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMF-ERGV 127
L A ALS + S++YA +F +I +P +F +NTLIR + + +++ + +M E
Sbjct: 68 LFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQC 127
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
P+ +TFP L KA A++ +L G +HG K D+FV NSLI+ Y C ++ A
Sbjct: 128 YPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACK 187
Query: 188 IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLG 247
+F + +K V SW+++I G + L+LF +M +E + +V VLSAC +
Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDV-KASHVTMVGVLSACAKIR 246
Query: 248 ALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMIS 307
L+ G+ + N +N+ + +++DMY KCG +E LF M +K +T++ M+
Sbjct: 247 NLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 306
Query: 308 GLAM-------------------------------HGQGKEALSIFSEM-LREGLEPDDV 335
G A+ +G+ EAL +F E+ L++ ++ + +
Sbjct: 307 GYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
V LSAC+ G + G +K ++ I ++ + + G L ++ E+ S
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNS 425
Query: 396 MPIQQNDV-VWRSLLSASKVH 415
+++ DV VW +++ +H
Sbjct: 426 --VEKRDVFVWSAMIGGLAMH 444
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 323/576 (56%), Gaps = 13/576 (2%)
Query: 37 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK L +F +++HA + GF + + + L + D DE
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI-----LDFYSKHDRVLETRMLFDE 310
Query: 94 PGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
DF N +I + + ++E +L + EM G + NF F + A L +L+ G
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMG 370
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Q+H + L V NSL++MY KCE E A IFK + Q++ SW+A+I+ +
Sbjct: 371 RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
GL LKLF +M R ++S +VL A +L LGK H +IR+ + NV
Sbjct: 431 GLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
+ L+DMY KCG ++ + +F M D+ ++++ +IS A +G G+ A+ F++M+ GL
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 331 EPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEAL 390
+PD V +GVL+ACSH G V +G F M Y I P +HY C++DL+GR G EA
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 391 ELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS-HHPSDYVLLSNMYARA 449
+L+ MP + ++++W S+L+A ++H N + E AA+ LF + + YV +SN+YA A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
W V ++ M +G+ + P +S VEV K++ F S D++HP D I I+++ ++
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
+ EGY PD S V++DVDE K E LK HS++LA+AFALI +G PI + +NLR C DCH
Sbjct: 730 EREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCH 789
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
KLIS I +REI VRD RFH F +G CSC DYW
Sbjct: 790 AAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 181/392 (46%), Gaps = 32/392 (8%)
Query: 36 TILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
T+L C + +VHA +K GF NPF + V + +D AC +F +I
Sbjct: 152 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP 211
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E + FNTLI G+ K+ + E++ L+ +M + G +P +FTF + KA L G Q
Sbjct: 212 EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H GF D V N +++ Y K ++V +F +M + S++ +I++++
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 213 WSECLKLFGEMNNEKC--WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
+ L F EM +C + ++LS +L +L +G+ H + + + V
Sbjct: 332 YEASLHFFREM---QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
SL+DMY KC E+ +F+ + + ++++ +ISG G L +F++M L
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNL 448
Query: 331 EPDDVVYVGVLSACS-----------HAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
D + VL A + HA ++ G L V +VD+
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL------------ENVFSGSGLVDM 496
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
+ G + +A+++ + MP +N V W +L+SA
Sbjct: 497 YAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 170 NSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEM-NNEKC 228
N++I+ + K V A +F M ++V +W+ ++ +A N + E KLF +M + C
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 229 WRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN--VIVETSLIDMYVKCGCLEK 286
P+ ++L C + H ++ N + V L+ Y + L+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSA 343
LF + +K +T++ +I+G G E++ +F +M + G +P D + GVL A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 128/327 (39%), Gaps = 55/327 (16%)
Query: 26 NLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
NLR + T+LK + K++HA +++ G N F S LV A GS+
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA--KCGSIK 504
Query: 83 YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACA 142
A +F ++ + A +N LI + E A+ + +M E G++PD+ + + AC+
Sbjct: 505 DAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACS 564
Query: 143 KLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSA 202
+++G + ++ +YG K + ++
Sbjct: 565 HCGFVEQGTEYF---------------QAMSPIYGITPKKK---------------HYAC 594
Query: 203 IIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRN 262
++ NG ++E KL EM E P+E + SVL+AC L + L
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFE----PDEIMWSSVLNACRIHKNQSLAERAAEKLFSM 650
Query: 263 ISALNVIVETSLIDMYVKCGCLEKGLCLFRMMAD---KCQLTYS---------VMISGLA 310
+ S+ ++Y G EK + + M + K YS V S
Sbjct: 651 EKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQ 710
Query: 311 MHGQGKEAL----SIFSEMLREGLEPD 333
H G E + + +E+ REG +PD
Sbjct: 711 THPNGDEIVRKINELTAEIEREGYKPD 737
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 339/581 (58%), Gaps = 6/581 (1%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMDYACSIFR 89
+ L+++ + +++HA +L+ N + ++ ALS ++Y+C +F
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDN-FTFPALFKACAKLQALK 148
Q P NT+IR F E L+ + P N + K C K L
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G+QIHG +F GF D + +L+++Y CE A +F ++ ++ SW+ + + +
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 209 SNGLWSECLKLFGEMNNE--KCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
N + L LF +M N+ C +P+ + L AC +LGALD GK H + N +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
+ + +L+ MY +CG ++K +F M ++ ++++ +ISGLAM+G GKEA+ F+EML
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 327 REGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHYGCVVDLMGRAGM 385
+ G+ P++ G+LSACSH+GLV EG++ FDRM+ E++I P + HYGCVVDL+GRA +
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 386 LGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNM 445
L +A LI+SM ++ + +WR+LL A +VH ++E+GE +L ++ + DYVLL N
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNT 430
Query: 446 YARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQM 505
Y+ +W V ++R+ M K ++ PG S +E+ V++F+ D SHP + IY+M+ ++
Sbjct: 431 YSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEI 490
Query: 506 EWQLKFEGYSPDISQVLRDVD-EDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRM 564
QLK GY +I+ L +++ E+EK L+ HS+KLAIAF ++ G+ IR+ +NLR
Sbjct: 491 NQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRT 550
Query: 565 CNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
C DCH + K +S +Y+R +IVRDR RFH FK G+CSC D+W
Sbjct: 551 CVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 346/606 (57%), Gaps = 42/606 (6%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
++ C LE+ + KV+A + G N S LV ++D A +F DE
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM--YMKCNAIDVAKRLF---DE 296
Query: 94 PGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
GA + N + +V++ EAL ++N M + GV PD + + +C++L+ + G
Sbjct: 297 YGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
HG+V + GFE + N+LI+MY KC + + A IF +M K+V +W++I+A + N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 211 G-------------------------------LWSECLKLFGEMNNEKCWRPEESILVSV 239
G L+ E +++F M +++ + ++S+
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
SAC HLGALDL K + + +N L+V + T+L+DM+ +CG E + +F + ++
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDR 359
++ I +AM G + A+ +F +M+ +GL+PD V +VG L+ACSH GLV +G F
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
M + + P HYGC+VDL+GRAG+L EA++LI+ MP++ NDV+W SLL+A +V N+E
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVE 656
Query: 420 IGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVA 479
+ AA+ + + YVLLSN+YA A RW D+AK+R M KGL + PG S +++
Sbjct: 657 MAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Query: 480 RKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQ 539
K ++F S D SHP NI M+ ++ + G+ PD+S VL DVDE EK L HS+
Sbjct: 717 GKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSE 776
Query: 540 KLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTC 599
KLA+A+ LI ++G+ IRI +NLR+C+DCH++ K S +Y REII+RD RFH + G C
Sbjct: 777 KLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKC 836
Query: 600 SCRDYW 605
SC D+W
Sbjct: 837 SCGDFW 842
Score = 189 bits (480), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 212/440 (48%), Gaps = 35/440 (7%)
Query: 5 SVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPF 64
+VLH S ++ K LN + + LK CK ++E K H + K G +
Sbjct: 6 NVLHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVS 65
Query: 65 CASNLVA-TCALSHWGSMDYACSIFRQIDEPGA-FDFNTLIRGFVKEVEFEEALFLYNEM 122
+ LVA +C L S+ +A +F + G F +N+LIRG+ EA+ L+ M
Sbjct: 66 TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125
Query: 123 FERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKV 182
G+ PD +TFP ACAK +A G+QIHG + K+G+ DLFVQNSL++ Y +C ++
Sbjct: 126 MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL 185
Query: 183 EFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSA 242
+ A +F +M +++V SW+++I +A + + LF M ++ P +V V+SA
Sbjct: 186 DSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 243 CTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLT 301
C L L+ G+ + + IRN +N ++ ++L+DMY+KC ++ LF
Sbjct: 246 CAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 302 YSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS-----------HAGLV 350
+ M S G +EAL +F+ M+ G+ PD + + +S+CS H ++
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVL 364
Query: 351 NEGLLCFD--------------RMKLEYRIV-----PTVQHYGCVVDLMGRAGMLGEALE 391
G +D R +RI TV + +V G + A E
Sbjct: 365 RNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWE 424
Query: 392 LIQSMPIQQNDVVWRSLLSA 411
++MP ++N V W +++S
Sbjct: 425 TFETMP-EKNIVSWNTIISG 443
Score = 119 bits (299), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 185/389 (47%), Gaps = 53/389 (13%)
Query: 49 KVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRG 105
++H ++K G+ + F ++LV A C G +D A +F ++ E + ++I G
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAEC-----GELDSARKVFDEMSERNVVSWTSMICG 209
Query: 106 FVKEVEFEEALFLYNEMF-ERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
+ + ++A+ L+ M + V P++ T + ACAKL+ L+ G +++ + G E
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
+ + ++L++MY KC ++ A +F + ++ +A+ + + GL E L +F M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ RP+ ++S +S+C+ L + GK HG ++RN + +LIDMY+KC
Sbjct: 330 DSGV-RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHG----------------------------QG- 315
+ +F M++K +T++ +++G +G QG
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 316 --KEALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLLCF-----DRMKLEYRIV 367
+EA+ +F M +EG+ D V + + SAC H G ++ + + ++L+ R+
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 368 PTVQHYGCVVDLMGRAGMLGEALELIQSM 396
T +VD+ R G A+ + S+
Sbjct: 509 TT------LVDMFSRCGDPESAMSIFNSL 531
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/582 (37%), Positives = 345/582 (59%), Gaps = 19/582 (3%)
Query: 38 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQI 91
+K C +L + K+ H +G+ + F +S L+ +TC G ++ A +F +I
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC-----GKLEDARKVFDEI 137
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTF------PALFKACAKLQ 145
