Query 007399
Match_columns 605
No_of_seqs 240 out of 1731
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 23:04:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007399.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007399hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02230 phosphoinositide phos 100.0 1E-164 2E-169 1354.3 51.1 584 3-605 7-598 (598)
2 PLN02222 phosphoinositide phos 100.0 2E-164 3E-169 1351.1 52.6 580 1-605 1-581 (581)
3 PLN02228 Phosphoinositide phos 100.0 1E-159 2E-164 1309.9 51.7 559 3-605 2-561 (567)
4 KOG0169 Phosphoinositide-speci 100.0 1E-160 3E-165 1316.5 39.9 558 1-605 182-744 (746)
5 PLN02952 phosphoinositide phos 100.0 3E-158 6E-163 1305.2 48.8 580 1-605 14-599 (599)
6 PLN02223 phosphoinositide phos 100.0 5E-151 1E-155 1224.2 46.1 523 10-605 1-537 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 1E-140 3E-145 1152.6 33.1 553 18-604 214-822 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 1E-130 3E-135 1064.1 31.6 536 38-604 236-1188(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 1E-108 3E-113 823.2 20.7 257 108-444 1-258 (258)
10 cd08633 PI-PLCc_eta2 Catalytic 100.0 2E-107 4E-112 812.2 20.8 252 108-444 1-254 (254)
11 cd08630 PI-PLCc_delta3 Catalyt 100.0 2E-107 4E-112 816.9 20.5 256 108-444 1-258 (258)
12 cd08595 PI-PLCc_zeta Catalytic 100.0 3E-107 7E-112 813.9 20.8 255 108-444 1-257 (257)
13 cd08624 PI-PLCc_beta2 Catalyti 100.0 6E-107 1E-111 813.6 21.7 254 108-444 1-261 (261)
14 cd08632 PI-PLCc_eta1 Catalytic 100.0 4E-107 8E-112 808.1 19.7 251 108-444 1-253 (253)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 5E-107 1E-111 813.0 20.6 256 108-444 1-258 (258)
16 cd08596 PI-PLCc_epsilon Cataly 100.0 1E-106 2E-111 808.8 19.5 249 108-444 1-254 (254)
17 cd08626 PI-PLCc_beta4 Catalyti 100.0 3E-106 6E-111 807.1 20.1 251 108-444 1-257 (257)
18 cd08623 PI-PLCc_beta1 Catalyti 100.0 9E-106 2E-110 804.0 20.3 251 108-444 1-258 (258)
19 cd08591 PI-PLCc_beta Catalytic 100.0 1E-105 2E-110 803.0 20.6 251 108-444 1-257 (257)
20 cd08593 PI-PLCc_delta Catalyti 100.0 1E-105 2E-110 806.1 20.3 256 108-444 1-257 (257)
21 cd08625 PI-PLCc_beta3 Catalyti 100.0 3E-105 7E-110 804.0 21.2 251 108-444 1-258 (258)
22 cd08594 PI-PLCc_eta Catalytic 100.0 1E-104 2E-109 781.7 19.7 225 108-444 1-227 (227)
23 cd08628 PI-PLCc_gamma2 Catalyt 100.0 9E-105 2E-109 796.1 18.5 253 108-444 1-254 (254)
24 cd08597 PI-PLCc_PRIP_metazoa C 100.0 8E-103 2E-107 786.6 20.1 259 108-444 1-260 (260)
25 cd08558 PI-PLCc_eukaryota Cata 100.0 6E-102 1E-106 765.0 20.2 225 108-444 1-226 (226)
26 cd08598 PI-PLC1c_yeast Catalyt 100.0 1E-101 3E-106 764.4 20.4 229 108-443 1-230 (231)
27 cd08627 PI-PLCc_gamma1 Catalyt 100.0 3E-101 6E-106 757.4 20.2 225 109-443 2-228 (229)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 3E-100 7E-105 752.8 19.9 227 108-444 1-229 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 2.3E-99 5E-104 748.2 20.3 226 108-444 1-228 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 2.7E-62 5.9E-67 504.0 18.1 251 108-444 1-274 (274)
31 smart00149 PLCYc Phospholipase 100.0 2.8E-44 6E-49 320.9 7.0 115 327-456 1-115 (115)
32 PF00387 PI-PLC-Y: Phosphatidy 100.0 1.1E-44 2.5E-49 325.7 2.7 118 325-457 1-118 (118)
33 smart00148 PLCXc Phospholipase 100.0 3.1E-40 6.8E-45 306.0 13.1 134 109-243 1-135 (135)
34 PF00388 PI-PLC-X: Phosphatidy 100.0 6.5E-37 1.4E-41 287.5 12.8 143 111-254 1-146 (146)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 8E-22 1.7E-26 205.0 12.9 146 109-254 3-209 (324)
36 cd00275 C2_PLC_like C2 domain 99.8 4.3E-19 9.3E-24 161.6 15.1 125 476-605 2-128 (128)
37 cd08590 PI-PLCc_Rv2075c_like C 99.8 2.5E-18 5.3E-23 176.7 12.6 143 108-252 3-168 (267)
38 cd08395 C2C_Munc13 C2 domain t 99.7 3.6E-17 7.8E-22 148.8 12.4 103 477-586 1-111 (120)
39 cd08682 C2_Rab11-FIP_classI C2 99.7 7E-16 1.5E-20 141.0 12.8 115 478-603 1-126 (126)
40 cd04036 C2_cPLA2 C2 domain pre 99.7 8.7E-16 1.9E-20 138.9 13.1 113 478-604 2-117 (119)
41 cd08677 C2A_Synaptotagmin-13 C 99.6 5.6E-16 1.2E-20 140.1 10.1 99 475-583 13-115 (118)
42 cd08557 PI-PLCc_bacteria_like 99.6 5.1E-16 1.1E-20 159.4 9.9 144 110-254 4-158 (271)
43 cd04042 C2A_MCTP_PRT C2 domain 99.6 3.3E-15 7.2E-20 135.4 13.9 116 477-604 1-119 (121)
44 cd08381 C2B_PI3K_class_II C2 d 99.6 1.9E-15 4E-20 137.9 12.1 97 476-579 13-112 (122)
45 cd08406 C2B_Synaptotagmin-12 C 99.6 5.7E-16 1.2E-20 144.0 8.4 113 475-593 14-129 (136)
46 cd04016 C2_Tollip C2 domain pr 99.6 6.9E-15 1.5E-19 134.1 13.8 115 476-604 2-121 (121)
47 cd04022 C2A_MCTP_PRT_plant C2 99.6 5.3E-15 1.1E-19 135.4 12.7 117 477-604 1-125 (127)
48 cd08377 C2C_MCTP_PRT C2 domain 99.6 1E-14 2.2E-19 131.3 14.3 117 477-605 2-119 (119)
49 cd04019 C2C_MCTP_PRT_plant C2 99.6 6.8E-15 1.5E-19 139.1 13.4 116 478-604 2-131 (150)
50 cd08379 C2D_MCTP_PRT_plant C2 99.6 6.7E-15 1.5E-19 135.1 12.8 114 477-599 1-124 (126)
51 cd04015 C2_plant_PLD C2 domain 99.6 1.3E-14 2.7E-19 138.4 14.3 125 475-605 6-158 (158)
52 cd04029 C2A_SLP-4_5 C2 domain 99.6 5.8E-15 1.3E-19 135.2 11.5 107 475-586 14-125 (125)
53 cd08393 C2A_SLP-1_2 C2 domain 99.6 9E-15 1.9E-19 133.8 11.5 104 476-585 15-124 (125)
54 cd08692 C2B_Tac2-N C2 domain s 99.6 4.8E-15 1E-19 137.1 9.5 114 473-592 11-128 (135)
55 cd04010 C2B_RasA3 C2 domain se 99.6 1.1E-14 2.4E-19 137.3 12.2 108 477-592 1-127 (148)
56 cd04033 C2_NEDD4_NEDD4L C2 dom 99.6 1.9E-14 4.1E-19 132.4 13.4 122 477-605 1-133 (133)
57 cd08392 C2A_SLP-3 C2 domain fi 99.6 1.2E-14 2.5E-19 133.8 11.7 104 476-585 15-127 (128)
58 cd08407 C2B_Synaptotagmin-13 C 99.6 3.8E-15 8.3E-20 138.8 7.9 115 475-593 14-131 (138)
59 cd04028 C2B_RIM1alpha C2 domai 99.6 2.4E-14 5.2E-19 134.6 13.2 108 476-589 29-140 (146)
60 cd04041 C2A_fungal C2 domain f 99.6 1.2E-14 2.6E-19 130.1 9.4 102 477-586 2-107 (111)
61 cd08681 C2_fungal_Inn1p-like C 99.6 3.2E-14 7E-19 128.1 12.3 113 477-604 2-118 (118)
62 cd08376 C2B_MCTP_PRT C2 domain 99.6 5.3E-14 1.2E-18 126.3 13.6 110 478-604 2-114 (116)
63 cd08378 C2B_MCTP_PRT_plant C2 99.6 5E-14 1.1E-18 128.2 13.0 110 478-604 2-119 (121)
64 cd04039 C2_PSD C2 domain prese 99.5 2.5E-14 5.4E-19 127.8 10.4 97 477-580 2-99 (108)
65 cd08404 C2B_Synaptotagmin-4 C2 99.5 1E-14 2.3E-19 135.0 8.2 113 475-593 14-129 (136)
66 cd04031 C2A_RIM1alpha C2 domai 99.5 6.1E-14 1.3E-18 127.3 12.3 105 475-585 15-124 (125)
67 cd08400 C2_Ras_p21A1 C2 domain 99.5 1.1E-13 2.4E-18 126.8 14.0 115 476-604 4-122 (126)
68 cd08680 C2_Kibra C2 domain fou 99.5 3.8E-14 8.2E-19 129.8 10.6 97 475-577 13-112 (124)
69 cd08402 C2B_Synaptotagmin-1 C2 99.5 1.9E-14 4.2E-19 133.2 8.1 113 475-593 14-129 (136)
70 cd08678 C2_C21orf25-like C2 do 99.5 9.7E-14 2.1E-18 126.9 12.5 116 478-605 1-120 (126)
71 cd08375 C2_Intersectin C2 doma 99.5 1.1E-13 2.4E-18 128.7 13.0 113 476-604 15-135 (136)
72 cd04050 C2B_Synaptotagmin-like 99.5 6.7E-14 1.5E-18 123.9 11.0 96 478-587 2-102 (105)
73 cd08385 C2A_Synaptotagmin-1-5- 99.5 8.3E-14 1.8E-18 126.6 11.7 103 475-585 15-122 (124)
74 cd04040 C2D_Tricalbin-like C2 99.5 1.2E-13 2.6E-18 123.7 12.1 111 478-600 1-114 (115)
75 cd08373 C2A_Ferlin C2 domain f 99.5 1.6E-13 3.5E-18 125.4 13.0 109 482-604 2-115 (127)
76 cd04025 C2B_RasA1_RasA4 C2 dom 99.5 1.6E-13 3.5E-18 124.7 12.9 114 478-602 2-122 (123)
77 cd04030 C2C_KIAA1228 C2 domain 99.5 1.4E-13 3E-18 125.5 12.1 105 475-585 15-126 (127)
78 cd08384 C2B_Rabphilin_Doc2 C2 99.5 4E-14 8.7E-19 130.4 8.5 113 475-593 12-127 (133)
79 KOG1030 Predicted Ca2+-depende 99.5 5.3E-14 1.2E-18 132.6 9.4 92 476-579 6-97 (168)
80 cd08685 C2_RGS-like C2 domain 99.5 8.2E-14 1.8E-18 126.6 10.0 97 476-579 12-110 (119)
81 cd08688 C2_KIAA0528-like C2 do 99.5 7.8E-14 1.7E-18 124.6 9.7 99 478-587 1-109 (110)
82 cd08382 C2_Smurf-like C2 domai 99.5 2.1E-13 4.4E-18 124.4 12.5 113 478-602 2-122 (123)
83 cd08387 C2A_Synaptotagmin-8 C2 99.5 1.8E-13 3.9E-18 124.5 11.6 103 476-586 16-123 (124)
84 cd04018 C2C_Ferlin C2 domain t 99.5 1.2E-13 2.7E-18 130.6 10.7 107 477-588 1-126 (151)
85 cd08403 C2B_Synaptotagmin-3-5- 99.5 5.5E-14 1.2E-18 129.8 8.1 113 475-593 13-128 (134)
86 cd08521 C2A_SLP C2 domain firs 99.5 2E-13 4.4E-18 123.5 11.7 105 475-585 13-123 (123)
87 cd08410 C2B_Synaptotagmin-17 C 99.5 5.9E-14 1.3E-18 130.1 8.1 112 476-593 14-129 (135)
88 cd04024 C2A_Synaptotagmin-like 99.5 4E-13 8.8E-18 122.3 13.3 117 477-604 2-128 (128)
89 cd08388 C2A_Synaptotagmin-4-11 99.5 2.6E-13 5.7E-18 124.7 11.6 94 476-577 16-113 (128)
90 cd04043 C2_Munc13_fungal C2 do 99.5 6E-13 1.3E-17 121.2 13.8 113 477-604 2-120 (126)
91 cd08405 C2B_Synaptotagmin-7 C2 99.5 7.3E-14 1.6E-18 129.3 7.9 113 475-593 14-129 (136)
92 cd04011 C2B_Ferlin C2 domain s 99.5 2.5E-13 5.3E-18 121.4 10.8 98 476-588 4-111 (111)
93 cd08391 C2A_C2C_Synaptotagmin_ 99.5 5.3E-13 1.2E-17 120.2 13.0 115 477-604 2-121 (121)
94 cd04032 C2_Perforin C2 domain 99.5 3.1E-13 6.7E-18 124.2 11.4 93 475-579 27-120 (127)
95 cd04051 C2_SRC2_like C2 domain 99.5 2.7E-13 5.9E-18 123.4 10.4 108 477-594 1-121 (125)
96 cd04027 C2B_Munc13 C2 domain s 99.5 8.3E-13 1.8E-17 121.0 13.3 114 477-602 2-127 (127)
97 cd08401 C2A_RasA2_RasA3 C2 dom 99.5 8.3E-13 1.8E-17 120.2 13.2 117 478-604 2-121 (121)
98 cd04009 C2B_Munc13-like C2 dom 99.5 3.8E-13 8.1E-18 124.3 10.9 96 476-577 16-117 (133)
99 PF09279 EF-hand_like: Phospho 99.5 6.8E-14 1.5E-18 118.8 5.3 81 26-108 1-83 (83)
100 cd08389 C2A_Synaptotagmin-14_1 99.5 4.6E-13 1E-17 122.4 11.2 101 476-585 16-122 (124)
101 cd04054 C2A_Rasal1_RasA4 C2 do 99.5 8E-13 1.7E-17 120.1 12.6 115 478-603 2-120 (121)
102 cd04017 C2D_Ferlin C2 domain f 99.4 1E-12 2.2E-17 121.8 13.2 115 477-605 2-132 (135)
103 cd08386 C2A_Synaptotagmin-7 C2 99.4 7.7E-13 1.7E-17 120.3 11.8 103 475-585 15-123 (125)
104 cd04046 C2_Calpain C2 domain p 99.4 2.6E-12 5.7E-17 117.6 15.1 114 476-604 3-121 (126)
105 cd00276 C2B_Synaptotagmin C2 d 99.4 2.3E-13 4.9E-18 124.8 8.0 112 476-593 14-128 (134)
106 cd04014 C2_PKC_epsilon C2 doma 99.4 1.5E-12 3.2E-17 120.0 13.2 112 476-604 4-128 (132)
107 cd08390 C2A_Synaptotagmin-15-1 99.4 8.1E-13 1.8E-17 119.7 11.2 104 475-586 13-122 (123)
108 cd04048 C2A_Copine C2 domain f 99.4 7.1E-13 1.5E-17 120.1 10.3 103 482-590 6-117 (120)
109 cd08409 C2B_Synaptotagmin-15 C 99.4 5.9E-13 1.3E-17 123.8 9.8 98 475-579 14-113 (137)
110 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.4 9.8E-13 2.1E-17 125.9 11.5 97 475-577 26-125 (162)
111 cd04026 C2_PKC_alpha_gamma C2 99.4 1.1E-12 2.4E-17 120.4 11.3 108 476-589 13-123 (131)
112 cd04044 C2A_Tricalbin-like C2 99.4 1.9E-12 4.1E-17 117.1 12.5 119 476-605 2-123 (124)
113 cd08690 C2_Freud-1 C2 domain f 99.4 4.1E-12 8.9E-17 120.5 15.0 121 478-604 4-136 (155)
114 cd08408 C2B_Synaptotagmin-14_1 99.4 9.2E-13 2E-17 122.8 10.1 113 475-593 14-131 (138)
115 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.6E-12 3.5E-17 118.1 10.6 99 475-580 14-115 (123)
116 cd04037 C2E_Ferlin C2 domain f 99.4 2.2E-12 4.8E-17 117.8 10.5 91 478-577 2-92 (124)
117 cd08691 C2_NEDL1-like C2 domai 99.4 8.4E-12 1.8E-16 116.3 13.3 116 478-602 3-136 (137)
118 cd04038 C2_ArfGAP C2 domain pr 99.4 3E-12 6.6E-17 120.4 10.3 91 476-579 2-92 (145)
119 cd08675 C2B_RasGAP C2 domain s 99.4 5E-12 1.1E-16 117.7 11.2 104 478-589 1-122 (137)
120 cd08686 C2_ABR C2 domain in th 99.3 5.8E-12 1.2E-16 113.8 9.9 92 478-582 1-102 (118)
121 cd04045 C2C_Tricalbin-like C2 99.3 9E-12 1.9E-16 113.3 10.8 92 477-579 2-93 (120)
122 cd04049 C2_putative_Elicitor-r 99.3 9.4E-12 2E-16 113.2 10.4 91 477-578 2-96 (124)
123 PLN03008 Phospholipase D delta 99.3 1.7E-11 3.7E-16 140.1 13.5 99 501-605 75-177 (868)
124 cd08394 C2A_Munc13 C2 domain f 99.3 1.5E-11 3.3E-16 112.5 10.5 93 477-586 3-100 (127)
125 cd04013 C2_SynGAP_like C2 doma 99.3 3.1E-11 6.6E-16 113.5 12.7 115 475-605 10-139 (146)
126 cd08676 C2A_Munc13-like C2 dom 99.3 1.9E-11 4.1E-16 115.9 11.0 102 474-585 26-153 (153)
127 cd04021 C2_E3_ubiquitin_ligase 99.3 3.1E-11 6.6E-16 110.5 11.7 115 476-603 2-125 (125)
128 PF00168 C2: C2 domain; Inter 99.3 1.6E-11 3.6E-16 102.3 8.7 85 478-570 1-85 (85)
129 cd08383 C2A_RasGAP C2 domain ( 99.3 6.4E-11 1.4E-15 106.1 13.0 113 478-604 2-117 (117)
130 KOG0696 Serine/threonine prote 99.3 4.6E-12 1E-16 133.3 5.7 96 476-577 180-276 (683)
131 cd04052 C2B_Tricalbin-like C2 99.2 4.8E-11 1E-15 106.8 10.5 97 498-604 8-108 (111)
132 cd08555 PI-PLCc_GDPD_SF Cataly 99.2 4.7E-11 1E-15 115.9 10.9 98 122-224 2-109 (179)
133 cd04047 C2B_Copine C2 domain s 99.2 8E-11 1.7E-15 104.7 10.0 93 480-579 4-101 (110)
134 KOG1028 Ca2+-dependent phospho 99.2 1.7E-10 3.6E-15 126.2 12.4 121 476-604 167-293 (421)
135 smart00239 C2 Protein kinase C 99.1 4.4E-10 9.5E-15 95.6 10.4 99 478-584 2-100 (101)
136 PLN03200 cellulose synthase-in 99.0 8.8E-10 1.9E-14 136.6 11.6 114 475-604 1979-2099(2102)
137 cd08374 C2F_Ferlin C2 domain s 99.0 2.6E-09 5.6E-14 98.9 10.4 97 478-580 2-125 (133)
138 KOG1011 Neurotransmitter relea 98.9 1.8E-09 3.8E-14 118.1 8.1 116 476-603 295-422 (1283)
139 cd00030 C2 C2 domain. The C2 d 98.9 1E-08 2.2E-13 86.4 9.9 90 478-577 1-90 (102)
140 PLN02270 phospholipase D alpha 98.9 1.1E-08 2.4E-13 117.3 12.3 125 475-605 7-148 (808)
141 cd08586 PI-PLCc_BcPLC_like Cat 98.9 6.8E-09 1.5E-13 107.9 9.4 137 112-253 7-148 (279)
142 KOG1028 Ca2+-dependent phospho 98.8 9.3E-09 2E-13 112.6 9.8 150 438-593 242-412 (421)
143 cd08588 PI-PLCc_At5g67130_like 98.8 1.4E-08 3E-13 105.0 10.2 137 111-250 8-152 (270)
144 COG5038 Ca2+-dependent lipid-b 98.7 3.5E-08 7.5E-13 115.2 10.4 105 475-589 1039-1146(1227)
145 KOG1328 Synaptic vesicle prote 98.4 1.2E-07 2.6E-12 105.5 2.5 95 476-576 947-1047(1103)
146 PLN02352 phospholipase D epsil 98.3 2.9E-06 6.2E-11 97.6 11.8 117 475-605 9-130 (758)
147 cd08689 C2_fungal_Pkc1p C2 dom 98.0 2E-05 4.4E-10 69.7 6.9 87 478-577 1-87 (109)
148 COG5038 Ca2+-dependent lipid-b 98.0 1.8E-05 3.9E-10 93.1 8.6 93 476-577 436-528 (1227)
149 KOG1011 Neurotransmitter relea 97.9 2.7E-05 5.8E-10 86.1 9.0 104 476-586 1125-1236(1283)
150 KOG2059 Ras GTPase-activating 97.8 6.8E-05 1.5E-09 84.2 9.4 108 476-595 5-117 (800)
151 KOG1031 Predicted Ca2+-depende 97.8 8.1E-05 1.8E-09 81.6 8.9 120 476-605 3-138 (1169)
152 KOG0905 Phosphoinositide 3-kin 97.6 4.2E-05 9E-10 89.6 4.6 97 475-577 1523-1622(1639)
153 cd08622 PI-PLCXDc_CG14945_like 97.6 0.00043 9.4E-09 72.1 11.6 135 112-251 6-158 (276)
154 cd08587 PI-PLCXDc_like Catalyt 97.5 0.00079 1.7E-08 70.4 11.9 135 112-250 6-169 (288)
155 KOG1013 Synaptic vesicle prote 97.5 0.00021 4.5E-09 74.4 6.2 105 476-592 233-339 (362)
156 KOG2059 Ras GTPase-activating 97.1 0.00071 1.5E-08 76.3 6.4 76 501-577 149-240 (800)
157 cd08683 C2_C2cd3 C2 domain fou 97.0 0.0017 3.8E-08 59.5 6.5 77 503-580 33-137 (143)
158 cd08398 C2_PI3K_class_I_alpha 97.0 0.011 2.3E-07 56.6 12.1 101 476-586 8-120 (158)
159 cd08693 C2_PI3K_class_I_beta_d 96.9 0.011 2.3E-07 57.5 12.0 103 476-586 8-134 (173)
160 cd04012 C2A_PI3K_class_II C2 d 96.9 0.0075 1.6E-07 58.4 10.4 115 475-595 7-143 (171)
161 cd08380 C2_PI3K_like C2 domain 96.9 0.012 2.6E-07 55.9 11.6 103 477-586 9-121 (156)
162 cd08616 PI-PLCXD1c Catalytic d 96.9 0.011 2.4E-07 62.1 12.3 135 112-252 7-174 (290)
163 KOG1013 Synaptic vesicle prote 96.8 0.00031 6.6E-09 73.2 0.1 98 476-579 93-193 (362)
164 KOG1326 Membrane-associated pr 96.6 0.0016 3.5E-08 76.0 3.8 94 473-575 610-703 (1105)
165 cd08556 GDPD Glycerophosphodie 96.6 0.0098 2.1E-07 57.2 8.8 64 132-209 9-72 (189)
166 cd08582 GDPD_like_2 Glyceropho 96.5 0.0093 2E-07 60.2 8.6 40 134-174 11-50 (233)
167 cd08562 GDPD_EcUgpQ_like Glyce 96.5 0.0075 1.6E-07 60.4 7.7 40 134-174 11-50 (229)
168 cd08397 C2_PI3K_class_III C2 d 96.5 0.013 2.8E-07 56.2 8.6 85 502-586 29-121 (159)
169 PLN02964 phosphatidylserine de 96.5 0.0063 1.4E-07 70.0 7.5 86 474-576 52-137 (644)
170 KOG1328 Synaptic vesicle prote 96.4 0.0018 3.8E-08 73.2 2.3 81 522-602 180-298 (1103)
171 PF03009 GDPD: Glycerophosphor 96.2 0.0067 1.5E-07 60.7 5.3 41 134-175 8-48 (256)
172 cd08579 GDPD_memb_like Glycero 96.2 0.013 2.7E-07 58.7 7.2 40 134-174 11-50 (220)
173 cd08399 C2_PI3K_class_I_gamma 96.0 0.043 9.4E-07 53.5 9.8 102 477-585 11-135 (178)
174 cd08563 GDPD_TtGDE_like Glycer 95.9 0.022 4.7E-07 57.3 7.6 40 134-174 13-52 (230)
175 cd08567 GDPD_SpGDE_like Glycer 95.9 0.029 6.3E-07 57.3 8.4 40 135-175 14-53 (263)
176 cd08684 C2A_Tac2-N C2 domain f 95.9 0.015 3.2E-07 50.0 5.0 59 518-578 34-94 (103)
177 cd08577 PI-PLCc_GDPD_SF_unchar 95.7 0.035 7.6E-07 56.3 8.0 97 122-229 4-109 (228)
178 cd08620 PI-PLCXDc_like_1 Catal 95.6 0.1 2.2E-06 54.6 11.2 139 112-253 6-162 (281)
179 PF00792 PI3K_C2: Phosphoinosi 95.6 0.039 8.6E-07 51.5 7.4 82 505-586 4-99 (142)
180 cd08619 PI-PLCXDc_plant Cataly 95.5 0.074 1.6E-06 55.4 9.6 137 109-254 23-166 (285)
181 cd08565 GDPD_pAtGDE_like Glyce 95.3 0.089 1.9E-06 53.4 9.3 39 135-174 12-50 (235)
182 cd08566 GDPD_AtGDE_like Glycer 95.2 0.074 1.6E-06 54.1 8.3 39 135-174 14-52 (240)
183 cd08573 GDPD_GDE1 Glycerophosp 94.9 0.11 2.3E-06 53.7 8.7 40 134-174 11-50 (258)
184 cd08564 GDPD_GsGDE_like Glycer 94.8 0.1 2.2E-06 53.8 8.4 39 134-173 18-56 (265)
185 cd08568 GDPD_TmGDE_like Glycer 94.8 0.12 2.5E-06 52.0 8.5 78 133-220 11-113 (226)
186 cd05029 S-100A6 S-100A6: S-100 94.5 0.16 3.5E-06 43.7 7.4 63 26-95 11-79 (88)
187 cd08584 PI-PLCc_GDPD_SF_unchar 94.0 0.23 5E-06 49.0 8.2 48 137-188 7-54 (192)
188 cd08575 GDPD_GDE4_like Glycero 93.9 0.063 1.4E-06 55.5 4.4 41 135-176 14-54 (264)
189 cd08561 GDPD_cytoplasmic_ScUgp 93.6 0.072 1.6E-06 54.3 4.2 41 134-175 11-51 (249)
190 cd08574 GDPD_GDE_2_3_6 Glycero 93.0 0.11 2.3E-06 53.5 4.2 41 134-175 14-54 (252)
191 cd08601 GDPD_SaGlpQ_like Glyce 92.7 0.13 2.8E-06 52.7 4.4 41 134-175 13-53 (256)
192 KOG1327 Copine [Signal transdu 92.7 0.23 4.9E-06 55.7 6.6 83 521-603 43-130 (529)
193 cd08580 GDPD_Rv2277c_like Glyc 92.3 0.19 4.1E-06 52.1 5.0 42 133-175 12-53 (263)
194 cd08581 GDPD_like_1 Glyceropho 92.2 0.16 3.4E-06 51.4 4.2 40 135-175 12-51 (229)
195 cd08612 GDPD_GDE4 Glycerophosp 92.2 0.17 3.7E-06 53.3 4.6 40 135-175 40-79 (300)
196 cd08600 GDPD_EcGlpQ_like Glyce 92.0 0.18 3.8E-06 53.7 4.6 43 132-175 11-53 (318)
197 PRK11143 glpQ glycerophosphodi 92.0 0.2 4.3E-06 54.2 4.9 42 133-175 38-79 (355)
198 cd08607 GDPD_GDE5 Glycerophosp 91.7 0.22 4.7E-06 52.0 4.7 49 127-176 12-60 (290)
199 KOG2060 Rab3 effector RIM1 and 91.6 0.14 3E-06 54.7 3.0 106 475-586 268-378 (405)
200 cd08571 GDPD_SHV3_plant Glycer 91.3 0.21 4.5E-06 52.8 4.1 42 134-176 13-54 (302)
201 cd08605 GDPD_GDE5_like_1_plant 91.2 0.22 4.8E-06 51.8 4.2 38 136-174 25-62 (282)
202 cd08559 GDPD_periplasmic_GlpQ_ 91.2 0.21 4.5E-06 52.5 4.0 41 134-175 13-53 (296)
203 cd08609 GDPD_GDE3 Glycerophosp 90.9 0.25 5.5E-06 52.5 4.3 49 123-175 31-79 (315)
204 cd08606 GDPD_YPL110cp_fungi Gl 90.7 0.24 5.3E-06 51.5 3.9 39 136-175 24-62 (286)
205 cd08570 GDPD_YPL206cp_fungi Gl 90.5 0.38 8.1E-06 48.6 4.9 41 134-175 11-51 (234)
206 KOG3837 Uncharacterized conser 90.3 0.38 8.1E-06 52.1 4.8 121 476-604 367-502 (523)
207 PRK09454 ugpQ cytoplasmic glyc 90.1 0.29 6.3E-06 50.0 3.8 41 134-175 20-60 (249)
208 cd08602 GDPD_ScGlpQ1_like Glyc 90.1 0.32 6.9E-06 51.6 4.2 43 133-176 12-54 (309)
209 cd08695 C2_Dock-B C2 domains f 89.9 1.2 2.5E-05 44.0 7.6 41 518-558 52-94 (189)
210 cd05030 calgranulins Calgranul 89.9 0.85 1.8E-05 39.1 6.0 63 26-95 9-79 (88)
211 cd05024 S-100A10 S-100A10: A s 89.7 1.7 3.6E-05 37.9 7.5 64 26-95 9-76 (91)
212 smart00142 PI3K_C2 Phosphoinos 89.7 1.8 3.8E-05 38.1 7.9 75 478-558 13-91 (100)
213 cd05023 S-100A11 S-100A11: S-1 89.3 1.3 2.8E-05 38.2 6.6 64 26-95 10-80 (89)
214 PTZ00268 glycosylphosphatidyli 89.2 4.5 9.6E-05 44.1 12.0 107 142-255 90-207 (380)
215 cd08583 PI-PLCc_GDPD_SF_unchar 89.1 0.53 1.1E-05 47.6 4.8 40 135-175 14-53 (237)
216 cd05022 S-100A13 S-100A13: S-1 88.8 1.3 2.9E-05 38.2 6.4 63 26-95 9-75 (89)
217 cd08604 GDPD_SHV3_repeat_2 Gly 88.6 0.52 1.1E-05 49.8 4.4 42 133-175 12-53 (300)
218 KOG1326 Membrane-associated pr 88.2 0.31 6.8E-06 57.7 2.7 99 478-587 208-317 (1105)
219 cd05026 S-100Z S-100Z: S-100Z 88.2 2.1 4.6E-05 37.0 7.3 64 26-95 11-81 (93)
220 PF14429 DOCK-C2: C2 domain in 88.0 1.9 4.2E-05 42.0 7.7 67 520-586 60-135 (184)
221 PF13833 EF-hand_8: EF-hand do 87.9 0.94 2E-05 34.6 4.4 50 38-94 3-52 (54)
222 cd08572 GDPD_GDE5_like Glycero 87.6 0.65 1.4E-05 48.8 4.5 43 133-176 19-61 (293)
223 cd08694 C2_Dock-A C2 domains f 87.4 3.7 8.1E-05 40.7 9.2 68 519-586 53-131 (196)
224 cd08610 GDPD_GDE6 Glycerophosp 87.3 0.69 1.5E-05 49.3 4.4 43 133-176 34-76 (316)
225 KOG1327 Copine [Signal transdu 86.3 1.2 2.5E-05 50.2 5.7 82 497-578 151-236 (529)
226 cd08679 C2_DOCK180_related C2 85.0 2.2 4.9E-05 41.4 6.4 66 523-588 56-133 (178)
227 cd05025 S-100A1 S-100A1: S-100 84.6 2.9 6.3E-05 35.8 6.2 65 25-95 9-80 (92)
228 PF10358 NT-C2: N-terminal C2 84.4 23 0.0005 32.5 12.7 114 476-604 7-134 (143)
229 COG0584 UgpQ Glycerophosphoryl 83.7 1.2 2.6E-05 45.3 4.1 38 135-173 19-56 (257)
230 cd08585 GDPD_like_3 Glyceropho 83.4 1.1 2.4E-05 45.6 3.6 39 135-175 20-58 (237)
231 cd08560 GDPD_EcGlpQ_like_1 Gly 83.4 1.2 2.7E-05 48.1 4.2 40 134-174 29-69 (356)
232 cd00051 EFh EF-hand, calcium b 83.3 5.1 0.00011 29.7 6.6 59 27-93 2-62 (63)
233 cd08613 GDPD_GDE4_like_1 Glyce 83.1 1.2 2.7E-05 47.1 3.9 39 136-175 60-98 (309)
234 PF15627 CEP76-C2: CEP76 C2 do 82.9 15 0.00033 35.1 10.8 126 473-605 6-150 (156)
235 KOG2258 Glycerophosphoryl dies 82.5 1.7 3.7E-05 46.8 4.8 40 135-175 82-121 (341)
236 smart00027 EH Eps15 homology d 82.4 5.5 0.00012 34.3 7.1 62 24-95 9-72 (96)
237 cd08608 GDPD_GDE2 Glycerophosp 82.4 1.5 3.2E-05 47.4 4.3 41 134-175 14-54 (351)
238 cd08578 GDPD_NUC-2_fungi Putat 81.7 1.8 4E-05 45.7 4.6 39 137-176 16-54 (300)
239 PTZ00183 centrin; Provisional 81.2 6.3 0.00014 36.3 7.6 65 23-95 88-154 (158)
240 PTZ00184 calmodulin; Provision 79.6 7.2 0.00016 35.3 7.3 65 23-95 82-148 (149)
241 PF01023 S_100: S-100/ICaBP ty 79.1 2.4 5.1E-05 31.8 3.1 27 26-52 7-37 (44)
242 PF13499 EF-hand_7: EF-hand do 78.0 6.3 0.00014 31.0 5.6 63 27-93 2-66 (66)
243 cd05027 S-100B S-100B: S-100B 77.0 11 0.00025 32.2 7.2 64 26-95 9-79 (88)
244 PF05386 TEP1_N: TEP1 N-termin 76.8 0.58 1.3E-05 31.7 -0.6 14 194-207 8-21 (30)
245 cd00052 EH Eps15 homology doma 76.5 12 0.00026 29.2 6.8 57 28-94 2-60 (67)
246 PF09069 EF-hand_3: EF-hand; 73.7 6.7 0.00015 34.1 4.9 62 27-96 5-76 (90)
247 cd08603 GDPD_SHV3_repeat_1 Gly 72.9 4 8.6E-05 43.2 4.0 40 135-175 14-55 (299)
248 cd00213 S-100 S-100: S-100 dom 72.1 18 0.00038 30.4 7.2 66 24-95 7-79 (88)
249 cd05031 S-100A10_like S-100A10 70.7 16 0.00034 31.4 6.7 65 25-95 8-79 (94)
250 cd08621 PI-PLCXDc_like_2 Catal 67.7 15 0.00032 38.9 7.0 92 112-204 6-113 (300)
251 PF05517 p25-alpha: p25-alpha 66.3 11 0.00024 35.8 5.2 63 27-95 1-69 (154)
252 PF12416 DUF3668: Cep120 prote 64.4 63 0.0014 34.9 11.0 99 478-590 2-116 (340)
253 cd08697 C2_Dock-D C2 domains f 63.0 27 0.00059 34.4 7.3 68 519-586 56-138 (185)
254 KOG0904 Phosphatidylinositol 3 62.2 35 0.00076 40.8 9.0 99 476-583 343-467 (1076)
255 KOG4306 Glycosylphosphatidylin 59.0 39 0.00084 35.8 8.0 82 143-229 73-161 (306)
256 KOG1329 Phospholipase D1 [Lipi 58.4 11 0.00024 44.9 4.3 97 503-604 138-239 (887)
257 cd08696 C2_Dock-C C2 domains f 57.7 30 0.00065 33.9 6.6 55 520-574 55-117 (179)
258 PTZ00183 centrin; Provisional 57.7 45 0.00097 30.5 7.6 63 25-95 17-81 (158)
259 KOG0906 Phosphatidylinositol 3 56.5 11 0.00023 43.6 3.5 54 533-586 78-138 (843)
260 PRK07259 dihydroorotate dehydr 54.8 35 0.00076 35.7 7.1 79 130-221 95-180 (301)
261 PF00036 EF-hand_1: EF hand; 50.6 18 0.00039 24.5 2.6 26 26-51 1-28 (29)
262 PTZ00184 calmodulin; Provision 48.6 73 0.0016 28.6 7.4 63 25-95 11-75 (149)
263 PF13405 EF-hand_6: EF-hand do 46.9 20 0.00043 24.1 2.5 26 26-51 1-28 (31)
264 cd02810 DHOD_DHPD_FMN Dihydroo 43.4 95 0.0021 32.1 8.1 90 129-229 101-195 (289)
265 smart00054 EFh EF-hand, calciu 40.8 35 0.00076 20.6 2.9 26 26-51 1-28 (29)
266 PF11618 DUF3250: Protein of u 40.2 84 0.0018 28.1 6.1 79 521-603 13-103 (107)
267 KOG0027 Calmodulin and related 39.2 1.1E+02 0.0024 28.4 7.2 64 24-95 84-149 (151)
268 PF14186 Aida_C2: Cytoskeletal 39.0 1.4E+02 0.0031 28.3 7.6 121 475-604 12-147 (147)
269 PRK09071 hypothetical protein; 38.7 23 0.00049 38.0 2.6 56 133-188 52-132 (323)
270 PF14788 EF-hand_10: EF hand; 37.4 63 0.0014 25.2 4.1 46 40-93 2-47 (51)
271 COG5126 FRQ1 Ca2+-binding prot 36.0 1.3E+02 0.0029 28.9 7.1 61 26-95 21-83 (160)
272 PRK08136 glycosyl transferase 34.9 34 0.00073 36.6 3.2 24 165-188 110-134 (317)
273 COG5126 FRQ1 Ca2+-binding prot 34.5 1.1E+02 0.0024 29.4 6.3 66 22-95 89-156 (160)
274 PF11422 IBP39: Initiator bind 34.4 1.6E+02 0.0036 28.7 7.3 97 24-127 18-138 (181)
275 PTZ00466 actin-like protein; P 32.7 56 0.0012 35.6 4.5 48 178-225 83-135 (380)
276 PTZ00452 actin; Provisional 32.4 57 0.0012 35.5 4.5 49 177-225 75-129 (375)
277 PLN02591 tryptophan synthase 32.2 33 0.00072 35.4 2.5 93 135-230 11-113 (250)
278 KOG0027 Calmodulin and related 31.8 1.7E+02 0.0037 27.2 7.1 64 25-96 8-73 (151)
279 PTZ00281 actin; Provisional 31.0 56 0.0012 35.5 4.1 50 177-226 76-131 (376)
280 PF08726 EFhand_Ca_insen: Ca2+ 31.0 31 0.00067 28.5 1.6 33 21-53 2-35 (69)
281 PF00022 Actin: Actin; InterP 29.8 66 0.0014 34.7 4.5 47 179-225 71-123 (393)
282 KOG1452 Predicted Rho GTPase-a 28.8 2E+02 0.0043 30.8 7.4 77 475-561 50-126 (442)
283 cd00252 SPARC_EC SPARC_EC; ext 28.6 2.3E+02 0.005 25.7 7.0 61 23-95 46-108 (116)
284 PF00977 His_biosynth: Histidi 28.5 94 0.002 31.3 5.0 40 150-193 123-162 (229)
285 PF15625 CC2D2AN-C2: CC2D2A N- 28.0 1.7E+02 0.0036 28.2 6.4 67 504-577 38-107 (168)
286 PF12738 PTCB-BRCT: twin BRCT 27.3 44 0.00096 26.1 1.9 29 122-154 32-60 (63)
287 PRK05395 3-dehydroquinate dehy 26.9 64 0.0014 30.6 3.2 65 133-208 22-102 (146)
288 smart00268 ACTIN Actin. ACTIN 26.3 73 0.0016 34.2 4.0 46 180-225 73-124 (373)
289 cd08687 C2_PKN-like C2 domain 25.5 2.1E+02 0.0045 25.2 5.8 47 530-581 31-77 (98)
290 PTZ00004 actin-2; Provisional 25.1 93 0.002 33.8 4.6 46 181-226 80-131 (378)
291 COG1590 Uncharacterized conser 24.9 25 0.00055 35.1 0.1 54 136-200 44-101 (208)
292 cd04740 DHOD_1B_like Dihydroor 22.4 2.5E+02 0.0054 29.2 7.1 78 131-221 94-177 (296)
293 cd08576 GDPD_like_SMaseD_PLD G 22.4 1.8E+02 0.0038 30.4 5.7 58 128-190 2-67 (265)
294 cd00466 DHQase_II Dehydroquina 22.1 80 0.0017 29.7 2.8 66 133-209 20-101 (140)
295 PF05673 DUF815: Protein of un 21.9 1.8E+02 0.0039 30.1 5.6 85 122-229 51-137 (249)
296 PLN02641 anthranilate phosphor 21.4 55 0.0012 35.4 1.8 99 44-188 3-128 (343)
297 cd00012 ACTIN Actin; An ubiqui 20.8 1.1E+02 0.0024 32.8 4.1 46 180-225 73-124 (371)
298 PF11478 Tachystatin_B: Antimi 20.6 34 0.00075 24.4 0.1 16 142-160 1-16 (42)
299 KOG0034 Ca2+/calmodulin-depend 20.6 3.5E+02 0.0076 26.7 7.1 59 23-93 28-93 (187)
300 CHL00200 trpA tryptophan synth 20.2 81 0.0017 32.8 2.7 99 126-231 19-127 (263)
No 1
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=9.9e-165 Score=1354.27 Aligned_cols=584 Identities=58% Similarity=1.010 Sum_probs=500.6
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHhhhhc-hhhh
Q 007399 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (605)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~-~~~~ 79 (605)
|||||||+||.|+|+.....+|+||..||.+|+.+ ..||.++|.+||+++|++. ..+.++|..||++|++..+ ....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 67999999999999999999999999999999876 8999999999999999654 4578999999999985432 2233
Q ss_pred ccCCCCHHHHHHHHcc-CCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEee
Q 007399 80 QRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (605)
Q Consensus 80 ~~~~l~~~gF~~~L~s-~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~W 158 (605)
.++.|+++||++||+| +.|++.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~~--~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPIA--DQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCccc--ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 4567999999999999 4555554 579999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 007399 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (605)
Q Consensus 159 dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~l 238 (605)
||++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 579999999999999999999999999999999999999999999999999999999999999999876667889
Q ss_pred CChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCC--CCCCCC-CCCCCCCc-c
Q 007399 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACD--KDDFDG-GVDNDEED-S 314 (605)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~-~ 314 (605)
|||++||||||||+|++++.++.....+. +.......++++.|+.+.+.+.......+. .+..+. ...++..+ .