+ + ++IRG+ +A+ L+ ++ + D+ F ++ AC+++
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVP 197
Query: 146 ALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEK--VEFASAIFKQMDQKSVASWSAI 203
A IH V K GF+ + V N+L++ Y K + V A IF Q+ K S+++I
Sbjct: 198 AKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSI 257
Query: 204 IAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
++ +A +G+ +E ++F + K L +VL A +H GAL +GKC H +IR
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFS 323
+VIV TS+IDMY KCG +E F M +K +++ MI+G MHG +AL +F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 324 EMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
M+ G+ P+ + +V VL+ACSHAGL EG F+ MK + + P ++HYGC+VDL+GRA
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLS 443
G L +A +LIQ M ++ + ++W SLL+A ++H N+E+ EI+ LF+++S + Y+LLS
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 444 NMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIH 503
++YA A RW DV ++R M ++GL + PGFSL+E+ +V+ F+ D HP + IYE +
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 504 QMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLR 563
++ +L GY + S V DVDE+EK L+ HS+KLAIAF +++ GS + + +NLR
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLR 617
Query: 564 MCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+C+DCH KLIS I +RE +VRD KRFH FKDG CSC DYW
Sbjct: 618 VCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 39/397 (9%)
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
R +D+ F +N++I + + EAL ++ M + + P +FP KAC+ L +
Sbjct: 34 RYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIF 93
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHA 208
G Q H F G++ D+FV ++LI MY C K+E A +F ++ ++++ SW+++I +
Sbjct: 94 SGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 209 SNGLWSECLKLFGEM-----NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
NG + + LF ++ +++ + LVSV+SAC+ + A L + H +I+
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLC----LFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
V V +L+D Y K G E G+ +F + DK +++Y+ ++S A G EA
Sbjct: 214 FDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 320 SIFSEMLREGLEPDDVVYVG-VLSACSHAGLVNEGLLCFD---RMKLEYRIVPTVQHYGC 375
+F +++ + + + + VL A SH+G + G D RM LE ++
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS---- 327
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNL----FQI 431
++D+ + G + A + M +N W ++++ +H + AAK L I
Sbjct: 328 IIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAGYGMHGH------AAKALELFPAMI 380
Query: 432 NSHHPSDYVLL---------SNMYARAQRWYDVAKIR 459
+S +Y+ + ++ RW++ K R
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR 417
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 180 EKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSV 239
E+ + + +D+ V SW+++IA A +G +E L F M + P S
Sbjct: 24 ERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY-PTRSSFPCA 82
Query: 240 LSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQ 299
+ AC+ L + GK TH ++ V ++LI MY CG LE +F + +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 300 LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVY------VGVLSACS 345
++++ MI G ++G +A+S+F ++L + + DD ++ V V+SACS
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 339/626 (54%), Gaps = 65/626 (10%)
Query: 44 LEEFKKVHAHVLKWGFFWNPFCAS---NLVATCA----------------LSHW------ 78
+E KKVH+ ++K G N ++ N+ A C +S W
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 79 ----GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV-EPDNFT 133
G MD A + F Q+ E +N++I GF + AL ++++M + PD FT
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFA-------- 185
++ ACA L+ L G QIH H+ GF+ V N+LI+MY +C VE A
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 186 -------------------------SAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
IF + + V +W+A+I + +G + E + LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
M RP L ++LS + L +L GK HGS +++ +V V +LI MY K
Sbjct: 402 RSMVG-GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 281 CGCLEKGLCLFRMM-ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
G + F ++ ++ ++++ MI LA HG +EAL +F ML EGL PD + YVG
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
V SAC+HAGLVN+G FD MK +I+PT+ HY C+VDL GRAG+L EA E I+ MPI+
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 400 QNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIR 459
+ V W SLLSA +VH N+++G++AA+ L + + Y L+N+Y+ +W + AKIR
Sbjct: 581 PDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640
Query: 460 TEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDIS 519
M + + GFS +EV KV+ F +D +HP + IY + ++ ++K GY PD +
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTA 700
Query: 520 QVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIY 579
VL D++E+ K + L+ HS+KLAIAF LI + +RI +NLR+CNDCHT K IS +
Sbjct: 701 SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760
Query: 580 EREIIVRDRKRFHRFKDGTCSCRDYW 605
REIIVRD RFH FKDG CSCRDYW
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 178/429 (41%), Gaps = 72/429 (16%)
Query: 55 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEE 114
L+ F WN + A S G MD C F Q+ + + + T+I G+ ++ +
Sbjct: 77 LRTAFSWNTVLS-------AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHK 129
Query: 115 ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLIN 174
A+ + +M + G+EP FT + + A + ++ G ++H + K+G ++ V NSL+N
Sbjct: 130 AIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLN 189
Query: 175 MYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG------------------LWS-- 214
MY KC A +F +M + ++SW+A+IA H G W+
Sbjct: 190 MYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSM 249
Query: 215 -----------ECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNI 263
L +F +M + P+ L SVLSAC +L L +GK H ++
Sbjct: 250 ISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTG 309
Query: 264 SALNVIVETSLIDMYVKCGCLEKGLCL--------------------------------- 290
++ IV +LI MY +CG +E L
Sbjct: 310 FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNI 369
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F + D+ + ++ MI G HG EA+++F M+ G P+ +LS S +
Sbjct: 370 FVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASL 429
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
+ G ++ + +V ++ + +AG + A + +++ V W S++
Sbjct: 430 SHGKQIHGS-AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 411 ASKVHHNLE 419
A H + E
Sbjct: 489 ALAQHGHAE 497
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 64/257 (24%)
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKC----------EKVEFASA--------------- 187
+H V K G +++ N+L+N+Y K +++ +A
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 188 ------IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLS 241
F Q+ Q+ SW+ +I + + G + + +++ G+M E P + L +VL+
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGI-EPTQFTLTNVLA 154
Query: 242 ACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKC-------------------- 281
+ ++ GK H +++ NV V SL++MY KC
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISS 214
Query: 282 -----------GCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG- 329
G ++ + F MA++ +T++ MISG G AL IFS+MLR+
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSL 274
Query: 330 LEPDDVVYVGVLSACSH 346
L PD VLSAC++
Sbjct: 275 LSPDRFTLASVLSACAN 291
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 332/563 (58%), Gaps = 5/563 (0%)
Query: 45 EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIR 104
++ KK+HA VL+ GF + L+ + G M YA +F ++ +P F +NTL +
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVV--IGDMCYARQVFDEMHKPRIFLWNTLFK 82
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
G+V+ E+L LY +M + GV PD FT+P + KA ++L G +H HV K GF C
Sbjct: 83 GYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
V L+ MY K ++ A +F+ M K + +W+A +A G + L+ F +M
Sbjct: 143 LGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC 202
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + + +VS+LSAC LG+L++G+ + + N+IVE + +DM++KCG
Sbjct: 203 ADAV-QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
E LF M + +++S MI G AM+G +EAL++F+ M EGL P+ V ++GVLSAC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 345 SHAGLVNEGLLCFDRM--KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
SHAGLVNEG F M + + P +HY C+VDL+GR+G+L EA E I+ MP++ +
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
+W +LL A VH ++ +G+ A L + S +VLLSN+YA A +W V K+R++M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G + +S VE K++ F D+SHP IYE + ++ +++ GY PD V
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
DV+ +EK L HS+KLAIAF LI G PIR+ +NLR C+DCH ++K +S + E
Sbjct: 502 HDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTE 561
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
II+RD+ RFH F++G CSC+++W
Sbjct: 562 IIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/558 (37%), Positives = 333/558 (59%), Gaps = 4/558 (0%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFV 107
K++H + ++ GF ++ LV A GS++ A +F + E +N++I +V
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYA--KCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 108 KEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLF 167
+ +EA+ ++ +M + GV+P + + ACA L L+ G IH ++G + ++
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V NSLI+MY KC++V+ A+++F ++ +++ SW+A+I A NG + L F +M + +
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-R 432
Query: 228 CWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKG 287
+P+ VSV++A L K HG ++R+ NV V T+L+DMY KCG +
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 492
Query: 288 LCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHA 347
+F MM+++ T++ MI G HG GK AL +F EM + ++P+ V ++ V+SACSH+
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 348 GLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRS 407
GLV GL CF MK Y I ++ HYG +VDL+GRAG L EA + I MP++ V+ +
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 408 LLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGL 467
+L A ++H N+ E AA+ LF++N +VLL+N+Y A W V ++R M +GL
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 468 NQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDE 527
++PG S+VE+ +V+ F S +HP IY + ++ +K GY PD + VL V+
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVEN 731
Query: 528 DEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRD 587
D K + L HS+KLAI+F L++ + G+ I + +NLR+C DCH TK IS++ REI+VRD
Sbjct: 732 DVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRD 791
Query: 588 RKRFHRFKDGTCSCRDYW 605
+RFH FK+G CSC DYW
Sbjct: 792 MQRFHHFKNGACSCGDYW 809
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 171/323 (52%), Gaps = 3/323 (0%)
Query: 31 EQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQ 90
E +L+ C +L+E +++ V K G + F + LV+ +GS+D A +F
Sbjct: 37 EHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSL--FCRYGSVDEAARVFEP 94
Query: 91 IDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEG 150
ID ++T+++GF K + ++AL + M VEP + F L K C L+ G
Sbjct: 95 IDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVG 154
Query: 151 MQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
+IHG + K GF DLF L NMY KC +V A +F +M ++ + SW+ I+A ++ N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G+ L++ M E +P +VSVL A + L + +GK HG +R+ V +
Sbjct: 215 GMARMALEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL 330
T+L+DMY KCG LE LF M ++ ++++ MI + KEA+ IF +ML EG+
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 331 EPDDVVYVGVLSACSHAGLVNEG 353
+P DV +G L AC+ G + G
Sbjct: 334 KPTDVSVMGALHACADLGDLERG 356
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 314/527 (59%), Gaps = 2/527 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G ++ A +FR + E + + +I+G + +EA+ + EM +G++ D + F ++