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK--DNGEKGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc--cccccccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998776554321110 000111122233344433322211110000 000000 00000000 1
Q ss_pred ccccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCC
Q 007399 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (605)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (605)
..++...++++|++|++|+.+++++++..+++..|.+++++||||.++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223356899999999999999999998888778888999999999999999999999999999999999999999999
Q ss_pred CCCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCC
Q 007399 395 NYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA 474 (605)
Q Consensus 395 N~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~ 474 (605)
||||+.||++|||||||||| |+|++||||+|||+.||+|||||||++||+..+.++.|||....+.
T Consensus 402 NynP~~~W~~GcQMVALN~Q--------------t~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~ 467 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQ--------------GYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCP 467 (598)
T ss_pred CCCchhHhcCceEEeeeccc--------------CCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCc
Confidence 99999999999999999999 9999999999999999999999999999997665568999987777
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+.+|+|+|++|++|+++++++..+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|+|++..||+|+|||.|
T Consensus 468 ~~~L~V~VisGq~~~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V 547 (598)
T PLN02230 468 KKTLKVKVCMGDGWLLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEV 547 (598)
T ss_pred CcEEEEEEEEccCccCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEE
Confidence 88999999999999876666666778899999999999999999999999888889999999999999999999999999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
+|+|..+.++|+||+|+||++|++|||||||+|..|.++.+++|||||+|.
T Consensus 548 ~d~d~~~~ddfiGQ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 548 HEHDINEKDDFGGQTCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EECCCCCCCCEEEEEEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 999988889999999999999999999999999999999999999999985
No 2
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=1.6e-164 Score=1351.05 Aligned_cols=580 Identities=73% Similarity=1.243 Sum_probs=503.2
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhc
Q 007399 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (605)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 80 (605)
|++++||||+||.|+|+......|+||..||.+|++++.||.++|.+||+++|++..++.++|.+||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 8999999999999999999999999999999999977899999999999999999888999999999998632 23
Q ss_pred cCCCCHHHHHHHHccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecC
Q 007399 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (605)
Q Consensus 81 ~~~l~~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG 160 (605)
+++|+++||++||+|+.|.++.+ ..|+|||++|||||||||||||||+||||.|.||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~~-~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLAL-HEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCcc-ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 46799999999999999988863 57999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 007399 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (605)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lP 239 (605)
+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 007399 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (605)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (605)
||++||||||||+|++++.++..... ....+...+++..++.+.++......+.++.+..+..+ +++.+..++.+
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDDE----VVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDSNGDDD-DDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCcccccccccc----cccccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 99999999999999987655432100 00011111222334444443322211111100000000 01111122333
Q ss_pred cccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCcc
Q 007399 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (605)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~ 399 (605)
....+++++|++++.+++++++...++..|.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 45678999999999999888887777666777889999999999999999999999999999999999999999999999
Q ss_pred ccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCCcceEE
Q 007399 400 IGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLK 479 (605)
Q Consensus 400 ~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~ 479 (605)
.||++|||||||||| |+|++||||+|||+.||+|||||||++||+.......|||....|.+.+|+
T Consensus 390 ~~W~~G~QmVALN~Q--------------T~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~ 455 (581)
T PLN02222 390 VGWSHGAQMVAFNMQ--------------GYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLR 455 (581)
T ss_pred hHhcCCcEEeecccc--------------CCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEE
Confidence 999999999999999 999999999999999999999999999998765555799998888888999
Q ss_pred EEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccC
Q 007399 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 559 (605)
Q Consensus 480 V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~ 559 (605)
|+|++|++|++++++...+.++++||||+|+|.|.|.|..++||+++.+|+||+|||+|+|.+..||+|+|||.|+|+|.
T Consensus 456 V~Visgq~~~l~~~~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~ 535 (581)
T PLN02222 456 VTIYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDM 535 (581)
T ss_pred EEEEEcccccCCCCccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCC
Confidence 99999999876656665677789999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 560 SEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 560 ~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
.+.++|+||+++||++|++|||||||+|..|+++.+|+|||||+|.
T Consensus 536 ~~~ddfigq~~lPv~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 536 SEKDDFGGQTCLPVWELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred CCCCcEEEEEEcchhhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 7889999999999999999999999999999999999999999984
No 3
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=1e-159 Score=1309.90 Aligned_cols=559 Identities=56% Similarity=0.969 Sum_probs=485.5
Q ss_pred CcceeeeeeeecccCccCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccC
Q 007399 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (605)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 82 (605)
+++|+||+||.|+++.....+|+||..||.+|++++.|+.++|.+||+++|++...+.+.|.+||++|+.... ...++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNV--FHHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchh--hcccC
Confidence 6899999999999999999999999999999998788999999999999999988889999999999985321 11235
Q ss_pred CCCHHHHHHHHccCCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC
Q 007399 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (605)
Q Consensus 83 ~l~~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~ 162 (605)
.|+++||++||+|+.|.++.++..|+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 69999999999999898886666899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 007399 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (605)
Q Consensus 163 ~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~ 242 (605)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 88899999999999999999999999999999999999999999999999999999999999999998766678899999
Q ss_pred hccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 007399 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (605)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (605)
+||||||||+|+++...+.+... +. ...+.++..+.. . . +.. +...+ ..+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~----------~-----~~~--~~~~~-~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-V----------A-----DAE--NKILE-EYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-c----------c-----cch--hhccc-cccccchh
Confidence 99999999999976543321100 00 000000000000 0 0 000 00000 00111235
Q ss_pred chhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccc
Q 007399 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (605)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W 402 (605)
+++|++|++++..+.++++.......|...+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999999887776666554445666679999999999999999999999999999999999999999999999999
Q ss_pred cccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCCcceEEEEE
Q 007399 403 SHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAKKTLKVTV 482 (605)
Q Consensus 403 ~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~~~L~V~V 482 (605)
++|||||||||| |+|++||||+|||++||+|||||||++||+.. ..|||....|.+.+|+|+|
T Consensus 375 ~~G~QmVALN~Q--------------T~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~---~~f~p~~~~p~~~~L~I~V 437 (567)
T PLN02228 375 THGAQMVAFNMQ--------------GHGKQLWIMQGMFRANGGCGYVKKPRILLDEH---TLFDPCKRLPIKTTLKVKI 437 (567)
T ss_pred cCccEEeeeccc--------------CCChHHHhhcCchhhCCCCCceeCchhhcccc---cccCCccCCCcCceEEEEE
Confidence 999999999999 99999999999999999999999999999753 4799988888778899999
Q ss_pred EeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCee-ccEEEEeeecCCccEEEEEEEeccCCC
Q 007399 483 YMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSE 561 (605)
Q Consensus 483 isaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvW-NEtf~F~v~~pela~Lrf~V~D~D~~~ 561 (605)
|+|++|+.++...+.+..+++||||+|++.|.|.|..++||+++.||+||+| ||+|+|.+..||+|+|||.|+|+|..+
T Consensus 438 iSGq~l~lp~~~~~~~~~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~ 517 (567)
T PLN02228 438 YTGEGWDLDFHLTHFDQYSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDT 517 (567)
T ss_pred EECCccCCCCCCCCCCCCCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCC
Confidence 9999986544444455667899999999999999999999999988999999 999999999999999999999999877
Q ss_pred CCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 562 KDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 562 ~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
.++|+||+++||++|++|||||||+|..|+++.+|+|||||+|.
T Consensus 518 ~d~figq~~lPv~~Lr~GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 518 QNDFAGQTCLPLPELKSGVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred CCCEEEEEEcchhHhhCCeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 89999999999999999999999999999999999999999973
No 4
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-160 Score=1316.49 Aligned_cols=558 Identities=48% Similarity=0.750 Sum_probs=487.9
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhh
Q 007399 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (605)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~ 79 (605)
+.+|+||+|+|++++|.- .++.||||..+|.+|+.+ +.|+.++|.+||+++|++..++.+.|++||++|+..++ ..
T Consensus 182 ~~~~~~k~~~~~~~~~~~-~~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~--~~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRK-ELTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKE--FR 258 (746)
T ss_pred HhhccceehHHHHHHHHH-hhccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhh--cc
Confidence 468999999999999955 467777999999999987 99999999999999999999999999999999996654 12
Q ss_pred ccCCCCHHHHHHHHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEee
Q 007399 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (605)
Q Consensus 80 ~~~~l~~~gF~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~W 158 (605)
....|+++||++||+|+.+.+++| +..|||||++|||||||+||||||||||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 235699999999999999999988 6899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 007399 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (605)
Q Consensus 159 dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~ 237 (605)
||++ ++|+|||||||||+|.|++||+|||+|||++|+|||||||||||+++||++||++|++||||+||.++.+ ..+.
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998765 5899
Q ss_pred CCChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 007399 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (605)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (605)
||||++||||||||+||+++.+..... +..+.....++++.+...+. +++......+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~~---------------------~~~~~~~~d~~~~~e~s~e~--~~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADSK---------------------EPSSFEVTDEDEDKESSTEN--DKSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCcccccccc---------------------cccccccccccccccccccc--cccccccccc
Confidence 999999999999999999876543110 00000000000000000000 0000111122
Q ss_pred cccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCC
Q 007399 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (605)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~ 397 (605)
.....+++|++||+|+.+++++++...++.+ .+++++||||+++.++++..+.+|++||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2236899999999999999999998888764 678899999999999999999999999999999999999999999999
Q ss_pred ccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCC-CCCcc
Q 007399 398 PLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVK-LPAKK 476 (605)
Q Consensus 398 P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~-~p~~~ 476 (605)
|+.||++|||||||||| |+|++||||+|||++||||||||||.+||+. +..|+|... .|++.
T Consensus 554 Pq~~W~~G~QmVAlN~Q--------------t~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~---~~~F~P~~~~~~~~~ 616 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQ--------------TPGRMLDLNQGMFRANGGCGYVLKPDFLLDS---GSTFDPKSNLPPVKK 616 (746)
T ss_pred hHHHHhcCceEEEEecC--------------CCChhhhhhhhhhccCCCccceECcHHHcCC---CCccCCCCCCCCCCc
Confidence 99999999999999999 9999999999999999999999999999984 348999766 44555
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCccEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+|+|+|++|++|+.++.++.. ...+||||.|+|.|+|.|+.+++|+++.+| +||.|+|+|+|++..||||+|||.|+
T Consensus 617 tL~IkI~sGq~~~~~~~~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~ 694 (746)
T KOG0169|consen 617 TLKIKIISGQGWLPDFGKTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVH 694 (746)
T ss_pred eeEEEEEecCcccCCCCCCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEE
Confidence 899999999999765444322 356899999999999999999999977765 99999999999999999999999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|+|..++|||+||+|+|+++|++|||||||+|..|+.+..|+|||||+|.
T Consensus 695 d~d~~~~ddF~GQ~tlP~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 695 DYDYIGKDDFIGQTTLPVSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred ecCCCCcccccceeeccHHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 99999999999999999999999999999999999999999999999973
No 5
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=2.9e-158 Score=1305.25 Aligned_cols=580 Identities=63% Similarity=1.090 Sum_probs=493.9
Q ss_pred CCCcceeeeeeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhh-chhh
Q 007399 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELK-HLNI 78 (605)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~-~~~~ 78 (605)
|...+|++|.||.|+++...++.|+||..||.+|+++ +.||.++|.+||+++|+|..++.++|.+||++|.... +...
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~ 93 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTR 93 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccccc
Confidence 3455899999999999999999999999999999977 8999999999999999998889999999999886332 1223
Q ss_pred hccCCCCHHHHHHHHcc-CCCCCCCCCCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEe
Q 007399 79 FQRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI 157 (605)
Q Consensus 79 ~~~~~l~~~gF~~~L~s-~~n~~~~~~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~ 157 (605)
+.+..|+++||++||+| +.|.+.. ..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||||
T Consensus 94 ~~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~ 171 (599)
T PLN02952 94 YTRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDL 171 (599)
T ss_pred ccccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEe
Confidence 44567999999999999 5666665 47999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 007399 158 WPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKE 237 (605)
Q Consensus 158 WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~ 237 (605)
|||+++++|+||||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.|+.+....
T Consensus 172 wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~ 251 (599)
T PLN02952 172 WPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQ 251 (599)
T ss_pred ecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999987666779
Q ss_pred CCChhhccCcEEEecCCCCchhhhhhhhhhccc---ccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcc
Q 007399 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKEND---SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDS 314 (605)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (605)
||||++||||||||+|+++..++.+.......+ ...+...+++. .+...+..... . .+.+.. .+....
T Consensus 252 lpsP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~-~~~~~~--~~~~~~ 322 (599)
T PLN02952 252 FPSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESMLF---E-QEADSR--SDSDQD 322 (599)
T ss_pred CCChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---ccccccccccc---c-cccccc--ccccch
Confidence 999999999999999998766554321000000 00000000000 00000000000 0 000000 000000
Q ss_pred ccccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCC
Q 007399 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (605)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SS 394 (605)
+.+......+++++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+|||
T Consensus 323 ~~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSs 402 (599)
T PLN02952 323 DNKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSS 402 (599)
T ss_pred hhhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCC
Confidence 11223345789999999999998887777666556677889999999999999999999999999999999999999999
Q ss_pred CCCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCC
Q 007399 395 NYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPA 474 (605)
Q Consensus 395 N~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~ 474 (605)
||||+.||++|||||||||| |+|++||||+|||+.||+|||||||++||+.++.++.|||....|+
T Consensus 403 Ny~P~~~W~~G~QmVAlN~Q--------------t~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~ 468 (599)
T PLN02952 403 NYKPLIGWMHGAQMIAFNMQ--------------GYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPV 468 (599)
T ss_pred CCCchhHhcCccEEeeeccc--------------CCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCc
Confidence 99999999999999999999 9999999999999999999999999999987555568999988888
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+++|+|+||+|++|+++......+.++++||||+|++.|.|.|..+++|+++.||+||+|||+|.|.+..||+|+|+|.|
T Consensus 469 ~~~L~V~VisGq~l~lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V 548 (599)
T PLN02952 469 KKTLKVKVYLGDGWRLDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEV 548 (599)
T ss_pred cceEEEEEEECcccCCCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEE
Confidence 88999999999999865444456777889999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
+|+|..+.++|+||+++||++|++|||||||+|..|++++.++|||||+|.
T Consensus 549 ~D~D~~~~ddfiGq~~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 549 REYDMSEKDDFGGQTCLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EecCCCCCCCeEEEEEcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 999988889999999999999999999999999999999999999999984
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=5.2e-151 Score=1224.16 Aligned_cols=523 Identities=42% Similarity=0.768 Sum_probs=449.5
Q ss_pred eeeecccCccCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHhhhhc-hhhh-ccCC
Q 007399 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (605)
Q Consensus 10 ~~~~~~~~~~~~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~-~~~~-~~~~ 83 (605)
|.|.|+|+.....++++|..+|.+|+++ ..|+.++|.+|| .++|+|..++.++|+.|++++...++ ...+ ..+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 5689999999999999999999999876 999999999999 99999999999999999999875432 3333 3367
Q ss_pred CCHHHHHHHHcc-CCCCCCCCCCCc-ccCCCCcccceeeeccCcccccCCCCCCC-CChHHHHHHHhCCccEEEEEeecC
Q 007399 84 LNLEAFFKYLFG-DINPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (605)
Q Consensus 84 l~~~gF~~~L~s-~~n~~~~~~~~v-~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~-SS~e~Y~~aL~~GCRcvElD~WdG 160 (605)
|+++||++||+| +.|.+.. ..| +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 999999999999 5566554 356 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEeeCCcccccchHHHHHHHHhhhhhccC-CCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 007399 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (605)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~l 238 (605)
++ ++|+|+||||||++|+|+|||+|||+|||++| +||||||||||||++||.+||++|++||||+||+++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 57899999999999999999999999999998 9999999999999999999999999999999999765 557899
Q ss_pred CChhhccCcEEEecCCCCchhhhhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 007399 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (605)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (605)
|||++||||||||+|++++.+++.. ++ +. . . .. ++ .+..
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~-~-~-------~~--~~------~~~~------ 276 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GG-V-G-------VR--NE------LEIQ------ 276 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---cc-c-c-------cc--cc------cccc------
Confidence 9999999999999999875543210 00 00 0 0 00 00 0000
Q ss_pred ccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHh--hcchhHHHhhccceeEEecCCcc-CCCCC
Q 007399 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVG--TYGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (605)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~--~~~~~~~~~~~~~l~RvYP~g~R-i~SSN 395 (605)
.....++|.+++.++..++++.+. +++|.++.++.+ .++.++++||++||+||||+|+| +||||
T Consensus 277 ~~~~~~~y~~li~~~~~~~~~~~~-------------~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 277 EGPADKNYQSLVGFHAVEPRGMLQ-------------KALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred ccccccceeeeeeeeccccccchh-------------hhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 012346788999988877654332 334444444433 24678999999999999999999 59999
Q ss_pred CCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCCCCc
Q 007399 396 YNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKLPAK 475 (605)
Q Consensus 396 ~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~p~~ 475 (605)
|||+.+|++|||||||||| |+|++||||+|||++||+|||||||++||+.++.+ .|||....+.+
T Consensus 344 YnP~~~W~~GcQmVALN~Q--------------T~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~-~FdP~~~~~~~ 408 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRK--------------DDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSG-VFYPTENPVVV 408 (537)
T ss_pred CCChhhcccceeEeeeccC--------------CCChhHHhhcchhccCCCCCceECChhhccCCccc-ccCCCCCcccc
Confidence 9999999999999999999 99999999999999999999999999999875543 79998765567
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.+|+|+||+|++|+.+++++. +..+++||||+|+|.|.|.|+.+++|++..|++||+|||+|+|.+.+||+|+|+|.|+
T Consensus 409 ~~L~V~Visgq~~~~~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~ 487 (537)
T PLN02223 409 KILKVKIYMGDGWIVDFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVY 487 (537)
T ss_pred eEEEEEEEEcccccCCccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEE
Confidence 889999999999975444332 4467899999999999999999999987666799999999999999999999999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|+|..+.++|+||+++||.+|++|||||||+|.+|+++..++|||||+|.
T Consensus 488 D~D~~~~ddfiGQ~~LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 488 DYEVSTADAFCGQTCLPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred ecCCCCCCcEEEEEecchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 99988889999999999999999999999999999999999999999984
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-140 Score=1152.57 Aligned_cols=553 Identities=31% Similarity=0.463 Sum_probs=444.4
Q ss_pred ccCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHhhhhchhhhccCCCCHH
Q 007399 18 VAASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLE 87 (605)
Q Consensus 18 ~~~~~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~ 87 (605)
+..+|.|+||+.||.+++++ .+||+++|.+||++.|++.. ++..++..||++|++... ...+++|+.+
T Consensus 214 l~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~--~a~~gqms~d 291 (1189)
T KOG1265|consen 214 LNKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSD--NAEKGQMSTD 291 (1189)
T ss_pred HHhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchh--hhhccccchh
Confidence 35689999999999999976 89999999999999999975 356889999999996432 2346789999
Q ss_pred HHHHHHccCCCCCCCC-CCCcccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC-CCC
Q 007399 88 AFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDN 165 (605)
Q Consensus 88 gF~~~L~s~~n~~~~~-~~~v~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~-~~~ 165 (605)
||.+||+++.|+++.+ +...++||+||||||||||||||||||+||.|.||+|+|++||+.||||||||||||.+ .+|
T Consensus 292 gf~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~E 371 (1189)
T KOG1265|consen 292 GFVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEE 371 (1189)
T ss_pred hhHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCC
Confidence 9999999999999876 45789999999999999999999999999999999999999999999999999999953 357
Q ss_pred ceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCC
Q 007399 166 VDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPS 240 (605)
Q Consensus 166 piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPS 240 (605)
|||+||.|||+.|.|+|||+||++.||+||+||||||+|||||+.||.+||+|+++||||+|++.|.+ +...|||
T Consensus 372 PvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPs 451 (1189)
T KOG1265|consen 372 PVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPS 451 (1189)
T ss_pred ceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999996533 3468999
Q ss_pred hhhccCcEEEecCCCCchhhhh-h-hhhhccc-----ccCCCCCCccc---cc-----CCC----CCCccccCCCCCC--
Q 007399 241 PESLKRRIIISTKPPKEYLEAK-E-EKEKEND-----SQRGKGSADEE---AW-----GKE----VPNLKSLNNSACD-- 299 (605)
Q Consensus 241 P~~Lk~KIlik~K~~~~~~~~~-~-~~~~~~~-----~~~~~~~~~~~---~~-----~~~----~~~~~~~~~~~~~-- 299 (605)
|++||+|||||+||..-..... . ...+..+ +.......++. .. |.+ -+.+.....+.+.
T Consensus 452 P~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~ 531 (1189)
T KOG1265|consen 452 PEDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAH 531 (1189)
T ss_pred HHHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccc
Confidence 9999999999999753211000 0 0000000 00000000000 00 000 0001000001000
Q ss_pred -C----CCCCCCCCCCC----CccccccccccchhhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcc
Q 007399 300 -K----DDFDGGVDNDE----EDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYG 370 (605)
Q Consensus 300 -~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~ 370 (605)
+ ++.+...++.. .+........+++++|.||.|.....+.+|.-+-+ ...++.|+||+|+++..++++++
T Consensus 532 ~E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~ 610 (1189)
T KOG1265|consen 532 PELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSP 610 (1189)
T ss_pred hhhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCc
Confidence 0 00000000000 00000112246788999998876655555544433 24578899999999999999999
Q ss_pred hhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccccCCCCCcceeecccccccCCceeee
Q 007399 371 NDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYV 450 (605)
Q Consensus 371 ~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYV 450 (605)
.+||.||+++|+||||+|+|||||||+|+.|||+|||||||||| |+|.+||||.|||..||+|||+
T Consensus 611 iefV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQ--------------T~dlaMQlN~g~FEyNG~sGYl 676 (1189)
T KOG1265|consen 611 IEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQ--------------TPDLAMQLNMGMFEYNGGSGYL 676 (1189)
T ss_pred hHHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeecc--------------CccHHHHhhhhheeecCCccce
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred ecCCcccCCCCCCCccCCCCCCCC----cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcce--eecc
Q 007399 451 KKPNFLLQTGPHNEVFDPKVKLPA----KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM--KKTK 524 (605)
Q Consensus 451 LKP~~lr~~~~~~~~f~p~~~~p~----~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k--~kTk 524 (605)
|||+|||++. +.|||....++ ..++.|+|||||-|.. ..+..||+|.+.|+|.|..+ +||+
T Consensus 677 lKPdfmRrpD---r~fdPFse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~rtr 743 (1189)
T KOG1265|consen 677 LKPDFMRRPD---RQFDPFSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEFRTR 743 (1189)
T ss_pred eChHHhhCCC---cCcCCcccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhhhhc
Confidence 9999999974 58999887554 5679999999997731 12346999999999999764 5899
Q ss_pred ccCCC-CCCeecc-EEEEe-eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEE
Q 007399 525 TLEDN-WIPSWNE-EFEFP-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMH 601 (605)
Q Consensus 525 vv~nn-~NPvWNE-tf~F~-v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~ 601 (605)
++.+| +||+|+| .|.|. |..|++|+|||.||++. +.||||..+||+.|++|||||.|++..++++..++|||.
T Consensus 744 t~~~n~~npvy~eepfvF~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~ 819 (1189)
T KOG1265|consen 744 TVQGNSFNPVYEEEPFVFRKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVY 819 (1189)
T ss_pred cccCCCCCcccccCCcccceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEE
Confidence 98876 9999985 59996 88999999999999975 679999999999999999999999999999999999999
Q ss_pred EEE
Q 007399 602 FEF 604 (605)
Q Consensus 602 i~f 604 (605)
|++
T Consensus 820 i~~ 822 (1189)
T KOG1265|consen 820 IVL 822 (1189)
T ss_pred EEe
Confidence 975
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-130 Score=1064.14 Aligned_cols=536 Identities=32% Similarity=0.503 Sum_probs=420.9
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCCCCCCCC-CCcccC-CCCc
Q 007399 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (605)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~~-~~v~qD-M~~P 114 (605)
..++..+|++||..+|+|.++++ ..+++++.+|.+. .....+++.|++++|..||+|..|+.|+++ ..|.+| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 57899999999999999987654 3455666666632 223345678999999999999999999985 467665 9999
Q ss_pred ccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhcc
Q 007399 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (605)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~ 194 (605)
||||||+||||||||||||.++||.|+|+|||++||||||||||||+|| .|+||||||+||||.|.|||++||+|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~-~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDG-KPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCC-CceEEeccceeeeeehHHHHHHHHhhceec
Confidence 9999999999999999999999999999999999999999999999985 799999999999999999999999999999
Q ss_pred CCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhh-hhhhccc--
Q 007399 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKE-EKEKEND-- 270 (605)
Q Consensus 195 S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~-~~~~~~~-- 270 (605)
|+||||||||.|||.+||+.||+.+++||||+|++.|.+ ....||||.|||+|||||+||.+...+-.. ..+.+++
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd~~ 473 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDDHK 473 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccccch
Confidence 999999999999999999999999999999999998765 478999999999999999999764211110 0000000
Q ss_pred ------------------------------------ccCCCCCCc---------cc-----cc-----------------
Q 007399 271 ------------------------------------SQRGKGSAD---------EE-----AW----------------- 283 (605)
Q Consensus 271 ------------------------------------~~~~~~~~~---------~~-----~~----------------- 283 (605)
.+......+ ++ .|
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll~e 553 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLLQE 553 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHHHH
Confidence 000000001 10 01
Q ss_pred -----CCC------------CCC--c------------------------------------------------------
Q 007399 284 -----GKE------------VPN--L------------------------------------------------------ 290 (605)
Q Consensus 284 -----~~~------------~~~--~------------------------------------------------------ 290 (605)
|.. +.+ +
T Consensus 554 ycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m 633 (1267)
T KOG1264|consen 554 YCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEM 633 (1267)
T ss_pred HHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEE
Confidence 000 000 0
Q ss_pred --cccC----CCCCC----------------------------C------------------------------------
Q 007399 291 --KSLN----NSACD----------------------------K------------------------------------ 300 (605)
Q Consensus 291 --~~~~----~~~~~----------------------------~------------------------------------ 300 (605)
+... ..+++ +
T Consensus 634 ~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~F 713 (1267)
T KOG1264|consen 634 RLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAF 713 (1267)
T ss_pred EecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHH
Confidence 0000 00000 0
Q ss_pred -------------------------------------------CCC----CCCCCCC------------------C----
Q 007399 301 -------------------------------------------DDF----DGGVDND------------------E---- 311 (605)
Q Consensus 301 -------------------------------------------~~~----~~~~~~~------------------~---- 311 (605)
+++ ++.+.+. +
T Consensus 714 esLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSF 793 (1267)
T KOG1264|consen 714 ESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSF 793 (1267)
T ss_pred HHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccc
Confidence 000 0000000 0
Q ss_pred -----------Ccc-------------------------------------------------------------cc--c
Q 007399 312 -----------EDS-------------------------------------------------------------DD--K 317 (605)
Q Consensus 312 -----------~~~-------------------------------------------------------------~~--~ 317 (605)
+++ .+ +
T Consensus 794 pk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n~~ 873 (1267)
T KOG1264|consen 794 PKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKNQK 873 (1267)
T ss_pred cccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccCCc
Confidence 000 00 0
Q ss_pred ---------------------------------------------------cccccchhhhcceeeecccccCCcccccc
Q 007399 318 ---------------------------------------------------SQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 318 ---------------------------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
...+++.|+|+||+|+...|+.. .+ +
T Consensus 874 ~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~-~~-~- 950 (1267)
T KOG1264|consen 874 SFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTK-DN-L- 950 (1267)
T ss_pred ceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCcc-cc-c-
Confidence 00123556777777776666321 00 0
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++....|+||.|+|+.|++...+..|+.||+++|+||||+|.|+|||||||+++|++||||||||||
T Consensus 951 ~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~Q------------ 1018 (1267)
T KOG1264|consen 951 ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQ------------ 1018 (1267)
T ss_pred ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeecc------------
Confidence 12334468999999999999988899999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccCCceeeeecCCcccCCCCCCCccCCCCCC----CCcceEEEEEEeccccccCCCCCccCCCCC
Q 007399 427 GDGHGRSLWLMHGMFRANGGCGYVKKPNFLLQTGPHNEVFDPKVKL----PAKKTLKVTVYMGEGWYYDFPHTHFDAYSP 502 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~p~~~~----p~~~~L~V~Visaq~L~~~~~~~~~d~~s~ 502 (605)
|.|++||+|+|+|+.||+|||||||++||.. .|||..+. -.+.+|.|+||.|+.|+. . ..+.