Sbjct: 219 GMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
AC L A+ EG QIH + + F+ ++V ++LI+MY KC+ + +A +F +M QK+V
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A++ + G E +K+F +M P+ L +SAC ++ +L+ G HG
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGI-DPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I + V V SL+ +Y KCG ++ LF M + ++++ M+S A G+ E
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
+ +F +M++ GL+PD V GV+SACS AGLV +G F M EY IVP++ HY C++D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L R+G L EA+ I MP + + W +LLSA + NLEIG+ AA++L +++ HHP+
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
Y LLS++YA +W VA++R M K + + PG S ++ K++ F + D S P D I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
Y + ++ ++ GY PD S V DV+E K + L HS++LAIAF LI + G PIR+
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH TK IS + REI+VRD RFHRFKDGTCSC D+W
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLI---- 103
K +H ++++ + F +N+V AL S YA +F +I +P F +N L+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMK--SSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 104 -RGFVKEVE--FEE------------------------ALFLYNEMF-ERGVEPDNFTFP 135
G + E+E FE+ A+ YN M + T
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGK----------------- 178
+ K + + G QIHG V K+GFE L V + L+ MY
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 179 --------------CEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
C +E A +F+ M++ SV SW+A+I A NGL E ++ F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + ++ SVL AC LGA++ GK H +IR ++ V ++LIDMY KC CL
Sbjct: 263 VQGL-KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSAC 344
+F M K ++++ M+ G G+ +EA+ IF +M R G++PD +SAC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 345 SHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
++ + EG F + ++ V +V L G+ G + ++ L M + ++ V
Sbjct: 382 ANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVS 439
Query: 405 WRSLLSA 411
W +++SA
Sbjct: 440 WTAMVSA 446
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/637 (36%), Positives = 350/637 (54%), Gaps = 66/637 (10%)
Query: 34 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
CL++L +CKNL ++H +K+G + + L+ CA+S ++ YA + E
Sbjct: 8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERG-VEPDNFTFPALFKACAKL-------- 144
P AF FNTL+RG+ + E ++ ++ EM +G V PD+F+F + KA
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 145 ---QALKEGMQIH--------------------GHVFKVGFECDLFVQNSLINM------ 175
QALK G++ H VF + +L N++I
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 176 -------------------------YGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASN 210
Y K ++E A IF +M + SWS +I A N
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHN 247
Query: 211 GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIV 270
G ++E F E+ P E L VLSAC+ G+ + GK HG + + + V V
Sbjct: 248 GSFNESFLYFRELQRAG-MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 271 ETSLIDMYVKCGCLEKGLCLFRMMADK-CQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+LIDMY +CG + +F M +K C ++++ MI+GLAMHGQG+EA+ +F+EM G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ PD + ++ +L ACSHAGL+ EG F MK Y I P ++HYGC+VDL GR+G L +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
+ I MPI +VWR+LL A H N+E+ E + L +++ ++ D VLLSN YA A
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W DVA IR M + + ++ +SLVEV + +YKF + ++ +E + ++ +L
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 510 KFE-GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
K E GY+P+++ L DV+E+EK +++ HS+KLA+AFAL LS+G+ IRI +NLR+C DC
Sbjct: 547 KDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H KL S +Y EI+VRDR RFH FKDG+CSCRDYW
Sbjct: 607 HAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/572 (36%), Positives = 333/572 (58%), Gaps = 6/572 (1%)
Query: 37 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
+LK C K +H+ V+K GF + ++L++ + S G ++ A +F +I +
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS--GRLNDAHKLFDEIPD 174
Query: 94 PGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ L G+ EA+ L+ +M E GV+PD++ + AC + L G I
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
++ ++ + + FV+ +L+N+Y KC K+E A ++F M +K + +WS +I +ASN
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E ++LF +M E +P++ +V LS+C LGALDLG+ + R+ N+ + +
Sbjct: 295 KEGIELFLQMLQENL-KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + +G +F+ M +K + + ISGLA +G K + ++F + + G+ PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
++G+L C HAGL+ +GL F+ + Y + TV+HYGC+VDL GRAGML +A LI
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
MP++ N +VW +LLS ++ + ++ E K L + + +YV LSN+Y+ RW
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWD 533
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+ A++R M KG+ + PG+S +E+ KV++F++ D+SHP D IY + + +++ G
Sbjct: 534 EAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P V DV+E+EK L HS+KLA+A LI G IR+ +NLR+C DCH K
Sbjct: 594 FVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMK 653
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
LIS I REI+VRD RFH F +G+CSC DYW
Sbjct: 654 LISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 12/378 (3%)
Query: 30 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFR 89
K Q+ T++ + K++H ++ + F + L+ + Y+ +F
Sbjct: 12 KVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLF--FRQTKYSYLLFS 69
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
P F +N+LI GFV F E L L+ + + G+ FTFP + KAC + + K
Sbjct: 70 HTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL 129
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G+ +H V K GF D+ SL+++Y ++ A +F ++ +SV +W+A+ + + +
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTT 189
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+G E + LF +M E +P+ +V VLSAC H+G LD G+ + N
Sbjct: 190 SGRHREAIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V T+L+++Y KCG +EK +F M +K +T+S MI G A + KE + +F +ML+E
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 330 LEPDDVVYVGVLSACSHAGLVNE---GLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGML 386
L+PD VG LS+C+ G ++ G+ DR + + + ++D+ + G +
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDR----HEFLTNLFMANALIDMYAKCGAM 364
Query: 387 GEALELIQSMPIQQNDVV 404
E+ + M ++ D+V
Sbjct: 365 ARGFEVFKEM--KEKDIV 380
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/621 (35%), Positives = 345/621 (55%), Gaps = 49/621 (7%)
Query: 28 RLKEQECLTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSM 81
RL + L ILK + E ++H K +PF + ++ A+C G +
Sbjct: 108 RLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASC-----GRI 162
Query: 82 DYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC 141
+YA ++F ++ +NT+I + + +EA L+ EM + V PD + AC
Sbjct: 163 NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSAC 222
Query: 142 AKLQALKEGMQIHGHVFK-----------------VGFEC--------------DLFVQN 170
+ ++ I+ + + G C +LFV
Sbjct: 223 GRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 171 SLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWR 230
++++ Y KC +++ A IF Q ++K + W+ +I+A+ + E L++F EM +
Sbjct: 283 AMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGI-K 341
Query: 231 PEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCL 290
P+ + SV+SAC +LG LD K H + N + + +LI+MY KCG L+ +
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 291 FRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLV 350
F M + +++S MI+ L+MHG+ +ALS+F+ M +E +EP++V +VGVL CSH+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 351 NEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
EG F M EY I P ++HYGC+VDL GRA +L EALE+I+SMP+ N V+W SL+S
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 411 ASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQS 470
A ++H LE+G+ AAK + ++ H VL+SN+YAR QRW DV IR M K + +
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 471 PGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEK 530
G S ++ K ++F+ D+ H + IY + ++ +LK GY PD VL DV+E+EK
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 531 RERLKGHSQKLAIAFALIHLSQGSP------IRIARNLRMCNDCHTYTKLISVIYEREII 584
++ + HS+KLA+ F L++ + IRI +NLR+C DCH + KL+S +YEREII
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREII 701
Query: 585 VRDRKRFHRFKDGTCSCRDYW 605
VRDR RFH +K+G CSCRDYW
Sbjct: 702 VRDRTRFHCYKNGLCSCRDYW 722
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 194/416 (46%), Gaps = 43/416 (10%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP 94
L L CK+L K++HAH+L+ N S L S ++ YA ++F I P
Sbjct: 16 LEKLSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSP 73
Query: 95 G-AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQI 153
+ FN +R + E + Y + G D F+F + KA +K+ AL EGM++
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 154 HGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLW 213
HG FK+ CD FV+ ++MY C ++ +A +F +M + V +W+ +I + GL
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E KLF EM + P+E IL +++SAC G + + + LI N ++ + T+
Sbjct: 194 DEAFKLFEEMKDSNVM-PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQ------------------- 314
L+ MY GC++ FR M+ + + M+SG + G+
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 315 ------------GKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLL---CFDR 359
+EAL +F EM G++PD V V+SAC++ G++++ C
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 360 MKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
LE + ++++ + G L ++ + MP ++N V W S+++A +H
Sbjct: 373 NGLESELSIN----NALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMH 423
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 316/528 (59%), Gaps = 2/528 (0%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G + A +F ++ + +N +I G ++ EE L L+ EM G PD +T ++F
Sbjct: 124 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 183
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
A L+++ G QIHG+ K G E DL V +SL +MY + K++ + + M +++
Sbjct: 184 SGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 243
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
+W+ +I +A NG L L+ M C RP + V+VLS+C+ L G+ H
Sbjct: 244 AWNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQIHAE 302
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
I+ ++ V V +SLI MY KCGCL F D+ ++ +S MIS HGQG EA
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 362
Query: 319 LSIFSEMLRE-GLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVV 377
+ +F+ M + +E ++V ++ +L ACSH+GL ++GL FD M +Y P ++HY CVV
Sbjct: 363 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 422
Query: 378 DLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPS 437
DL+GRAG L +A +I+SMPI+ + V+W++LLSA +H N E+ + K + QI+ + +
Sbjct: 423 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 482
Query: 438 DYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDN 497
YVLL+N++A A+RW DV+++R M K + + G S E +V++F DRS
Sbjct: 483 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKE 542
Query: 498 IYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIR 557
IY + ++ ++K +GY PD + VL D+DE+EK L HS+KLA+AFAL+ L +G+PIR
Sbjct: 543 IYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIR 602
Query: 558 IARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +NLR+C+DCH K ISVI REI +RD RFH F +G CSC DYW
Sbjct: 603 IIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 168/397 (42%), Gaps = 55/397 (13%)
Query: 85 CSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKL 144
CS+ + P + D T I + EA + F + + F ++C
Sbjct: 3 CSV-SSVVRPLSVDPATAIATLCSKGNLREAF----QRFRLNIFTNTSLFTPFIQSCTTR 57
Query: 145 QALKEGMQIHGHVFKVGFECDLFVQNSLINMY-------------GKCEKVEFASA---- 187
Q+L G Q+H + GF D F+ N L++MY G+ K + S+
Sbjct: 58 QSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILI 117
Query: 188 --------------IFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEE 233