T Consensus 1019 --TgDKpMQmNqa~F~~ngrcGYvLqPs~Mrte-----~fdP~n~e~~~~l~p~~lsv~vigaRHL~k----~---gr~i 1084 (1267)
T KOG1264|consen 1019 --TGDKPMQMNQALFSLNGRCGYVLQPSSMRTE-----KFDPMNPESQRGLLPMTLSVKVLGARHLPK----L---GRSI 1084 (1267)
T ss_pred --CCCchhhhhHHHhhcCCceeeEecchhcccc-----cCCCCChHHhccccceEEEEEEeecccccc----C---CCCc
Confidence 8889999999999999999999999999975 68887641 123569999999998862 1 1245
Q ss_pred CCceEEEEEecCCCCcceeeccccC-CCCCCeec-cEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 503 PDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 503 ~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWN-Etf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
.-|||+|+|.|.+.|..+++|++|. |++||+|| |+|+|.|.+|++|+|||.|+|+|+++...||||+++||.+++.||
T Consensus 1085 ~cPfVevEiiGa~~Dt~~~~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~Gf 1164 (1267)
T KOG1264|consen 1085 ACPFVEVEIIGAEYDTNKFKTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGF 1164 (1267)
T ss_pred cCCcEEEEEeccccCCCceEEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccc
Confidence 5689999999999999988877665 55999999 999999999999999999999999998899999999999999999
Q ss_pred EEEEccCCCCCcccCeEEEEEEEE
Q 007399 581 RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 581 R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|||+|...+.++.|+|||.|++
T Consensus 1165 RsVpLkN~ySEdlELaSLLv~i~m 1188 (1267)
T KOG1264|consen 1165 RSVPLKNGYSEDLELASLLVFIEM 1188 (1267)
T ss_pred eeeecccCchhhhhhhhheeeeEe
Confidence 999999999999999999999986
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=1.3e-108 Score=823.24 Aligned_cols=257 Identities=36% Similarity=0.562 Sum_probs=238.0
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999774 446799999999999999999852
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
+.+++++|+.+..++.++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 1355777777777777777766554
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++..++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q------------ 242 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQ------------ 242 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEeccc------------
Confidence 34556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 243 --t~d~~m~LN~G~F~~N 258 (258)
T cd08629 243 --TPGPEMDVYLGCFQDN 258 (258)
T ss_pred --CCChhHHhhhchhcCC
Confidence 9999999999999987
No 10
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.7e-107 Score=812.19 Aligned_cols=252 Identities=37% Similarity=0.564 Sum_probs=223.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+....+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~Ls----- 154 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRALS----- 154 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchhhh-----
Confidence 999999999999999999999999999999999999999998653 3457899999999999999998542221
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
+|+.+..+..+.++....
T Consensus 155 --------------------------------------------------------------~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 155 --------------------------------------------------------------DLVKYTKSVRVHDIETEA 172 (254)
T ss_pred --------------------------------------------------------------HHhhhcccCCcCcccccc
Confidence 111121111111121111
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 238 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQ----------- 238 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEeccc-----------
Confidence 124578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 239 ---t~d~~m~lN~g~F~~N 254 (254)
T cd08633 239 ---SEGRMLQLNRAKFSAN 254 (254)
T ss_pred ---CCCchhHhhcccccCC
Confidence 9999999999999987
No 11
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=2e-107 Score=816.93 Aligned_cols=256 Identities=34% Similarity=0.594 Sum_probs=236.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999998852
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
++++|++|+.|+.++.++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 246788888888777777776553
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.. ....+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~Q----------- 242 (258)
T cd08630 175 VQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQ----------- 242 (258)
T ss_pred hc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEeccc-----------
Confidence 11 224578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 243 ---T~d~~M~LN~G~F~~N 258 (258)
T cd08630 243 ---TPGYEMDLNAGRFLVN 258 (258)
T ss_pred ---CCChhhhhhcccccCC
Confidence 9999999999999987
No 12
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=3.2e-107 Score=813.90 Aligned_cols=255 Identities=35% Similarity=0.548 Sum_probs=228.3
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~ki--------- 150 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKKI--------- 150 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999998720
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
++++++|+.+..+..+.++....
T Consensus 151 ---------------------------------------------------------~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 151 ---------------------------------------------------------AKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred ---------------------------------------------------------ChhHHHHhhhcCCcCCCCccccc
Confidence 12355555554443333333222
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Q----------- 241 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQ----------- 241 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEeccc-----------
Confidence 11 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 242 ---t~d~~M~LN~G~F~~N 257 (257)
T cd08595 242 ---TLGAPMDLQNGKFLDN 257 (257)
T ss_pred ---CCChhhhhhcCcccCC
Confidence 9999999999999987
No 13
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=5.9e-107 Score=813.64 Aligned_cols=254 Identities=33% Similarity=0.526 Sum_probs=225.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhh
Q 007399 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
|++|||++|+||||||||||| +++||++||+||+++|||+|++++.+. ...||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e--- 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE--- 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc---
Confidence 999999999999999999999 799999999999999999999977532 36899999999999999998421
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
+++|+.+..+..+.+
T Consensus 158 -----------------------------------------------------------------ls~lv~y~~~~kf~~ 172 (261)
T cd08624 158 -----------------------------------------------------------------MSSLVNYIQPTKFVS 172 (261)
T ss_pred -----------------------------------------------------------------chhhhcccCCcCCCC
Confidence 223333333333333
Q ss_pred cccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccc
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~ 420 (605)
+.......+ ..+++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 173 f~~~~~~~~-~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------ 245 (261)
T cd08624 173 FEFSAQKNR-SYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQ------ 245 (261)
T ss_pred cccccccCC-cceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEeccc------
Confidence 333222222 3468999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccC
Q 007399 421 EVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 421 ~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 246 --------T~D~~M~LN~G~F~~n 261 (261)
T cd08624 246 --------TMDLPMQQNMALFEFN 261 (261)
T ss_pred --------CCChhhhhhcccccCC
Confidence 9999999999999987
No 14
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=3.8e-107 Score=808.14 Aligned_cols=251 Identities=33% Similarity=0.557 Sum_probs=222.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++...+
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~el------ 153 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRDL------ 153 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHHH------
Confidence 999999999999999999999999999999999999999987652 346789999999999999999853211
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
++|+.++.+..+.++.+.
T Consensus 154 -------------------------------------------------------------s~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 154 -------------------------------------------------------------SDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred -------------------------------------------------------------HhhhhhccCcccccchhc-
Confidence 111222111111111110
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Q----------- 237 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQ----------- 237 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEeccc-----------
Confidence 112578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 238 ---t~d~~m~LN~g~F~~n 253 (253)
T cd08632 238 ---SEGRMMQLNRAKFMVN 253 (253)
T ss_pred ---CCChhHHhhcccccCC
Confidence 9999999999999987
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=5e-107 Score=812.96 Aligned_cols=256 Identities=34% Similarity=0.581 Sum_probs=231.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977543 4799999999999999999852
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
+.+++++|+.+..+..+.++...-
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 124566666665554444444221
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 175 ~~-~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 242 (258)
T cd08631 175 EH-YHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQ----------- 242 (258)
T ss_pred cc-CccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeeccc-----------
Confidence 11 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 243 ---t~d~~m~LN~G~F~~N 258 (258)
T cd08631 243 ---TAGLEMDLNDGLFRQN 258 (258)
T ss_pred ---CCChhHHhhcchhcCC
Confidence 9999999999999987
No 16
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=1.1e-106 Score=808.81 Aligned_cols=249 Identities=35% Similarity=0.551 Sum_probs=224.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
.|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ ++||||||||||++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccCcEEEecCCCCchhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (605)
|+|||++|+||||||||||||.+||.+||+||+++|||+|++++. + ....||||++||||||||+|+.+
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~------ 153 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAP------ 153 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcH------
Confidence 999999999999999999999999999999999999999998652 1 24689999999999999998842
Q ss_pred hhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcc
Q 007399 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLK 342 (605)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (605)
++++|+.+..+..+.++.
T Consensus 154 --------------------------------------------------------------els~l~~y~~~~k~~~~~ 171 (254)
T cd08596 154 --------------------------------------------------------------ELSDLVIYCQAVKFPGLS 171 (254)
T ss_pred --------------------------------------------------------------HHHHHHHHhcCccCCCCC
Confidence 233444333232223333
Q ss_pred cccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccc
Q 007399 343 ECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEV 422 (605)
Q Consensus 343 ~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~ 422 (605)
.+...+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 172 -----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Q-------- 238 (254)
T cd08596 172 -----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQ-------- 238 (254)
T ss_pred -----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeeccc--------
Confidence 1335688999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccC
Q 007399 423 NFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 423 ~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 239 ------t~d~~m~LN~G~F~~N 254 (254)
T cd08596 239 ------TDDLPMHLNAAMFEAN 254 (254)
T ss_pred ------CCChHHHhhhchhcCC
Confidence 9999999999999987
No 17
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.8e-106 Score=807.14 Aligned_cols=251 Identities=34% Similarity=0.541 Sum_probs=220.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ ++++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhh
Q 007399 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (605)
|++|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~L--- 157 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSSL--- 157 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhhh---
Confidence 999999999999999999999999999999999999999999976432 468999999999999999983110
Q ss_pred hhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCc
Q 007399 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (605)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (605)
+.+..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~~~~~ 169 (257)
T cd08626 158 --------------------------------------------------------------------VNYAQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hcccccCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccc
Q 007399 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421 (605)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~ 421 (605)
....+.. ..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 170 ~~~~~~~-~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------- 241 (257)
T cd08626 170 DVAEERN-IHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQ------- 241 (257)
T ss_pred CchhhcC-CCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEeccc-------
Confidence 1111111 13578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccC
Q 007399 422 VNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 422 ~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 242 -------t~d~~m~LN~G~F~~n 257 (257)
T cd08626 242 -------TPDLGMQLNQGKFEYN 257 (257)
T ss_pred -------CCChhHHhhhccccCC
Confidence 9999999999999987
No 18
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=8.7e-106 Score=803.98 Aligned_cols=251 Identities=33% Similarity=0.524 Sum_probs=222.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +++||||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 007399 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
||+|||++|+||||||||||| +++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs---- 156 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMS---- 156 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchh----
Confidence 999999999999999999999 59999999999999999999997743 24689999999999999998731
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
+|+.|+.+..+.+
T Consensus 157 -------------------------------------------------------------------~Lv~y~~~v~f~~ 169 (258)
T cd08623 157 -------------------------------------------------------------------NLVNYIQPVKFES 169 (258)
T ss_pred -------------------------------------------------------------------cccccccCcccCC
Confidence 1122222222222
Q ss_pred cccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccc
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~ 420 (605)
+....+. ...++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++||||||||||
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Q------ 242 (258)
T cd08623 170 FEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQ------ 242 (258)
T ss_pred ccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecC------
Confidence 2221111 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccC
Q 007399 421 EVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 421 ~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 243 --------T~d~~M~LN~G~F~~~ 258 (258)
T cd08623 243 --------TVDLSMQINMGMYEYN 258 (258)
T ss_pred --------CCCcchhhhcccccCC
Confidence 9999999999999987
No 19
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=1e-105 Score=803.04 Aligned_cols=251 Identities=36% Similarity=0.548 Sum_probs=221.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCC-CCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~-~~piv~HG~Tlts~i~f~dvi~a 186 (605)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ ++|+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhh
Q 007399 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (605)
||+|||++|+|||||||||||+++||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+..+.
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~L--- 157 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSSL--- 157 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchhh---
Confidence 999999999999999999999999999999999999999999977432 368999999999999999983211
Q ss_pred hhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCc
Q 007399 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (605)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (605)
++|..+..+.++
T Consensus 158 --------------------------------------------------------------------~~y~~~~~f~~~ 169 (257)
T cd08591 158 --------------------------------------------------------------------VNYIQPVKFQGF 169 (257)
T ss_pred --------------------------------------------------------------------hccccCCCCCCc
Confidence 000000000111
Q ss_pred ccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccc
Q 007399 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIE 421 (605)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~ 421 (605)
....+. ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Q------- 241 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQ------- 241 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCc-------
Confidence 111111 123578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccC
Q 007399 422 VNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 422 ~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 242 -------t~d~~m~lN~g~F~~N 257 (257)
T cd08591 242 -------TPDLPMQLNQGKFEYN 257 (257)
T ss_pred -------CCChhHHhhcccccCC
Confidence 9999999999999987
No 20
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=1.1e-105 Score=806.10 Aligned_cols=256 Identities=38% Similarity=0.607 Sum_probs=232.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+||||||||||||++||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 9999999999999999999999999999999999999999997743 35789999999999999999852
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
+.+++++|+.+..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 1245666665554433445544332
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Q------------ 241 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQ------------ 241 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeeccc------------
Confidence 2345689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 242 --t~D~~m~LN~G~F~~N 257 (257)
T cd08593 242 --TPGEEMDLNDGLFRQN 257 (257)
T ss_pred --CCChHHHhhhchhcCC
Confidence 9999999999999987
No 21
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=3.4e-105 Score=804.04 Aligned_cols=251 Identities=33% Similarity=0.514 Sum_probs=222.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCC-CCCceEeeCCcccccchHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (605)
.|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ +++|+||||||||++|+|+|||+|
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~ 80 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEA 80 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999952 468999999999999999999999
Q ss_pred HhhhhhccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 007399 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
||+|||++|+||||||||||| +.+||++||++|++||||+|++++.+ ....||||++||||||||+|+..+
T Consensus 81 I~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklSd--- 157 (258)
T cd08625 81 IAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMST--- 157 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeeccc---
Confidence 999999999999999999999 69999999999999999999997754 246899999999999999988421
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
|+.|+.+..+.+
T Consensus 158 --------------------------------------------------------------------Lvvy~~~vkf~~ 169 (258)
T cd08625 158 --------------------------------------------------------------------LVNYIEPVKFKS 169 (258)
T ss_pred --------------------------------------------------------------------ccceecccccCC
Confidence 112222222222
Q ss_pred cccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccc
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGI 420 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~ 420 (605)
+.+.... ...++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++||||||||||
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~Q------ 242 (258)
T cd08625 170 FEAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQ------ 242 (258)
T ss_pred chhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecC------
Confidence 3222111 124578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccC
Q 007399 421 EVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 421 ~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 243 --------T~D~~M~LN~G~F~~n 258 (258)
T cd08625 243 --------TLDLAMQLNMGVFEYN 258 (258)
T ss_pred --------CCCcchhhhcccccCC
Confidence 9999999999999987
No 22
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=1e-104 Score=781.71 Aligned_cols=225 Identities=41% Similarity=0.659 Sum_probs=214.9
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++||+||||||||||||+||||.|+||+|||++||++||||||||||||++ ++|+|||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccCcEEEecCCCCchhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (605)
|+|||++|+|||||||||||+++||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999643
Q ss_pred hhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccc
Q 007399 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (605)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (605)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
++++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 211 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQ----------- 211 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEeccc-----------
Confidence 256899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 212 ---t~d~~m~LN~g~F~~N 227 (227)
T cd08594 212 ---TEGRMLQLNRAKFRAN 227 (227)
T ss_pred ---CCChhhHhhcccccCC
Confidence 9999999999999987
No 23
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=9.1e-105 Score=796.11 Aligned_cols=253 Identities=36% Similarity=0.603 Sum_probs=227.5
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
.|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999986 479999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|+..
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~---------- 149 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLI---------- 149 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcC----------
Confidence 999999999999999999999999999999999999999998664 346799999999999999998741
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
++++++|+.|+.+..+. ... .
T Consensus 150 --------------------------------------------------------~~eLs~l~~y~~~~~~~-~~~-~- 170 (254)
T cd08628 150 --------------------------------------------------------AIELSDLVVYCKPTSKT-KDN-L- 170 (254)
T ss_pred --------------------------------------------------------CHHHHhhHhhhcccccc-cCC-c-
Confidence 24566666665443221 110 1
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||++||++||||||||||
T Consensus 171 ~~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------------ 238 (254)
T cd08628 171 ENPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQ------------ 238 (254)
T ss_pred ccccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeecc------------
Confidence 12334578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 239 --T~d~~M~LN~G~F~~n 254 (254)
T cd08628 239 --TADKYMQLNHALFSLN 254 (254)
T ss_pred --CCChhhhhhhhhccCC
Confidence 9999999999999987
No 24
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=7.9e-103 Score=786.64 Aligned_cols=259 Identities=35% Similarity=0.566 Sum_probs=234.4
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||+|||||||+|+||.|+||+|+|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999987 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999774 3567899999999999999998521
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
.++++++++|+.|..+..+.++.....
T Consensus 151 -----------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 151 -----------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred -----------------------------------------------------ccccHHHHhhhhhhcCcccCCcccccc
Confidence 023467788877765544444443211
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.+...+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Q------------ 244 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQ------------ 244 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeeccc------------
Confidence 2334678999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||++|
T Consensus 245 --t~d~~M~lN~g~F~~N 260 (260)
T cd08597 245 --TPGLMMDLNTGKFLEN 260 (260)
T ss_pred --CCChhhhhhcccccCC
Confidence 9999999999999987
No 25
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=5.6e-102 Score=764.99 Aligned_cols=225 Identities=42% Similarity=0.697 Sum_probs=215.8
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++|||||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||+++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999988654 48999999999999999643
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++||||||||||
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Q------------ 210 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQ------------ 210 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeeccc------------
Confidence 246899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecccccccC
Q 007399 427 GDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 211 --t~d~~m~LN~g~F~~n 226 (226)
T cd08558 211 --TPDLPMQLNQGKFEQN 226 (226)
T ss_pred --CCChhhhhhcccccCC
Confidence 9999999999999976
No 26
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=1.4e-101 Score=764.35 Aligned_cols=229 Identities=38% Similarity=0.648 Sum_probs=215.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
.|||++||+||||+|||||||+||||.|+||+|+|++||++||||||||||||++ ++|+||||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999985 589999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3578999999999999998770 0
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
+
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (231)
T cd08598 150 ---------------------------------------------------------K---------------------- 150 (231)
T ss_pred ---------------------------------------------------------C----------------------
Confidence 0
Q ss_pred cCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Q------------ 215 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQ------------ 215 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEeccc------------
Confidence 01257899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeccccccc
Q 007399 427 GDGHGRSLWLMHGMFRA 443 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~ 443 (605)
|+|++||||+|||+.
T Consensus 216 --t~d~~m~LN~G~F~~ 230 (231)
T cd08598 216 --TYDLGMQLNEAMFAG 230 (231)
T ss_pred --CCChhhhhhcccccC
Confidence 999999999999985
No 27
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=2.6e-101 Score=757.40 Aligned_cols=225 Identities=38% Similarity=0.661 Sum_probs=210.7
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (605)
+||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+|||
T Consensus 2 ~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred ccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999987 5799999999999999999999999
Q ss_pred hhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhhh
Q 007399 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267 (605)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~ 267 (605)
+|||++|+||||||||||||++||.+||+||+++|||+|++++.+ ....||||++||||||||+|+..
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~----------- 149 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY----------- 149 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc-----------
Confidence 999999999999999999999999999999999999999997644 46789999999999999988730
Q ss_pred cccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCccccccc
Q 007399 268 ENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347 (605)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 347 (605)
.
T Consensus 150 --------------------------------------------------------~----------------------- 150 (229)
T cd08627 150 --------------------------------------------------------R----------------------- 150 (229)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred CCCceeeeeccHHHHHHHHh-hcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeeccccccccccccccc
Q 007399 348 DPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFLT 426 (605)
Q Consensus 348 ~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~t 426 (605)
.++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 151 -----~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Q------------ 213 (229)
T cd08627 151 -----DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQ------------ 213 (229)
T ss_pred -----ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeecc------------
Confidence 125788999998875 35689999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeccccccc
Q 007399 427 GDGHGRSLWLMHGMFRA 443 (605)
Q Consensus 427 ~dt~d~~m~lN~g~F~~ 443 (605)
|+|++||||+|||..
T Consensus 214 --t~d~~M~LN~G~F~~ 228 (229)
T cd08627 214 --TPDKPMQMNQALFML 228 (229)
T ss_pred --CCCcchhhhcCcccC
Confidence 999999999999974
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=3.3e-100 Score=752.78 Aligned_cols=227 Identities=39% Similarity=0.675 Sum_probs=214.7
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||+||+++|||+||+++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987644 4678999999999999998762
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeeccHHHHHHHH-hhcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~-~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Q----------- 213 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQ----------- 213 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeecc-----------
Confidence 0235689999999998 478999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 214 ---t~d~~m~lN~g~F~~N 229 (229)
T cd08592 214 ---TPDKPMQLNQALFMLN 229 (229)
T ss_pred ---CCChhHHhhcccccCC
Confidence 9999999999999987
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=2.3e-99 Score=748.25 Aligned_cols=226 Identities=62% Similarity=1.059 Sum_probs=215.2
Q ss_pred ccCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (605)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhhhhhh
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (605)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987554 479999999999999997641
Q ss_pred hcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCCcccccc
Q 007399 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (605)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (605)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeeccHHHHHHHHh-hcchhHHHhhccceeEEecCCccCCCCCCCccccccccceEeeecccccccccccccc
Q 007399 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQEIEEGIEVNFL 425 (605)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~QmVALN~Q~~~~~~~~~~~ 425 (605)
.+++||+|+++.++.+ +++.+|++||++||+||||+|+|+|||||||+.||++||||||||||
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Q----------- 212 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQ----------- 212 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecC-----------
Confidence 2457999999999996 88999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceeecccccccC
Q 007399 426 TGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 426 t~dt~d~~m~lN~g~F~~N 444 (605)
|+|++||||+|||+.|
T Consensus 213 ---t~d~~m~LN~G~F~~N 228 (228)
T cd08599 213 ---GYDRPLWLNRGKFRAN 228 (228)
T ss_pred ---CCChhhhhhcccccCC
Confidence 9999999999999987
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=2.7e-62 Score=503.97 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=211.6
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC-----CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~-----g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 182 (605)
++||++||+||||++||||||.|+|+. |.|+.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999976 579999999999 999999
Q ss_pred HHHHHhhhhhccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecCCCCchhh
Q 007399 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (605)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hc~~--~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (605)
||++|+++||..++||||||||+||+. +||++||++|+++||++|+.|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998766567899999999999999988532100
Q ss_pred hhhhhhhcccccCCCCCCcccccCCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhcceeeecccccCC
Q 007399 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (605)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (605)
. + .+...|. .+
T Consensus 159 ~------------~---~~~~~~~------------------------------------------------------~~ 169 (274)
T cd00137 159 T------------G---SSNDTGF------------------------------------------------------VS 169 (274)
T ss_pred c------------c---cccccCc------------------------------------------------------CC
Confidence 0 0 0000000 00
Q ss_pred cccccccCCCceeeeeccHHHHHH----HHhhcchhHHHhhccceeEEecCCcc---------CCCCCCCccccccc---
Q 007399 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (605)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~----~~~~~~~~~~~~~~~~l~RvYP~g~R---------i~SSN~~P~~~W~~--- 404 (605)
+..... .....++.|++|.++.. +..+...+++.||+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 00123567888888754 33445667899999999999999999 99999999999999
Q ss_pred cceEeeecccccccccccccccCCCCCcceeecccccccC
Q 007399 405 GAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRAN 444 (605)
Q Consensus 405 G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~N 444 (605)
|||||||||| |.|++|+||+|+|+.|
T Consensus 249 g~qiValdfq--------------t~~~~~~ln~~~f~~N 274 (274)
T cd00137 249 GCGIVILDFQ--------------TMDLPMQQYMAVIEFN 274 (274)
T ss_pred CceEEEeeCc--------------CCCccHHHHhhhhccC
Confidence 9999999999 9999999999999976
No 31
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.8e-44 Score=320.87 Aligned_cols=115 Identities=45% Similarity=0.730 Sum_probs=105.5
Q ss_pred hcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccccc
Q 007399 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (605)
Q Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~G~ 406 (605)
++|++|+.++++.++.+.....+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47899998888777776554323 56899999999999999999999999999999999999999999999999999999
Q ss_pred eEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCcc
Q 007399 407 QMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFL 456 (605)
Q Consensus 407 QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~l 456 (605)
|||||||| |+|++||||+|||+.||+|||||||++|
T Consensus 80 QmVAlN~Q--------------t~d~~m~lN~g~F~~NG~cGYVLKP~~l 115 (115)
T smart00149 80 QMVALNFQ--------------TPDKPMQLNQGMFRANGGCGYVLKPDFL 115 (115)
T ss_pred eEeEeecC--------------CCChHHHHHhhHhhcCCCCCeEeCCCCC
Confidence 99999999 9999999999999999999999999986
No 32
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=1.1e-44 Score=325.67 Aligned_cols=118 Identities=37% Similarity=0.644 Sum_probs=90.1
Q ss_pred hhhcceeeecccccCCcccccccCCCceeeeeccHHHHHHHHhhcchhHHHhhccceeEEecCCccCCCCCCCccccccc
Q 007399 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (605)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~Ri~SSN~~P~~~W~~ 404 (605)
||++|++|+.+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 68999998887766655442222 22568899999999999999999999999999999999999999999999999999
Q ss_pred cceEeeecccccccccccccccCCCCCcceeecccccccCCceeeeecCCccc
Q 007399 405 GAQMVAFNMQEIEEGIEVNFLTGDGHGRSLWLMHGMFRANGGCGYVKKPNFLL 457 (605)
Q Consensus 405 G~QmVALN~Q~~~~~~~~~~~t~dt~d~~m~lN~g~F~~NG~cGYVLKP~~lr 457 (605)
|||||||||| |+|++||||+|||++||+|||||||++||
T Consensus 80 G~Q~vALN~Q--------------t~d~~m~ln~g~F~~NG~cGYVLKP~~lR 118 (118)
T PF00387_consen 80 GCQMVALNFQ--------------TPDEPMQLNQGMFRQNGGCGYVLKPEYLR 118 (118)
T ss_dssp T-SEEEB-TT--------------S-SHHHHHHHHHTTTGGG-SEEE--GGGT
T ss_pred cCccceeecc--------------CCChhHHHHHhhhccCCCCCeEeCchhhC
Confidence 9999999999 99999999999999999999999999997
No 33
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=3.1e-40 Score=306.02 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.2
Q ss_pred cCCCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (605)
|||++||+||||++|||||++|+|+.|+++..+|+++|.+||||+|||||++++ ++|+|+||+|+++.++|+|||++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999976 4699999999999999999999999
Q ss_pred hhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 007399 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (605)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~~~~lPSP~~ 243 (605)
++||..+.|||||+||+||+.++|.+||++|+++||++|+.|+.. ....+|||+|
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
No 34
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=6.5e-37 Score=287.49 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=128.9
Q ss_pred CCCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhh
Q 007399 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (605)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 190 (605)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ +++.|+||+++++.++|+|||++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999865 369999999999999999999999999
Q ss_pred hhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecCC
Q 007399 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (605)
Q Consensus 191 AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (605)
+|..+.+||||++++||+.++|..+|++|+++||+.|+.++.. ....+|+|++|||||||..||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 467899999999999999875
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.87 E-value=8e-22 Score=205.01 Aligned_cols=146 Identities=25% Similarity=0.433 Sum_probs=128.2
Q ss_pred cCCCCcccceeeeccCcccccC------------CCC--CCCCChHHHHHHHhCCccEEEEEeecCCC------------
Q 007399 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~g------------~Ql--~g~SS~e~Y~~aL~~GCRcvElD~WdG~~------------ 162 (605)
.+.+.||+||++-.|||+|..| +|+ ...++-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3567899999999999999998 777 44556667899999999999999996543
Q ss_pred -------CCCceEeeCCcc---cccchHHHHHHHHhhhhhc-cCCCceEEEeccCCCH------------HHHHHHHHHH
Q 007399 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (605)
Q Consensus 163 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvIlSlE~Hc~~------------~qQ~~ma~~~ 219 (605)
++...|+|+.++ |+..+|.+||+.||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345789999998 8999999999999999998 7999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CCC------CCCCChhhccCcEEEecCC
Q 007399 220 TQTLGE-ILFTPGS-----ECL------KEFPSPESLKRRIIISTKP 254 (605)
Q Consensus 220 ~~i~Gd-~L~~~~~-----~~~------~~lPSP~~Lk~KIlik~K~ 254 (605)
+++||+ +|++|+. ..+ ..+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999874 222 6899999999999999775
No 36
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.81 E-value=4.3e-19 Score=161.61 Aligned_cols=125 Identities=43% Similarity=0.657 Sum_probs=108.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC-CcceeeccccCCCC-CCeeccEEEEeeecCCccEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~-D~~k~kTkvv~nn~-NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
..|+|+|++|++|+.. .....+..||||+|++.+.+. +..+.||+++.++. ||.|||+|.|.+..++.+.|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~----~~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKP----KGDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCC----CCCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 4699999999999641 111345679999999988665 56788999988774 99999999999998888899999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|||.+.. ++++||++.++++.|..||++++|+++.|++...++|+|+|++.
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999977 79999999999999999999999999999998899999999974
No 37
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.76 E-value=2.5e-18 Score=176.73 Aligned_cols=143 Identities=22% Similarity=0.371 Sum_probs=121.1
Q ss_pred ccCCCCcccceeeeccCcccccCCCCC----------CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc-
Q 007399 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (605)
Q Consensus 108 ~qDM~~PLs~YfI~SSHNTYL~g~Ql~----------g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts- 176 (605)
..||+.||++|+|-.|||+|..+..-. +....-.+...|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 469999999999999999999876532 233344678999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-C---CCCCCChhhcc-
Q 007399 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-C---LKEFPSPESLK- 245 (605)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~-~---~~~lPSP~~Lk- 245 (605)
...|++|++.|+++++....++|||.||+|++..++..+.++|+++||++||.|+.. . ....|+.++|+
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888899999999999999998642 1 46789999996
Q ss_pred -CcEEEec
Q 007399 246 -RRIIIST 252 (605)
Q Consensus 246 -~KIlik~ 252 (605)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7766653
No 38
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.72 E-value=3.6e-17 Score=148.82 Aligned_cols=103 Identities=26% Similarity=0.368 Sum_probs=84.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCC--CCcceeeccccCCCCCCeeccEEEEeeec---CCccEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 551 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p--~D~~k~kTkvv~nn~NPvWNEtf~F~v~~---pela~Lr 551 (605)
+|+|+|++|++|+. .+ .+.+||||+|++.|.. ....+++|+++++++||+|||+|+|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~------~d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKW------QT-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCc------cc-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 48999999999963 12 2678999999998733 22345689999999999999999999974 3457899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
|.|+|+|..+++++||++.+||+++.++- .|.||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998888999999999999998664 577874
No 39
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.66 E-value=7e-16 Score=140.97 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=94.7
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-----CCccEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 552 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-----pela~Lrf 552 (605)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 5799999999963 23456789999999843 57799999999999999999999876 34578999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC--Cc---cEEEEccCCCCCcc-cCeEEEEEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 603 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr--~G---yR~IpL~d~~g~~l-~~atLlv~i~ 603 (605)
.|||++..+++++||++.+||+.+. +| .+|.+|.+..++.- ..+.|.|.|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 55 47899998776543 4578888874
No 40
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.66 E-value=8.7e-16 Score=138.85 Aligned_cols=113 Identities=29% Similarity=0.410 Sum_probs=92.9
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.+||||+|.+.+.+ ..++||++++++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~------~~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITK------GDLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCc------cCCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 7899999999963 2335678999999985432 3577999999999999999999998776567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCccE---EEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.. ++++||++.+|++.+..|.+ +++|.+. +.+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999998865 5677643 25678888876
No 41
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.65 E-value=5.6e-16 Score=140.09 Aligned_cols=99 Identities=18% Similarity=0.193 Sum_probs=82.9
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. .+.+||||+|.+... ....+++|++.+++.||+|||+|.|.|...++ ..|.|
T Consensus 13 ~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL~~ 82 (118)
T cd08677 13 KAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTLTL 82 (118)
T ss_pred CCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEEEE
Confidence 4579999999999851 134799999998532 22457799999999999999999999987666 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCcc--CCccEEE
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAV 583 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sL--r~GyR~I 583 (605)
.|||+|.++++++||++.+|++++ ..|.+|+
T Consensus 83 ~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 83 TLRCCDRFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEeCCCCCCCceEEEEEEccccccCCccccch
Confidence 999999999999999999999975 6777764
No 42
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.64 E-value=5.1e-16 Score=159.35 Aligned_cols=144 Identities=22% Similarity=0.276 Sum_probs=125.1
Q ss_pred CCCCcccceeeeccCcccccCCCC-------CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007399 110 DMTAPVSHYFIYTGHNSYLTGNQL-------NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (605)
Q Consensus 110 DM~~PLs~YfI~SSHNTYL~g~Ql-------~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 182 (605)
+.+.||+++.|-.|||+|..+... .+.+.-..+...|..|+|++|||||..++.+++.|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 468899999999999999887764 2344445678999999999999999876446789999988887899999
Q ss_pred HHHHHhhhhhccCCCceEEEeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-CcEEEecCC
Q 007399 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (605)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hc~~~q---Q~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (605)
|++.|+++.......+|||.||.+++... +..++++|+++||+.++.++ ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999999999999999998875 89999999999999999875 3346789999999 999998654
No 43
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.64 E-value=3.3e-15 Score=135.43 Aligned_cols=116 Identities=24% Similarity=0.370 Sum_probs=95.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
+|+|+|++|++|+. .+..+.+||||++.+.+ ...++|+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 38999999999963 23456789999999854 34679999999999999999999986554 679999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+|..+++++||++.+|+..+..| ..+++|.++.+.. ..++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~-~~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDE-DLGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCcc-CceEEEEEEEE
Confidence 99988899999999999999855 3588999888743 35688888765
No 44
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.63 E-value=1.9e-15 Score=137.85 Aligned_cols=97 Identities=27% Similarity=0.390 Sum_probs=82.6
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEee-ec--CCccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v-~~--pela~Lrf 552 (605)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~------~~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPL------LD-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCC------CC-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 569999999999964 23 4678999999998766566788999999999999999999987 32 23468999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
.|||+|..+++++||++.+||+.+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999998755
No 45
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.63 E-value=5.7e-16 Score=144.02 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=92.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. .+..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~Vi~A~nL~~------~~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l~~ 87 (136)
T cd08406 14 AERLTVVVVKARNLVW------DNGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSLRV 87 (136)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEEEE
Confidence 3469999999999963 234467899999999765444457789999999999999999999876554 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
.|+|+|..+++++||++.++..+..+|++|+ .+++.-++++
T Consensus 88 ~V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~v 129 (136)
T cd08406 88 TVAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKPV 129 (136)
T ss_pred EEEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCee
Confidence 9999998889999999999999888888875 5555545543
No 46
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.62 E-value=6.9e-15 Score=134.06 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.3
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+.|.|+|++|++++. .+ .+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 469999999997632 23 56799999999843 5679999876 59999999999998654 35699999
Q ss_pred EeccCCCCCCccEEEEEECC-ccCCcc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~-sLr~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||+|..+++++||.+.+||. .+.+|. .|.||...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999998999999999996 687774 68899988887644 577776653
No 47
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.61 E-value=5.3e-15 Score=135.35 Aligned_cols=117 Identities=21% Similarity=0.265 Sum_probs=93.1
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIE 553 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~ 553 (605)
+|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++. ..|+|.
T Consensus 1 ~L~V~vi~A~~L~~------~d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMP------KDGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 48999999999963 23346689999999864 56799999999999999999999875432 579999
Q ss_pred EEeccCCC-CCCccEEEEEECCccC-Cc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~-~ddflGq~~lpL~sLr-~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|||.+..+ +++|||++.+|++.+. +| .+|.+|..+.......+.|.++|.|
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 125 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYI 125 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEE
Confidence 99998775 7999999999999986 45 5678997653333345788888876
No 48
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.61 E-value=1e-14 Score=131.32 Aligned_cols=117 Identities=24% Similarity=0.382 Sum_probs=98.2
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++|+. .+..+..||||+|.+.+ .+.+|++++++.||.|||+|.|.+... ...|.|.|||
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~d 69 (119)
T cd08377 2 FLQVKVIRASGLAA------ADIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVYD 69 (119)
T ss_pred EEEEEEEeeeCCCC------CCCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEEE
Confidence 58999999999963 23445689999999854 356999999999999999999997542 3579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
++..+++++||++.+|+..+..|. +|.+|.+..+.....++|.+.++|+
T Consensus 70 ~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 70 EDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred CCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 998778999999999999998775 5779998877776788999999986
No 49
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.61 E-value=6.8e-15 Score=139.08 Aligned_cols=116 Identities=22% Similarity=0.346 Sum_probs=95.8
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
|+|+|++|++|+. .+.++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+|
T Consensus 2 L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~d 70 (150)
T cd04019 2 LRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVED 70 (150)
T ss_pred EEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEEE
Confidence 8999999999963 24457789999999854 5778998877 5999999999999876655789999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc-------cEEEEccCCCC-----Cc-ccCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----ER-YKSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G-------yR~IpL~d~~g-----~~-l~~atLlv~i~f 604 (605)
++..+++++||++.+||+.+..| -+|.||.+..| ++ ...+.|.|+|.|
T Consensus 71 ~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 71 RVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred ecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 99877899999999999998644 57999998865 22 345788888876
No 50
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.61 E-value=6.7e-15 Score=135.06 Aligned_cols=114 Identities=24% Similarity=0.310 Sum_probs=90.3
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++++.- ...+..+.+||||.|.+.+ .+.||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~A~~~~~l---~~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL---RAKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc---cccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 389999999994210 1134557889999999733 5779999999999999999999997654 479999999
Q ss_pred ccCCC------CCCccEEEEEECCccCCccE---EEEccCCCCCcc-cCeEEE
Q 007399 557 YDMSE------KDDFGGQTCLPVSELKQGIR---AVPLHDRKGERY-KSVKLL 599 (605)
Q Consensus 557 ~D~~~------~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l-~~atLl 599 (605)
++..+ ++++||++.+||+.+..|.+ ++||.+.++... ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98763 79999999999999998854 789998775554 445553
No 51
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.60 E-value=1.3e-14 Score=138.37 Aligned_cols=125 Identities=26% Similarity=0.411 Sum_probs=99.7
Q ss_pred cceEEEEEEecccccc-CCC------------C---C--------ccCCCCCCCceEEEEEecCCCCcceeeccccCCCC
Q 007399 475 KKTLKVTVYMGEGWYY-DFP------------H---T--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 530 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~-~~~------------~---~--------~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~ 530 (605)
.++|.|+|+.|++|+. +.. . . .....+.+||||+|.+.+ ....||+++.++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~----~~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAG----ARVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECC----eEeeEEEEeCCCC
Confidence 3569999999999973 100 0 0 002345689999999865 2346899999999
Q ss_pred CCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCccc-CeEEEEEEEEC
Q 007399 531 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYK-SVKLLMHFEFI 605 (605)
Q Consensus 531 NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~-~atLlv~i~f~ 605 (605)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|+++. .+.|.|+++|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999988654 357999999999775 689999999999998775 68999999999885 58999999985
No 52
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.60 E-value=5.8e-15 Score=135.18 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=85.6
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|.|+|++|++|+.. . ...+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~Vi~a~~L~~~---~--~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~~ 88 (125)
T cd04029 14 TQSLNVHVKECRNLAYG---D--EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQL 88 (125)
T ss_pred CCeEEEEEEEecCCCcc---C--CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 35699999999999631 1 12356899999998653333457799999999999999999999876544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---cEEEEcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~ 586 (605)
.|||+|..+++++||++.++|.++... -+|+||.
T Consensus 89 ~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 89 SVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 999999888899999999999998533 4677873
No 53
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.59 E-value=9e-15 Score=133.82 Aligned_cols=104 Identities=19% Similarity=0.241 Sum_probs=84.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
..|.|+|+.|++|+. .+.. +.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 15 ~~L~V~vi~a~~L~~------~d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~~ 88 (125)
T cd08393 15 RELHVHVIQCQDLAA------ADPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLNL 88 (125)
T ss_pred CEEEEEEEEeCCCCC------cCCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 469999999999964 1222 56899999999765544567899999999999999999999875444 48999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc---cEEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL 585 (605)
.|||+|..+++++||++.+||..+..+ -.|.+|
T Consensus 89 ~V~d~~~~~~~~~iG~~~i~L~~~~~~~~~~~W~~L 124 (125)
T cd08393 89 SVWHRDSLGRNSFLGEVEVDLGSWDWSNTQPTWYPL 124 (125)
T ss_pred EEEeCCCCCCCcEeEEEEEecCccccCCCCcceEEC
Confidence 999999888899999999999998544 245555
No 54
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.58 E-value=4.8e-15 Score=137.10 Aligned_cols=114 Identities=13% Similarity=0.199 Sum_probs=89.6
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCcc-EE
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELA-LL 550 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela-~L 550 (605)
|....|+|+|+.|++|+. .+....+||||+|++.+.+.+..|+||++++++ .||+|||+|.|+|..++.. .|
T Consensus 11 p~~~rLtV~VikarnL~~------~~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l 84 (135)
T cd08692 11 AVNSRIQLQILEAQNLPS------SSTPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQF 84 (135)
T ss_pred CcCCeEEEEEEEccCCCc------ccCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEE
Confidence 445679999999999963 112345699999999988888788999999999 5799999999999876553 67
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC-CccEEE-EccCCCCCc
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGIRAV-PLHDRKGER 592 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr-~GyR~I-pL~d~~g~~ 592 (605)
.+.|||.|..+++++||++.++.++.. .|.+|+ .+++.-+++
T Consensus 85 ~v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 85 LIKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 888999988888999999999998753 456665 555444444
No 55
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.58 E-value=1.1e-14 Score=137.31 Aligned_cols=108 Identities=23% Similarity=0.276 Sum_probs=88.4
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-----------C
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 545 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-----------p 545 (605)
+|.|+|+.|++|+. ..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. |
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 38999999999953 2356899999999875555567899999999999999999999851 1
Q ss_pred --C--ccEEEEEEEeccCCCCCCccEEEEEECCccCCc----cEEEEccCCCCCc
Q 007399 546 --E--LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 592 (605)
Q Consensus 546 --e--la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G----yR~IpL~d~~g~~ 592 (605)
+ ...|.|.|||++..++++|||++.||+..+..+ -.|.+|.+.....
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2 357999999999877899999999999999876 3588997665554
No 56
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.58 E-value=1.9e-14 Score=132.36 Aligned_cols=122 Identities=25% Similarity=0.370 Sum_probs=95.9
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCC-C-CcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-A-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p-~-D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+.. . ...+.+|++++++.||+|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~------~d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAK------KDIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCc------ccCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 38999999999963 2345678999999997642 1 12356899999999999999999998643 45789999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc---------cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG---------IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G---------yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
||++..+++++||++.++++++..+ -+|.||....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 9999888899999999999998643 25778886544444567999999874
No 57
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.58 E-value=1.2e-14 Score=133.84 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=85.3
Q ss_pred ceEEEEEEeccccccCCCCCccCC-CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~-~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
..|.|+|+.|++|+. .+. .+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~L~V~V~~a~nL~~------~d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L~v 88 (128)
T cd08392 15 SCLEITIKACRNLAY------GDEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQLQV 88 (128)
T ss_pred CEEEEEEEecCCCCc------cCCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEEEE
Confidence 569999999999963 122 266899999999765555568899999999999999999999876544 58999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc------cEEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG------IRAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G------yR~IpL 585 (605)
.|||.+..+++++||++.|||+.+.-. .+|.||
T Consensus 89 ~V~~~~~~~~~~~lG~~~i~L~~~~~~~~~~~~~~W~~l 127 (128)
T cd08392 89 SVWHSRTLKRRVFLGEVLIPLADWDFEDTDSQRFLWYPL 127 (128)
T ss_pred EEEeCCCCcCcceEEEEEEEcCCcccCCCCccccceEEC
Confidence 999999888899999999999988432 356665
No 58
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.57 E-value=3.8e-15 Score=138.79 Aligned_cols=115 Identities=19% Similarity=0.168 Sum_probs=90.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|+.|++|+. ...+....+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~V~karnL~~----~d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L~~ 89 (138)
T cd08407 14 ANRLLVVVIKAKNLHS----DQLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSVEL 89 (138)
T ss_pred CCeEEEEEEEecCCCc----cccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEEEE
Confidence 4569999999999964 11112233799999999765444457899999999999999999999886655 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
+|+|+|..+++++||++.+++.+-.++.+|+ .+++.-++++
T Consensus 90 ~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~v 131 (138)
T cd08407 90 EVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQI 131 (138)
T ss_pred EEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCch
Confidence 9999999999999999999999876666655 5555555543
No 59
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.57 E-value=2.4e-14 Score=134.59 Aligned_cols=108 Identities=21% Similarity=0.223 Sum_probs=87.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|.|+|+.|++|+.. .+..+.+||||++.+.+......++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 4699999999999531 12345689999999976444445889999999999999999999998 45568999999
Q ss_pred -eccCCCCCCccEEEEEECCccCCcc---EEEEccCCC
Q 007399 556 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 589 (605)
Q Consensus 556 -D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~ 589 (605)
|++..+++++||++.++|+.+..+. .|.+|.+..
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~~ 140 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPTS 140 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCcc
Confidence 6777788999999999999996553 577887653
No 60
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.56 E-value=1.2e-14 Score=130.07 Aligned_cols=102 Identities=19% Similarity=0.170 Sum_probs=85.4
Q ss_pred eEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC---ccEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 552 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~Lrf 552 (605)
.|+|+|++|++|+. .+.. +.+||||+|.+.+.. ....+|++++++.||+|||+|.|.+..++ ...|.|
T Consensus 2 ~L~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~ 73 (111)
T cd04041 2 VLVVTIHRATDLPK------ADFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLSC 73 (111)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEEE
Confidence 58999999999963 2334 568999999986532 34679999999999999999999887653 368999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEEEcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~ 586 (605)
.|||+|..+++++||++.+++..|.+--+|.||+
T Consensus 74 ~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 74 RLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 9999998888999999999999998777888875
No 61
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.56 E-value=3.2e-14 Score=128.11 Aligned_cols=113 Identities=26% Similarity=0.322 Sum_probs=90.7
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+++|+++.+ +.||+|||+|.|.+..+....|.|.||
T Consensus 2 ~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v~ 70 (118)
T cd08681 2 TLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAVF 70 (118)
T ss_pred EEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEEE
Confidence 59999999999963 24456789999999854 4678988765 689999999999998766678999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|++..+ +++||++.++++.+..| -.|.+|.+. |+ ..+.|.+++.|
T Consensus 71 d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~~-~~--~~G~i~l~l~f 118 (118)
T cd08681 71 DDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTLK-GR--YAGEVYLELTF 118 (118)
T ss_pred eCCCCC-CcceEEEEEecHHHhhcCCCCCcEEeccC-Cc--EeeEEEEEEEC
Confidence 999766 89999999999987544 457788753 33 34688888875
No 62
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.56 E-value=5.3e-14 Score=126.29 Aligned_cols=110 Identities=24% Similarity=0.364 Sum_probs=90.1
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.+||||++.+.+ .+.+|++++++.||.|||+|.|.+..+....|.|.|||+
T Consensus 2 ~~V~v~~a~~L~~------~~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPP------MDDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCC------CCCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999963 23346789999999843 567899999999999999999998766567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+..+++++||++.++|+.+..+- .|++|.+. .+.|++.+.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987653 36688764 2567776654
No 63
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.55 E-value=5e-14 Score=128.25 Aligned_cols=110 Identities=29% Similarity=0.395 Sum_probs=92.2
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. . .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~------~----~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPA------N----SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCc------c----cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 8999999999953 1 479999999843 477999999999999999999998766667899999999
Q ss_pred cCCCCCCccEEEEEECCccCC--------ccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~--------GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.. ++++||++.++++.+.. .-+|.+|.+..+.. ..+.|.+.|+|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~-~~G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGR-VGGELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCc-cceEEEEEEEe
Confidence 976 68999999999999853 24899999887733 34688888887
No 64
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.55 E-value=2.5e-14 Score=127.79 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=78.6
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEVH 555 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V~ 555 (605)
.|.|+|++|++|+.. +........+||||+|.+. ..++||++++++.||+|||+|.|.+...+. ..|.|.||
T Consensus 2 ~l~v~v~~A~~L~~~--~~~~~~~~~~DPYv~v~~~-----~~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V~ 74 (108)
T cd04039 2 VVFMEIKSITDLPPL--KNMTRTGFDMDPFVIISFG-----RRVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKVL 74 (108)
T ss_pred EEEEEEEeeeCCCCc--cccCCCCCccCceEEEEEC-----CEeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEEE
Confidence 589999999999631 0001112347999999973 256799999999999999999999876554 47999999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
|+|..+++++||++.++|+.|..|+
T Consensus 75 D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 75 DKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred ECCCCCCCcceEEEEEEHHHHHhhC
Confidence 9998888999999999999998776
No 65
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.55 E-value=1e-14 Score=135.04 Aligned_cols=113 Identities=20% Similarity=0.185 Sum_probs=91.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 244567899999998754333456789999999999999999999875443 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
.|||+|..+++++||++.+++.+...|.+++ +|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999999888999999999999977777665 6677778775
No 66
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.54 E-value=6.1e-14 Score=127.34 Aligned_cols=105 Identities=24% Similarity=0.334 Sum_probs=83.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-CC--ccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PE--LALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-pe--la~Lr 551 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. .+ ...|+
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l~ 88 (125)
T cd04031 15 TSQLIVTVLQARDLPP------RDDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTLE 88 (125)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEEE
Confidence 3569999999999953 233467899999999765445567899999999999999999998643 22 36899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC--CccEEEEc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK--QGIRAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr--~GyR~IpL 585 (605)
|.|||++..+++++||++.++|+... .+-.|.||
T Consensus 89 ~~V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~W~~L 124 (125)
T cd04031 89 VTVWDYDRDGENDFLGEVVIDLADALLDDEPHWYPL 124 (125)
T ss_pred EEEEeCCCCCCCcEeeEEEEecccccccCCcceEEC
Confidence 99999998888999999999999732 22456665
No 67
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.54 E-value=1.1e-13 Score=126.81 Aligned_cols=115 Identities=19% Similarity=0.273 Sum_probs=92.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|+|+|++|++|+. . +.+||||+|.+.+ ....||++. ++.||.|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~----~-----~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPV----K-----HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCC----C-----CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 359999999999963 1 2469999999954 234678864 5799999999999977666667889999
Q ss_pred eccCCCCCCccEEEEEECCccCCcc---EEEEccCCCC-CcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g-~~l~~atLlv~i~f 604 (605)
|++..+++++||++.+||..+.+|. .|.+|....+ ..-..+.|.+++.|
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~ 122 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARY 122 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEE
Confidence 9998888999999999999998886 4788876654 22345788888877
No 68
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.53 E-value=3.8e-14 Score=129.80 Aligned_cols=97 Identities=21% Similarity=0.351 Sum_probs=80.7
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|.|+|+.|++|+. .+..+.+||||+|.+.+.... ..++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~V~~arnL~~------~~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~L~ 86 (124)
T cd08680 13 DSSLVISVEQLRNLSA------LSIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKTLQ 86 (124)
T ss_pred CCEEEEEEeEecCCcc------cccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCEEE
Confidence 3469999999999963 133456899999999654332 357899999999999999999999877665 4899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.||+.+..+++++||++.++|+.+.
T Consensus 87 ~~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 87 VDVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEeCCCCCceeEEEEEEEEhhhcc
Confidence 99999998888999999999999884
No 69
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.53 E-value=1.9e-14 Score=133.16 Aligned_cols=113 Identities=19% Similarity=0.237 Sum_probs=91.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 14 ~~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 87 (136)
T cd08402 14 AGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHLIV 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 234567899999998654334456789999999999999999999875554 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEE-EEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~-IpL~d~~g~~l 593 (605)
.|||++..+++++||++.+++.+...++.| .+|+...++++
T Consensus 88 ~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 88 TVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 999999888899999999999998777754 47776666654
No 70
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.52 E-value=9.7e-14 Score=126.91 Aligned_cols=116 Identities=24% Similarity=0.319 Sum_probs=92.6
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|++|++|+. ..+.+||||.+.+.+ ...++||+++.++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999852 346789999999742 1346799999999999999999999853 346799999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCC-cccCeEEEEEEEEC
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGE-RYKSVKLLMHFEFI 605 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~-~l~~atLlv~i~f~ 605 (605)
+..+++++||++.++++.+..+ -.++||....++ .-..++|.+++.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 9888899999999999998754 346788766443 22467999999884
No 71
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.52 E-value=1.1e-13 Score=128.69 Aligned_cols=113 Identities=25% Similarity=0.413 Sum_probs=90.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+. ..++||++++++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~-----~~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMG-----SQEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCC------CCCCCCcCcEEEEEEC-----CEeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 579999999999853 2345678999999973 25789999999999999999999998777788999999
Q ss_pred eccCCCCCCccEEEEEECCccCC------c--cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~------G--yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|+|..+++++||++.+++.++.. + +++++|. ....+.+.+.|.|
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~-----~~~~g~i~l~~~~ 135 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLH-----EVPTGEVVVKLDL 135 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEeccc-----cccceeEEEEEEe
Confidence 99988889999999999999864 2 2455553 2233456666654
No 72
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.52 E-value=6.7e-14 Score=123.88 Aligned_cols=96 Identities=27% Similarity=0.362 Sum_probs=81.6
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++...|.|.|+|+
T Consensus 2 L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPL------AKSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCC------cccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 8899999999964 23346789999999865 677899999999999999999999988888999999998
Q ss_pred cCCCCCCccEEEEEECCccCCc-----cEEEEccC
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 587 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G-----yR~IpL~d 587 (605)
+. +++||++.++|..+..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 36778864
No 73
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.52 E-value=8.3e-14 Score=126.61 Aligned_cols=103 Identities=23% Similarity=0.288 Sum_probs=83.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|++|++|+. .+..+..||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+|
T Consensus 15 ~~~L~V~v~~a~~L~~------~d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~~ 86 (124)
T cd08385 15 SNQLTVGIIQAADLPA------MDMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLVF 86 (124)
T ss_pred CCEEEEEEEEeeCCCC------ccCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEEE
Confidence 3569999999999963 23345689999999864 33457799999999999999999999876544 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
.|||+|..+++++||++.+||+.+..|. .|.+|
T Consensus 87 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~~~W~~l 122 (124)
T cd08385 87 SVYDFDRFSKHDLIGEVRVPLLTVDLGHVTEEWRDL 122 (124)
T ss_pred EEEeCCCCCCCceeEEEEEecCcccCCCCcceEEEc
Confidence 9999998888999999999999986553 34454
No 74
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.52 E-value=1.2e-13 Score=123.74 Aligned_cols=111 Identities=29% Similarity=0.458 Sum_probs=90.7
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++++. .+..+..||||+|.+.+ ...++|+++.++.||.|||+|.|.+.......|.|.|||+
T Consensus 1 l~v~vi~a~~L~~------~~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPS------ADRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCC------CCCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 5799999999863 12345679999999865 3457899999999999999999998765567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 600 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv 600 (605)
+..+++++||++.+++..+..| .+++||....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999887 6789998766654 345664
No 75
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.51 E-value=1.6e-13 Score=125.43 Aligned_cols=109 Identities=27% Similarity=0.382 Sum_probs=91.3
Q ss_pred EEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccC
Q 007399 482 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 559 (605)
Q Consensus 482 Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~ 559 (605)
|++|++|+. ..+..||||+|.+.+ .+++|++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888842 345689999999854 467999999999999999999998754 45789999999998
Q ss_pred CCCCCccEEEEEECCccCCcc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 560 SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 560 ~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
.+++++||++.++|+.+..+. .++||.+..+.++. +.|.+.+.|
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~ 115 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSY 115 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEE
Confidence 888999999999999987664 47899999888765 688888876
No 76
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.51 E-value=1.6e-13 Score=124.65 Aligned_cols=114 Identities=25% Similarity=0.318 Sum_probs=89.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.+||||+|.+.+ .+.+|+++.++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~v~vi~a~~L~~------~d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d~ 70 (123)
T cd04025 2 LRCHVLEARDLAP------KDRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWDW 70 (123)
T ss_pred EEEEEEEeeCCCC------CCCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEEC
Confidence 8999999999853 23345689999999743 467899999999999999999998876667899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCc----ccCeEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGER----YKSVKLLMHF 602 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~----l~~atLlv~i 602 (605)
+..+++++||++.++|..+..+ -.|..|.....+. -..++|.+.|
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~~~~~~~~~~~~G~l~~~~ 122 (123)
T cd04025 71 DLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLPDPRAEEESGGNLGSLRLKV 122 (123)
T ss_pred CCCCCCcEeEEEEEEHHHcccCCCCCCEEECCCCCCCCccccCceEEEEEEe
Confidence 9888899999999999998654 3567776533321 1235666655
No 77
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.51 E-value=1.4e-13 Score=125.47 Aligned_cols=105 Identities=28% Similarity=0.352 Sum_probs=84.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.|
T Consensus 15 ~~~L~V~vi~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~i 88 (127)
T cd04030 15 RQKLIVTVHKCRNLPP------CDSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLDV 88 (127)
T ss_pred CCEEEEEEEEEECCCC------ccCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEEE
Confidence 3569999999999963 233567899999999765444567899999999999999999999865543 57999
Q ss_pred EEEeccCC--CCCCccEEEEEECCccCCcc---EEEEc
Q 007399 553 EVHEYDMS--EKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 553 ~V~D~D~~--~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
.|||.+.. +++++||++.++|..|..+. +|.+|
T Consensus 89 ~v~~~~~~~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 126 (127)
T cd04030 89 AVKNSKSFLSREKKLLGQVLIDLSDLDLSKGFTQWYDL 126 (127)
T ss_pred EEEECCcccCCCCceEEEEEEecccccccCCccceEEC
Confidence 99999864 67899999999999985443 35554
No 78
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.51 E-value=4e-14 Score=130.37 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=89.0
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+.+......+.||++++++.||+|||+|.|.+..+++ ..|.|
T Consensus 12 ~~~L~V~Vi~a~~L~~------~d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~~ 85 (133)
T cd08384 12 RRGLIVGIIRCVNLAA------MDANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLEI 85 (133)
T ss_pred CCEEEEEEEEEcCCCC------cCCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEEE
Confidence 4569999999999963 234467899999999764434456799999999999999999999876654 47999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
.|||+|..+++++||++.+++.+..+... |..++..-++++
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 86 TVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 99999988889999999999987544433 446666556654
No 79
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.51 E-value=5.3e-14 Score=132.62 Aligned_cols=92 Identities=28% Similarity=0.440 Sum_probs=80.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|.+|.. .|..+.+||||.+++.+ ++.||+++.+|.||+|||+|+|.+..+ ...|.+.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~-~~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDP-NTPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCC-CceEEEEEE
Confidence 469999999999853 34446789999999865 688999999999999999999999887 457999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
|+|.++++||+|.+.|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999988654
No 80
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.50 E-value=8.2e-14 Score=126.58 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=79.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|.|+|+.|++|+. .+ .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~------~~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRS------TN-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCC------CC-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 569999999999853 23 357899999999765555567799999999999999999999865443 4688999
Q ss_pred EeccCCC-CCCccEEEEEECCccCCc
Q 007399 555 HEYDMSE-KDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 555 ~D~D~~~-~ddflGq~~lpL~sLr~G 579 (605)
||.+... ++++||++.||+..+..|
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~ 110 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQ 110 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccC
Confidence 9998764 478999999999998655
No 81
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.50 E-value=7.8e-14 Score=124.59 Aligned_cols=99 Identities=25% Similarity=0.330 Sum_probs=83.0
Q ss_pred EEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCee-ccEEEEeeecCCc--cEEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvW-NEtf~F~v~~pel--a~Lrf~ 553 (605)
|+|+|++|++|+. .+ ..+.+||||+|.+.+ .++||++++++.||.| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~------~d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPV------MDRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCc------cccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 6899999999963 12 235679999999843 6789999999999999 9999999977654 589999
Q ss_pred EEeccCCCCCCccEEEEEECCccCC---cc---EEEEccC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHD 587 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~---Gy---R~IpL~d 587 (605)
|||+|..+++++||++.+++..|.. +. +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999865 33 5788887
No 82
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.50 E-value=2.1e-13 Score=124.37 Aligned_cols=113 Identities=20% Similarity=0.355 Sum_probs=90.9
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||+|||+|.|.+.. ...|.|.|||+
T Consensus 2 l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d~ 69 (123)
T cd08382 2 VRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFDQ 69 (123)
T ss_pred eEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEEC
Confidence 8999999999853 24457789999999854 356789999999999999999999854 56899999999
Q ss_pred cCCCC--CCccEEEEEECCccC-C---ccEEEEccCCCCC--cccCeEEEEEE
Q 007399 558 DMSEK--DDFGGQTCLPVSELK-Q---GIRAVPLHDRKGE--RYKSVKLLMHF 602 (605)
Q Consensus 558 D~~~~--ddflGq~~lpL~sLr-~---GyR~IpL~d~~g~--~l~~atLlv~i 602 (605)
+..++ +++||++.++++.|. . +..|.||++.... ....++|.+++
T Consensus 70 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 70 KKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 87664 479999999999974 2 3679999776653 23357888875
No 83
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.49 E-value=1.8e-13 Score=124.48 Aligned_cols=103 Identities=21% Similarity=0.309 Sum_probs=83.3
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 553 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+. +....++||++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 16 ~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~i~ 87 (124)
T cd08387 16 GILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLEVL 87 (124)
T ss_pred CEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEEEE
Confidence 569999999999963 2344678999999984 333456799999999999999999999875543 479999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
|||+|..+++++||++.++|+.+..|- .|.+|.
T Consensus 88 V~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~l~ 123 (124)
T cd08387 88 LYDFDQFSRDECIGVVELPLAEVDLSEKLDLWRKIQ 123 (124)
T ss_pred EEECCCCCCCceeEEEEEecccccCCCCcceEEECc
Confidence 999998888999999999999997553 345553
No 84
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.49 E-value=1.2e-13 Score=130.56 Aligned_cols=107 Identities=24% Similarity=0.363 Sum_probs=82.6
Q ss_pred eEEEEEEeccccccCCCCC--------ccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-
Q 007399 477 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 547 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~--------~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel- 547 (605)
+|.|+|+.|++|+.-.... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..|+.
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 3789999999997410000 001224679999999866 45689999999999999999999877765
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCC-c---------cEEEEccCC
Q 007399 548 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---------IRAVPLHDR 588 (605)
Q Consensus 548 a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~-G---------yR~IpL~d~ 588 (605)
..|.|+|||+|..+++++||++.++|..+.. | -+|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999998742 2 266777654
No 85
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.49 E-value=5.5e-14 Score=129.81 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=90.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||.|||+|.|.+...++ ..|.|
T Consensus 13 ~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~~ 86 (134)
T cd08403 13 AGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLII 86 (134)
T ss_pred CCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEEE
Confidence 3569999999999963 244567899999998643333456789999999999999999999864443 46899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccEEE-EccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR~I-pL~d~~g~~l 593 (605)
.|||+|..+++++||++.+|+.....|++++ .|....|+++
T Consensus 87 ~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 87 AVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 9999999888999999999999877887654 6666666654
No 86
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.49 E-value=2e-13 Score=123.55 Aligned_cols=105 Identities=20% Similarity=0.286 Sum_probs=83.6
Q ss_pred cceEEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|+|+|++|++|+. .+ ..+..||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~L~V~v~~a~~L~~------~~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l~ 86 (123)
T cd08521 13 TGSLEVHIKECRNLAY------ADEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTLQ 86 (123)
T ss_pred CCEEEEEEEEecCCCC------cCCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 3569999999999963 12 3356899999998653333356899999999999999999999876543 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc---cEEEEc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL 585 (605)
|.|||++..+++++||++.++|+.+..| -.|.||
T Consensus 87 i~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~l 123 (123)
T cd08521 87 LSVWHHDRFGRNTFLGEVEIPLDSWDLDSQQSEWYPL 123 (123)
T ss_pred EEEEeCCCCcCCceeeEEEEecccccccCCCccEEEC
Confidence 9999999888899999999999999644 245554
No 87
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.49 E-value=5.9e-14 Score=130.11 Aligned_cols=112 Identities=17% Similarity=0.172 Sum_probs=86.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 553 (605)
+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||+|||+|.|.+...++ ..|+|.
T Consensus 14 ~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~F~f~i~~~~l~~~~l~~~ 87 (135)
T cd08410 14 GRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRGTIDPFYNESFSFKVPQEELENVSLVFT 87 (135)
T ss_pred CeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccCCCCCccceeEEEeCCHHHhCCCEEEEE
Confidence 569999999999963 244567899999998542222345789999999999999999999876555 369999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc--cEEEEccCCCCCcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRKGERY 593 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~G--yR~IpL~d~~g~~l 593 (605)
|||+|..+++++||++.|...+.... -.|-.|++..++++
T Consensus 88 V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 88 VYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred EEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 99999888999999998877665542 23457777777765
No 88
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.49 E-value=4e-13 Score=122.33 Aligned_cols=117 Identities=22% Similarity=0.315 Sum_probs=93.9
Q ss_pred eEEEEEEeccccccCCCCCccCC--CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDA--YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~--~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.|+|+|++|++|+. .+. .+.+||||+|.+.+ .+.+|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~------~~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v 70 (128)
T cd04024 2 VLRVHVVEAKDLAA------KDRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLIL 70 (128)
T ss_pred EEEEEEEEeeCCCc------ccCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEE
Confidence 58999999999963 233 46789999998732 567999999999999999999999875567899999
Q ss_pred EeccCCCCCCccEEEEEECCccC----Cc--cEEEEccCCCCC--cccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr----~G--yR~IpL~d~~g~--~l~~atLlv~i~f 604 (605)
||++..+.+++||++.+++..+. .| -.|++|.+.... ....++|.++|.|
T Consensus 71 ~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 71 WDKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred EECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 99998878999999999999885 23 367888876332 2345788888865
No 89
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.48 E-value=2.6e-13 Score=124.73 Aligned_cols=94 Identities=22% Similarity=0.331 Sum_probs=76.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCC-CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~-s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
..|+|+|++|++|+. .+.. +.+||||+|.+.+ .+..+.||++++++.||+|||+|.|. +...++ ..|+
T Consensus 16 ~~L~V~Vi~a~~L~~------~~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L~ 87 (128)
T cd08388 16 KALLVNIIECRDLPA------MDEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSLH 87 (128)
T ss_pred CEEEEEEEEeECCCC------CCCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEEE
Confidence 569999999999964 1222 5689999999853 34456799999999999999999993 443222 4699
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.|||+|..+++++||++.+||+.+.
T Consensus 88 ~~V~d~d~~~~d~~lG~~~i~L~~l~ 113 (128)
T cd08388 88 FAVLSFDRYSRDDVIGEVVCPLAGAD 113 (128)
T ss_pred EEEEEcCCCCCCceeEEEEEeccccC
Confidence 99999998888999999999999984
No 90
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.48 E-value=6e-13 Score=121.19 Aligned_cols=113 Identities=20% Similarity=0.308 Sum_probs=87.4
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+. .....||+++.++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~------~~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKA------DSSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCC------CCCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 58999999999963 234567899999986432 1345799999999999999999999877656789999999
Q ss_pred ccCCCCCCccEEEEEECCccCC---cc---EEEEccCCCCCcccCeEEEEEEEE
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~---Gy---R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
++..+++++||++.++|+.+.. |. +|++|.. . +.|.+++.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~------g~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-Q------GRLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-C------CeEEEEEEE
Confidence 9988889999999999987532 32 5778753 3 456555554
No 91
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.48 E-value=7.3e-14 Score=129.31 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=88.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
.+.|+|+|++|++|+. .+..+..||||+|.+.+......+.||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~~ 87 (136)
T cd08405 14 ANRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLII 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEEE
Confidence 3569999999999953 234567899999998543233346789999999999999999999864433 57999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
.|||.+..+++++||++.+++.....+.+ |..|+...++++
T Consensus 88 ~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 88 TVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 99999988889999999999998755444 457777766665
No 92
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.47 E-value=2.5e-13 Score=121.40 Aligned_cols=98 Identities=20% Similarity=0.175 Sum_probs=82.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC----ccEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe----la~Lr 551 (605)
..|+|+|+.|++|+ .+.+||||+|.+.+ .+++|++++++.||.|||+|.|.+..+. -+.|.