+F +M + + +W+A+IA E L LF EM+ + P+E
Sbjct: 118 NGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG-FSPDE 176
Query: 234 SILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRM 293
L SV S L ++ +G+ HG I+ L+++V +SL MY++ G L+ G + R
Sbjct: 177 YTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRS 236
Query: 294 MADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
M + + ++ +I G A +G + L ++ M G P+ + +V VLS+CS + +G
Sbjct: 237 MPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQG 296
Query: 354 LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASK 413
++ V ++ + + G LG+A + +++V+W S++SA
Sbjct: 297 QQIHAE-AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DEDEVMWSSMISAYG 354
Query: 414 VH----------------HNLEIGEIAAKNLFQINSH 434
H N+EI E+A NL SH
Sbjct: 355 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 391
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 35 LTILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI 91
+T+L +C +L + +++HA +K G S+L++ S G + A F +
Sbjct: 281 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM--YSKCGCLGDAAKAFSER 338
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER-GVEPDNFTFPALFKACAKLQALKEG 150
++ ++++I + + +EA+ L+N M E+ +E + F L AC+ +G
Sbjct: 339 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 398
Query: 151 MQIHG-HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS-VASWSAIIAA 206
+++ V K GF+ L ++++ G+ ++ A AI + M K+ + W +++A
Sbjct: 399 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 456
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/636 (34%), Positives = 342/636 (53%), Gaps = 61/636 (9%)
Query: 24 ELNLRLKEQECLTILKTCKNLEEF---KKVHAHVLKWGFFWNPF---CASNLVATCALSH 77
E R + +L C +L K++H + N F C ++ A C
Sbjct: 222 EFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC---- 277
Query: 78 WGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFER------------ 125
G MD A ++F + +N ++ G+ + FE+A+ L+ +M E
Sbjct: 278 -GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 126 -----------------------GVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGF 162
G++P+ T ++ CA + AL G +IH + K +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--Y 394
Query: 163 ECDL---------FVQNSLINMYGKCEKVEFASAIFKQMD--QKSVASWSAIIAAHASNG 211
DL V N LI+MY KC+KV+ A A+F + ++ V +W+ +I ++ +G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 212 LWSECLKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNI-SALNVI 269
++ L+L EM E C RP + L AC L AL +GK H +RN +A+ +
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V LIDMY KCG + +F M K ++T++ +++G MHG G+EAL IF EM R G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ D V + VL ACSH+G++++G+ F+RMK + + P +HY C+VDL+GRAG L A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L LI+ MP++ VVW + LS ++H +E+GE AA+ + ++ S+H Y LLSN+YA A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW DV +IR+ M KG+ + PG S VE + F D++HP IY+++ ++
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY P+ L DVD++EK + L HS+KLA+A+ ++ QG+ IRI +NLR+C DCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T +S I + +II+RD RFH FK+G+CSC+ YW
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 198/425 (46%), Gaps = 53/425 (12%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI--DEPG 95
+ CK + + K +H +L +G S+L++T G + +A S+ R+ + G
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGILTLNL-TSHLIST--YISVGCLSHAVSLLRRFPPSDAG 91
Query: 96 AFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHG 155
+ +N+LIR + + L+L+ M PDN+TFP +FKAC ++ +++ G H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 156 HVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSE 215
GF ++FV N+L+ MY +C + A +F +M V SW++II ++A G
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 216 CLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L++F M NE RP+ LV+VL C LG LGK H + + N+ V L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 276 DMYVKCGCLEKGLCLFRMMA---------------------------DKCQ--------L 300
DMY KCG +++ +F M+ +K Q +
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 301 TYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG--LLCFD 358
T+S ISG A G G EAL + +ML G++P++V + VLS C+ G + G + C+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY- 390
Query: 359 RMKLEYRIVPTVQHYG-------CVVDLMGRAGMLGEALELIQSMPIQQNDVV-WRSLLS 410
++Y I +G ++D+ + + A + S+ ++ DVV W ++
Sbjct: 391 --AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 411 ASKVH 415
H
Sbjct: 449 GYSQH 453
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/610 (36%), Positives = 347/610 (56%), Gaps = 44/610 (7%)
Query: 35 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWG-SMD-YACSIFRQID 92
++ L C NL + K++H HVL+ G + + + L+ T L+ G MD YA + +
Sbjct: 53 ISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRT--LTKLGVPMDPYARRVIEPVQ 110
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
F + +IRG+ E +F+EA+ +Y M + + P +FTF AL KAC ++ L G Q
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG- 211
H F++ C ++V N++I+MY KCE ++ A +F +M ++ V SW+ +IAA+A G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 212 -----------------LWS-------------ECLKLFGEMNNEKCWRPEESILVSVLS 241
W+ E L+ F M R +E + +S
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI-RADEVTVAGYIS 289
Query: 242 ACTHLGALDLGKCTHGSLIRNISALN----VIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
AC LGA I S + V++ ++LIDMY KCG +E+ + +F M +K
Sbjct: 290 ACAQLGASKYAD--RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLC 356
TYS MI GLA HG+ +EAL +F M+ + ++P+ V +VG L ACSH+GLV++G
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 357 FDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHH 416
FD M + + PT HY C+VDL+GR G L EALELI++M ++ + VW +LL A ++H+
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHN 467
Query: 417 NLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFS-L 475
N EI EIAA++LF++ +Y+LLSN+YA A W V ++R + KGL ++P S +
Sbjct: 468 NPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWV 527
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
V+ +++KF + +HP + I + + ++ +L GY PD+S V DV ++ KR L
Sbjct: 528 VDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILI 587
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
H++KLA+AF+L+ ++ S I I +NLRMC DCH + +L S + + II+RD RFH F+
Sbjct: 588 QHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFR 647
Query: 596 DGTCSCRDYW 605
G CSC D+W
Sbjct: 648 SGDCSCGDFW 657
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/527 (38%), Positives = 312/527 (59%), Gaps = 9/527 (1%)
Query: 79 GSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALF 138
G +D A +F + F + ++ G+++ EEA L+++M ER + ++ A+
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAML 319
Query: 139 KACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA 198
+ E M++ +F V ++ N++I Y +C K+ A +F +M ++
Sbjct: 320 AGYVQ----GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 199 SWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGS 258
SW+A+IA ++ +G E L+LF +M E R S S LS C + AL+LGK HG
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGR 434
Query: 259 LIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEA 318
L++ V +L+ MY KCG +E+ LF+ MA K ++++ MI+G + HG G+ A
Sbjct: 435 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVA 494
Query: 319 LSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
L F M REGL+PDD V VLSACSH GLV++G F M +Y ++P QHY C+VD
Sbjct: 495 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVD 554
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSD 438
L+GRAG+L +A L+++MP + + +W +LL AS+VH N E+ E AA +F + +
Sbjct: 555 LLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 614
Query: 439 YVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNI 498
YVLLSN+YA + RW DV K+R M KG+ + PG+S +E+ K + F D HP D I
Sbjct: 615 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 674
Query: 499 YEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRI 558
+ + +++ ++K GY S VL DV+E+EK ++ HS++LA+A+ ++ +S G PIR+
Sbjct: 675 FAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 734
Query: 559 ARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K ++ I R II+RD RFH FKDG+CSC DYW
Sbjct: 735 IKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 159/352 (45%), Gaps = 30/352 (8%)
Query: 70 VATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEP 129
VA + G + A +F+++ + +N +I G+++ EFE A L++EM ER
Sbjct: 69 VAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER---- 124
Query: 130 DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIF 189
D ++ + K + + L + ++ F++ E D+ N++++ Y + V+ A ++F
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKAREL----FEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 190 KQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGAL 249
+M +K+ SW+A+++A+ N E LF N W LVS C G +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSREN---W-----ALVSW--NCLLGGFV 230
Query: 250 DLGKCTHG-SLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
K +++ +V+ ++I Y + G +++ LF + T++ M+SG
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 309 LAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVP 368
+ +EA +F +M E ++V + +L+ + FD M
Sbjct: 291 YIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----- 341
Query: 369 TVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA-SKVHHNLE 419
V + ++ + G + EA L MP +++ V W ++++ S+ H+ E
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFE 392
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 156/374 (41%), Gaps = 53/374 (14%)
Query: 84 ACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAK 143
A +F + E +NT++ G+ + ++A +F+R E ++ ++ AL A +
Sbjct: 145 ARELFEIMPERDVCSWNTMLSGYAQNGCVDDA----RSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 144 LQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAI 203
++E + FK L N L+ + K +K+ A F M+ + V SW+ I
Sbjct: 201 NSKMEEACML----FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTI 256
Query: 204 IAAHASNGLWSECLKLFGE--MNNEKCWR----------------------PEESILV-- 237
I +A +G E +LF E + + W PE + +
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWN 316
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
++L+ +++ K L + NV ++I Y +CG + + LF M +
Sbjct: 317 AMLAGYVQGERMEMAK----ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 298 CQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCF 357
++++ MI+G + G EAL +F +M REG + + LS C+ + G
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG---- 428
Query: 358 DRMKLEYRIVPTVQHYGCVVD-----LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSAS 412
+L R+V GC V + + G + EA +L + M ++ V W ++++
Sbjct: 429 --KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGY 485
Query: 413 KVHHNLEIGEIAAK 426
H GE+A +
Sbjct: 486 SRHG---FGEVALR 496
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 125/296 (42%), Gaps = 46/296 (15%)
Query: 163 ECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGE 222
+ D+ N I+ Y + + A +FK+M + S S++ +I+ + NG + KLF E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 223 MNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCG 282
M PE ++ + ++ +LGK L + +V +++ Y + G
Sbjct: 121 M-------PERDLVSWNVMIKGYVRNRNLGKARE--LFEIMPERDVCSWNTMLSGYAQNG 171
Query: 283 CLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIF-------------------- 322
C++ +F M +K ++++ ++S + + +EA +F
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVK 231
Query: 323 ------SEMLREGLEPDDVV-YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGC 375
+ + + DVV + +++ + +G ++E FD ++ T G
Sbjct: 232 KKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGY 291
Query: 376 VVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQI 431
+ + M+ EA EL MP ++N+V W ++L+ +E+ AK LF +
Sbjct: 292 IQNR-----MVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEM----AKELFDV 337
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/576 (36%), Positives = 336/576 (58%), Gaps = 13/576 (2%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFR 89
T+LK C K L + + VHAH+L+ F + + N+ A C GS++ A +F
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC-----GSLEEARKVFE 119
Query: 90 QIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
++ + + TLI G+ + +AL +N+M G P+ FT ++ KA A +
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+HG K GF+ ++ V ++L+++Y + ++ A +F ++ ++ SW+A+IA HA
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ L+LF M + +RP S+ AC+ G L+ GK H +I++ L
Sbjct: 240 RSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+L+DMY K G + +F +A + ++++ +++ A HG GKEA+ F EM R G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
+ P+++ ++ VL+ACSH+GL++EG ++ MK + IVP HY VVDL+GRAG L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
L I+ MPI+ +W++LL+A ++H N E+G AA+++F+++ P +V+L N+YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
RW D A++R +M G+ + P S VE+ ++ FV+ D HP + I ++ ++
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 510 KFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCH 569
K GY PD S V+ VD+ E+ L+ HS+K+A+AFAL++ GS I I +N+R+C DCH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597
Query: 570 TYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
T KL S + REIIVRD RFH FKDG CSC+DYW
Sbjct: 598 TAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERG---------VEPDNFTFPALFKACAKLQALKE 149
N+L ++ E E F N++ R + D + L K C + L +
Sbjct: 19 LNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQ 78
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G +H H+ + F D+ + N+L+NMY KC +E A +F++M Q+ +W+ +I+ ++
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ + L F +M + P E L SV+ A G HG ++ NV
Sbjct: 139 HDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V ++L+D+Y + G ++ +F + + ++++ +I+G A ++AL +F MLR+G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGE 388
P Y + ACS G + +G M K ++V + ++D+ ++G + +
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN--TLLDMYAKSGSIHD 315
Query: 389 ALELIQSMPIQQNDVVWRSLLSASKVH 415
A ++ + +++ V W SLL+A H
Sbjct: 316 ARKIFDRLA-KRDVVSWNSLLTAYAQH 341
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/629 (34%), Positives = 344/629 (54%), Gaps = 48/629 (7%)
Query: 12 LLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEEFKKVHAHVLKWGF-----FWN---- 62
LL + ++PP NL + + + LEE KKVH H+ GF WN
Sbjct: 76 LLGRAKKPPASTYCNL-------IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 63 ---------------------PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNT 101
C+ N++ + G ++ A +F ++ E ++ +
Sbjct: 129 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVN-GYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 102 LIRGFVKEVEFEEALFLYNEMFE-RGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKV 160
++ G+VK+ + EEAL LY+ M P+ FT A A ++ ++ G +IHGH+ +
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 161 GFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLF 220
G + D + +SL++MYGKC ++ A IF ++ +K V SW+++I + + W E LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 221 GEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVK 280
E+ C RP E VL+AC L +LGK HG + R +SL+DMY K
Sbjct: 308 SELVGS-CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 281 CGCLEKGLCLFRMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
CG +E + + D C ++++ +I G A +GQ EAL F +L+ G +PD V
Sbjct: 367 CGNIESA----KHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
+V VLSAC+HAGLV +GL F + ++R+ T HY C+VDL+ R+G + +I M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVA 456
P++ + +W S+L + N+++ E AA+ LF+I +P YV ++N+YA A +W +
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542
Query: 457 KIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSP 516
K+R M G+ + PG S E+ RK + F++ D SHP ++ I E + ++ ++K EGY P
Sbjct: 543 KMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVP 602
Query: 517 DISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLIS 576
S VL DV++++K E L HS+KLA+AFA++ +G+ I++ +NLR C DCH K IS
Sbjct: 603 ATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFIS 662
Query: 577 VIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I +R+I VRD RFH F++G CSC DYW
Sbjct: 663 NITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 33/322 (10%)
Query: 121 EMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
++ R +P T+ L + C++ +AL+EG ++H H+ GF + + N L+ MY KC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 181 KVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCW----------- 229
+ A +F +M + + SW+ ++ +A GL E KLF EM + +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 230 --RPEESILVSVL------------------SACTHLGALDLGKCTHGSLIRNISALNVI 269
+PEE++++ L +A + + GK HG ++R + +
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
+ +SL+DMY KCGC+++ +F + +K ++++ MI + +E S+FSE++
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
P++ + GVL+AC+ G M P +VD+ + G + A
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 390 LELIQSMPIQQNDVVWRSLLSA 411
++ P + + V W SL+
Sbjct: 374 KHVVDGCP-KPDLVSWTSLIGG 394
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/573 (36%), Positives = 318/573 (55%), Gaps = 6/573 (1%)
Query: 36 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+ILKTC +LE +++H+ ++K F N + S L+ A G +D A I +
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA--KLGKLDTAWDILIRFA 552
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ T+I G+ + ++AL + +M +RG+ D ACA LQALKEG Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
IH GF DL QN+L+ +Y +C K+E + F+Q + +W+A+++ +G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
E L++F MN E S + A + + GK H + + V
Sbjct: 673 NEEALRVFVRMNREGI-DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI MY KCG + F ++ K +++++ +I+ + HG G EAL F +M+ + P
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
+ V VGVLSACSH GLV++G+ F+ M EY + P +HY CVVD++ RAG+L A E
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ MPI+ + +VWR+LLSA VH N+EIGE AA +L ++ + YVLLSN+YA +++W
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 911
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
R +M KG+ + PG S +EV ++ F D++HP D I+E + +
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY D +L ++ ++K + HS+KLAI+F L+ L PI + +NLR+CNDCH +
Sbjct: 972 GYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWI 1031
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K +S + REIIVRD RFH F+ G CSC+DYW
Sbjct: 1032 KFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 36 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L CK +E + ++H VLK GF + + + LV+ H G++ A IF +
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGNLISAEHIFSNMS 350
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ A +NTLI G + E+A+ L+ M G+EPD+ T +L AC+ L G Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K+GF + ++ +L+N+Y KC +E A F + + ++V W+ ++ A+
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++F +M E+ P + S+L C LG L+LG+ H +I+ LN V +
Sbjct: 471 LRNSFRIFRQMQIEEI-VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
LIDMY K G L+ + A K ++++ MI+G + +AL+ F +ML G+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 333 DDVVYVGVLSACSHAGLVNEG 353
D+V +SAC+ + EG
Sbjct: 590 DEVGLTNAVSACAGLQALKEG 610
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 176/376 (46%), Gaps = 8/376 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
LKT +L+E +K+H+ +LK G N + L G + A +F ++ E F
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMPERTIF 152
Query: 98 DFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKAC-AKLQALKEGMQIHGH 156
+N +I+ E L+ M V P+ TF + +AC A QIH
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ G V N LI++Y + V+ A +F + K +SW A+I+ + N +E
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEA 272
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
++LF +M P SVLSAC + +L++G+ HG +++ + + V +L+
Sbjct: 273 IRLFCDMYVLGIM-PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
+Y G L +F M+ + +TY+ +I+GL+ G G++A+ +F M +GLEPD
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 337 YVGVLSACSHAGLVNEG-LLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
++ ACS G + G L KL + ++ G +++L + + AL+
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETALDYFLE 449
Query: 396 MPIQQNDVVWRSLLSA 411
+ +N V+W +L A
Sbjct: 450 TEV-ENVVLWNVMLVA 464
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 183/392 (46%), Gaps = 20/392 (5%)
Query: 37 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+L+ C+ + +++HA +L G + + L+ S G +D A +F +
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL--YSRNGFVDLARRVFDGLR 249
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+ +I G K EA+ L+ +M+ G+ P + F ++ AC K+++L+ G Q
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+HG V K+GF D +V N+L+++Y + A IF M Q+ +++ +I + G
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
+ ++LF M+ + P+ + L S++ AC+ G L G+ H + A N +E
Sbjct: 370 GEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+L+++Y KC +E L F + + ++VM+ + + + IF +M E + P
Sbjct: 429 ALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 488
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPT---VQHYGC--VVDLMGRAGMLG 387
+ Y +L C G + G ++ +I+ T + Y C ++D+ + G L
Sbjct: 489 NQYTYPSILKTCIRLGDLELG------EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 388 EALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
A +++ + DVV + + A +N +
Sbjct: 543 TAWDIL--IRFAGKDVVSWTTMIAGYTQYNFD 572
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 18/251 (7%)
Query: 168 VQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEK 227
V +S I ++G K++ +F + AS++AI + + + E K + N +
Sbjct: 23 VSSSFIFIHGVPRKLK-TRTVFPTLCGTRRASFAAISVYISEDESFQE--KRIDSVEN-R 78
Query: 228 CWRPEESILVSVLSACTHL-GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEK 286
RP L +L C G+LD G+ H +++ N + L D Y+ G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 287 GLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSH 346
+F M ++ T++ MI LA E +F M+ E + P++ + GVL AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-- 196
Query: 347 AGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVV-----DLMGRAGMLGEALELIQSMPIQQ 400
G + FD + ++ RI+ VV DL R G + A + + ++
Sbjct: 197 ----RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 401 NDVVWRSLLSA 411
+ W +++S
Sbjct: 253 HS-SWVAMISG 262
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/592 (35%), Positives = 335/592 (56%), Gaps = 18/592 (3%)
Query: 22 GPELNLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW 78
GPE+ + +L C + L + ++VHAH++K + + + L L +
Sbjct: 47 GPEMGFHGYD----ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRL-----LIFY 97
Query: 79 GSMD---YACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFP 135
G D A + ++ E + +I + + EAL ++ EM +P+ FTF
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 136 ALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQK 195
+ +C + L G QIHG + K ++ +FV +SL++MY K +++ A IF+ + ++
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
Query: 196 SVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCT 255
V S +AIIA +A GL E L++F +++E P S+L+A + L LD GK
Sbjct: 218 DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-MSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 256 HGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQG 315
H ++R +++ SLIDMY KCG L LF M ++ ++++ M+ G + HG G
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 316 KEALSIFSEMLREG-LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKL-EYRIVPTVQHY 373
+E L +F M E ++PD V + VLS CSH + + GL FD M EY P +HY
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 374 GCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINS 433
GC+VD++GRAG + EA E I+ MP + V SLL A +VH +++IGE + L +I