T Consensus 4 ~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l~ 68 (111)
T cd04011 4 FQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKIIK 68 (111)
T ss_pred EEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeEE
Confidence 46899999999984 24579999999865 4678999999999999999999986553 25799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc------EEEEccCC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI------RAVPLHDR 588 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy------R~IpL~d~ 588 (605)
|.|||++..+++++||++.++|+.+..+. +|+||.|+
T Consensus 69 i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 69 ISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 99999998888999999999999996552 47788764
No 93
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.47 E-value=5.3e-13 Score=120.23 Aligned_cols=115 Identities=25% Similarity=0.362 Sum_probs=89.9
Q ss_pred eEEEEEEeccccccCCCCCcc--CCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHF--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~--d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.|+|+|++|++|+.. +... ...+.+||||+|.+.+ ..++|++++++.||+|||+|.|.+..+....|.|.|
T Consensus 2 ~l~v~v~~a~~L~~~--d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v 74 (121)
T cd08391 2 VLRIHVIEAQDLVAK--DKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIEL 74 (121)
T ss_pred eEEEEEEEccCCccc--ccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEE
Confidence 589999999999631 1000 0124689999999854 578999999999999999999998765567899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
||++.. ++++||++.+++..+..+ -.|++|.+. ..+.|.++++|
T Consensus 75 ~d~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 75 FDEDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred EecCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 999977 789999999999988644 267898764 34567777765
No 94
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.47 E-value=3.1e-13 Score=124.24 Aligned_cols=93 Identities=29% Similarity=0.375 Sum_probs=78.1
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEee-ecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v-~~pela~Lrf~ 553 (605)
..+|+|+|++|++|+. +..+.+||||+|.+.| .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 3679999999999952 2346789999999854 378999999999999999999974 34456789999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
|||+|..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999988899999999999966544
No 95
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.46 E-value=2.7e-13 Score=123.41 Aligned_cols=108 Identities=27% Similarity=0.329 Sum_probs=88.7
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCC----ccEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 551 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pe----la~Lr 551 (605)
+|+|+|++|++|+. .+..+.+||||+|.+.+ ..+++|+++.+ +.||.|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~------~~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKN------VNLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCC------CCcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 48999999999963 23356789999999865 35678998865 699999999999998774 47899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc--------EEEEccCCCCCccc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI--------RAVPLHDRKGERYK 594 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy--------R~IpL~d~~g~~l~ 594 (605)
|.|||++..+.+++||++.+||..+..+. .+.+|.+++|++.+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 99999998777999999999999987554 35799998888754
No 96
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.46 E-value=8.3e-13 Score=121.05 Aligned_cols=114 Identities=29% Similarity=0.407 Sum_probs=91.2
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|+|+|++|++|+. .+..+..||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~------~d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIA------KDKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcC------CCCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 58999999999963 23456789999999732 467899999999999999999988654 3579999999
Q ss_pred ccCC-----------CCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEE
Q 007399 557 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 602 (605)
Q Consensus 557 ~D~~-----------~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i 602 (605)
+|.. +.+++||++.+++..+..+- .|.+|....+.....+.|.++|
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 9842 46899999999999886554 5778887666656677888775
No 97
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.46 E-value=8.3e-13 Score=120.23 Aligned_cols=117 Identities=18% Similarity=0.262 Sum_probs=88.7
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|+.|.+|+.. . ...+..||||.|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~---~--~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPR---S--GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCC---C--CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 78999999999631 1 1134679999999843 2457899999999999999999998643 36899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+..+++++||.+.++++.+..| -.|.||.-.....-..+.|.+.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSEVQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCcccEEEEEEEEC
Confidence 9888899999999999999754 3577776432221235777766654
No 98
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.46 E-value=3.8e-13 Score=124.30 Aligned_cols=96 Identities=26% Similarity=0.470 Sum_probs=79.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC--CcceeeccccCCCCCCeeccEEEEeeecC----CccE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELAL 549 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~--D~~k~kTkvv~nn~NPvWNEtf~F~v~~p----ela~ 549 (605)
..|+|+|++|++|+. .+..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ....
T Consensus 16 ~~L~V~Vi~A~~L~~------~~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~~ 89 (133)
T cd04009 16 QSLRVEILNARNLLP------LDSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGAL 89 (133)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCCE
Confidence 469999999999963 23346789999999875332 24578999999999999999999998642 2468
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 550 LRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 550 Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.|.|||++..+++++||++.++|+.|.
T Consensus 90 l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 90 LLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 9999999998888999999999999986
No 99
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.45 E-value=6.8e-14 Score=118.84 Aligned_cols=81 Identities=31% Similarity=0.506 Sum_probs=68.1
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCCCCCCC-
Q 007399 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSP- 103 (605)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~- 103 (605)
||..||.+|+++ +.||.++|++||+++|++..++.++|.+||.+|+... ....+..||++||++||+|+.|.+++|
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~~ 78 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDPE 78 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-HH
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCChH
Confidence 799999999986 9999999999999999998889999999999998532 223457899999999999999999987
Q ss_pred CCCcc
Q 007399 104 TPVVH 108 (605)
Q Consensus 104 ~~~v~ 108 (605)
+..||
T Consensus 79 ~~~Vy 83 (83)
T PF09279_consen 79 HLQVY 83 (83)
T ss_dssp HHSS-
T ss_pred hCCcC
Confidence 33443
No 100
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.45 E-value=4.6e-13 Score=122.38 Aligned_cols=101 Identities=22% Similarity=0.232 Sum_probs=80.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCC--ccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pe--la~Lrf 552 (605)
..|.|+|+.|++|+. .+..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|+|
T Consensus 16 ~~L~V~Vi~a~nL~~------~~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L~~ 86 (124)
T cd08389 16 RKLTVTVIRAQDIPT------KDRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMALRF 86 (124)
T ss_pred CEEEEEEEEecCCCc------hhcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEEEE
Confidence 469999999999964 22345679999987754 3346789999887 999999999998 55433 357999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCcc---EEEEc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
.|+|++..+++++||++.+||+.+..+- .|++|
T Consensus 87 ~V~~~~~~~~~~~lG~~~i~L~~l~~~~~~~~w~~L 122 (124)
T cd08389 87 RLYGVERMRKERLIGEKVVPLSQLNLEGETTVWLTL 122 (124)
T ss_pred EEEECCCcccCceEEEEEEeccccCCCCCceEEEeC
Confidence 9999998888999999999999997652 45555
No 101
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.45 E-value=8e-13 Score=120.11 Aligned_cols=115 Identities=18% Similarity=0.224 Sum_probs=88.6
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|+.|++|+. .+..+..||||+|.+.+ ....||+++.++.||+|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPA------KDITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcC------CCCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 7899999999853 23456789999999854 2346899999999999999999998543 46899999999
Q ss_pred cCCCCCCccEEEEEECCccCCc----cEEEEccCCCCCcccCeEEEEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHFE 603 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~G----yR~IpL~d~~g~~l~~atLlv~i~ 603 (605)
+..++++++|++.+++..+..+ -.|++|....+..-..+.|.+.+.
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~~ 120 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLELS 120 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEEE
Confidence 9888899999999999887643 358899653322223456766553
No 102
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.45 E-value=1e-12 Score=121.76 Aligned_cols=115 Identities=23% Similarity=0.413 Sum_probs=88.9
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-C--------Cc
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 547 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-p--------el 547 (605)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 48999999999963 24456789999999854 57789999999999999999997532 1 12
Q ss_pred cEEEEEEEeccCCCCCCccEEEEE-ECCccCC---c---cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 548 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ---G---IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 548 a~Lrf~V~D~D~~~~ddflGq~~l-pL~sLr~---G---yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
..|.|.|||+|..+++++||++.+ |+..++. + -+|.+|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 568999999998888999999986 6666642 2 37889973 333 356899988874
No 103
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.44 E-value=7.7e-13 Score=120.32 Aligned_cols=103 Identities=21% Similarity=0.244 Sum_probs=81.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC---CccEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---ELALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p---ela~Lr 551 (605)
...|.|+|++|++|+. .+..+..||||+|.+.+ .+..+.||++++++.||+|||+|.|.+... ....|.
T Consensus 15 ~~~L~v~v~~a~~L~~------~d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l~ 86 (125)
T cd08386 15 ESTLTLKILKAVELPA------KDFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVLY 86 (125)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEEE
Confidence 3569999999999963 23345689999999843 334567999999999999999999975322 235799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 585 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL 585 (605)
|.|||+|..+++++||++.++|+.+..|- +|.+|
T Consensus 87 ~~v~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~l 123 (125)
T cd08386 87 LQVLDYDRFSRNDPIGEVSLPLNKVDLTEEQTFWKDL 123 (125)
T ss_pred EEEEeCCCCcCCcEeeEEEEecccccCCCCcceEEec
Confidence 99999998888999999999999987653 34554
No 104
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.44 E-value=2.6e-12 Score=117.58 Aligned_cols=114 Identities=21% Similarity=0.281 Sum_probs=89.5
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|+|+|++|++|.. .+..+.+||||+|.+.+ .+.||++++++.||+|||.|.|.+..+ -..|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 358999999999853 24457799999998754 467999999999999999999987654 467999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-cEEEEccC----CCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG-IRAVPLHD----RKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G-yR~IpL~d----~~g~~l~~atLlv~i~f 604 (605)
|++... +++||.+.++++.+..+ +++++|.. .+|+ ..++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~--~~G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGE--VPGTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCC--CCCEEEEEEEE
Confidence 998765 89999999999987544 67889953 3333 34577777654
No 105
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.44 E-value=2.3e-13 Score=124.83 Aligned_cols=112 Identities=20% Similarity=0.178 Sum_probs=90.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC--ccEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe--la~Lrf~ 553 (605)
..|.|+|++|++|+. .+..+..||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+|.
T Consensus 14 ~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~~~ 87 (134)
T cd00276 14 ERLTVVVLKARNLPP------SDGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLVIT 87 (134)
T ss_pred CEEEEEEEEeeCCCC------ccCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEEEE
Confidence 569999999999963 23346789999999976544445779999999999999999999987654 3689999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccE-EEEccCCCCCcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 593 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR-~IpL~d~~g~~l 593 (605)
|||.+..+++++||++.++++....+.. |.+|++..|+++
T Consensus 88 v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 88 VVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 9999987789999999999999444443 558888777765
No 106
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.43 E-value=1.5e-12 Score=119.96 Aligned_cols=112 Identities=24% Similarity=0.248 Sum_probs=88.0
Q ss_pred ceEEEEEEeccccccCCCCCccC--------CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFD--------AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL 547 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d--------~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel 547 (605)
+.|+|+|+.|++|... ... ..+..||||+|.+.+ ....+|+++.++.||.|||+|+|.+. +.
T Consensus 4 g~l~V~v~~a~~L~~~----d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~ 73 (132)
T cd04014 4 GTLKIKICEAVDLKPT----DWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NG 73 (132)
T ss_pred eEEEEEEEEecCCCCC----CchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CC
Confidence 4699999999999531 110 124689999999854 23468999888999999999999986 45
Q ss_pred cEEEEEEEeccCCCCCCccEEEEEECCccCC-----ccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 548 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 548 a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~-----GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
+.|.|.|+|.+..+.++++|++.++|+.+.. +-.|++|. +.+.|.|++.+
T Consensus 74 ~~l~~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-------~~G~l~l~~~~ 128 (132)
T cd04014 74 RNLELTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-------PQGKLHVKIEL 128 (132)
T ss_pred CEEEEEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-------CCcEEEEEEEE
Confidence 7899999999887788999999999999876 25688886 24577777765
No 107
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.43 E-value=8.1e-13 Score=119.72 Aligned_cols=104 Identities=19% Similarity=0.223 Sum_probs=83.1
Q ss_pred cceEEEEEEeccccccCCCCCccC-CCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d-~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
...|.|+|++|++|+. .+ ..+..||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~L~V~v~~a~~L~~------~~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l~ 84 (123)
T cd08390 13 EEQLTVSLIKARNLPP------RTKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTLR 84 (123)
T ss_pred CCEEEEEEEEecCCCC------ccCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEEE
Confidence 3569999999999963 12 345689999999853 33456789999999999999999999876543 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc---EEEEcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~ 586 (605)
|.|||.+..+++++||++.++|+.+.... .|.||.
T Consensus 85 i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L~ 122 (123)
T cd08390 85 LSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDLE 122 (123)
T ss_pred EEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeCC
Confidence 99999998778999999999999987543 566663
No 108
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.43 E-value=7.1e-13 Score=120.09 Aligned_cols=103 Identities=21% Similarity=0.247 Sum_probs=82.3
Q ss_pred EEeccccccCCCCCccCCCCCCCceEEEEEecCC--CCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccC
Q 007399 482 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 559 (605)
Q Consensus 482 Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p--~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~ 559 (605)
.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 478888853 2445678999999998754 23346799999999999999999999877777889999999996
Q ss_pred ----CCCCCccEEEEEECCccCCcc---EEEEccCCCC
Q 007399 560 ----SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 590 (605)
Q Consensus 560 ----~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g 590 (605)
.+++++||++.++++.|..+- .+.+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 678999999999999987442 3567755444
No 109
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.42 E-value=5.9e-13 Score=123.83 Aligned_cols=98 Identities=24% Similarity=0.304 Sum_probs=79.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf 552 (605)
...|.|+|++|++|+. .+ .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+|
T Consensus 14 ~~~L~V~V~~a~nL~~------~~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~~ 86 (137)
T cd08409 14 LNRLTVVVLRARGLRQ------LD-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLSL 86 (137)
T ss_pred CCeEEEEEEEecCCCc------cc-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEEE
Confidence 3569999999999963 23 456899999998764333346789999999999999999999865444 68999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
.|+|.+..+++++||++.++......|
T Consensus 87 ~V~~~~~~~~~~~lG~v~ig~~~~~~~ 113 (137)
T cd08409 87 SVMQSGGVRKSKLLGRVVLGPFMYARG 113 (137)
T ss_pred EEEeCCCCCCcceEEEEEECCcccCCC
Confidence 999999888899999999997655434
No 110
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.42 E-value=9.8e-13 Score=125.93 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=79.6
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC-Cc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p-el--a~Lr 551 (605)
.+.|.|+|++|++|+. .+..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|.
T Consensus 26 ~g~L~V~Vi~A~nL~~------~d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L~ 99 (162)
T cd04020 26 TGELHVWVKEAKNLPA------LKSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACLE 99 (162)
T ss_pred CceEEEEEEeeeCCCC------CCCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEEE
Confidence 4679999999999964 2334678999999986543445678999999999999999999985432 23 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.|||+|..+++++||++.++++.+.
T Consensus 100 i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 100 LTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEeCCCCCCCceEEEEEEeCCccc
Confidence 99999998888999999999999874
No 111
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.42 E-value=1.1e-12 Score=120.40 Aligned_cols=108 Identities=29% Similarity=0.406 Sum_probs=88.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC-ccEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe-la~Lrf~V 554 (605)
..|+|+|++|++|+. .+..+..||||+|.+.+.+.+..++||+++.++.||.|||+|.|.+..++ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIP------MDPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCC------cCCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 469999999999963 12335689999999987666667889999999999999999999987553 35899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc--cEEEEccCCC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK 589 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G--yR~IpL~d~~ 589 (605)
||++..+.+++||++.++|+.+..+ -.|.+|.+..
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9999877899999999999998643 3578887643
No 112
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.42 E-value=1.9e-12 Score=117.13 Aligned_cols=119 Identities=22% Similarity=0.218 Sum_probs=92.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. . ....+.+||||+|.+.+. ....+|+++.++.||.|||+|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~----~-~~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKG----S-DIIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCc----c-cccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 358999999999962 1 012245799999998652 35678999999999999999999987 44568999999
Q ss_pred eccCCCCCCccEEEEEECCccCCccE---EEEccCCCCCcccCeEEEEEEEEC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|++..+++++||++.++|..+..+.. +.......|++ .++|-|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~--~G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKP--VGELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCcc--ceEEEEEEEeC
Confidence 99988789999999999999875532 22334456665 47888888875
No 113
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.41 E-value=4.1e-12 Score=120.54 Aligned_cols=121 Identities=21% Similarity=0.216 Sum_probs=88.5
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC--------ccE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 549 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe--------la~ 549 (605)
..++|..+.++++. . .+..+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~--~--~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLP--S--GWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccC--C--CcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 45566666654321 1 22334579999999743234456889999999999999999999985442 135
Q ss_pred EEEEEEeccCC-CCCCccEEEEEECCccCCc--c-EEEEccCCCCCcccCeEEEEEEEE
Q 007399 550 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 550 Lrf~V~D~D~~-~~ddflGq~~lpL~sLr~G--y-R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.|.|||++.+ .+|++||++.++|+.+..+ . .+++|++ |...-++.|-|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 99999999875 4699999999999999544 3 4679986 555567788888754
No 114
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.41 E-value=9.2e-13 Score=122.82 Aligned_cols=113 Identities=18% Similarity=0.244 Sum_probs=87.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lr 551 (605)
..+|.|+|+.|++|+. .+..+.+||||+|.+...... ..++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L~ 87 (138)
T cd08408 14 TGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTLM 87 (138)
T ss_pred CCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEEE
Confidence 3569999999999963 234467899999998653222 246799999999999999999999876554 5899
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCc-cE-EEEccCCCCCcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQG-IR-AVPLHDRKGERY 593 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~G-yR-~IpL~d~~g~~l 593 (605)
|.|||.+..+++++||++.+++.....+ .. |-.+++..++++
T Consensus 88 ~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 88 FSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 9999999888899999999999877543 33 335555555543
No 115
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.40 E-value=1.6e-12 Score=118.08 Aligned_cols=99 Identities=24% Similarity=0.379 Sum_probs=80.3
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
...|+|+|++|++|+. .+..+.+||||+|.+.+...+..+.||++++++.||+|||+|.|. +...++ ..|.
T Consensus 14 ~~~L~V~v~~a~~L~~------~~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l~ 87 (123)
T cd04035 14 NSALHCTIIRAKGLKA------MDANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTLR 87 (123)
T ss_pred CCEEEEEEEEeeCCCC------CCCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEEE
Confidence 3569999999999963 233467899999998765555567899999999999999999996 333333 4799
Q ss_pred EEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
|.|||++.. .+++||++.++++.|.++-
T Consensus 88 ~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 88 LLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 999999877 6899999999999998663
No 116
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.38 E-value=2.2e-12 Score=117.85 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=77.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||+|||+|.|.+..++.+.|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999963 244567899999998542 2345788888999999999999998878778999999999
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007399 558 DMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr 577 (605)
|..+++++||++.++|+...
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999999775
No 117
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.36 E-value=8.4e-12 Score=116.27 Aligned_cols=116 Identities=22% Similarity=0.285 Sum_probs=86.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC--------CcceeeccccCCCCCCee-ccEEEEeeecCCcc
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELA 548 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~--------D~~k~kTkvv~nn~NPvW-NEtf~F~v~~pela 548 (605)
++|++++|++|+. +.++.+||||++.+.+... +..++||++++++.||+| ||+|.|.+... .
T Consensus 3 ~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~--~ 73 (137)
T cd08691 3 FSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT--D 73 (137)
T ss_pred EEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--C
Confidence 6899999999842 3457899999999964221 234789999999999999 99999998543 4
Q ss_pred EEEEEEEeccCCCC---CCccEEEEEECCccCCc------cEEEEccCCCCCcccCeEEEEEE
Q 007399 549 LLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG------IRAVPLHDRKGERYKSVKLLMHF 602 (605)
Q Consensus 549 ~Lrf~V~D~D~~~~---ddflGq~~lpL~sLr~G------yR~IpL~d~~g~~l~~atLlv~i 602 (605)
.|.|+|||++..++ +++||++.+||+.|..| ..+.+|.-......-.+.|.++|
T Consensus 74 ~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~~~~~~~~~~~~l~k~~~~s~v~G~~~l~~ 136 (137)
T cd08691 74 VLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLERHAIGDQELSYTLGRRTPTDHVSGQLTFRF 136 (137)
T ss_pred EEEEEEEecCCCCCccCCceEEEEEEEHHHhcccccCCceEEEEECCcCCCCCcEEEEEEEEe
Confidence 79999999875433 69999999999999755 23456654444334445666554
No 118
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.36 E-value=3e-12 Score=120.36 Aligned_cols=91 Identities=30% Similarity=0.434 Sum_probs=77.6
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|+|+|++|++|+. .+. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~------~d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAV------RDF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCC------CCC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 358999999999963 123 5679999999843 578999999999999999999999776 567999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
|+|..++++++|++.+++..+..+
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~ 92 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEA 92 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhh
Confidence 999888899999999999987544
No 119
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.35 E-value=5e-12 Score=117.67 Aligned_cols=104 Identities=29% Similarity=0.348 Sum_probs=84.9
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC------------
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 545 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p------------ 545 (605)
|+|+|+.|++|+. . ..+..||||+|.+.+ +....+++|+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~------~-~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLAL------K-SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCc------c-cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 5799999999953 1 235689999999864 2334678999999999999999999998765
Q ss_pred ---CccEEEEEEEeccCCCCCCccEEEEEECCccCCc---cEEEEccCCC
Q 007399 546 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 589 (605)
Q Consensus 546 ---ela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G---yR~IpL~d~~ 589 (605)
....|+|.|||.+..++++|||++.++|..+..+ .+|.+|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999887899999999999998654 5688887654
No 120
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.33 E-value=5.8e-12 Score=113.84 Aligned_cols=92 Identities=26% Similarity=0.357 Sum_probs=72.2
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|.+|++|. +..||||++++.+......+.||++++++.||+|||+|.|.+.. -..|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 689999999983 24799999988643222457899999999999999999999863 44899999998
Q ss_pred -------cCCCCCCccEEEEEECCc--cC-CccEE
Q 007399 558 -------DMSEKDDFGGQTCLPVSE--LK-QGIRA 582 (605)
Q Consensus 558 -------D~~~~ddflGq~~lpL~s--Lr-~GyR~ 582 (605)
|..+.++++|.+.+.|+. +. .|++-
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~ 102 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQE 102 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeE
Confidence 455779999888888763 43 46653
No 121
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.32 E-value=9e-12 Score=113.29 Aligned_cols=92 Identities=25% Similarity=0.418 Sum_probs=77.5
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|.|+|++|++++. .+..+.+||||+|.+.+ ..+.+|+++.++.||.|||+|.|.+..+. ..|+|.|||
T Consensus 2 ~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~d 70 (120)
T cd04045 2 VLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVMD 70 (120)
T ss_pred eEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEEE
Confidence 58999999999853 23456789999999843 24678999989999999999999887653 579999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G 579 (605)
++..+++++||++.+++..+..+
T Consensus 71 ~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 71 YEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred CCCCCCCCeeeEEEEeHHHhhCC
Confidence 99888899999999999998765
No 122
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.31 E-value=9.4e-12 Score=113.21 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=75.7
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCC-CCCCeeccEEEEeeecCC---ccEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLRI 552 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~n-n~NPvWNEtf~F~v~~pe---la~Lrf 552 (605)
.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||+|||+|.|.+..+. ...|.|
T Consensus 2 ~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~v 70 (124)
T cd04049 2 TLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLIL 70 (124)
T ss_pred eEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEEE
Confidence 58999999999953 23446789999999843 4568888875 799999999999998773 467999
Q ss_pred EEEeccCCCCCCccEEEEEECCccCC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQ 578 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~ 578 (605)
.|||.+..+++++||++.+++..+..
T Consensus 71 ~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 71 RIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEECccCCCCCeEEEEEEEhHHhhh
Confidence 99999988889999999999999853
No 123
>PLN03008 Phospholipase D delta
Probab=99.30 E-value=1.7e-11 Score=140.12 Aligned_cols=99 Identities=22% Similarity=0.445 Sum_probs=86.4
Q ss_pred CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 501 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 501 s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. +.|.|+|+|+|.++ +++||++.|||..|.+|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4579999999943 34569999999999999999999998764 58999999999887 699999999999999996
Q ss_pred ---EEEEccCCCCCccc-CeEEEEEEEEC
Q 007399 581 ---RAVPLHDRKGERYK-SVKLLMHFEFI 605 (605)
Q Consensus 581 ---R~IpL~d~~g~~l~-~atLlv~i~f~ 605 (605)
+|++|.+..|+++. ++.|.|.++|+
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 68999999999984 47999999884
No 124
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.29 E-value=1.5e-11 Score=112.50 Aligned_cols=93 Identities=22% Similarity=0.285 Sum_probs=75.1
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEe
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 556 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D 556 (605)
.|.|+|+.|++++. . +..||||+|.+.+ .+.+|++++++ ||.|||+|.|.+..++.. |.|.|||
T Consensus 3 ~L~V~Vv~Ar~L~~------~---~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~d 66 (127)
T cd08394 3 LLCVLVKKAKLDGA------P---DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELWN 66 (127)
T ss_pred eEEEEEEEeeCCCC------C---CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEEe
Confidence 59999999999842 1 2348999999843 57789988775 999999999999765544 9999999
Q ss_pred ccCCCCCCccEEEEEECCccCCc-----cEEEEcc
Q 007399 557 YDMSEKDDFGGQTCLPVSELKQG-----IRAVPLH 586 (605)
Q Consensus 557 ~D~~~~ddflGq~~lpL~sLr~G-----yR~IpL~ 586 (605)
+|.. .||++|++.+||+.+..+ -.|+||.
T Consensus 67 kd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 67 KGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred CCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 9965 699999999999998643 3567774
No 125
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.29 E-value=3.1e-11 Score=113.50 Aligned_cols=115 Identities=17% Similarity=0.313 Sum_probs=92.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
...|.|.|+.|++|+. ..+|||+|.+.| ....||+++.++.||.|+|+|.|....+ ...|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~-----------~~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPP-----------KKRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCC-----------cCCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 3569999999999963 126899999976 3345999999999999999999975443 56689999
Q ss_pred EeccC-CC---CCCccEEEEEECCccCCcc---EEEEccCCCCCc--------ccCeEEEEEEEEC
Q 007399 555 HEYDM-SE---KDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEFI 605 (605)
Q Consensus 555 ~D~D~-~~---~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~--------l~~atLlv~i~f~ 605 (605)
+..+. .+ ++++||.+.||+..+..|. +|.||.+.+|.+ -++++|-|+++|.
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~ 139 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQ 139 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEE
Confidence 65442 21 4789999999999998874 799999999997 4668999999873
No 126
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.28 E-value=1.9e-11 Score=115.92 Aligned_cols=102 Identities=28% Similarity=0.403 Sum_probs=79.2
Q ss_pred CcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC------------------------CcceeeccccCCC
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA------------------------DTVMKKTKTLEDN 529 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~------------------------D~~k~kTkvv~nn 529 (605)
....|+|+|++|++|+. .+..+.+||||+|.+.+... ....++|+++.++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 34679999999999853 34456789999998853211 0124689999999
Q ss_pred CCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC-Ccc-EEEEc
Q 007399 530 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK-QGI-RAVPL 585 (605)
Q Consensus 530 ~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr-~Gy-R~IpL 585 (605)
.||.|||+|.|.+..+....|.|.|||++ +++||++.++++.+. .|. .|.+|
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~~~~~d~W~~L 153 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLPSCGLDSWFKL 153 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhCCCCCCCeEeC
Confidence 99999999999997655678999999987 789999999999987 332 34454
No 127
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.28 E-value=3.1e-11 Score=110.48 Aligned_cols=115 Identities=22% Similarity=0.279 Sum_probs=86.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.+|.|+|++|+.+. .+..+.+||||+|.+.+. .+.+|+++.++.||+|||+|.|.+. +...|.|.||
T Consensus 2 ~~L~V~i~~a~l~~-------~~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKS-------NSKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCC-------CCcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 35899999998332 122467899999998542 3678999999999999999999874 3468999999
Q ss_pred eccCCCCCCccEEEEEECCccCCc-------c-EEEEccCCCC-CcccCeEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQG-------I-RAVPLHDRKG-ERYKSVKLLMHFE 603 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~G-------y-R~IpL~d~~g-~~l~~atLlv~i~ 603 (605)
|++..+.+++||++.++|+.+..+ + -+++|..+.. .....+.|.+.++
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 125 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVILD 125 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEeC
Confidence 999888899999999999988632 2 2577764441 2233457776653
No 128
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.27 E-value=1.6e-11 Score=102.27 Aligned_cols=85 Identities=38% Similarity=0.536 Sum_probs=73.4
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|++|++|+. .+..+.++|||+|.+.+.+. .+++|+++.++.+|.|||+|.|.+..++.+.|.|.|||.
T Consensus 1 L~v~I~~a~~L~~------~~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPS------KDSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSS------SSTTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCC------cccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 7899999999964 12345689999999987543 568999999999999999999999888888899999999
Q ss_pred cCCCCCCccEEEE
Q 007399 558 DMSEKDDFGGQTC 570 (605)
Q Consensus 558 D~~~~ddflGq~~ 570 (605)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
No 129
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=99.27 E-value=6.4e-11 Score=106.09 Aligned_cols=113 Identities=21% Similarity=0.304 Sum_probs=84.0
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 555 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~ 555 (605)
|+|+|+.|.+|+. . +.+||||.|.+.+ ...++|+++.+ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~----~-----~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPS----K-----GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCc----C-----CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 7899999999953 1 4579999999854 23568999988 999999999999876554 45777888
Q ss_pred eccCCCCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEEE
Q 007399 556 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~f 604 (605)
|.+...++.++|.+.+.......+. .|.+|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8776555666776555554444443 478998776655556788888765
No 130
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=4.6e-12 Score=133.34 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=85.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 554 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~V 554 (605)
..|+|+|..|.+|.. .|.++.+||||++.+...+....|+||++++.++||+|||+|+|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 458999999999842 456688999999999988888889999999999999999999999976554 5799999
Q ss_pred EeccCCCCCCccEEEEEECCccC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr 577 (605)
||+|..+++||+|...+.+++|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999998875
No 131
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.24 E-value=4.8e-11 Score=106.81 Aligned_cols=97 Identities=18% Similarity=0.252 Sum_probs=78.8
Q ss_pred CCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 498 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 498 d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
...+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|++.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 4456789999999854 2457899988899999999999998766557799999999987 7999999999999873
Q ss_pred -C---ccEEEEccCCCCCcccCeEEEEEEEE
Q 007399 578 -Q---GIRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 578 -~---GyR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
. +.+|.+|.+ .+.+.|.++++|
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~ 108 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALW 108 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEE
Confidence 2 357889875 235788888877
No 132
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.23 E-value=4.7e-11 Score=115.90 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=84.6
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc------ccchHHHHHHHHhhhhhccC
Q 007399 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (605)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 195 (605)
.+|+-|-...+ +.|..+|..||..|||.||+|||...| +.|+|.|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888866555 889999999999999999999999876 479999999986 56889999999999999 88
Q ss_pred CCceEEEeccCCCH----HHHHHHHHHHHHHhh
Q 007399 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (605)
Q Consensus 196 ~yPvIlSlE~Hc~~----~qQ~~ma~~~~~i~G 224 (605)
.+|++|.||.+++. .++..+++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 666777777776654
No 133
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.20 E-value=8e-11 Score=104.71 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=72.3
Q ss_pred EEEEeccccccCCCCCccCCCCCCCceEEEEEecCC-CCcceeeccccCCCCCCeeccEEEEeee---cCC-ccEEEEEE
Q 007399 480 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEV 554 (605)
Q Consensus 480 V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p-~D~~k~kTkvv~nn~NPvWNEtf~F~v~---~pe-la~Lrf~V 554 (605)
+-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|| +|.|.+. ..+ ...|+|.|
T Consensus 4 ~~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V 76 (110)
T cd04047 4 ELQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEV 76 (110)
T ss_pred EEEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEE
Confidence 34568888853 3445678999999986532 12346799999999999999 7777643 222 46899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCc
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
||++..+++++||++.++++.|.++
T Consensus 77 ~d~d~~~~d~~iG~~~~~l~~l~~~ 101 (110)
T cd04047 77 YDYDSSGKHDLIGEFETTLDELLKS 101 (110)
T ss_pred EEeCCCCCCcEEEEEEEEHHHHhcC
Confidence 9999988899999999999999855
No 134
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.17 E-value=1.7e-10 Score=126.24 Aligned_cols=121 Identities=23% Similarity=0.292 Sum_probs=93.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~ 553 (605)
..|+|+|+.|.+|+.. +..+..||||++.+.. ....+.+|+++++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~llP--dk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLLP--DKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEcC--CCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 4599999999999741 2234689999999864 44678899999999999999999999876655 589999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcccC-eEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l~~-atLlv~i~f 604 (605)
|||+|.++++++||++.+||..+.... .|.+|....-..-.. +-|++.+.+
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887655 466665432222111 466665544
No 135
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.12 E-value=4.4e-10 Score=95.57 Aligned_cols=99 Identities=38% Similarity=0.543 Sum_probs=81.3
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|+|+.|+++.. .......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~------~~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPK------KDKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCC------CCCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 7899999999853 1222457999999997532 3467899998889999999999998776567899999999
Q ss_pred cCCCCCCccEEEEEECCccCCccEEEE
Q 007399 558 DMSEKDDFGGQTCLPVSELKQGIRAVP 584 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr~GyR~Ip 584 (605)
+..+.+.++|.+.+|+..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 877678999999999999999987654
No 136
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.03 E-value=8.8e-10 Score=136.61 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=92.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc-cEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel-a~Lrf~ 553 (605)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||+|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 477999999999984 2245689999999853 236689999999999999999999987764 469999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccE---EEEccC---CCCCcccCeEEEEEEEE
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD---RKGERYKSVKLLMHFEF 604 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d---~~g~~l~~atLlv~i~f 604 (605)
|||+|.++ ++.+|.+.+++..+-.+-+ +.+|.+ ++|++ -+|-++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999886 5589999999999875533 678885 45553 378899987
No 137
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=98.99 E-value=2.6e-09 Score=98.92 Aligned_cols=97 Identities=24% Similarity=0.273 Sum_probs=78.6
Q ss_pred EEEEEEeccccccCCCCCccCCCC--CCCceEEEEEecCCCCcceeeccccCCCCC--CeeccEEEEeeec---------
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYS--PPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV--------- 544 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s--~~DPyV~V~i~G~p~D~~k~kTkvv~nn~N--PvWNEtf~F~v~~--------- 544 (605)
|+|.|..+++++.. . .+..+ .+||||++.+.|. ...+++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~--~--~~~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~ 75 (133)
T cd08374 2 LRVIVWNTRDVLND--D--TNITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVV 75 (133)
T ss_pred EEEEEEECcCCccc--c--cccCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEE
Confidence 78999999997542 1 11123 4899999999874 456789999999988 9999999998765
Q ss_pred ------------CCc--cEEEEEEEeccCCCCCCccEEEEEECCccCCcc
Q 007399 545 ------------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 580 (605)
Q Consensus 545 ------------pel--a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy 580 (605)
.++ ..|.++|||.|..+++++||+..++|..|.+|.
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 76 IKKEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred EeeccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 222 579999999999999999999999999987764
No 138
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.93 E-value=1.8e-09 Score=118.08 Aligned_cols=116 Identities=25% Similarity=0.390 Sum_probs=88.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
.+++++|++||+|.. .|.-+.+||||.+.+. ..|+||++|..++||+|||.|+|.+.+. -..|+++||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 458999999999964 2445778999999975 3688999999999999999999999865 356899999
Q ss_pred eccCC-----------CCCCccEEEEEECCccCCcc-EEEEccCCCCCcccCeEEEEEEE
Q 007399 556 EYDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFE 603 (605)
Q Consensus 556 D~D~~-----------~~ddflGq~~lpL~sLr~Gy-R~IpL~d~~g~~l~~atLlv~i~ 603 (605)
|+|.. ..+||+||..|.+..|.-.. -|..|--...+..-.+-+-+||.
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsgemdvwynlekrtdksavsgairlhis 422 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHIS 422 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccchhhhcchhhccchhhccceEEEEEE
Confidence 98864 35899999999998885332 35566555555554445555553
No 139
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=98.90 E-value=1e-08 Score=86.38 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=74.3
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|.|.|++|++++.. ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 47899999988531 2235689999999865 3567899998889999999999998764556799999998
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007399 558 DMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr 577 (605)
+..+...++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87766899999999999986
No 140
>PLN02270 phospholipase D alpha
Probab=98.87 E-value=1.1e-08 Score=117.27 Aligned_cols=125 Identities=18% Similarity=0.271 Sum_probs=99.5
Q ss_pred cceEEEEEEeccccccC-C-----------CCCccCCCCCCCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEe
Q 007399 475 KKTLKVTVYMGEGWYYD-F-----------PHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFP 541 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~-~-----------~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~ 541 (605)
.++|.|+|+.|.+|+.. . ..+-......+||||.|.+.+ ..-.||+++.|. .||+|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 35699999999988631 0 000001113569999999976 345699999886 699999999998
Q ss_pred eecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc---EEEEccCCCCCcc-cCeEEEEEEEEC
Q 007399 542 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERY-KSVKLLMHFEFI 605 (605)
Q Consensus 542 v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy---R~IpL~d~~g~~l-~~atLlv~i~f~ 605 (605)
+..+ .+-|.|+|+|.|..+ ..+||.+.+|+..|-.|- +|+|+.+.+|+++ +++.|-|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8766 478999999999887 679999999999999884 7899999999999 458999999985
No 141
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.87 E-value=6.8e-09 Score=107.87 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=108.6
Q ss_pred CCcccceeeeccCcccccCCC--CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhh
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKE 189 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Q--l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~ 189 (605)
+.||++.-|-.|||++-...- -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 779999999999998754332 44566677788999999999999999865 24689999976555 899999999999
Q ss_pred hhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecC
Q 007399 190 YAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (605)
Q Consensus 190 ~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (605)
+--..-.-.|||+|..+++... -.+-+.++|.+.+..+... ....+|+..++||||++-..
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8877777889999999998764 3334566666666655432 24789999999999999854
No 142
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.84 E-value=9.3e-09 Score=112.63 Aligned_cols=150 Identities=20% Similarity=0.219 Sum_probs=104.0
Q ss_pred ccccccCCceeeeecCCcccCCCCCCCccC---C------C-C-C-------CCCcceEEEEEEeccccccCCCCCccCC
Q 007399 438 HGMFRANGGCGYVKKPNFLLQTGPHNEVFD---P------K-V-K-------LPAKKTLKVTVYMGEGWYYDFPHTHFDA 499 (605)
Q Consensus 438 ~g~F~~NG~cGYVLKP~~lr~~~~~~~~f~---p------~-~-~-------~p~~~~L~V~Visaq~L~~~~~~~~~d~ 499 (605)
..+|..|+--|.|.=|-...+........- | . . . +|....|+|.|+.|++|.. .+.
T Consensus 242 ~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y~p~~g~ltv~v~kar~L~~------~~~ 315 (421)
T KOG1028|consen 242 FDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCYLPTAGRLTVVVIKARNLKS------MDV 315 (421)
T ss_pred cCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEeecCCCeEEEEEEEecCCCc------ccC
Confidence 478999988899888722222111000000 0 0 0 1 2445789999999999953 344
Q ss_pred CCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 500 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 500 ~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
.+..||||++.+........|+||.+.+++.||+|||+|.|.|....+ +.|.++|||+|..+++++||++.+...+-.
T Consensus 316 ~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~vp~~~l~~~~l~l~V~d~d~~~~~~~iG~~~lG~~~~~ 395 (421)
T KOG1028|consen 316 GGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFDVPPEQLAEVSLELTVWDHDTLGSNDLIGRCILGSDSTG 395 (421)
T ss_pred CCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEeCCHHHhheeEEEEEEEEcccccccceeeEEEecCCCCc
Confidence 567899999998754444567789999999999999999998875554 569999999999999999999888877633
Q ss_pred CccEEE-EccCCCCCcc
Q 007399 578 QGIRAV-PLHDRKGERY 593 (605)
Q Consensus 578 ~GyR~I-pL~d~~g~~l 593 (605)
.|-+|+ .+.+.-++++
T Consensus 396 ~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 396 EEVRHWQEMLNSPRKPV 412 (421)
T ss_pred hHHHHHHHHHhCccCce
Confidence 333433 4444444443
No 143
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.83 E-value=1.4e-08 Score=105.03 Aligned_cols=137 Identities=18% Similarity=0.283 Sum_probs=104.1
Q ss_pred CCCcccceeeeccCcccccCCCC--CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc-cchHHHHHHHH
Q 007399 111 MTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRSI 187 (605)
Q Consensus 111 M~~PLs~YfI~SSHNTYL~g~Ql--~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts-~i~f~dvi~aI 187 (605)
-++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++... +...++||.-... ..+|.|+++.|
T Consensus 8 ~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~i 85 (270)
T cd08588 8 CDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLREV 85 (270)
T ss_pred CCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHHH
Confidence 47899999999999999987653 3344444568889999999999999853 3588999865443 78999999999
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHH-HHhhccccCCCCCC--CCCCCChhhcc--CcEEE
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT-QTLGEILFTPGSEC--LKEFPSPESLK--RRIII 250 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~-~i~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIli 250 (605)
+++.=..-.=-|||.||++.+.... ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||
T Consensus 86 ~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlv 152 (270)
T cd08588 86 VDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLL 152 (270)
T ss_pred HHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEE
Confidence 9987433333389999999987664 3444443 68999999886543 46899999998 55444
No 144
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.74 E-value=3.5e-08 Score=115.15 Aligned_cols=105 Identities=26% Similarity=0.398 Sum_probs=90.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.+.|+|.+++|++|+. .+..+-.||||++.+-+ +.-++|++++.++||+|||++...|.+.....+.+.|
T Consensus 1039 sG~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v 1108 (1227)
T COG5038 1039 SGYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINV 1108 (1227)
T ss_pred cCcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEE
Confidence 3569999999999964 46667789999999865 3468999999999999999999999888778899999
Q ss_pred EeccCCCCCCccEEEEEECCccCCccE---EEEccCCC
Q 007399 555 HEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRK 589 (605)
Q Consensus 555 ~D~D~~~~ddflGq~~lpL~sLr~GyR---~IpL~d~~ 589 (605)
+|+|...+++.||++.++|..|.+|.. .|||-.+.
T Consensus 1109 ~Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1109 NDWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred eecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 999999999999999999999998853 47776554
No 145
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.40 E-value=1.2e-07 Score=105.51 Aligned_cols=95 Identities=24% Similarity=0.379 Sum_probs=77.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCC--CcceeeccccCCCCCCeeccEEEEeeec----CCccE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELAL 549 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~--D~~k~kTkvv~nn~NPvWNEtf~F~v~~----pela~ 549 (605)
.+|.|.|+-|.++.. .|.++.+||||.|++..... -...+||+++..++||+|+|+|+|.|.. .+.|+
T Consensus 947 q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~Am 1020 (1103)
T KOG1328|consen 947 QTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETAM 1020 (1103)
T ss_pred cchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccce
Confidence 557888888887742 46678899999999864211 1235689999999999999999999863 34689
Q ss_pred EEEEEEeccCCCCCCccEEEEEECCcc
Q 007399 550 LRIEVHEYDMSEKDDFGGQTCLPVSEL 576 (605)
Q Consensus 550 Lrf~V~D~D~~~~ddflGq~~lpL~sL 576 (605)
|.|+|.|+|..+.+||.|++.+.|+.+
T Consensus 1021 ~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1021 LHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred EEEEeeccceecccccchHHHHhhCCC
Confidence 999999999999999999999988877
No 146
>PLN02352 phospholipase D epsilon
Probab=98.33 E-value=2.9e-06 Score=97.59 Aligned_cols=117 Identities=19% Similarity=0.275 Sum_probs=88.4
Q ss_pred cceEEEEEEeccccccCCCC-CccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPH-THFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~-~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
.++|.++|..|.-+...+.. .... ...||||.|.+.+ ..-.|| .|.-||+|||+|...+..+-.+.|.|+
T Consensus 9 hg~l~~~i~~~~~~~~~~~~~~~~~--~~~~~y~tv~~~~----~~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~ 79 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPFNCIFL--NGKATYVTIKIGN----KKVAKT---SHEYDRVWNQTFQILCAHPLDSTITIT 79 (758)
T ss_pred ccceEEEEEEeeehhhccccccccc--CCCCceEEEEeCC----cEEecC---CCCCCCccccceeEEeeeecCCcEEEE
Confidence 46799999998733211110 0011 1239999999865 234467 455799999999998877644679999
Q ss_pred EEeccCCCCCCccEEEEEECCccCCcc----EEEEccCCCCCcccCeEEEEEEEEC
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~Gy----R~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
|+|. ..+||.+.+|+..|-.|- +|+|+.+.+|+++.++.|-|+++|+
T Consensus 80 vk~~-----~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 80 LKTK-----CSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred EecC-----CeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 9982 679999999999998883 6899999999999889999999984
No 147
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=97.96 E-value=2e-05 Score=69.74 Aligned_cols=87 Identities=18% Similarity=0.208 Sum_probs=62.5
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEEec
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 557 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~ 557 (605)
|+|+|.+++++... ......+.+||||.|.+.+ ..+.||++. -||.|||+|.|.|. ...-+.+.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 67899999988421 1011346689999999854 457888874 78999999999994 345789999998
Q ss_pred cCCCCCCccEEEEEECCccC
Q 007399 558 DMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 558 D~~~~ddflGq~~lpL~sLr 577 (605)
.. ...-.+|..-++++.|-
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~ 87 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIA 87 (109)
T ss_pred CC-CeecceeeehhhHHHHH
Confidence 63 23456777777776653
No 148
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=97.96 E-value=1.8e-05 Score=93.10 Aligned_cols=93 Identities=23% Similarity=0.317 Sum_probs=73.1
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
+.|.|+|.+|.++.. ...-..+.+|||+.+...+ ...-||++++|.+||+|||+|...+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~----~d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKK----SDSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCccc----ccccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 458899999998842 2222456789999999754 3445899999999999999998776521 135899999
Q ss_pred eccCCCCCCccEEEEEECCccC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr 577 (605)
|.+....++++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9887788999999999998875
No 149
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.95 E-value=2.7e-05 Score=86.12 Aligned_cols=104 Identities=27% Similarity=0.374 Sum_probs=82.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC--cceeeccccCCCCCCeeccEEEEeee---cCCccEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDNWIPSWNEEFEFPLS---VPELALL 550 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D--~~k~kTkvv~nn~NPvWNEtf~F~v~---~pela~L 550 (605)
.+++|+|+.|.+|.+. ..+.-.|||+|.+.|.... ..|+.|++..||..|.|||+|+|-+. .|+.--|
T Consensus 1125 hkvtvkvvaandlkwq-------tsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YEL 1197 (1283)
T KOG1011|consen 1125 HKVTVKVVAANDLKWQ-------TSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYEL 1197 (1283)
T ss_pred ceEEEEEEecccccch-------hccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEEE
Confidence 5689999999988652 1244567999999986533 23557888889999999999999876 3666789
Q ss_pred EEEEEeccCCCCCCccEEEEEECCccC-Ccc--EEEEcc
Q 007399 551 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPLH 586 (605)
Q Consensus 551 rf~V~D~D~~~~ddflGq~~lpL~sLr-~Gy--R~IpL~ 586 (605)
.|+|+|+.....|..+|.+.++|.++. .|- -|+||-
T Consensus 1198 ~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pLg 1236 (1283)
T KOG1011|consen 1198 QFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPLG 1236 (1283)
T ss_pred EEeehhheeecccceeeeeeeehhhHhhcCceeEeeecc
Confidence 999999998777889999999999984 453 578883
No 150
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.81 E-value=6.8e-05 Score=84.23 Aligned_cols=108 Identities=23% Similarity=0.330 Sum_probs=83.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 555 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~ 555 (605)
..|.|+|..|++|+. .+..+..|||+.|.+- ++...||.+|..++-|.|.|+|.|.+.. ....|.|-||
T Consensus 5 ~sl~vki~E~knL~~------~~~~g~~D~yC~v~lD----~E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv~ 73 (800)
T KOG2059|consen 5 QSLKVKIGEAKNLPS------YGPSGMRDCYCTVNLD----QEEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYVW 73 (800)
T ss_pred cceeEEEeecccCCC------CCCCCCcCcceEEeec----chhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEEe
Confidence 458999999999974 2444668999999874 3556789999999999999999998853 3567899999
Q ss_pred eccCCCCCCccEEEEEECCccC--CccE-EEEc--cCCCCCcccC
Q 007399 556 EYDMSEKDDFGGQTCLPVSELK--QGIR-AVPL--HDRKGERYKS 595 (605)
Q Consensus 556 D~D~~~~ddflGq~~lpL~sLr--~GyR-~IpL--~d~~g~~l~~ 595 (605)
|.| .++|+.||.++|.-..|. +|.- |..| .|++.+.-+.
T Consensus 74 D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~ 117 (800)
T KOG2059|consen 74 DRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGK 117 (800)
T ss_pred ccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhcee
Confidence 999 788999999999877663 4543 3344 4666655433
No 151
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=97.77 E-value=8.1e-05 Score=81.57 Aligned_cols=120 Identities=18% Similarity=0.277 Sum_probs=92.4
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeecc-EEEEeeecCCc--cEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNE-EFEFPLSVPEL--ALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNE-tf~F~v~~pel--a~Lrf 552 (605)
++|.|+|..|+.||.- .. .....|.||+|.+.. ..+||.+..+++||.||. =|.|.|...++ .-|.+
T Consensus 3 gkl~vki~a~r~lpvm--dk---asd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVM--DK---ASDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccc--cc---ccccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 4589999999999741 11 123468899999864 577899999999999995 59999987776 46999
Q ss_pred EEEeccCCCCCCccEEEEEECCccC----------Cc---cEEEEccCCCCCcccCeEEEEEEEEC
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELK----------QG---IRAVPLHDRKGERYKSVKLLMHFEFI 605 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr----------~G---yR~IpL~d~~g~~l~~atLlv~i~f~ 605 (605)
++.|+|..+.+|-||.+.|.++-|. .| --|+|++|.--...+.-.+.|++++|
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999999999999999999988763 23 24789988544444446788888764
No 152
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.64 E-value=4.2e-05 Score=89.58 Aligned_cols=97 Identities=22% Similarity=0.298 Sum_probs=79.2
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eecCCc--cEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPEL--ALLR 551 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~pel--a~Lr 551 (605)
..+|+|-|.-+++|++ ......+||||+.++...|....|+||++++++.||.|||.+.+. +....+ ..|.
T Consensus 1523 ~~~LtImV~H~K~L~~------Lqdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ 1596 (1639)
T KOG0905|consen 1523 NGTLTIMVMHAKGLAL------LQDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQ 1596 (1639)
T ss_pred CceEEEEhhhhccccc------ccCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheee
Confidence 3568888888888854 112345899999999988888889999999999999999999987 322222 5789
Q ss_pred EEEEeccCCCCCCccEEEEEECCccC
Q 007399 552 IEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 552 f~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
+.||..+....+.|+|.+++||..+.
T Consensus 1597 ~sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1597 VSVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeeecccceeeeeeeeeeecchhhcc
Confidence 99999998888999999999999864
No 153
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.63 E-value=0.00043 Score=72.06 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=95.9
Q ss_pred CCcccceeeeccCcccccCCCCC---------CCCChHHHHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~ 181 (605)
+.||++=+|--|||+.--+-... +..--.....-|..|.|-+.|.|.-.+ ++++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 46999999999999875443221 122222346778999999999996433 2245688888543 28999
Q ss_pred HHHHHHhhhhhccCCCceEEEeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cCcEEEe
Q 007399 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIS 251 (605)
Q Consensus 182 dvi~aI~~~AF~~S~yPvIlSlE~Hc~------~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (605)
+|++.|+++.=.. .=-|||.+ .|.. +++-..+.++|.+.||+.|+.|.. .....|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999986455 66688877 4443 577788999999999999998753 23456899996 5555444
No 154
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.52 E-value=0.00079 Score=70.40 Aligned_cols=135 Identities=16% Similarity=0.219 Sum_probs=95.1
Q ss_pred CCcccceeeeccCcccccCCCCCC---------------------CCChHHHHHHHhCCccEEEEEeecCC-CCCCceEe
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLNS---------------------DCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~SS~e~Y~~aL~~GCRcvElD~WdG~-~~~~piv~ 169 (605)
+.||.+..|--|||+.--+-.-.+ ..--.....=|..|+|-++|++.-.+ .++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 579999999999998643322211 11112245667899999999995432 12456788
Q ss_pred eCCcccccchHHHHHHHHhhhhhccCCCceEEEeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 007399 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (605)
Q Consensus 170 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H-----c~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~L 244 (605)
||.-- -.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|+++||+.++.+ .....-|+.++|
T Consensus 86 H~~~~--~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLYS--GEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eeccc--ccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 88322 288999999999976555455688888643 345788888899999999999976 223456789999
Q ss_pred c--CcEEE
Q 007399 245 K--RRIII 250 (605)
Q Consensus 245 k--~KIli 250 (605)
. ||-+|
T Consensus 162 ~~~gk~vi 169 (288)
T cd08587 162 WESGKRVI 169 (288)
T ss_pred HhCCCeEE
Confidence 8 77444
No 155
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.45 E-value=0.00021 Score=74.40 Aligned_cols=105 Identities=24% Similarity=0.307 Sum_probs=77.8
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCcc--EEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 553 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela--~Lrf~ 553 (605)
..|.|+++.+..+. .+|.++-.||||.+.+...-....++||.+.+++.||+||+.|.|.+..-+|| -+.+.
T Consensus 233 ~~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~ls 306 (362)
T KOG1013|consen 233 PGLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALS 306 (362)
T ss_pred CceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEe
Confidence 34788888876552 35677889999998876322234467899999999999999999999888886 57889
Q ss_pred EEeccCCCCCCccEEEEEECCccCCccEEEEccCCCCCc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 592 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sLr~GyR~IpL~d~~g~~ 592 (605)
|||++....++++|-... -+||.-++++..|.+
T Consensus 307 vgd~~~G~s~d~~GG~~~------g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 307 VGDYDIGKSNDSIGGSML------GGYRRGEVHKHWGRC 339 (362)
T ss_pred ecccCCCcCccCCCcccc------cccccchhhcCcccc
Confidence 999998767888885332 345555666665554
No 156
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.13 E-value=0.00071 Score=76.33 Aligned_cols=76 Identities=26% Similarity=0.417 Sum_probs=62.4
Q ss_pred CCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC---------------CccEEEEEEEe-ccCCCCCC
Q 007399 501 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 564 (605)
Q Consensus 501 s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p---------------ela~Lrf~V~D-~D~~~~dd 564 (605)
+..|||++|...|.-... .++|++++.+-||.|||.|.|.+..+ +...|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~-~~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLK-EKKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhh-ccccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 348999999988743322 36899999999999999999998766 56678899998 55666699
Q ss_pred ccEEEEEECCccC
Q 007399 565 FGGQTCLPVSELK 577 (605)
Q Consensus 565 flGq~~lpL~sLr 577 (605)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999987
No 157
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=97.00 E-value=0.0017 Score=59.49 Aligned_cols=77 Identities=25% Similarity=0.478 Sum_probs=57.2
Q ss_pred CCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec---------------CCccEEEEEEEeccCCC------
Q 007399 503 PDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---------------PELALLRIEVHEYDMSE------ 561 (605)
Q Consensus 503 ~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~---------------pela~Lrf~V~D~D~~~------ 561 (605)
.++||+|.+.-+|.. ..++|+++.++|-|.|+.+++|.+.. -+.+-+.|.||.....+
T Consensus 33 VN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~ 111 (143)
T cd08683 33 VNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNSGEAISLAELLESAEIILEVWHRNPKSAGDTIK 111 (143)
T ss_pred cceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCCCccccHHHHhhcceEEeeeeecCCccccceec
Confidence 578999998766653 46689999999999999999998541 12257899999866432
Q ss_pred ----CCCccEEEEEECCcc---CCcc
Q 007399 562 ----KDDFGGQTCLPVSEL---KQGI 580 (605)
Q Consensus 562 ----~ddflGq~~lpL~sL---r~Gy 580 (605)
+|-.||.+.||+..| +.|.
T Consensus 112 ~~~~~DilLG~v~IPl~~Ll~~rsGi 137 (143)
T cd08683 112 IETSGDILLGTVKIPLRDLLTKRSGI 137 (143)
T ss_pred cCcCCcEEEEEEEeeHHHHhhcccCc
Confidence 234778888888876 4554
No 158
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=96.98 E-value=0.011 Score=56.63 Aligned_cols=101 Identities=18% Similarity=0.213 Sum_probs=67.9
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeeccccCCCCCCeeccEEEEeeecCCc---cEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lr 551 (605)
..++|+|+++.++... ...|.||++++......- ....|+.+.. -++.|||-++|++...++ |.|.
T Consensus 8 ~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~ArL~ 77 (158)
T cd08398 8 SNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSARLC 77 (158)
T ss_pred CCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhheEE
Confidence 4589999999987531 124779999886421111 1123443332 468999999999876554 8999
Q ss_pred EEEEeccCCC----CCCccEEEEEECCc----cCCccEEEEcc
Q 007399 552 IEVHEYDMSE----KDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~----~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
|+||+..... ....+|.+.++|-. |++|...+.|.
T Consensus 78 iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 78 LSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 9999976321 12469999999864 78897666554
No 159
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=96.94 E-value=0.011 Score=57.47 Aligned_cols=103 Identities=19% Similarity=0.177 Sum_probs=69.6
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCC---ccEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 551 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~Lr 551 (605)
..++|+|+++.++.. .....+.||++.+...... +....|+.+.-+-.+.|||.++|++...+ .|.|.
T Consensus 8 ~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~ArLc 79 (173)
T cd08693 8 EKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMARLC 79 (173)
T ss_pred CCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHeEE
Confidence 458999999998853 0123466888887642111 12234554443456999999999987544 48999
Q ss_pred EEEEeccCCC----------------CCCccEEEEEECCc----cCCccEEEEcc
Q 007399 552 IEVHEYDMSE----------------KDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 552 f~V~D~D~~~----------------~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
|+||+..... ....||++.++|-. |++|...+.|.
T Consensus 80 iti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 80 FAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 9999865321 13689999999864 78897766664
No 160
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=96.89 E-value=0.0075 Score=58.37 Aligned_cols=115 Identities=23% Similarity=0.198 Sum_probs=75.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeecccc--CCCC--CCeeccEEEEeeecCC---
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTL--EDNW--IPSWNEEFEFPLSVPE--- 546 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv--~nn~--NPvWNEtf~F~v~~pe--- 546 (605)
...+.|+|.++.+++.... ....|.||++.+......- ....|+.. .+.+ .+.|||.++|++...+
T Consensus 7 ~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LPr 80 (171)
T cd04012 7 TDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLPR 80 (171)
T ss_pred cccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCCh
Confidence 3458999999998864221 1235679999886422111 12244432 2332 5789999999986544
Q ss_pred ccEEEEEEEeccCCC---------CCCccEEEEEECCc----cCCccEEEEccC-CCCCcccC
Q 007399 547 LALLRIEVHEYDMSE---------KDDFGGQTCLPVSE----LKQGIRAVPLHD-RKGERYKS 595 (605)
Q Consensus 547 la~Lrf~V~D~D~~~---------~ddflGq~~lpL~s----Lr~GyR~IpL~d-~~g~~l~~ 595 (605)
-|.|.|++|+..... ....||++.+||-. |++|...+.|.- ....+++.
T Consensus 81 earL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~~~ 143 (171)
T cd04012 81 ESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPLGP 143 (171)
T ss_pred hHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcCCC
Confidence 489999999876443 34689999999864 789999888853 34444433
No 161
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=96.88 E-value=0.012 Score=55.88 Aligned_cols=103 Identities=19% Similarity=0.217 Sum_probs=69.5
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcc-eeeccccCCCCCCeeccEEEEeeecCCc---cEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRI 552 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~-k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf 552 (605)
.++|+|.+..+... ......+.||++++.-...... ...|+.+....++.|||.++|++...++ |.|.|
T Consensus 9 ~~~i~i~~~~~~~~-------~~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~i 81 (156)
T cd08380 9 NLRIKIHGITNINL-------LDSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLCL 81 (156)
T ss_pred CeEEEEEeeccccc-------cCCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEEE
Confidence 47888888776532 0112356788888764221111 2234433333579999999999765444 89999
Q ss_pred EEEeccCCC--CCCccEEEEEECCc----cCCccEEEEcc
Q 007399 553 EVHEYDMSE--KDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 553 ~V~D~D~~~--~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
+||+.+..+ ....||++.+||-. |++|...+.|.
T Consensus 82 tl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 82 SIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 999977543 35799999999864 78999888885
No 162
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=96.88 E-value=0.011 Score=62.10 Aligned_cols=135 Identities=19% Similarity=0.273 Sum_probs=90.0
Q ss_pred CCcccceeeeccCccc--ccC-CCCCCC------------------------CChHHHHHHHhCCccEEEEEeecCCCCC
Q 007399 112 TAPVSHYFIYTGHNSY--LTG-NQLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTY--L~g-~Ql~g~------------------------SS~e~Y~~aL~~GCRcvElD~WdG~~~~ 164 (605)
+.||.+..|--|||+- -.. +.-.|. +-......-|..|+|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 4699999999999964 222 211111 1112235667899999999996433234
Q ss_pred CceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCC---CHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCh
Q 007399 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL---TPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSP 241 (605)
Q Consensus 165 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc---~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP 241 (605)
+-.++||-. +. ++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|+++||+.|+.+.. ...-|+.
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL 160 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTL 160 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcH
Confidence 578999842 22 99999999999754444455888886 43 3455567888999999999985432 1345789
Q ss_pred hhcc---CcEEEec
Q 007399 242 ESLK---RRIIIST 252 (605)
Q Consensus 242 ~~Lk---~KIlik~ 252 (605)
++|. .+|+|-.
T Consensus 161 ~~l~~~~krVIi~y 174 (290)
T cd08616 161 EYLWEKGYQVIVFY 174 (290)
T ss_pred HHHHhCCCEEEEEE
Confidence 9997 3355544
No 163
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.82 E-value=0.00031 Score=73.16 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=76.0
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC---ccEEEE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRI 552 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~Lrf 552 (605)
..+..++..|.+|.. .+..+..||||+..+...-....+.+|++..|+.||.|||+..+.....+ .-.+|+
T Consensus 93 ~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~Rk 166 (362)
T KOG1013|consen 93 RMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLRK 166 (362)
T ss_pred hhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhhe
Confidence 557888999988732 35567789999988765444455688999999999999988766543332 346899
Q ss_pred EEEeccCCCCCCccEEEEEECCccCCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSELKQG 579 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~sLr~G 579 (605)
.|.|.+-..+++++||..+++..|.+-
T Consensus 167 ~vcdn~~~~~~~sqGq~r~~lkKl~p~ 193 (362)
T KOG1013|consen 167 VVCDNDKKTHNESQGQSRVSLKKLKPL 193 (362)
T ss_pred eeccCcccccccCcccchhhhhccChh
Confidence 999999888899999999999888754
No 164
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=96.59 E-value=0.0016 Score=75.97 Aligned_cols=94 Identities=19% Similarity=0.263 Sum_probs=75.2
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEE
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 552 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf 552 (605)
|....++|-|..|.+|.. .|.++..||||.+.+.+ ....-++..+.+++||+|++-|++....|-...+.+
T Consensus 610 pi~~LvrVyvv~A~~L~p------~D~ng~adpYv~l~lGk---~~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v 680 (1105)
T KOG1326|consen 610 PIKCLVRVYVVEAFSLQP------SDGNGDADPYVKLLLGK---KRTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIV 680 (1105)
T ss_pred cceeeEEEEEEEeeeccc------cCCCCCcCceeeeeecc---chhhhhhhcCcCCCCcHHHHHHHhhcccchhhccee
Confidence 445556777888888743 45667889999999754 122346778889999999999999988887788999
Q ss_pred EEEeccCCCCCCccEEEEEECCc
Q 007399 553 EVHEYDMSEKDDFGGQTCLPVSE 575 (605)
Q Consensus 553 ~V~D~D~~~~ddflGq~~lpL~s 575 (605)
.|||+|..+.++.+|+..+.|..
T Consensus 681 ~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 681 EVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred EEEEeecccccchhhceehhhhh
Confidence 99999999889999999988764
No 165
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.59 E-value=0.0098 Score=57.20 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=51.9
Q ss_pred CCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccCCCH
Q 007399 132 QLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (605)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc~~ 209 (605)
+...+-|.++|..|+.+||++||+|+.=-.| +.|||.|- -.+|+||++..++ -+.|.||.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999995444 36999998 7789999998776 356777777654
No 166
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.53 E-value=0.0093 Score=60.17 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45889999999999999999999996545 47999999887
No 167
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.51 E-value=0.0075 Score=60.39 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35788999999999999999999997555 47999998776
No 168
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=96.46 E-value=0.013 Score=56.20 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=60.5
Q ss_pred CCCceEEEEEecCCCC-cceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEEEEeccCCCCCCccEEEEEECCc--
Q 007399 502 PPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVSE-- 575 (605)
Q Consensus 502 ~~DPyV~V~i~G~p~D-~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~V~D~D~~~~ddflGq~~lpL~s-- 575 (605)
..|.||++.+...... .....|..+.-+-.+.|||-.+|+|...++ |.|.|+||+.+..+....+|.+.+||-.
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 3577999887642111 112244444434468899999999886655 8999999998755556799999999864
Q ss_pred --cCCccEEEEcc
Q 007399 576 --LKQGIRAVPLH 586 (605)
Q Consensus 576 --Lr~GyR~IpL~ 586 (605)
|++|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 78898888775
No 169
>PLN02964 phosphatidylserine decarboxylase
Probab=96.45 E-value=0.0063 Score=69.97 Aligned_cols=86 Identities=22% Similarity=0.182 Sum_probs=70.4
Q ss_pred CcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEE
Q 007399 474 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 553 (605)
Q Consensus 474 ~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~ 553 (605)
..+...|++++|. +. -.|+|..+-..| .+.+||.+.+++.||+||+...|.|...+..+.+|.
T Consensus 52 ~~~~~~~~~~~~~---~~----------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 114 (644)
T PLN02964 52 FSGIALLTLVGAE---MK----------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARIS 114 (644)
T ss_pred ccCeEEEEeehhh---hc----------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEEE
Confidence 3466888999886 11 136776555556 578899999999999999999999988888888999
Q ss_pred EEeccCCCCCCccEEEEEECCcc
Q 007399 554 VHEYDMSEKDDFGGQTCLPVSEL 576 (605)
Q Consensus 554 V~D~D~~~~ddflGq~~lpL~sL 576 (605)
|+|.+..+.++++|-+.+.+..+
T Consensus 115 ~~~~~~~s~n~lv~~~e~~~t~f 137 (644)
T PLN02964 115 VFETNRLSKNTLVGYCELDLFDF 137 (644)
T ss_pred EEecCCCCHHHhhhheeecHhhc
Confidence 99999999999999999977665
No 170
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.37 E-value=0.0018 Score=73.22 Aligned_cols=81 Identities=20% Similarity=0.418 Sum_probs=56.7
Q ss_pred eccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCC---------------------------------CC---CCc
Q 007399 522 KTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS---------------------------------EK---DDF 565 (605)
Q Consensus 522 kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~---------------------------------~~---ddf 565 (605)
-|.+...++||.|+|.|.|.|..-.-..+.+-+||+|.- +. |||
T Consensus 180 atsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDDF 259 (1103)
T KOG1328|consen 180 ATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDDF 259 (1103)
T ss_pred hcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCcccccc
Confidence 466667789999999999999765555688899998753 12 789
Q ss_pred cEEEEEECCccCC-cc-EEEEccCCCCCcccCeEEEEEE
Q 007399 566 GGQTCLPVSELKQ-GI-RAVPLHDRKGERYKSVKLLMHF 602 (605)
Q Consensus 566 lGq~~lpL~sLr~-Gy-R~IpL~d~~g~~l~~atLlv~i 602 (605)
+|...+||.++.+ |. +|.-|--.+.+.--.+.+-+++
T Consensus 260 LGciNipl~EiP~~Gld~WFkLepRS~~S~VqG~~~Lkl 298 (1103)
T KOG1328|consen 260 LGCINIPLAEIPPDGLDQWFKLEPRSDKSKVQGQVKLKL 298 (1103)
T ss_pred ccccccchhcCCcchHHHHhccCcccccccccceEEEEE
Confidence 9999999999964 53 5655654444443333333333
No 171
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.19 E-value=0.0067 Score=60.66 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
..+.|.++|+.|+..|+++||+|||=-.| +.|||+|..++-
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l~ 48 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTLD 48 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBST
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCeee
Confidence 34899999999999999999999996555 479999986543
No 172
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.19 E-value=0.013 Score=58.66 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.9
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+.|..+|..|+..||..||+|++=-.| +.|+|.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999997555 47999999886
No 173
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=96.04 E-value=0.043 Score=53.52 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=64.2
Q ss_pred eEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEE
Q 007399 477 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIE 553 (605)
Q Consensus 477 ~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~ 553 (605)
.++|+|.++..... +.......||++.+.....-....+|.....+-+|.|||-++|++...++ |.|.|+
T Consensus 11 ~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc~t 83 (178)
T cd08399 11 KFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLNLQ 83 (178)
T ss_pred CEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEEEE
Confidence 48888888763321 11122345888877642111122345555445579999999999876554 899999
Q ss_pred EEeccCCC----------------CCCccEEEEEECCc----cCCccEEEEc
Q 007399 554 VHEYDMSE----------------KDDFGGQTCLPVSE----LKQGIRAVPL 585 (605)
Q Consensus 554 V~D~D~~~----------------~ddflGq~~lpL~s----Lr~GyR~IpL 585 (605)
||+..... ....||++.++|-. ||+|...+.+
T Consensus 84 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 84 IYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 99853211 24578889888754 7889766544
No 174
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=95.93 E-value=0.022 Score=57.35 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.8
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+.|.++|.+|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999997555 47999998776
No 175
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.88 E-value=0.029 Score=57.34 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
=+-|.++|..|+..||..||+|++=-.| +.|||+|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999997555 479999999873
No 176
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=95.86 E-value=0.015 Score=50.03 Aligned_cols=59 Identities=19% Similarity=0.251 Sum_probs=47.4
Q ss_pred cceeeccccCCCCCCeeccEEEEeeecCCc--cEEEEEEEeccCCCCCCccEEEEEECCccCC
Q 007399 518 TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 578 (605)
Q Consensus 518 ~~k~kTkvv~nn~NPvWNEtf~F~v~~pel--a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~ 578 (605)
....||.+.+...||+|+|+|.|++....+ ..|.|.|+. ...+.+.||++.+.++++.+
T Consensus 34 pv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~--~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 34 PVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT--QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred CccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec--cCCccceeeEEEeecccCCH
Confidence 456788888878999999999999876555 467888887 34567899999999998754
No 177
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.71 E-value=0.035 Score=56.30 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=65.8
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc------cchHHHHHHHHhhh--hh-
Q 007399 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEY--AF- 192 (605)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 192 (605)
-|||-|.--. ....||..||-.||+|||=- + ++.+|.|-..+.. +..+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 5999998743 45579999999999999953 2 3678888765543 34566666655443 23
Q ss_pred ccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccC
Q 007399 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (605)
Q Consensus 193 ~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~ 229 (605)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998654433444444456666554
No 178
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=95.63 E-value=0.1 Score=54.57 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=89.9
Q ss_pred CCcccceeeeccCcccccCCCCCCCCChHHHHHHHhCCccEEEEEe---ecC----CCCCCceEeeCCcccccchHHHHH
Q 007399 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~---WdG----~~~~~piv~HG~Tlts~i~f~dvi 184 (605)
+.||++..|--|||+.-.+---.+..--.....=|..|+|-+.|=| ++. ...++-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 6799999999999997654322223333445777899999987755 221 01123345565 33567999999
Q ss_pred HHHhhhhhccCCCceEEEecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccC---cEEEecC
Q 007399 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKR---RIIISTK 253 (605)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~-----Hc-~~~qQ~~ma~~~~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 253 (605)
+.|+.+.=....=-|||++-+ || .+.+ ....+.+.+.|++.-+.+. ......-|+.++|.+ ++||-.+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987555556679999943 44 3554 5778889999988544432 111234578898844 4555443
No 179
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=95.60 E-value=0.039 Score=51.54 Aligned_cols=82 Identities=23% Similarity=0.335 Sum_probs=53.8
Q ss_pred ceEEEEEecCCCCcc--eeeccccCCC-CCCeeccEEEEeeec---CCccEEEEEEEeccCCCCC----CccEEEEEECC
Q 007399 505 FYARVGIAGVPADTV--MKKTKTLEDN-WIPSWNEEFEFPLSV---PELALLRIEVHEYDMSEKD----DFGGQTCLPVS 574 (605)
Q Consensus 505 PyV~V~i~G~p~D~~--k~kTkvv~nn-~NPvWNEtf~F~v~~---pela~Lrf~V~D~D~~~~d----dflGq~~lpL~ 574 (605)
.||++.+.-....-. ...|+.+.-+ .++.|||.++|++.. |--|.|.|+|++.+..... ..||++.+||-
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 366666652111111 2256555545 689999999999864 4458999999997765444 58999999986
Q ss_pred c----cCCccEEEEcc
Q 007399 575 E----LKQGIRAVPLH 586 (605)
Q Consensus 575 s----Lr~GyR~IpL~ 586 (605)
. |++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 5 67888777774
No 180
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.51 E-value=0.074 Score=55.42 Aligned_cols=137 Identities=17% Similarity=0.229 Sum_probs=89.9
Q ss_pred cCCCCcccceeeeccCccccc---CCCCC---CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHH
Q 007399 109 HDMTAPVSHYFIYTGHNSYLT---GNQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (605)
Q Consensus 109 qDM~~PLs~YfI~SSHNTYL~---g~Ql~---g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~d 182 (605)
.|-+.||++=.|--||||.-. +..+. +.+--..+..=|..|+|-+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 345689999999999998753 22211 1222334577789999999998844 257999963 2468999
Q ss_pred HHHHHhhhhhccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCc-EEEecCC
Q 007399 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRR-IIISTKP 254 (605)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (605)
|++.|+++-=....=-|||++......+......+.+.+.||+.|+.+... .... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~~~-~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQDDS-VFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCCCc-cccc-cHHHHhCCcEEEEEcC
Confidence 999999864333334499999655432222235578899999999865322 1122 66777644 5555554
No 181
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.30 E-value=0.089 Score=53.41 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.7
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4788999999999999999999995444 37999998876
No 182
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.16 E-value=0.074 Score=54.14 Aligned_cols=39 Identities=21% Similarity=0.368 Sum_probs=33.9
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
-+-|..+|..|+..||+.||+|+.=-.| +.|||.|=.|+
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 3788999999999999999999997655 47999998766
No 183
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=94.91 E-value=0.11 Score=53.66 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
.-+-|..+|.+|+..||..||+|+|=-.| +.|||.|-.+|
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 45788999999999999999999996555 46999997665
No 184
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.84 E-value=0.1 Score=53.84 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=33.3
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 173 (605)
.-+-|..+|..|+..|+..||+|+|=-.| +.|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 56889999999999999999999995444 4799999863
No 185
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=94.82 E-value=0.12 Score=52.01 Aligned_cols=78 Identities=22% Similarity=0.342 Sum_probs=54.2
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc------------------------cc-hHHHHHHHH
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------------------------PV-ELIKCLRSI 187 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts------------------------~i-~f~dvi~aI 187 (605)
..-+-|.+++..|+..||+.||+|++=-.| +.|||+|=.|+.. +| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345889999999999999999999996544 4799999877531 24 589999876
Q ss_pred hhhhhccCCCceEEEeccCCCHHHHHHHHHHHH
Q 007399 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT 220 (605)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc~~~qQ~~ma~~~~ 220 (605)
++. +.|-||.-.. .....+++.++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~ 113 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVE 113 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHH
Confidence 441 3466666543 22334444444
No 186
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=94.46 E-value=0.16 Score=43.67 Aligned_cols=63 Identities=13% Similarity=0.340 Sum_probs=49.9
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE-N---GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~-~---~~~~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|-.+|.+|++ + ++|+.++|+..|.++ .++. .+.+++.+++..... ...+.++++.|..+|..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~------d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDR------NKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHHH
Confidence 47789999996 2 599999999999752 4664 689999999887642 23478999999998865
No 187
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=93.97 E-value=0.23 Score=49.01 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=42.3
Q ss_pred CChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHh
Q 007399 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (605)
Q Consensus 137 SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (605)
-+..++.+|+.. .-||+|++.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 7 NTl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 7 NTITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 358999999998 9999999986 5 5799999999988888999998874
No 188
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=93.91 E-value=0.063 Score=55.45 Aligned_cols=41 Identities=20% Similarity=0.314 Sum_probs=35.7
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
-+-|.++|..|+..||++||+|++=-.| +.|||.|-.||..