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 434 HHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHP 493
+ +YV+LSN+YA A RW DV +R M K + + PG S ++ + ++ F + DR+HP
Sbjct: 457 ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHP 516
Query: 494 AWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQG 553
+ + + ++ ++K GY PD+S VL DVDE++K + L GHS+KLA+ F LI +G
Sbjct: 517 RREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEG 576
Query: 554 SPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
PIR+ +NLR+C DCH + K+ S ++ERE+ +RD+ RFH+ DG CSC DYW
Sbjct: 577 IPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 159/305 (52%), Gaps = 8/305 (2%)
Query: 112 FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNS 171
+EAL EM G E + AL AC +AL++G ++H H+ K + +++
Sbjct: 36 LQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTR 92
Query: 172 LINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRP 231
L+ YGKC+ +E A + +M +K+V SW+A+I+ ++ G SE L +F EM +P
Sbjct: 93 LLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD-GKP 151
Query: 232 EESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLF 291
E +VL++C L LGK HG +++ ++ V +SL+DMY K G +++ +F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 292 RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVN 351
+ ++ ++ + +I+G A G +EAL +F + EG+ P+ V Y +L+A S L++
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLD 271
Query: 352 EGLLCF-DRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLS 410
G ++ E +Q+ ++D+ + G L A L +MP ++ + W ++L
Sbjct: 272 HGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLV 328
Query: 411 ASKVH 415
H
Sbjct: 329 GYSKH 333
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 328/586 (55%), Gaps = 14/586 (2%)
Query: 27 LRLKEQECLTILKTCKNLEE----FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMD 82
L+ + ++LK +L E K+VH H +K + F ++ L+ A S M
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID--AYSRNRCMK 469
Query: 83 YACSIFRQIDEPGAFDF---NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFK 139
A +F E FD N ++ G+ + + + L L+ M ++G D+FT +FK
Sbjct: 470 EAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 140 ACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS 199
C L A+ +G Q+H + K G++ DL+V + +++MY KC + A F + +
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 200 WSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSL 259
W+ +I+ NG +F +M P+E + ++ A + L AL+ G+ H +
Sbjct: 586 WTTMISGCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 260 IRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEAL 319
++ + V TSL+DMY KCG ++ CLF+ + ++ M+ GLA HG+GKE L
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 320 SIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDL 379
+F +M G++PD V ++GVLSACSH+GLV+E M +Y I P ++HY C+ D
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 380 MGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDY 439
+GRAG++ +A LI+SM ++ + ++R+LL+A +V + E G+ A L ++ S Y
Sbjct: 765 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY 824
Query: 440 VLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIY 499
VLLSNMYA A +W ++ RT M + + PGFS +EV K++ FV DRS+ + IY
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Query: 500 EMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIA 559
+ M +K EGY P+ L DV+E+EK L HS+KLA+AF L+ +PIR+
Sbjct: 885 RKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVI 944
Query: 560 RNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
+NLR+C DCH K I+ +Y REI++RD RFHRFKDG CSC DYW
Sbjct: 945 KNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 100 NTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFK 159
N + ++ ++ L + +M E VE D TF + K+ +L G Q+H K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 160 VGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKL 219
+G + L V NSLINMY K K FA +F M ++ + SW+++IA A NGL E + L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 220 FGEMNNEKC-WRPEESILVSVLSACTHLG-ALDLGKCTHGSLIRNISALNVIVETSLIDM 277
F M +C +P++ + SVL A + L L L K H I+ + + V T+LID
Sbjct: 404 F--MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 278 YVKCGCLEKGLCLF-RMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
Y + C+++ LF R D + ++ M++G G + L +F+ M ++G DD
Sbjct: 462 YSRNRCMKEAEILFERHNFD--LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 337 YVGVLSACSHAGLVNEGLLCFD-RMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
V C +N+G +K Y + V ++D+ + G + A S
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDS 577
Query: 396 MPIQQNDVVWRSLLSA 411
+P+ +DV W +++S
Sbjct: 578 IPV-PDDVAWTTMISG 592
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G H + + F+ N+LI+MY KC + +A +F +M + + SW++I+AA+A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 210 NGLWSECLK--------LFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIR 261
+ SEC+ LF + + + + L +L C H G + + HG +
Sbjct: 118 S---SECVVENIQQAFLLFRILRQDVVYTSRMT-LSPMLKLCLHSGYVWASESFHGYACK 173
Query: 262 NISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSI 321
+ V +L+++Y+K G +++G LF M + + +++M+ G +EA+ +
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 322 FSEMLREGLEPDDVV 336
S GL P+++
Sbjct: 234 SSAFHSSGLNPNEIT 248
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 40 TCKNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEPGAF 97
T +L K HA +L F NP F +NL++ S GS+ YA +F ++ +
Sbjct: 51 TSSDLMLGKCTHARILT--FEENPERFLINNLISM--YSKCGSLTYARRVFDKMPDRDLV 106
Query: 98 DFNTLIRGFVKEVE-----FEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N+++ + + E ++A L+ + + V T + K C +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
HG+ K+G + D FV +L+N+Y K KV+ +F++M + V W+ ++ A+ G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 213 WSECLKL 219
E + L
Sbjct: 227 KEEAIDL 233
Score = 40.4 bits (93), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 23/176 (13%)
Query: 249 LDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISG 308
L LGKCTH ++ + +LI MY KCG L +F M D+ ++++ S
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWN---SI 111
Query: 309 LAMHGQGKEAL--SIFSEMLREGLEPDDVVYVG------VLSACSHAGLV-----NEGLL 355
LA + Q E + +I L + DVVY +L C H+G V G
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSA 411
C + + + G +V++ + G + E L + MP ++ V+W +L A
Sbjct: 172 CKIGLDGDEFVA------GALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/550 (38%), Positives = 308/550 (56%), Gaps = 40/550 (7%)
Query: 96 AFDFNTLIRGFVKEVEFEE---ALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+F +N +IR V V + + +Y M V PD TFP L + L G +
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
H + G + D FV+ SL+NMY C + A +F K + +W++++ A+A GL
Sbjct: 84 THAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 213 WSECLKLFGEMN-----------------------------------NEKCWRPEESILV 237
+ KLF EM NE RP E +
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADK 297
+VLSAC LGAL+ GK H + + +++++ T+LIDMY KCG LE+ +F + K
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 298 CQL-TYSVMISGLAMHGQGKEALSIFSEML-REGLEPDDVVYVGVLSACSHAGLVNEGLL 355
+ YS MI LAM+G E +FSEM + + P+ V +VG+L AC H GL+NEG
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 356 CFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVH 415
F M E+ I P++QHYGC+VDL GR+G++ EA I SMP++ + ++W SLLS S++
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 416 HNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSL 475
+++ E A K L +++ + YVLLSN+YA+ RW +V IR EM KG+N+ PG S
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSY 443
Query: 476 VEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLK 535
VEV V++FV D S + IY M+ ++ +L+ GY D +VL D++E +K L
Sbjct: 444 VEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALS 503
Query: 536 GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFK 595
HS+KLAIAF L+ G+P+RI +NLR+C DCH K+IS ++ REI+VRD RFH F+
Sbjct: 504 YHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFR 563
Query: 596 DGTCSCRDYW 605
DG+CSCRD+W
Sbjct: 564 DGSCSCRDFW 573
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 37/306 (12%)
Query: 48 KKVHAHVLKWGFFWNPFCAS---NLVATCA----------------LSHWGS-------- 80
++ HA +L +G +PF + N+ ++C L W S
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 81 --MDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEM-----FERGVEPDNFT 133
+D A +F ++ E ++ LI G+V +++EAL L+ EM E V P+ FT
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 134 FPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQM- 192
+ AC +L AL++G +H ++ K E D+ + +LI+MY KC +E A +F +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 193 DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLG 252
+K V ++SA+I A GL EC +LF EM P V +L AC H G ++ G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 253 KCTHGSLIRNISALNVIVETS-LIDMYVKCGCLEKGLCLFRMMA-DKCQLTYSVMISGLA 310
K +I I ++D+Y + G +++ M + L + ++SG
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 311 MHGQGK 316
M G K
Sbjct: 382 MLGDIK 387
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/539 (40%), Positives = 323/539 (59%), Gaps = 11/539 (2%)
Query: 68 NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGV 127
N++ +C + + + + A S F ++ A +NT+I G+ + E E+A E+F +
Sbjct: 128 NIMLSCYVRN-VNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKA----RELFYSMM 182
Query: 128 EPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASA 187
E + ++ A+ + L++ H FKV + ++I Y K +KVE A A
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 188 IFKQMD-QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHL 246
+FK M K++ +W+A+I+ + N + LKLF M E RP S L S L C+ L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI-RPNSSGLSSALLGCSEL 297
Query: 247 GALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMI 306
AL LG+ H + ++ +V TSLI MY KCG L LF +M K + ++ MI
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 307 SGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRI 366
SG A HG +AL +F EM+ + PD + +V VL AC+HAGLVN G+ F+ M +Y++
Sbjct: 358 SGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV 417
Query: 367 VPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAK 426
P HY C+VDL+GRAG L EAL+LI+SMP + + V+ +LL A +VH N+E+ E AA+
Sbjct: 418 EPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477
Query: 427 NLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFV 486
L Q+NS + + YV L+N+YA RW DVA++R M + + PG+S +E+ KV+ F
Sbjct: 478 KLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFR 537
Query: 487 SQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFA 546
S DR HP D+I++ + ++E ++K GY P++ L +V+E++K + L HS+KLA+AF
Sbjct: 538 SSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFG 597
Query: 547 LIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
I L QGS I++ +NLR+C DCH K IS I +REIIVRD RFH FKDG+CSC DYW
Sbjct: 598 CIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 43/341 (12%)
Query: 92 DEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
D+ F N +I V+ + + AL +++ M + N + K +++ M
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRM------M 110
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+ H +F E D F N +++ Y + E A + F +M K ASW+ +I +A G
Sbjct: 111 EAH-QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRG 169
Query: 212 LWSECLKLFGEM--NNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
+ +LF M NE W +++S G DL K +H + V+
Sbjct: 170 EMEKARELFYSMMEKNEVSWN-------AMISGYIECG--DLEKASH--FFKVAPVRGVV 218
Query: 270 VETSLIDMYVKCGCLEKGLCLFR-MMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE 328
T++I Y+K +E +F+ M +K +T++ MISG + + ++ L +F ML E
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 329 GLEPDDVVYVGVLSACSHAG----------LVNEGLLCFDRMKLEYRIVPTVQHYGCVVD 378
G+ P+ L CS +V++ LC D V ++
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCND-----------VTALTSLIS 327
Query: 379 LMGRAGMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLE 419