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~r 54 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLDR 54 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCcccc
Confidence 5788999999999999999999997655 4799999988643
No 189
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.65 E-value=0.072 Score=54.30 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=35.3
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|.++|.+|+..||++||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45789999999999999999999995444 479999998874
No 190
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=93.00 E-value=0.11 Score=53.46 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 34788999999999999999999997555 479999998874
No 191
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.74 E-value=0.13 Score=52.70 Aligned_cols=41 Identities=20% Similarity=0.192 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.||.
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l~ 53 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETLD 53 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCccc
Confidence 35889999999999999999999997555 479999998873
No 192
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=92.73 E-value=0.23 Score=55.72 Aligned_cols=83 Identities=22% Similarity=0.294 Sum_probs=67.1
Q ss_pred eeccccCCCCCCeeccEEEEeeecCCccEEEEEEEeccCC----CCCCccEEEEEECCccC-CccEEEEccCCCCCcccC
Q 007399 521 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSELK-QGIRAVPLHDRKGERYKS 595 (605)
Q Consensus 521 ~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~----~~ddflGq~~lpL~sLr-~GyR~IpL~d~~g~~l~~ 595 (605)
.+|.++.+..||.|-+.|.....+.....|+|.|+|-+.. ...+|+|++..-++.+- ..-+.++|.-+.++....
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4789999999999999999888888888999999997753 34689999998888764 455667777777777777
Q ss_pred eEEEEEEE
Q 007399 596 VKLLMHFE 603 (605)
Q Consensus 596 atLlv~i~ 603 (605)
+++.|+.+
T Consensus 123 g~iti~ae 130 (529)
T KOG1327|consen 123 GTITISAE 130 (529)
T ss_pred ccEEEEee
Confidence 78888765
No 193
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=92.30 E-value=0.19 Score=52.13 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|=.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999996544 479999998874
No 194
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.19 E-value=0.16 Score=51.38 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|..+|.+|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999997555 479999999874
No 195
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=92.17 E-value=0.17 Score=53.27 Aligned_cols=40 Identities=20% Similarity=0.273 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|.++|..|+..||+.||+|+|=-.| +.|||.|=.|+.
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l~ 79 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENLL 79 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCcccc
Confidence 4788999999999999999999996545 479999988873
No 196
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=92.04 E-value=0.18 Score=53.72 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=36.4
Q ss_pred CCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 132 QLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 132 Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 11 ~~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 11 GYLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 3456889999999999999999999996545 479999998873
No 197
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=92.00 E-value=0.2 Score=54.22 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=36.1
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+.=+.|.++|..|+..|+.-||+|+|=-.| +.|||.|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 345889999999999999999999997555 479999998764
No 198
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=91.69 E-value=0.22 Score=51.97 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=39.6
Q ss_pred cccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 127 YL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
|+.+.-..-+.+..+|..|+..|+..||+||+=-.| +.|||+|=.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeEe
Confidence 454444556889999999999999999999996544 4799999988753
No 199
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=91.57 E-value=0.14 Score=54.72 Aligned_cols=106 Identities=24% Similarity=0.239 Sum_probs=75.4
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
+..|.|.||.|++|... ....+.++|||+|++.+...-..+.+|+...++..|.+-....|.=..| ...|.+.|
T Consensus 268 ~g~l~vEii~ar~l~~k-----~~~k~~~apyVkVYlL~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv 341 (405)
T KOG2060|consen 268 KGDLEVEIIRARGLVVK-----PGSKSLPAPYVKVYLLENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTV 341 (405)
T ss_pred cCceeEEEEeccccccc-----CCcccccCceeEEEEcCCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEE
Confidence 35689999999999642 1222468999999998755545678999999999998887777765444 46788888
Q ss_pred Ee-ccCCCCCCccEEEEEECCccC----CccEEEEcc
Q 007399 555 HE-YDMSEKDDFGGQTCLPVSELK----QGIRAVPLH 586 (605)
Q Consensus 555 ~D-~D~~~~ddflGq~~lpL~sLr----~GyR~IpL~ 586 (605)
|. +....+..|+|.+.+-+.+|. ++.-|.+|+
T Consensus 342 ~gdygRmd~k~fmg~aqi~l~eL~ls~~~~igwyKlf 378 (405)
T KOG2060|consen 342 WGDYGRMDHKSFMGVAQIMLDELNLSSSPVIGWYKLF 378 (405)
T ss_pred eccccccchHHHhhHHHHHhhhhccccccceeeeecc
Confidence 84 444445678888877777763 344555554
No 200
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=91.27 E-value=0.21 Score=52.80 Aligned_cols=42 Identities=17% Similarity=0.239 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
.-+.+..+|..|+..|+..||+|++=-.| +.+||.|-.+|..
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~r 54 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLDN 54 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhcC
Confidence 34778999999999999999999996555 4799999998743
No 201
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=91.24 E-value=0.22 Score=51.77 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=34.0
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tl 174 (605)
+-+..++..|+..||..||+|||=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999996555 47999999888
No 202
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=91.21 E-value=0.21 Score=52.51 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.=+.|..+|..|+..||..||+|++=-.| +.|||.|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34789999999999999999999997555 479999988774
No 203
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=90.94 E-value=0.25 Score=52.52 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=39.6
Q ss_pred cCcccccCCCCCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 123 SHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.|.-| .-..-+.|..+|..|+..||..||+|++=-.| +.|||.|-.||.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 66653 22345889999999999999999999997655 479999998874
No 204
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=90.72 E-value=0.24 Score=51.54 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.8
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+-+..+|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999996555 479999998875
No 205
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=90.45 E-value=0.38 Score=48.61 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=35.2
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+.|.+||.+|+..|++.||+|+.=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45889999999999999999999995444 479999998874
No 206
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=90.28 E-value=0.38 Score=52.07 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=84.2
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeec-C----Cc---
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P----EL--- 547 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~-p----el--- 547 (605)
..|.+.|.++++.+..... .-.|.||++++.-......+.+|.+++++-.|.|+|.|...+.- + ++
T Consensus 367 ~elel~ivrg~~~pvp~gp------~hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~ 440 (523)
T KOG3837|consen 367 QELELAIVRGQKNPVPGGP------MHLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRR 440 (523)
T ss_pred hHhHHHHhhcccCCCCCCc------hhHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHH
Confidence 3467777788776542111 11467999887543323457789999999999999999988753 2 11
Q ss_pred ---cEEEEEEEeccCC-CCCCccEEEEEECCccCCc---cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 548 ---ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 548 ---a~Lrf~V~D~D~~-~~ddflGq~~lpL~sLr~G---yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
--+.|.|+....+ .+|.++|.+.+.|.-|..- ...+||+| |...-++.|-|++.+
T Consensus 441 fkr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 441 FKRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HHhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 2488999987754 4577999999988877654 34689987 445557788888764
No 207
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=90.06 E-value=0.29 Score=50.02 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=35.6
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-+-|.+++..|+..|+..||+||.=-.| +.|||+|=.||.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45778999999999999999999997555 479999998875
No 208
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=90.06 E-value=0.32 Score=51.59 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.7
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
+.-+.+.++|..|+..||..||+|++=-.| +.|||.|-.+|..
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~r 54 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELSG 54 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCcccc
Confidence 456889999999999999999999996555 4799999988743
No 209
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=89.93 E-value=1.2 Score=44.02 Aligned_cols=41 Identities=24% Similarity=0.418 Sum_probs=31.6
Q ss_pred cceeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEecc
Q 007399 518 TVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYD 558 (605)
Q Consensus 518 ~~k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D 558 (605)
...++|-+..-+-+|.|+|++...+... +.+-|+|.++...
T Consensus 52 ~se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S 94 (189)
T cd08695 52 CSEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCS 94 (189)
T ss_pred cceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEee
Confidence 3456788888788999999999887654 3478999887744
No 210
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=89.91 E-value=0.85 Score=39.08 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=47.7
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+++..++..+-. ...+.++++.|..++.+
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHHH
Confidence 477899999943 689999999999854433 244 7788888887642 23468999999998875
No 211
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=89.68 E-value=1.7 Score=37.87 Aligned_cols=64 Identities=14% Similarity=0.330 Sum_probs=46.1
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
-|..+|.+||++ .+|+..+|+..|+.+=.. ...+.+.+..|+...- ..+.+.++|.+|..++..
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD------~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLD------DCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhC------CCCCCcCcHHHHHHHHHH
Confidence 467899999977 899999999999765321 0124566777776643 224578999999988764
No 212
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=89.67 E-value=1.8 Score=38.07 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=45.1
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCc-ceeeccccCCCCCCeeccEEEEeeecCCc---cEEEEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIE 553 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~-~k~kTkvv~nn~NPvWNEtf~F~v~~pel---a~Lrf~ 553 (605)
+.+.+...++..... ..+..+.||++++......- ....|+.+.-+..+.|||-.+|++...++ |.|.|+
T Consensus 13 ~~~~~~~~~~~~l~~------~~~~~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~~ 86 (100)
T smart00142 13 LVITIALIHGIPLNW------SRDYSDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCIT 86 (100)
T ss_pred eEEEEEEeeCCCccc------ccCcceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEEE
Confidence 455666665554311 11114779999886422111 12245444333458999999999875554 899999
Q ss_pred EEecc
Q 007399 554 VHEYD 558 (605)
Q Consensus 554 V~D~D 558 (605)
||+..
T Consensus 87 i~~~~ 91 (100)
T smart00142 87 IYEVK 91 (100)
T ss_pred EEEee
Confidence 99854
No 213
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=89.31 E-value=1.3 Score=38.25 Aligned_cols=64 Identities=11% Similarity=0.255 Sum_probs=46.2
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~----~~~~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
-|..+|.+|+.. .+|+.++|+.||..+-. ....+...+.+|+..+-. .+.+.+++++|+.++..
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHHH
Confidence 467889998832 38999999999998621 112355678888876531 23468999999988764
No 214
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=89.24 E-value=4.5 Score=44.05 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.8
Q ss_pred HHHHHhCCccEEEEEeecCC-CCCCceEeeCCcccccchHHHHHHHHhhhhhcc--CCCceEEEeccC---CCHHHHHHH
Q 007399 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (605)
Q Consensus 142 Y~~aL~~GCRcvElD~WdG~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvIlSlE~H---c~~~qQ~~m 215 (605)
..+=|..|+|-+.|=|=-.+ +.++-.+.||.. .++|.||++.|+++.=.. ..=-|||.+-.. =....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 34557889999888774322 224556777652 478999999999854332 234577777442 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----CcEEEecCCC
Q 007399 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (605)
Q Consensus 216 a~~~~~i~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (605)
.+.|+. |||+|. |+.... . -+.++|- .+|+|-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 667776 999987 433322 2 3788887 6788887554
No 215
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=89.11 E-value=0.53 Score=47.62 Aligned_cols=40 Identities=23% Similarity=0.143 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|..|+..|++.|++-||+|++=-.| +.+||.|-.|++
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~~ 53 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDES 53 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcCc
Confidence 4788999999999999999999997555 479999988763
No 216
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=88.81 E-value=1.3 Score=38.19 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=49.5
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~-~--~~~~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.|..+|+.|.. + ++|+..+|+..|..+=++ .++. +++.++|...-. ...+.+++++|..+|.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHHH
Confidence 57889999997 4 899999999999975344 3566 788888876541 24578999999999876
No 217
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=88.56 E-value=0.52 Score=49.77 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=36.2
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+.-+.|..+|..|+..||..||+|++=-.| +.+||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999997555 479999988874
No 218
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=88.25 E-value=0.31 Score=57.67 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=69.5
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEe-eec--------CCcc
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELA 548 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~-v~~--------pela 548 (605)
+++-|..|..|.. .++.+..|||..|...| +.+.|.++.+++||.|+.+..|. +.. ...-
T Consensus 208 lR~yiyQar~L~a------~dk~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~pp 276 (1105)
T KOG1326|consen 208 LRSYIYQARALGA------PDKDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPP 276 (1105)
T ss_pred hHHHHHHHHhhcC------CCcccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCC
Confidence 4444555555542 24446689999999887 56689999999999999999885 321 1124
Q ss_pred EEEEEEEeccCCCCCCccEEEEEECC-ccCCc-cEEEEccC
Q 007399 549 LLRIEVHEYDMSEKDDFGGQTCLPVS-ELKQG-IRAVPLHD 587 (605)
Q Consensus 549 ~Lrf~V~D~D~~~~ddflGq~~lpL~-sLr~G-yR~IpL~d 587 (605)
.+.|.|+|.|..+.++|.|....... .+.+| -.|+|++.
T Consensus 277 i~v~e~yd~dr~g~~ef~gr~~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 277 IRVFEVYDLDRSGINEFKGRKKQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred eEEEEeehhhhhchHHhhcccccceEEEecCCccceEEeec
Confidence 68899999999999999998654333 23333 46777764
No 219
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=88.24 E-value=2.1 Score=37.00 Aligned_cols=64 Identities=13% Similarity=0.264 Sum_probs=47.4
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~--~-~-~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
++..+|+.|.. + + .|+.++|+..|..+.++ ...+.+.+.+|+..+-. .+.+.+++++|..+|.+
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHHH
Confidence 57778999993 3 4 59999999999876432 12366788888888642 23468999999998765
No 220
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=87.97 E-value=1.9 Score=41.95 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=36.1
Q ss_pred eeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCCCC---CccEEEEEECCc----cCCccEEEEcc
Q 007399 520 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEKD---DFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 520 k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~~d---dflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
...|.+...+-+|.|+|+|..++..+ +-.-|.|++++.....+. ..+|-+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 45677777778999999999887643 347899999986543211 466777777654 23445556664
No 221
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=87.94 E-value=0.94 Score=34.56 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=40.3
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 38 ~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
+.|+.++|+.+| ..++....+.+++..|+..+-.. +.+.+++++|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 568999999999 55666437899999999988632 347899999999985
No 222
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=87.64 E-value=0.65 Score=48.80 Aligned_cols=43 Identities=14% Similarity=0.177 Sum_probs=36.3
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
..-+.+..+|..|+..||.-||+||+=-.| +.|||+|=.++..
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~r 61 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTISV 61 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCccee
Confidence 345889999999999999999999996555 4799999887643
No 223
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=87.36 E-value=3.7 Score=40.67 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=48.2
Q ss_pred ceeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCCC----CCccEEEEEECC-----ccCCccEEEEcc
Q 007399 519 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK----DDFGGQTCLPVS-----ELKQGIRAVPLH 586 (605)
Q Consensus 519 ~k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~~----ddflGq~~lpL~-----sLr~GyR~IpL~ 586 (605)
..++|-+..-+-+|.|+|++...+... +-+-|+|.++....... ...+|-+.+||- .|+.|-+.++|+
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 456777777778999999998887644 34789999976442211 246788888874 277787777775
No 224
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=87.28 E-value=0.69 Score=49.28 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=36.5
Q ss_pred CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
..-|-|..+|..|+..||.-||+|++=-.| +.|||.|=.||..
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~R 76 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLKR 76 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCcccc
Confidence 445889999999999999999999997555 4799999988743
No 225
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=86.33 E-value=1.2 Score=50.20 Aligned_cols=82 Identities=22% Similarity=0.302 Sum_probs=58.7
Q ss_pred cCCCCCCCceEEEEEec-CCCCcceeeccccCCCCCCeeccEE-EEe-eecCC-ccEEEEEEEeccCCCCCCccEEEEEE
Q 007399 497 FDAYSPPDFYARVGIAG-VPADTVMKKTKTLEDNWIPSWNEEF-EFP-LSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 572 (605)
Q Consensus 497 ~d~~s~~DPyV~V~i~G-~p~D~~k~kTkvv~nn~NPvWNEtf-~F~-v~~pe-la~Lrf~V~D~D~~~~ddflGq~~lp 572 (605)
.+.++..|||.++.-.. ......-++|.++++++||.|-... ... +...+ -+.+.+.+||++..++.+++|++.-+
T Consensus 151 kd~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 151 KDFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPFSISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred ccccccCCcceEEEEecCCCceeeccccceeccCCCCcccccccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 46678899998776432 2222235689999999999997532 221 22222 35688999999988888999999999
Q ss_pred CCccCC
Q 007399 573 VSELKQ 578 (605)
Q Consensus 573 L~sLr~ 578 (605)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 998864
No 226
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=84.96 E-value=2.2 Score=41.38 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=46.8
Q ss_pred ccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCC-----CCCccEEEEEECCc-----cCCccEEEEccCC
Q 007399 523 TKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-----KDDFGGQTCLPVSE-----LKQGIRAVPLHDR 588 (605)
Q Consensus 523 Tkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~-----~ddflGq~~lpL~s-----Lr~GyR~IpL~d~ 588 (605)
|.++..+-+|.|+|++...+... +..-|.|++++-+... ....+|-+.+||-. ++.|...+|++-.
T Consensus 56 ~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k~ 133 (178)
T cd08679 56 TSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYKY 133 (178)
T ss_pred EEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEec
Confidence 44444448899999998887533 3578999999865332 24678888888877 6778777777633
No 227
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=84.62 E-value=2.9 Score=35.82 Aligned_cols=65 Identities=12% Similarity=0.238 Sum_probs=48.7
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~-~~--~-~~~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|.++|+.|. .+ + .|+.++|+..|+..-++. ..+.+.+.+|+..+-.. ..+.++++.|..++..
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d------~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN------GDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC------CCCcCcHHHHHHHHHH
Confidence 47889999996 43 6 499999999998643331 24678899999987521 3467999999988765
No 228
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=84.38 E-value=23 Score=32.47 Aligned_cols=114 Identities=19% Similarity=0.183 Sum_probs=67.7
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccC-CCCCCeeccEEEEeeec---C-----C
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLE-DNWIPSWNEEFEFPLSV---P-----E 546 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~-nn~NPvWNEtf~F~v~~---p-----e 546 (605)
-.+.|+|....+++. .+..|.|.............|.... .+..-.|||+|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 347778888777642 1123334433211111123444333 24567899999988652 1 1
Q ss_pred ccEEEEEEEeccCCCCCCccEEEEEECCccCCc-----cEEEEccCCCCCcccCeEEEEEEEE
Q 007399 547 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 604 (605)
Q Consensus 547 la~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~G-----yR~IpL~d~~g~~l~~atLlv~i~f 604 (605)
--.+.|.|+.....++...+|.+.|.|...-.- .+.++|... +-..|+|.|.|.+
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 136889998875334336899999999987542 245677665 4456788887765
No 229
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=83.67 E-value=1.2 Score=45.33 Aligned_cols=38 Identities=24% Similarity=0.276 Sum_probs=33.2
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~T 173 (605)
-+-|.++|..|+..|+.+||+|+.=-.| +.+||+|=+|
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~~ 56 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDET 56 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCccC-CcEEEecccc
Confidence 3788999999999999999999997655 4799999873
No 230
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=83.44 E-value=1.1 Score=45.58 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+-|..+|..|+..|+ -||+|++=-.| +.|||+|=.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 4678999999999999 89999997655 479999988764
No 231
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=83.41 E-value=1.2 Score=48.11 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCC-cc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG-TM 174 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~-Tl 174 (605)
.-+-|.++|..|+.+|+.-||+|++=-.| +.|||.|=. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 35789999999999999999999997555 479999985 44
No 232
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=83.32 E-value=5.1 Score=29.73 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.7
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 27 i~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
+..+|..|-.+ +.++.++|...++... . ..+.+.+..++.++... ..+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 56788888754 7899999999998643 3 35777788888887522 23579999998876
No 233
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=83.05 E-value=1.2 Score=47.12 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=34.3
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
+-+.++|..|+..|+..||+||+--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 678899999999999999999997655 479999998874
No 234
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=82.94 E-value=15 Score=35.14 Aligned_cols=126 Identities=19% Similarity=0.186 Sum_probs=82.5
Q ss_pred CCcceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCC------
Q 007399 473 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------ 546 (605)
Q Consensus 473 p~~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe------ 546 (605)
|.+..|.|+|+.|+-...-. .+.-+..+..+.+.+.= ..++++|+.+.-..+|.++|.|-|.+....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l----~~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHL----QEPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhh----hccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 34567999999997542100 00002334444454431 137899999999999999999999986442
Q ss_pred c-------cEEEEEEEeccCCCCCCccEEEEEECCc-cCCccE----EEEccCCCCC-cccCeEEEEEEEEC
Q 007399 547 L-------ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEFI 605 (605)
Q Consensus 547 l-------a~Lrf~V~D~D~~~~ddflGq~~lpL~s-Lr~GyR----~IpL~d~~g~-~l~~atLlv~i~f~ 605 (605)
. .-|.+.|--.|..+...++|...+.-.. |..|+. .|.|....++ .++-+-|-++++++
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lELl 150 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLELL 150 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEee
Confidence 1 2467777766766666889988887765 456774 4677776666 34556777888763
No 235
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=82.49 E-value=1.7 Score=46.75 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=35.3
Q ss_pred CCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+.|..||.+|...|+.|||+|+=...| +.+|+.|=-|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 4678999999999999999999999887 578999976655
No 236
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=82.41 E-value=5.5 Score=34.35 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=47.4
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..+-.+ +.++.++|+.+|+.. ..+.+++..|+..+... ..+.+++++|..+|..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~~------~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADID------NDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence 34677788888643 889999999999872 35778888888876421 3467999999988775
No 237
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=82.36 E-value=1.5 Score=47.41 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=35.0
Q ss_pred CCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc
Q 007399 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 134 ~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt 175 (605)
.-|-+..+|..|+..||..||+|++=-.| +.|||.|=.||.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999996555 479999998874
No 238
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=81.72 E-value=1.8 Score=45.73 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=32.8
Q ss_pred CChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccc
Q 007399 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA 176 (605)
Q Consensus 137 SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts 176 (605)
++...++.|...|++-||+|++=-.| +.|||+|-+++..
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~~ 54 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVPV 54 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceEe
Confidence 46789999999999999999996444 4799999988743
No 239
>PTZ00183 centrin; Provisional
Probab=81.16 E-value=6.3 Score=36.28 Aligned_cols=65 Identities=18% Similarity=0.395 Sum_probs=49.5
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
...++..+|..|-.+ +.++.++|..+|...+ . ..+.+++..++..+... ..+.++++.|..++.+
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhc
Confidence 456788899888643 7899999999998654 3 46888888898887622 2356999999988875
No 240
>PTZ00184 calmodulin; Provisional
Probab=79.58 E-value=7.2 Score=35.31 Aligned_cols=65 Identities=17% Similarity=0.383 Sum_probs=45.8
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+..+..+|..|-.+ +.++.++|..+|..... ..+.+.+..|+.++... ..+.+++++|..+|.+
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADVD------GDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCCC------CCCcCcHHHHHHHHhc
Confidence 445677888888533 77899999988877532 35677778887765421 2356899999988875
No 241
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=79.12 E-value=2.4 Score=31.78 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=23.2
Q ss_pred HHHHHHHHhh---CC-CCcCHHHHHHHHHHH
Q 007399 26 AVKSMFDQYS---EN-GTMTVDHLHRFLIEV 52 (605)
Q Consensus 26 ei~~if~~~~---~~-~~~~~~~~~~Fl~~~ 52 (605)
-|..+|.+|| ++ .+|+..+|+..|.++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778999999 34 899999999999865
No 242
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=77.97 E-value=6.3 Score=31.04 Aligned_cols=63 Identities=17% Similarity=0.471 Sum_probs=41.9
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 27 i~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
|+.+|+.|=.+ +.++.++|..++...... .+.+...+.++..-.. .+..+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~--~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFRE--FDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHH--HTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHH--hCCCCcCCCcHHHHhccC
Confidence 67899998643 899999999999987654 2344444443332211 112245789999999875
No 243
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=76.95 E-value=11 Score=32.23 Aligned_cols=64 Identities=16% Similarity=0.283 Sum_probs=47.4
Q ss_pred HHHHHHHHhh-C-C-C-CcCHHHHHHHHHHH---cCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYS-E-N-G-TMTVDHLHRFLIEV---QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~-~-~-~-~~~~~~~~~Fl~~~---Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+|..+|+.|. . + + .|+.++|+..|+.+ ......+.+++.++|...-. ...+.+++++|..++..
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~------n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS------DGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHHH
Confidence 6889999997 2 3 6 59999999999861 01123577889999887642 23478999999988764
No 244
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=76.80 E-value=0.58 Score=31.68 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.8
Q ss_pred cCCCceEEEeccCC
Q 007399 194 ASEYPVVITLEDHL 207 (605)
Q Consensus 194 ~S~yPvIlSlE~Hc 207 (605)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
No 245
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=76.46 E-value=12 Score=29.20 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=42.4
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHc
Q 007399 28 KSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (605)
Q Consensus 28 ~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (605)
..+|..+-.+ +.++.++|..+|... + .+.+.+..|+..+... ..+.+++++|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC------CCCcCCHHHHHHHHH
Confidence 3567777543 889999999999863 2 4778888898877532 236799999987764
No 246
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=73.74 E-value=6.7 Score=34.08 Aligned_cols=62 Identities=15% Similarity=0.303 Sum_probs=38.0
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCC---------CCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDK---------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 27 i~~if~~~~~~-~~~~~~~~~~Fl~~~Q~~~~---------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
.+++|..+++. +.|+...|..||.+..+-.. ..+..+++.++.-. .+..++.+.|+.+|+++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--------~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--------LSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--------T-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--------CCCccCHHHHHHHHHhC
Confidence 57899999976 89999999999998764321 12223333333211 24679999999999986
No 247
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=72.91 E-value=4 Score=43.19 Aligned_cols=40 Identities=13% Similarity=-0.069 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCcc--EEEEEeecCCCCCCceEeeCCccc
Q 007399 135 SDCSDVPIIRALQKGVR--VIELDIWPNSKKDNVDVLHGGTMT 175 (605)
Q Consensus 135 g~SS~e~Y~~aL~~GCR--cvElD~WdG~~~~~piv~HG~Tlt 175 (605)
-+.+.++|..|+..|+. -||+|++=-.| +.|||.|..+|.
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L~ 55 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNLD 55 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCcccc
Confidence 47899999999999995 69999997655 469999998874
No 248
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=72.14 E-value=18 Score=30.44 Aligned_cols=66 Identities=15% Similarity=0.291 Sum_probs=48.1
Q ss_pred chHHHHHHHHhhC--C--CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSE--N--GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~--~--~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..++..+|..|-. + +.++.++|..+++..=+. ...+...+..|+..+... ..+.+++++|+.+|..
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~------~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN------KDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC------CCCcCcHHHHHHHHHH
Confidence 3467788999987 4 789999999999752121 123577888888877522 2468999999998765
No 249
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=70.68 E-value=16 Score=31.39 Aligned_cols=65 Identities=17% Similarity=0.370 Sum_probs=48.2
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~---~-~~~~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.++...|..|.. + +.++.++|+..|+..-++ ...+.+++..++..+... ..+.++++.|..++.+
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~------~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN------RDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHH
Confidence 468889999964 3 689999999999863221 135778888898876421 3468999999988764
No 250
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=67.71 E-value=15 Score=38.89 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=60.4
Q ss_pred CCcccceeeeccCcccc---cCCC-------CCCCCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCccc------
Q 007399 112 TAPVSHYFIYTGHNSYL---TGNQ-------LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------ 175 (605)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~g~Q-------l~g~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlt------ 175 (605)
+.||++-.|=-|||+.- .+.- -.+.+--.....=|..|+|-+.|-+=-..+ ++-.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~-~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHG-GELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCC-CcEEEEecccccccccCc
Confidence 57999999999999852 2221 112222334567789999998888743222 356788886532
Q ss_pred ccchHHHHHHHHhhhhhccCCCceEEEec
Q 007399 176 APVELIKCLRSIKEYAFVASEYPVVITLE 204 (605)
Q Consensus 176 s~i~f~dvi~aI~~~AF~~S~yPvIlSlE 204 (605)
+..+|.|||+.|+++.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999999743332333777765
No 251
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=66.31 E-value=11 Score=35.80 Aligned_cols=63 Identities=16% Similarity=0.338 Sum_probs=46.6
Q ss_pred HHHHHHHhh----CC-CCcCHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 27 VKSMFDQYS----EN-GTMTVDHLHRFLIEVQKE-DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 27 i~~if~~~~----~~-~~~~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
|+.+|..|+ .+ ..|+-..|.+++++.+=- ..++..++.-|+.++... ..+.|++++|...|.-
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k------~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK------GARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S------S-SEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC------CCcccCHHHHHHHHHH
Confidence 578899994 33 889999999999998643 237889999999997622 1234999999988763
No 252
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=64.41 E-value=63 Score=34.89 Aligned_cols=99 Identities=12% Similarity=0.189 Sum_probs=69.3
Q ss_pred EEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecC-------CccEE
Q 007399 478 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-------ELALL 550 (605)
Q Consensus 478 L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~p-------ela~L 550 (605)
+-|.|+.|.+.+.. + .-...|+..+-| ....|-.+..+-.|.||..+.|.+..- +-.-|
T Consensus 2 ivl~i~egr~F~~~-~--------~~~~vv~a~~ng-----~~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~tPi 67 (340)
T PF12416_consen 2 IVLSILEGRNFPQR-P--------RHPIVVEAKFNG-----ESLETDPVPHTESPQFNTELAWECDRKALKQHRLQRTPI 67 (340)
T ss_pred EEEEEecccCCCCC-C--------CccEEEEEEeCC-----ceeeecCCCCCCCceeecceeeeccHHHHHHhhccCCce
Confidence 45788888887531 0 012244445444 455677777778899999998886532 22568
Q ss_pred EEEEEecc-CCCCCCccEEEEEECCcc---CCc-----cEEEEccCCCC
Q 007399 551 RIEVHEYD-MSEKDDFGGQTCLPVSEL---KQG-----IRAVPLHDRKG 590 (605)
Q Consensus 551 rf~V~D~D-~~~~ddflGq~~lpL~sL---r~G-----yR~IpL~d~~g 590 (605)
++..+..| ..+..+.+|...++|.+. ..| .+|.+|+..++
T Consensus 68 Kl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~~~ 116 (340)
T PF12416_consen 68 KLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSSSS 116 (340)
T ss_pred EEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEcccccc
Confidence 88888877 556688999999999999 555 78999998744
No 253
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=63.04 E-value=27 Score=34.41 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=43.9
Q ss_pred ceeeccccCCCCCCeeccEEEEeeec--CCccEEEEEEEeccCC--C-------CCCccEEEEEECCc----cCCccEEE
Q 007399 519 VMKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMS--E-------KDDFGGQTCLPVSE----LKQGIRAV 583 (605)
Q Consensus 519 ~k~kTkvv~nn~NPvWNEtf~F~v~~--pela~Lrf~V~D~D~~--~-------~ddflGq~~lpL~s----Lr~GyR~I 583 (605)
....|.+...+-+|.|+|++...+.. .+..-|+|+.++-+.. . ....+|-+.+||-. |..|...+
T Consensus 56 ~~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvsc~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~L 135 (185)
T cd08697 56 TSAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVSCDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTP 135 (185)
T ss_pred eEEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeeccccccccccCCCccceEEEEEEeeecCCCEEecCCEee
Confidence 34567777778899999998887653 3456899999986521 1 12346666667654 44555544
Q ss_pred Ecc
Q 007399 584 PLH 586 (605)
Q Consensus 584 pL~ 586 (605)
|..
T Consensus 136 pV~ 138 (185)
T cd08697 136 PVA 138 (185)
T ss_pred eEE
Confidence 443
No 254
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=62.17 E-value=35 Score=40.82 Aligned_cols=99 Identities=15% Similarity=0.173 Sum_probs=56.3
Q ss_pred ceEEEEEEeccccccCCCCCccCCCCCCCceEEEE--Ee-cCCCCcceeeccccCCCCCCeeccEEEEeeecCC---ccE
Q 007399 476 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVG--IA-GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LAL 549 (605)
Q Consensus 476 ~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~--i~-G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pe---la~ 549 (605)
+.++|+++++.+.-.+ ...|.+|.|+ +. |...=+....|.-+...-+|.||+.++|++...+ .|.