+ + G LG+A +L + M +++ V W +++S H N +
Sbjct: 328 MYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 367
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 335/574 (58%), Gaps = 7/574 (1%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++L+ C +L + K ++ ++LK GF + L+ A G M A +F ++
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYA--KCGDMITARDVFNSME 369
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
+N++I G+++ + EA+ L+ M + D+ T+ L +L LK G
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H + K G DL V N+LI+MY KC +V + IF M +W+ +I+A G
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVET 272
++ L++ +M + P+ + + L C L A LGK H L+R + +
Sbjct: 490 FATGLQVTTQMRKSEVV-PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 273 SLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEP 332
+LI+MY KCGCLE +F M+ + +T++ MI M+G+G++AL F++M + G+ P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 333 DDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALEL 392
D VV++ ++ ACSH+GLV+EGL CF++MK Y+I P ++HY CVVDL+ R+ + +A E
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 393 IQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
IQ+MPI+ + +W S+L A + ++E E ++ + ++N P +L SN YA ++W
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
V+ IR + K + ++PG+S +EV + V+ F S D S P + IY+ + + + E
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 513 GYSPDISQVLRDVDEDEKRERLK-GHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTY 571
GY PD +V ++++E+E++ RL GHS++LAIAF L++ G+P+++ +NLR+C DCH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 572 TKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
TKLIS I REI+VRD RFH FKDGTCSC+D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 197/377 (52%), Gaps = 11/377 (2%)
Query: 38 LKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEP-GA 96
L + NL E +++HA V+ G + F + L+ SH+ + S+FR++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDK--YSHFREPASSLSVFRRVSPAKNV 71
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
+ +N++IR F K F EAL Y ++ E V PD +TFP++ KACA L + G ++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
+ +GFE DLFV N+L++MY + + A +F +M + + SW+++I+ ++S+G + E
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 217 LKLFGEMNNEKCW-RPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLI 275
L+++ E+ N W P+ + SVL A +L + G+ HG +++ V+V L+
Sbjct: 192 LEIYHELKNS--WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 276 DMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDV 335
MY+K +F M + ++Y+ MI G +E++ +F E L + +PD +
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLL 308
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRM-KLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQ 394
VL AC H ++ ++ M K + + TV++ ++D+ + G + A ++
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDMITARDVFN 366
Query: 395 SMPIQQNDVVWRSLLSA 411
SM ++ V W S++S
Sbjct: 367 SMEC-KDTVSWNSIISG 382
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 174/366 (47%), Gaps = 15/366 (4%)
Query: 87 IFRQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQA 146
+F ++D + +NT+I G++K EE++ ++ E ++ +PD T ++ +AC L+
Sbjct: 264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRD 322
Query: 147 LKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAA 206
L I+ ++ K GF + V+N LI++Y KC + A +F M+ K SW++II+
Sbjct: 323 LSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISG 382
Query: 207 HASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL 266
+ +G E +KLF M + + + + ++S T L L GK H + I++ +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIME-EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICI 441
Query: 267 NVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEML 326
++ V +LIDMY KCG + L +F M +T++ +IS G L + ++M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 327 REGLEPDDVVYVGVLSACSHAG---LVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRA 383
+ + PD ++ L C+ L E C R E + Q ++++ +
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL----QIGNALIEMYSKC 557
Query: 384 GMLGEALELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHH--PSDYVL 441
G L + + + M +++ V W ++ A ++ GE A + + P V
Sbjct: 558 GCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVF 613
Query: 442 LSNMYA 447
++ +YA
Sbjct: 614 IAIIYA 619
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 135 PALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMD- 193
P + +A + L E +IH V +G + F LI+ Y + + ++F+++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 194 QKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGK 253
K+V W++II A + NGL+ E L+ +G++ K P++ SV+ AC L ++G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKV-SPDKYTFPSVIKACAGLFDAEMGD 126
Query: 254 CTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHG 313
+ ++ ++ V +L+DMY + G L + +F M + ++++ +ISG + HG
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 314 QGKEALSIFSEMLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+EAL I+ E+ + PD VL A + +V +G
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 317/563 (56%), Gaps = 11/563 (1%)
Query: 48 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM---DYACSIFRQIDEPGAFDFNTLIR 104
K++HA +K G + F V A + D A +F +I E +N I
Sbjct: 128 KQIHALAVKCGRILDVF-----VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 105 GFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFEC 164
V + EA+ + E P++ TF A AC+ L GMQ+HG V + GF+
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 165 DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN 224
D+ V N LI+ YGKC+++ + IF +M K+ SW +++AA+ N + L+ +
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-S 301
Query: 225 NEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCL 284
+ + ++ SVLSAC + L+LG+ H ++ + V ++L+DMY KCGC+
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 285 EKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGL--EPDDVVYVGVLS 342
E F M +K +T + +I G A GQ AL++F EM G P+ + +V +LS
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 343 ACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQND 402
ACS AG V G+ FD M+ Y I P +HY C+VD++GRAGM+ A E I+ MPIQ
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
Query: 403 VVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWYDVAKIRTEM 462
VW +L +A ++H ++G +AA+NLF+++ ++VLLSN +A A RW + +R E+
Sbjct: 482 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Query: 463 ASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEGYSPDISQVL 522
G+ + G+S + V +V+ F ++DRSH I + ++ +++ GY PD+ L
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSL 601
Query: 523 RDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTKLISVIYERE 582
D++E+EK + HS+KLA+AF L+ L PIRI +NLR+C DCH++ K +S +RE
Sbjct: 602 YDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKRE 661
Query: 583 IIVRDRKRFHRFKDGTCSCRDYW 605
IIVRD RFHRFKDG CSC+DYW
Sbjct: 662 IIVRDNNRFHRFKDGICSCKDYW 684
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 171/367 (46%), Gaps = 14/367 (3%)
Query: 50 VHAHVLK-WGFFWNPFCASNLVATCALSHWGSMDYACS---IFRQIDEPGAFDFNTLIRG 105
VHA ++K PF A+ L+ + + +D+ S + R + +LI G
Sbjct: 28 VHARIVKTLDSPPPPFLANYLI-----NMYSKLDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 106 FVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECD 165
+ F AL + EM GV P++FTFP FKA A L+ G QIH K G D
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 166 LFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMNN 225
+FV S +MY K + A +F ++ ++++ +W+A I+ ++G E ++ F E
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 226 EKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLE 285
P + L+AC+ L+LG HG ++R+ +V V LID Y KC +
Sbjct: 203 ID-GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 286 KGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M K +++ +++ + + ++A ++ ++ +E D + VLSAC+
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 346 H-AGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQQNDVV 404
AGL E ++ + T+ +VD+ G+ G + ++ + MP ++N V
Sbjct: 322 GMAGL--ELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVT 378
Query: 405 WRSLLSA 411
SL+
Sbjct: 379 RNSLIGG 385
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 340/580 (58%), Gaps = 13/580 (2%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCA-SNLVATCALSHWGSMDYACSIFRQI 91
++ C LE K++H+ ++ G + C+ ++ A C+ GS+D +F ++
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSAD--GSVDDCRKVFDRM 331
Query: 92 DEPGAFDFNTLIRGFVKEVEF-EEALFLYNEMFERG-VEPDNFTFPALFKACAKLQALKE 149
++ + LI G++K EA+ L++EM +G VEP++FTF + FKAC L +
Sbjct: 332 EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRV 391
Query: 150 GMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHAS 209
G Q+ G FK G + V NS+I+M+ K +++E A F+ + +K++ S++ +
Sbjct: 392 GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 210 NGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVI 269
N + + KL E+ E+ S+LS ++G++ G+ H +++ + N
Sbjct: 452 NLNFEQAFKLLSEIT-ERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 270 VETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREG 329
V +LI MY KCG ++ +F M ++ ++++ MI+G A HG L F++M+ EG
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 330 LEPDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEA 389
++P++V YV +LSACSH GLV+EG F+ M +++I P ++HY C+VDL+ RAG+L +A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 390 LELIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARA 449
E I +MP Q + +VWR+ L A +VH N E+G++AA+ + +++ + P+ Y+ LSN+YA A
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 450 QRWYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQL 509
+W + ++R +M + L + G S +EV K++KF D +HP IY+ + ++ ++
Sbjct: 691 GKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Query: 510 KFEGYSPDISQVLRDVDEDEKRER----LKGHSQKLAIAFALIHLSQGSPIRIARNLRMC 565
K GY PD VL ++E+ L HS+K+A+AF LI S+ P+R+ +NLR+C
Sbjct: 751 KRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVC 810
Query: 566 NDCHTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
DCH K IS + REI++RD RFH FKDG CSC DYW
Sbjct: 811 GDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 149/329 (45%), Gaps = 12/329 (3%)
Query: 34 CLT-ILKTCKNLEEFKKVH----AHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIF 88
C T +++ C N +F V ++K G F + C + + S + A +F
Sbjct: 168 CYTAVIRACSN-SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVF 226
Query: 89 RQIDEPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALK 148
++ E + +I ++ EA+ + +M G E D FT ++F ACA+L+ L
Sbjct: 227 DKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLS 286
Query: 149 EGMQIHGHVFKVGFECDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSVASWSAIIA 205
G Q+H + G D V+ SL++MY KC V+ +F +M+ SV SW+A+I
Sbjct: 287 LGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 206 AHASN-GLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNIS 264
+ N L +E + LF EM + P S AC +L +GK G +
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 265 ALNVIVETSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSE 324
A N V S+I M+VK +E F +++K ++Y+ + G + ++A + SE
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 325 MLREGLEPDDVVYVGVLSACSHAGLVNEG 353
+ L + +LS ++ G + +G
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKG 493
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 160/324 (49%), Gaps = 18/324 (5%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
++LK+C +F K VHA ++++ + ++L++ S G A +F +
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISL--YSKSGDSAKAEDVFETMR 124
Query: 93 EPGAFD---FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKE 149
G D ++ ++ + +A+ ++ E E G+ P+++ + A+ +AC+ +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 150 GMQIHGHVFKVG-FECDLFVQNSLINMYGKCEK-VEFASAIFKQMDQKSVASWSAIIAAH 207
G G + K G FE D+ V SLI+M+ K E E A +F +M + +V +W+ +I
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 208 ASNGLWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALN 267
G E ++ F +M + ++ L SV SAC L L LGK H IR S L
Sbjct: 245 MQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIR--SGLV 301
Query: 268 VIVETSLIDMYVKC---GCLEKGLCLFRMMADKCQLTYSVMISGLAMH-GQGKEALSIFS 323
VE SL+DMY KC G ++ +F M D ++++ +I+G + EA+++FS
Sbjct: 302 DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 324 EMLREG-LEPDDVVYVGVLSACSH 346
EM+ +G +EP+ + AC +
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGN 385
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 7/230 (3%)
Query: 122 MFERGVEP-DNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCE 180
M G+ P D+ TF +L K+C + + + G +H + + E D + NSLI++Y K
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 181 KVEFASAIFKQM---DQKSVASWSAIIAAHASNGLWSECLKLFGEMNNEKCWRPEESILV 237
A +F+ M ++ V SWSA++A + +NG + +K+F E E P +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEF-LELGLVPNDYCYT 170
Query: 238 SVLSACTHLGALDLGKCTHGSLIRNIS-ALNVIVETSLIDMYVKC-GCLEKGLCLFRMMA 295
+V+ AC++ + +G+ T G L++ +V V SLIDM+VK E +F M+
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 296 DKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+ +T+++MI+ G +EA+ F +M+ G E D V SAC+
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 230 RPEESI-LVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLIDMYVKCGCLEKGL 288
RP +S+ S+L +C LGK H LI + ++ SLI +Y K G K
Sbjct: 58 RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE 117
Query: 289 CLFRMM---ADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVGVLSACS 345
+F M + +++S M++ +G+ +A+ +F E L GL P+D Y V+ ACS
Sbjct: 118 DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 346 HAGLVNEG 353
++ V G
Sbjct: 178 NSDFVGVG 185
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/572 (35%), Positives = 319/572 (55%), Gaps = 40/572 (6%)
Query: 73 CALSHWGSMDYACSIFRQIDEPGA----FDFNTLIRGFVKEVEFEEALFLYNEMFERGVE 128
CA + G ++ I +++ G +N ++ GF + +EA+ ++ ++ G
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 129 PDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAI 188
PD T ++ + + L G IHG+V K G D V +++I+MYGK V ++
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 189 FKQMD-----------------------------------QKSVASWSAIIAAHASNGLW 213
F Q + + +V SW++IIA A NG
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 214 SECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETS 273
E L+LF EM +P + S+L AC ++ AL G+ THG +R NV V ++
Sbjct: 370 IEALELFREMQVAGV-KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 274 LIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPD 333
LIDMY KCG + +F MM K + ++ +++G +MHG+ KE +SIF ++R L+PD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 334 DVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELI 393
+ + +LSAC GL +EG F M EY I P ++HY C+V+L+GRAG L EA +LI
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 394 QSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRWY 453
+ MP + + VW +LL++ ++ +N+++ EIAA+ LF + +P YVLLSN+YA W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 454 DVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFEG 513
+V IR +M S GL ++PG S ++V +VY ++ D+SHP D I E + ++ +++ G
Sbjct: 609 EVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Query: 514 YSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYTK 573
+ P++ L DV+E E+ + L GHS+KLA+ F L++ G+P+++ +NLR+C DCH K
Sbjct: 669 HRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIK 728
Query: 574 LISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
IS REI +RD RFH FKDG CSC D+W
Sbjct: 729 FISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 195/436 (44%), Gaps = 73/436 (16%)
Query: 49 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNTLIRGFVK 108
+ HA +LK G + + ++ L+A+ S++ + A + + I +P + F++LI K
Sbjct: 36 QAHARILKSGAQNDGYISAKLIAS--YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 109 EVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVFKVGFECDLFV 168
F +++ +++ MF G+ PD+ P LFK CA+L A K G QIH G + D FV
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 169 QNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSECLKLFGEMN---- 224
Q S+ +MY +C ++ A +F +M K V + SA++ A+A G E +++ EM
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 225 --NEKCWR----------------------------PEESILVSVLSACTHLGALDLGKC 254
N W P++ + SVL + L++G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 255 THGSLIRNISALNVIVETSLIDMYVKCG-------------CLEKGLC------------ 289
HG +I+ + V +++IDMY K G +E G+C
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 290 ------LFRMMADKCQ----LTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVVYVG 339
+F + ++ ++++ +I+G A +G+ EAL +F EM G++P+ V
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPS 393
Query: 340 VLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSMPIQ 399
+L AC + + G + ++ V ++D+ + G + + + MP
Sbjct: 394 MLPACGNIAALGHGRSTHG-FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP-T 451
Query: 400 QNDVVWRSLLSASKVH 415
+N V W SL++ +H
Sbjct: 452 KNLVCWNSLMNGFSMH 467
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 327/573 (57%), Gaps = 8/573 (1%)
Query: 37 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGA 96
I++ +++ ++VHAH++ G+ + + L+ + ++ Y +F + P
Sbjct: 15 IVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSAR--AIAYTHLLFLSVPLPDD 72
Query: 97 FDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGH 156
F FN++I+ K + Y M V P N+TF ++ K+CA L AL+ G +H H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 157 VFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGLWSEC 216
GF D +VQ +L+ Y KC +E A +F +M +KS+ +W+++++ NGL E
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEA 192
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+++F +M E + P+ + VS+LSAC GA+ LG H +I LNV + T+LI+
Sbjct: 193 IQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLRE-GLEPDDV 335
+Y +CG + K +F M + ++ MIS HG G++A+ +F++M + G P++V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 336 VYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQS 395
+V VLSAC+HAGLV EG + RM YR++P V+H+ C+VD++GRAG L EA + I
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 396 MPIQQN---DVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQRW 452
+ +W ++L A K+H N ++G AK L + +P +V+LSN+YA + +
Sbjct: 372 LDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKT 431
Query: 453 YDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKFE 512
+V+ IR M L + G+S++EV K Y F D SH IY + + + K
Sbjct: 432 DEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEI 491
Query: 513 GYSPDISQVLRDVDEDEKRERLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDCHTYT 572
GY+P +V+ V+E+EK L+ HS+KLA+AF L+ + I I +NLR+C DCH+
Sbjct: 492 GYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSAF 550
Query: 573 KLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
K IS++ R+I VRD+ RFH F++G+CSC DYW
Sbjct: 551 KYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 158/307 (51%), Gaps = 12/307 (3%)
Query: 36 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQID 92
+++K+C +L K VH H + GF + + + LV S G M+ A +F ++
Sbjct: 112 SVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTF--YSKCGDMEGARQVFDRMP 169
Query: 93 EPGAFDFNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQ 152
E +N+L+ GF + +EA+ ++ +M E G EPD+ TF +L ACA+ A+ G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 153 IHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNGL 212
+H ++ G + ++ + +LIN+Y +C V A +F +M + +VA+W+A+I+A+ ++G
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 213 WSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISAL-NVIVE 271
+ ++LF +M ++ P V+VLSAC H G ++ G+ + + ++ + V
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHH 349
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLT----YSVMISGLAMHGQGKEALSIFSEMLR 327
++DM + G L++ + + T ++ M+ MH + I ++
Sbjct: 350 VCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI- 408
Query: 328 EGLEPDD 334
LEPD+
Sbjct: 409 -ALEPDN 414
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 326/577 (56%), Gaps = 20/577 (3%)
Query: 37 ILKTCKNLE---EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDE 93
ILK+C +L +++H HV K G PF + L++ G + A +F + +
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM--YCKCGLVADARKVFEENPQ 116
Query: 94 PGAFD--FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGM 151
+N LI G+ + +A +++ M E GV D+ T L C + L G
Sbjct: 117 SSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGR 176
Query: 152 QIHGHVFKVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWSAIIAAHASNG 211
+HG K G + ++ V NS I MY KC VE +F +M K + +W+A+I+ ++ NG
Sbjct: 177 SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG 236
Query: 212 LWSECLKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVE 271
L + L+L+ +M + P+ LVSVLS+C HLGA +G + N NV V
Sbjct: 237 LAYDVLELYEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVS 295
Query: 272 TSLIDMYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLE 331
+ I MY +CG L K +F +M K ++++ MI MHG G+ L +F +M++ G+
Sbjct: 296 NASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIR 355
Query: 332 PDDVVYVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALE 391
PD V+V VLSACSH+GL ++GL F MK EY++ P +HY C+VDL+GRAG L EA+E
Sbjct: 356 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME 415
Query: 392 LIQSMPIQQNDVVWRSLLSASKVHHNLEIGEIAAKNLFQINSHHPSDYVLLSNMYARAQR 451
I+SMP++ + VW +LL A K+H N+++ E+A + + ++ YVL+SN+Y+ ++
Sbjct: 416 FIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKN 475
Query: 452 WYDVAKIRTEMASKGLNQSPGFSLVEVARKVYKFVSQDRSHPAWDNIYEMIHQMEWQLKF 511
+ +IR M + + PG+S VE +V+ F++ DRSH + ++ M+ ++E
Sbjct: 476 QEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE----- 530
Query: 512 EGYSPDISQVLRDVDEDEKRE---RLKGHSQKLAIAFALIHLSQGSPIRIARNLRMCNDC 568
+ ++ ++D D E + HS++LAIAF +++ G+ I + +NLR+C DC
Sbjct: 531 ----TSVMELAGNMDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDC 586
Query: 569 HTYTKLISVIYEREIIVRDRKRFHRFKDGTCSCRDYW 605
H + K +S I +R+ +VRD RFH FKDG CSC+DYW
Sbjct: 587 HVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 160/325 (49%), Gaps = 5/325 (1%)
Query: 99 FNTLIRGFVKEVEFEEALFLYNEMFERGVEPDNFTFPALFKACAKLQALKEGMQIHGHVF 158
+N +R + F E++ LY M G PD F+FP + K+CA L G Q+H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 159 KVGFECDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVAS--WSAIIAAHASNGLWSEC 216
K G E + FV +LI+MY KC V A +F++ Q S S ++A+I+ + +N ++
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 217 LKLFGEMNNEKCWRPEESILVSVLSACTHLGALDLGKCTHGSLIRNISALNVIVETSLID 276
+F M E + ++ ++ CT L LG+ HG ++ V V S I
Sbjct: 141 AYMFRRM-KETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFIT 199
Query: 277 MYVKCGCLEKGLCLFRMMADKCQLTYSVMISGLAMHGQGKEALSIFSEMLREGLEPDDVV 336
MY+KCG +E G LF M K +T++ +ISG + +G + L ++ +M G+ PD
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFT 259
Query: 337 YVGVLSACSHAGLVNEGLLCFDRMKLEYRIVPTVQHYGCVVDLMGRAGMLGEALELIQSM 396
V VLS+C+H G G ++ VP V + + R G L +A + M
Sbjct: 260 LVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIM 318
Query: 397 PIQQNDVVWRSLLSASKVHHNLEIG 421
P+ ++ V W +++ +H EIG
Sbjct: 319 PV-KSLVSWTAMIGCYGMHGMGEIG 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,864,771
Number of Sequences: 539616
Number of extensions: 8706104
Number of successful extensions: 34748
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 28011
Number of HSP's gapped (non-prelim): 2131
length of query: 605
length of database: 191,569,459
effective HSP length: 123
effective length of query: 482
effective length of database: 125,196,691
effective search space: 60344805062
effective search space used: 60344805062
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 64 (29.3 bits)