T Consensus 343 ~~frI~l~~is~~n~~---------~t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~Ar 413 (1076)
T KOG0904|consen 343 RPFRIKLVGISKVNLP---------ETVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMAR 413 (1076)
T ss_pred CceEEEEeeccccCCC---------cccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhhh
Confidence 4478888887755321 1123454444 33 3111112234544443467999999999987554 477
Q ss_pred EEEEEEecc----------------CCCCCCccEEEEEECC----ccCCccEEE
Q 007399 550 LRIEVHEYD----------------MSEKDDFGGQTCLPVS----ELKQGIRAV 583 (605)
Q Consensus 550 Lrf~V~D~D----------------~~~~ddflGq~~lpL~----sLr~GyR~I 583 (605)
|.|.|+..- ..+..-.+|++-+-|- .||.|-+.+
T Consensus 414 Lc~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~L 467 (1076)
T KOG0904|consen 414 LCLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVL 467 (1076)
T ss_pred heeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEE
Confidence 877776531 1122346777776654 467886544
No 255
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=59.01 E-value=39 Score=35.79 Aligned_cols=82 Identities=26% Similarity=0.348 Sum_probs=54.6
Q ss_pred HHHHhCCccEEEEEee---cCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCceEEEeccC----CCHHHHHHH
Q 007399 143 IRALQKGVRVIELDIW---PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKV 215 (605)
Q Consensus 143 ~~aL~~GCRcvElD~W---dG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H----c~~~qQ~~m 215 (605)
..=|..|.|..-|=+= +++| .+--|+||-+.| ++.-+|+.-|+++-=.+ +==||| ||.. -+..--..+
T Consensus 73 ~~QL~~GvRylDlRi~~~~~~~D-~~~~i~HGl~~~--~~v~~vL~ev~~Fl~~h-~eEVVi-L~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 73 REQLVAGVRYLDLRIGYKLMDPD-REFYICHGLFST--YPVLEVLNEVRQFLSEH-PEEVVI-LEFRHFFGMTEPHHRKL 147 (306)
T ss_pred HHHHhhcceEEEEEeeeccCCCC-cceEEEeecccc--ccHHHHHHHHHHHHHhC-CCEEEE-EeccchhccCccHHHHH
Confidence 3456789999776665 2233 235899995544 55588998888753222 222333 5543 356777788
Q ss_pred HHHHHHHhhccccC
Q 007399 216 AEMVTQTLGEILFT 229 (605)
Q Consensus 216 a~~~~~i~Gd~L~~ 229 (605)
...+++.||++|+.
T Consensus 148 ~~~ik~~~g~~l~~ 161 (306)
T KOG4306|consen 148 VLVIKQGFGDILCD 161 (306)
T ss_pred HHHHHHHhcccccC
Confidence 88899999999994
No 256
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=58.45 E-value=11 Score=44.87 Aligned_cols=97 Identities=12% Similarity=0.174 Sum_probs=71.8
Q ss_pred CCceEEEEEecCCCCcceeeccccCCC-CCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCcc-
Q 007399 503 PDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI- 580 (605)
Q Consensus 503 ~DPyV~V~i~G~p~D~~k~kTkvv~nn-~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~Gy- 580 (605)
.++|+.+.+.. ..-.+|..+.+. -+|.|.+.|+.-+... .+.+.|+|.+.+..+...++|.+.+|+-.+..|-
T Consensus 138 ~e~Ylt~~l~~----~~~~~t~~~~~f~e~s~~~f~~~~~~~h~-~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~ 212 (887)
T KOG1329|consen 138 LENYLTVVLHK----ARYRRTHVIYEFLENSRWSFSFDIGFAHK-AGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR 212 (887)
T ss_pred ccchheeeech----hhhhchhhhhcccccchhhhhcccccccc-ccEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence 47799888865 234467777777 5899999887665554 3689999999887766778899999998888774
Q ss_pred --EEEEccCCCCCcccC-eEEEEEEEE
Q 007399 581 --RAVPLHDRKGERYKS-VKLLMHFEF 604 (605)
Q Consensus 581 --R~IpL~d~~g~~l~~-atLlv~i~f 604 (605)
.+.++++.++.+... +++.+++.|
T Consensus 213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~ 239 (887)
T KOG1329|consen 213 IGGWFPILDNDGKPHQKGSNESLRLGF 239 (887)
T ss_pred ccceeeeeccCCccccCCcccceEEee
Confidence 467888888888744 444455554
No 257
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=57.75 E-value=30 Score=33.91 Aligned_cols=55 Identities=20% Similarity=0.178 Sum_probs=38.0
Q ss_pred eeeccccCCCCCCeeccEEEEeeecC--CccEEEEEEEeccCCCC------CCccEEEEEECC
Q 007399 520 MKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK------DDFGGQTCLPVS 574 (605)
Q Consensus 520 k~kTkvv~nn~NPvWNEtf~F~v~~p--ela~Lrf~V~D~D~~~~------ddflGq~~lpL~ 574 (605)
...|.+...|-+|.|+|++..++..+ +..-|+|+.++-+...+ ...+|-+.+||-
T Consensus 55 ~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs~~~k~~~~~~e~~~Gys~lPL~ 117 (179)
T cd08696 55 EAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHISCQKKQEGGSVETPIGYTWLPLL 117 (179)
T ss_pred eEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEeeccccccCCCccceEEEEEEeee
Confidence 45677777788999999988876543 45689999988554322 134666666654
No 258
>PTZ00183 centrin; Provisional
Probab=57.67 E-value=45 Score=30.50 Aligned_cols=63 Identities=16% Similarity=0.344 Sum_probs=45.1
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.++..+|..+-.+ +.++.++|..+|+... . ..+...+..++..+... ..+.+++.+|...+..
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~~------~~g~i~~~eF~~~~~~ 81 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDKD------GSGKIDFEEFLDIMTK 81 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcEeHHHHHHHHHH
Confidence 4566678777643 8899999999998653 2 24666777777776421 3467999999988764
No 259
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=56.47 E-value=11 Score=43.57 Aligned_cols=54 Identities=31% Similarity=0.533 Sum_probs=45.5
Q ss_pred eeccEEEEeeecCCc---cEEEEEEEeccCCCCCCccEEEEEECCc----cCCccEEEEcc
Q 007399 533 SWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVSE----LKQGIRAVPLH 586 (605)
Q Consensus 533 vWNEtf~F~v~~pel---a~Lrf~V~D~D~~~~ddflGq~~lpL~s----Lr~GyR~IpL~ 586 (605)
.|||=+++.+..+++ |.|.+++||........|+|+.++.+.. +++|..-++|.
T Consensus 78 ~wnewLtlpvky~dLt~~a~l~itiW~~n~~~~~~~vg~~t~~lf~k~~~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 78 NWNEWLTLPVKYSDLTRNAQLAITIWDVNGPKKAVFVGGTTVSLFGKYGMLKQGMQDLKLW 138 (843)
T ss_pred chhhhhccccccccccccceEEEEEEecCCCceeeeccceEEEeecccchHhhhhhhcccc
Confidence 399999999998887 7899999998877778899999888764 68898888775
No 260
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=54.80 E-value=35 Score=35.74 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=51.9
Q ss_pred CCCCCCCCChHHHHHHHhC----C-ccEEEEEeecCCCCCCceEeeC-Cccc-ccchHHHHHHHHhhhhhccCCCceEEE
Q 007399 130 GNQLNSDCSDVPIIRALQK----G-VRVIELDIWPNSKKDNVDVLHG-GTMT-APVELIKCLRSIKEYAFVASEYPVVIT 202 (605)
Q Consensus 130 g~Ql~g~SS~e~Y~~aL~~----G-CRcvElD~WdG~~~~~piv~HG-~Tlt-s~i~f~dvi~aI~~~AF~~S~yPvIlS 202 (605)
+=|+.| ++.+.|.++.++ | +..|||.|.- |..-|| ..+- ..=...+++++|++.. ++||++-
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c------P~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 163 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC------PNVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVK 163 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC------CCCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEE
Confidence 345555 468899877754 8 9999999864 222353 2222 2335689999999864 7999988
Q ss_pred eccCCCHHHHHHHHHHHHH
Q 007399 203 LEDHLTPDLQAKVAEMVTQ 221 (605)
Q Consensus 203 lE~Hc~~~qQ~~ma~~~~~ 221 (605)
|-. +.+.-..+|+.+.+
T Consensus 164 l~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 164 LTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred cCC--CchhHHHHHHHHHH
Confidence 753 33455567776655
No 261
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=50.55 E-value=18 Score=24.46 Aligned_cols=26 Identities=12% Similarity=0.524 Sum_probs=22.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~ 51 (605)
||..+|+.|=.+ +.++.++|...|+.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 688999999644 89999999999864
No 262
>PTZ00184 calmodulin; Provisional
Probab=48.65 E-value=73 Score=28.57 Aligned_cols=63 Identities=14% Similarity=0.342 Sum_probs=44.8
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
+++...|..+-.+ +.++.++|..+|... +. ..+.+.+..++..+... ..+.++++.|..+|..
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~-~~~~~~~~~~~~~~d~~------~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQ-NPTEAELQDMINEVDAD------GNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CC-CCCHHHHHHHHHhcCcC------CCCcCcHHHHHHHHHH
Confidence 4566677776433 889999999999754 33 24566777887776521 2357999999998875
No 263
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=46.88 E-value=20 Score=24.13 Aligned_cols=26 Identities=15% Similarity=0.473 Sum_probs=21.3
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~ 51 (605)
|+..+|+.|-.+ ..|+.++|+.+|++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999644 89999999999973
No 264
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=43.37 E-value=95 Score=32.13 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=58.1
Q ss_pred cCCCCCCCCChHHHHHHH----hCCccEEEEEeecCCCCCCceEeeCCc-ccccchHHHHHHHHhhhhhccCCCceEEEe
Q 007399 129 TGNQLNSDCSDVPIIRAL----QKGVRVIELDIWPNSKKDNVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITL 203 (605)
Q Consensus 129 ~g~Ql~g~SS~e~Y~~aL----~~GCRcvElD~WdG~~~~~piv~HG~T-lts~i~f~dvi~aI~~~AF~~S~yPvIlSl 203 (605)
++-|+.|. +.+.|.++. ..|+..|||+|-. + ..-.|.. +...=...+++++|++.. +.||++-|
T Consensus 101 vi~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~c-P-----~~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 169 (289)
T cd02810 101 LIASVGGS-SKEDYVELARKIERAGAKALELNLSC-P-----NVGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKL 169 (289)
T ss_pred EEEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCC-C-----CCCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEe
Confidence 44566553 555554433 4599999999964 2 1122333 233345688999999754 79999998
Q ss_pred ccCCCHHHHHHHHHHHHHHhhccccC
Q 007399 204 EDHLTPDLQAKVAEMVTQTLGEILFT 229 (605)
Q Consensus 204 E~Hc~~~qQ~~ma~~~~~i~Gd~L~~ 229 (605)
-..-+.+.=..+|+.+.+.=-|.|.+
T Consensus 170 ~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 170 SPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 88777777777888776643355544
No 265
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=40.83 E-value=35 Score=20.63 Aligned_cols=26 Identities=15% Similarity=0.478 Sum_probs=20.6
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~ 51 (605)
|+..+|..+-.+ +.++.++|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467788888644 78999999998864
No 266
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=40.22 E-value=84 Score=28.13 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=44.4
Q ss_pred eeccccCCCCCCeeccEEEEeeecCCc-------cEEEEEEEeccCCCCCCccEEEEEECCccC--Cc---cEEEEccCC
Q 007399 521 KKTKTLEDNWIPSWNEEFEFPLSVPEL-------ALLRIEVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDR 588 (605)
Q Consensus 521 ~kTkvv~nn~NPvWNEtf~F~v~~pel-------a~Lrf~V~D~D~~~~ddflGq~~lpL~sLr--~G---yR~IpL~d~ 588 (605)
..|.++. +.+|.+|-+-.|.|...++ ..++++++..- ...-..+|.+.+++..+- .| +-.+.|.+.
T Consensus 13 q~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~-g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~g~ 90 (107)
T PF11618_consen 13 QTTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL-GSDFETLAAGQISLRPLLESNGERIHGSATLVGV 90 (107)
T ss_dssp EE---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE--SS-EEEEEEEEE--SHHHH--S--EEEEEEE-BS
T ss_pred eccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec-cCCeEEEEEEEeechhhhcCCCceEEEEEEEecc
Confidence 4466554 7899999999999876553 46888888754 333578999999999874 34 346788999
Q ss_pred CCCcccCeEEEEEEE
Q 007399 589 KGERYKSVKLLMHFE 603 (605)
Q Consensus 589 ~g~~l~~atLlv~i~ 603 (605)
+|+ ..++|-..+.
T Consensus 91 ~~~--~~g~l~y~~r 103 (107)
T PF11618_consen 91 SGE--DFGTLEYWIR 103 (107)
T ss_dssp SS---TSEEEEEEEE
T ss_pred CCC--eEEEEEEEEE
Confidence 998 4567765544
No 267
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=39.18 E-value=1.1e+02 Score=28.39 Aligned_cols=64 Identities=22% Similarity=0.443 Sum_probs=48.8
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 24 r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
..||.+.|+-|-.+ +++|+++|+.+|...= + ..+.+.+..+|...-. .....+++++|...+..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg-~-~~~~~e~~~mi~~~d~------d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLG-E-KLTDEECKEMIREVDV------DGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC-C-cCCHHHHHHHHHhcCC------CCCCeEeHHHHHHHHhc
Confidence 45899999999744 8999999999999753 3 3678888888876542 13356789999988764
No 268
>PF14186 Aida_C2: Cytoskeletal adhesion; PDB: 2QZQ_A 2QZ5_A.
Probab=38.98 E-value=1.4e+02 Score=28.34 Aligned_cols=121 Identities=18% Similarity=0.148 Sum_probs=57.8
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCC--cceeeccccCCC-CC-CeeccEEEEeee---cCCc
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD--TVMKKTKTLEDN-WI-PSWNEEFEFPLS---VPEL 547 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D--~~k~kTkvv~nn-~N-PvWNEtf~F~v~---~pel 547 (605)
...|.|+|-... + .+.....|||+.|++....+. +..+.|.+.... .| =.||.+.+.+.. .|+-
T Consensus 12 ~t~l~v~Iekig-l--------kda~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G 82 (147)
T PF14186_consen 12 MTYLSVFIEKIG-L--------KDASQYIDPYFTVSVKDGNGKDVEPPQDTPVGSRREDNYVHFNNTVHLQTPLEKLPKG 82 (147)
T ss_dssp --EEEEEEEEEE----------TTGGG-EEEEEEEEEE-TTS-BSS--EE--S-SEEETTEEEEEEEEE-SS-GGGS-TT
T ss_pred CceEEEEEEEEE-E--------CChHHccCCeEEEEEECCCCCCccccccCCCcccccCCEEEEcccEEEcCCHHHCCCc
Confidence 345777776643 3 122345789999998753322 123445544211 23 345766666543 3455
Q ss_pred cEEEEEEEeccCCC-CCCccEEEEEECCccCCccEEEEcc----CCCCCc---ccCeEEEEEEEE
Q 007399 548 ALLRIEVHEYDMSE-KDDFGGQTCLPVSELKQGIRAVPLH----DRKGER---YKSVKLLMHFEF 604 (605)
Q Consensus 548 a~Lrf~V~D~D~~~-~ddflGq~~lpL~sLr~GyR~IpL~----d~~g~~---l~~atLlv~i~f 604 (605)
+-|.|+++++-... +-...|++.++++.+++|--.++|+ |...+. +....|.+|+.+
T Consensus 83 aai~fE~kH~K~kk~k~S~kcw~fme~dei~~g~~~lely~KPtD~~rkkl~llt~k~~yl~l~~ 147 (147)
T PF14186_consen 83 AAIFFEFKHYKPKKKKTSTKCWAFMELDEIKPGPVVLELYKKPTDFKRKKLKLLTKKPLYLHLTL 147 (147)
T ss_dssp -EEEEEEEEEETTTTCEEEEEEEEEEGGG--SEEEEE--EESS--TT--S--BS-SSS--EEEEE
T ss_pred eEEEEEEEeeeccceeeeeeEEEEEEhhhccCCceeeehhcCCcChhHhhhhhccCCCccEEEeC
Confidence 77889988865432 2346799999999999995555553 333332 333445566543
No 269
>PRK09071 hypothetical protein; Validated
Probab=38.68 E-value=23 Score=37.98 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=36.5
Q ss_pred CCCCCC--hHHHHHHHhCCccEE----EEE--eecCCCC---------------CCceEeeCC-cccccc-hHHHHHHHH
Q 007399 133 LNSDCS--DVPIIRALQKGVRVI----ELD--IWPNSKK---------------DNVDVLHGG-TMTAPV-ELIKCLRSI 187 (605)
Q Consensus 133 l~g~SS--~e~Y~~aL~~GCRcv----ElD--~WdG~~~---------------~~piv~HG~-Tlts~i-~f~dvi~aI 187 (605)
++|++- +.++.+|++.-|.-+ .|| |++|.++ +-||+.||. ..||+- .-.||++++
T Consensus 52 ~kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDvLeaL 131 (323)
T PRK09071 52 VKEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQLLEAL 131 (323)
T ss_pred HcCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHHHHHC
Confidence 345554 447788888665433 366 7888763 347999997 456664 378888876
Q ss_pred h
Q 007399 188 K 188 (605)
Q Consensus 188 ~ 188 (605)
.
T Consensus 132 G 132 (323)
T PRK09071 132 G 132 (323)
T ss_pred C
Confidence 3
No 270
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=37.44 E-value=63 Score=25.15 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=32.4
Q ss_pred cCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHH
Q 007399 40 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (605)
Q Consensus 40 ~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (605)
|+..++++||+...= .++.+.|..||++... -+.+.|..++|..|.
T Consensus 2 msf~Evk~lLk~~NI--~~~~~yA~~LFq~~D~------s~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNI--EMDDEYARQLFQECDK------SQSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-S------SSSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHcc--CcCHHHHHHHHHHhcc------cCCCCccHHHHHHHH
Confidence 788999999996554 3678899999988642 134678888888775
No 271
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=36.03 E-value=1.3e+02 Score=28.91 Aligned_cols=61 Identities=11% Similarity=0.313 Sum_probs=45.1
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 26 ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
++++.|..+..+ +.|+..+|...|+.-+.. .+.+.+..|++.+- . +...+++..|+..|-.
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d------~-~~~~idf~~Fl~~ms~ 83 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEID------A-GNETVDFPEFLTVMSV 83 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhcc------C-CCCccCHHHHHHHHHH
Confidence 344445555543 899999999999966553 68888888888754 1 3478999999998764
No 272
>PRK08136 glycosyl transferase family protein; Provisional
Probab=34.93 E-value=34 Score=36.58 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=19.5
Q ss_pred CceEeeCC-cccccchHHHHHHHHh
Q 007399 165 NVDVLHGG-TMTAPVELIKCLRSIK 188 (605)
Q Consensus 165 ~piv~HG~-Tlts~i~f~dvi~aI~ 188 (605)
-||+.||. ..++++.-.||+++..
T Consensus 110 ~~V~kHGnr~vssk~gsadvleaLG 134 (317)
T PRK08136 110 VPVLVHGVSEDPTRVTSAEIFEALG 134 (317)
T ss_pred CeEEEECCCCCCCcccHHHHHHHcC
Confidence 48999996 5778888899998864
No 273
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=34.52 E-value=1.1e+02 Score=29.41 Aligned_cols=66 Identities=18% Similarity=0.393 Sum_probs=51.5
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
.+|.||..-|+-|=-+ .+++..+|++-|.. =++ ..+.+.+..|+..+... +.+.++++.|...+..
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~-lge-~~~deev~~ll~~~d~d------~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKS-LGE-RLSDEEVEKLLKEYDED------GDGEIDYEEFKKLIKD 156 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHh-hcc-cCCHHHHHHHHHhcCCC------CCceEeHHHHHHHHhc
Confidence 4678999999999644 89999999999984 344 46888899998887632 3467999999987665
No 274
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=34.44 E-value=1.6e+02 Score=28.74 Aligned_cols=97 Identities=20% Similarity=0.288 Sum_probs=62.8
Q ss_pred chHHHHHHHHhhCC---CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc--CC-
Q 007399 24 PDAVKSMFDQYSEN---GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG--DI- 97 (605)
Q Consensus 24 r~ei~~if~~~~~~---~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s--~~- 97 (605)
|.++..+|.+..+. ..++++.|..-+.+.=+....+.+.|..+|...-..+ ....+|+.+|..||.- .+
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~k-----~~~~iT~~Df~~F~A~FGP~~ 92 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTPK-----NTNVITIPDFYKFLARFGPEE 92 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS--S-----S-SEEEHHHHHHHHHHSSSGG
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcCC-----CCceeeHHHHHHHHHHhCCch
Confidence 56788999999876 4799998888777653233357788888888765221 2356899999888653 22
Q ss_pred ----------------CCCC--CCCCCcccCCCCcccceeeeccCccc
Q 007399 98 ----------------NPPL--SPTPVVHHDMTAPVSHYFIYTGHNSY 127 (605)
Q Consensus 98 ----------------n~~~--~~~~~v~qDM~~PLs~YfI~SSHNTY 127 (605)
+.-+ + ....+-|+++++-||=+.=||=.
T Consensus 93 tim~KI~~lL~~s~~~~~wl~~~--Pd~~~~~~~~i~g~f~~t~~NC~ 138 (181)
T PF11422_consen 93 TIMEKIHSLLCSSNNDGQWLYFD--PDAEKNFDNSISGYFDNTEPNCF 138 (181)
T ss_dssp GHHHHHHHHHHHHHTTTS-B-SS--SSTTTTTCCS-EEEEESSSTTEE
T ss_pred hHHHHHHHHHHhhccCCcceeeC--chhhcccCcccceeeccCCCceE
Confidence 2222 2 13556788899999988877743
No 275
>PTZ00466 actin-like protein; Provisional
Probab=32.73 E-value=56 Score=35.63 Aligned_cols=48 Identities=21% Similarity=0.210 Sum_probs=40.2
Q ss_pred chHHHHHHHHhhhhhc-----cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 007399 178 VELIKCLRSIKEYAFV-----ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (605)
Q Consensus 178 i~f~dvi~aI~~~AF~-----~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd 225 (605)
|.=.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 83 v~dwd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 83 IENWNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred ECCHHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 4447888888888883 36899999977888899999999999999985
No 276
>PTZ00452 actin; Provisional
Probab=32.40 E-value=57 Score=35.46 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=40.6
Q ss_pred cchHHHHHHHHhhhhhcc------CCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 007399 177 PVELIKCLRSIKEYAFVA------SEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (605)
Q Consensus 177 ~i~f~dvi~aI~~~AF~~------S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd 225 (605)
.|.=.|.++.|=+|+|.. +++||+++=-..++..++++||++|=|.|+-
T Consensus 75 ~I~dwd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~v 129 (375)
T PTZ00452 75 IINSWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNT 129 (375)
T ss_pred EEcCHHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCC
Confidence 444478888888898843 5899999965777899999999999999986
No 277
>PLN02591 tryptophan synthase
Probab=32.21 E-value=33 Score=35.36 Aligned_cols=93 Identities=22% Similarity=0.222 Sum_probs=54.7
Q ss_pred CCCChHHH---HHHH-hCCccEEEEEee-cCCCCCCceEeeC--CcccccchHHHHHHHHhhhhhccCCCceEEEeccCC
Q 007399 135 SDCSDVPI---IRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHL 207 (605)
Q Consensus 135 g~SS~e~Y---~~aL-~~GCRcvElD~W-dG~~~~~piv~HG--~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hc 207 (605)
|.-+.|.. +++| ..||-.|||.+= .-|--|.|+|-.- ..|..-++++++++.+++.. ...+-|+||- -..
T Consensus 11 G~P~~e~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~ilm--~Y~ 87 (250)
T PLN02591 11 GDPDLDTTAEALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVLF--TYY 87 (250)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEEE--ecc
Confidence 45555544 4444 579999999873 1122344666543 45777788999999999977 4467896632 233
Q ss_pred CHHHHH---HHHHHHHHHhhccccCC
Q 007399 208 TPDLQA---KVAEMVTQTLGEILFTP 230 (605)
Q Consensus 208 ~~~qQ~---~ma~~~~~i~Gd~L~~~ 230 (605)
++-.|. +..+-+++.=-|-|+.|
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~Gviip 113 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVP 113 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeC
Confidence 443343 33344444333445554
No 278
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=31.75 E-value=1.7e+02 Score=27.16 Aligned_cols=64 Identities=16% Similarity=0.330 Sum_probs=51.4
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccC
Q 007399 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (605)
Q Consensus 25 ~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (605)
.++..+|..+-.+ +.++..+|...|+.--.. .+.+....+++++... ....++++.|...|...
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~d------g~g~I~~~eF~~l~~~~ 73 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDLD------GDGTIDFEEFLDLMEKL 73 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCCC------CCCeEcHHHHHHHHHhh
Confidence 4788889998533 899999999999986554 5888899999887521 34679999999999874
No 279
>PTZ00281 actin; Provisional
Probab=31.01 E-value=56 Score=35.50 Aligned_cols=50 Identities=18% Similarity=0.161 Sum_probs=40.9
Q ss_pred cchHHHHHHHHhhhhhc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhcc
Q 007399 177 PVELIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (605)
Q Consensus 177 ~i~f~dvi~aI~~~AF~------~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~ 226 (605)
.|.=.|..+.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||--
T Consensus 76 ~i~dwd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp 131 (376)
T PTZ00281 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131 (376)
T ss_pred EEcCHHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCc
Confidence 34447888888888884 358999999777788999999999999999853
No 280
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=30.97 E-value=31 Score=28.50 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=27.3
Q ss_pred CCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHc
Q 007399 21 SEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQ 53 (605)
Q Consensus 21 ~~~r~ei~~if~~~~~~-~~~~~~~~~~Fl~~~Q 53 (605)
..+.++|.+-|+..+++ .++|.++|++-|.-+|
T Consensus 2 ~~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 2 QDSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp SSTCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 45678999999999988 9999999999886544
No 281
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=29.79 E-value=66 Score=34.66 Aligned_cols=47 Identities=26% Similarity=0.351 Sum_probs=36.7
Q ss_pred hHHHHHHHHhhhhhc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 007399 179 ELIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (605)
Q Consensus 179 ~f~dvi~aI~~~AF~------~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd 225 (605)
.=.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-|.||-
T Consensus 71 ~~~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 71 VDWDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp SSHHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred ccccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 335777777777776 57899999999999999999999999999985
No 282
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=28.75 E-value=2e+02 Score=30.79 Aligned_cols=77 Identities=17% Similarity=0.159 Sum_probs=46.5
Q ss_pred cceEEEEEEeccccccCCCCCccCCCCCCCceEEEEEecCCCCcceeeccccCCCCCCeeccEEEEeeecCCccEEEEEE
Q 007399 475 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 554 (605)
Q Consensus 475 ~~~L~V~Visaq~L~~~~~~~~~d~~s~~DPyV~V~i~G~p~D~~k~kTkvv~nn~NPvWNEtf~F~v~~pela~Lrf~V 554 (605)
.+.|-|++..|++|..... ...-..+.|+.++.. ...+.||.+.....-=.|.|+|+.++...+ .+.+.|
T Consensus 50 tGiL~~H~~~GRGLr~~p~----~kglt~~~ycVle~d----rqh~aRt~vrs~~~~f~w~e~F~~Dvv~~~--vl~~lv 119 (442)
T KOG1452|consen 50 TGILYFHAYNGRGLRMTPQ----QKGLTVCFYCVLEPD----RQHPARTRVRSSGPGFAWAEDFKHDVVNIE--VLHYLV 119 (442)
T ss_pred cceEEEEEecccccccChh----ccCceeeeeeeeeec----ccCccccccccCCCCccchhhceeecccce--eeeEEE
Confidence 4568889999999865211 112234556655542 233445555443344469999998876543 467778
Q ss_pred EeccCCC
Q 007399 555 HEYDMSE 561 (605)
Q Consensus 555 ~D~D~~~ 561 (605)
|.++...
T Consensus 120 ySW~pq~ 126 (442)
T KOG1452|consen 120 YSWPPQR 126 (442)
T ss_pred eecCchh
Confidence 8877543
No 283
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=28.57 E-value=2.3e+02 Score=25.66 Aligned_cols=61 Identities=16% Similarity=0.259 Sum_probs=42.4
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHcc
Q 007399 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (605)
Q Consensus 23 ~r~ei~~if~~~~~~--~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (605)
-+.+|.-.|..+=.+ +.|+.++|..+. . . .....+..+|+.+-. .+.+.||+++|...|.-
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~------n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDL------DKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCC------CCCCCCCHHHHHHHHhC
Confidence 345688889998644 899999999987 1 1 123445566666531 13478999999999843
No 284
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=28.47 E-value=94 Score=31.35 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=32.8
Q ss_pred ccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhc
Q 007399 150 VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFV 193 (605)
Q Consensus 150 CRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~ 193 (605)
+=++-||+.+| -.++++||.-.+.+...+.++...+..+.
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~~ 162 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGAG 162 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-S
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCCc
Confidence 34556999995 25899999999999999999999988744
No 285
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=28.01 E-value=1.7e+02 Score=28.18 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=46.5
Q ss_pred CceEEEEEecCCCCcceeecccc--CCCCCCeeccEEEEeee-cCCccEEEEEEEeccCCCCCCccEEEEEECCccC
Q 007399 504 DFYARVGIAGVPADTVMKKTKTL--EDNWIPSWNEEFEFPLS-VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 577 (605)
Q Consensus 504 DPyV~V~i~G~p~D~~k~kTkvv--~nn~NPvWNEtf~F~v~-~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr 577 (605)
.-|++|.+-+ ..-.+|+.. ..+|.=.+|+.|.+++. .|+ .|.+.||.... ..+..|+++.+|+-...
T Consensus 38 ~~~ikl~~N~----k~V~~T~~~~l~~dF~v~f~~~f~v~i~~~Pe--si~l~i~E~~~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFND----KEVSRTRSRPLWSDFRVHFNEIFNVQITRWPE--SIKLEIYEKSG-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECC----EEEEeeeeEecCCCeEEeccCEEEEEEecCCC--EEEEEEEEccC-ccceEEEEEEeeCCCCc
Confidence 3478887754 223345443 34466778999999875 453 68899998776 55889999999976543
No 286
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=27.25 E-value=44 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=21.5
Q ss_pred ccCcccccCCCCCCCCChHHHHHHHhCCccEEE
Q 007399 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIE 154 (605)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~e~Y~~aL~~GCRcvE 154 (605)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 448899987 45556899999999998884
No 287
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=26.88 E-value=64 Score=30.59 Aligned_cols=65 Identities=22% Similarity=0.357 Sum_probs=44.8
Q ss_pred CCCCCChHHHHHHHhCCcc--EEEEEeecCC-------------CCCCceEeeCCccc-ccchHHHHHHHHhhhhhccCC
Q 007399 133 LNSDCSDVPIIRALQKGVR--VIELDIWPNS-------------KKDNVDVLHGGTMT-APVELIKCLRSIKEYAFVASE 196 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCR--cvElD~WdG~-------------~~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S~ 196 (605)
+.|.-+.+.+.+.|+.-|. -++++|.-.. ++-..||.--+.+| ++|.++|+++++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 5688889998888877555 5678886311 01123555545665 889999999887 5
Q ss_pred CceEEEeccCCC
Q 007399 197 YPVVITLEDHLT 208 (605)
Q Consensus 197 yPvIlSlE~Hc~ 208 (605)
.|+ +|+|.|
T Consensus 94 ~P~---VEVHiS 102 (146)
T PRK05395 94 IPV---IEVHLS 102 (146)
T ss_pred CCE---EEEecC
Confidence 675 599987
No 288
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=26.27 E-value=73 Score=34.18 Aligned_cols=46 Identities=22% Similarity=0.277 Sum_probs=37.9
Q ss_pred HHHHHHHHhhhhhc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 007399 180 LIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (605)
Q Consensus 180 f~dvi~aI~~~AF~------~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd 225 (605)
=.|+++.|=+|.|. .+++||+|+.=...+..+++.|+++|-+.||-
T Consensus 73 d~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 73 NWDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred CHHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 36788888888886 25799999866667799999999999999984
No 289
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins. PKN is a lipid-activated serine/threonine kinase. It is a member of the protein kinase C (PKC) superfamily, but lacks a C1 domain. There are at least 3 different isoforms of PKN (PRK1/PKNalpha/PAK1; PKNbeta, and PRK2/PAK2/PKNgamma). The C-terminal region contains the Ser/Thr type protein kinase domain, while the N-terminal region of PKN contains three antiparallel coiled-coil (ACC) finger domains which are relatively rich in charged residues and contain a leucine zipper-like sequence. These domains binds to the small GTPase RhoA. Following these domains is a C2-like domain. Its C-terminal part functions as an auto-inhibitory region. PKNs are not activated by classical PKC activators such as diacylglycerol, phorbol ester or Ca2+, but instead are activated by phospholipids and unsaturated fatty acids. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 struct
Probab=25.52 E-value=2.1e+02 Score=25.24 Aligned_cols=47 Identities=17% Similarity=0.281 Sum_probs=33.8
Q ss_pred CCCeeccEEEEeeecCCccEEEEEEEeccCCCCCCccEEEEEECCccCCccE
Q 007399 530 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIR 581 (605)
Q Consensus 530 ~NPvWNEtf~F~v~~pela~Lrf~V~D~D~~~~ddflGq~~lpL~sLr~GyR 581 (605)
-+..|+++|++.+.-. .-|.+.|+-.|. ..+.|-..+.|...+-|++
T Consensus 31 s~q~WDQ~Fti~LdRs--RELEI~VywrD~---RslCav~~lrLEd~~~~~~ 77 (98)
T cd08687 31 SNQAWDQSFTLELERS--RELEIAVYWRDW---RSLCAVKFLKLEDERHEVQ 77 (98)
T ss_pred ccccccceeEEEeecc--cEEEEEEEEecc---hhhhhheeeEhhhhcccce
Confidence 3678999999988532 458899988774 4577777888887544443
No 290
>PTZ00004 actin-2; Provisional
Probab=25.14 E-value=93 Score=33.76 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=37.4
Q ss_pred HHHHHHHhhhhhc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhcc
Q 007399 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (605)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd~ 226 (605)
.|+++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 6777777777774 368999998666778888899999999999854
No 291
>COG1590 Uncharacterized conserved protein [Function unknown]
Probab=24.91 E-value=25 Score=35.06 Aligned_cols=54 Identities=15% Similarity=0.207 Sum_probs=37.7
Q ss_pred CCChHHHHHHHhCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhh----hhccCCCceE
Q 007399 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY----AFVASEYPVV 200 (605)
Q Consensus 136 ~SS~e~Y~~aL~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~----AF~~S~yPvI 200 (605)
.||+.|=|.++..+ +-||+.+..-....|- ++++.+|.+|++.. +|....=|++
T Consensus 44 TSSCSGRI~V~e~~------~~g~k~gs~wl~K~H~-----~~~~~ev~ealk~~~~~~iwl~~~ppIl 101 (208)
T COG1590 44 TSSCSGRISVMEEP------SPGDKPGSRWLGKWHR-----PISLDEVLEALKKAREGYIWLKVQPPIL 101 (208)
T ss_pred eccccceEEEEecc------cCCCCCCCEEEEEecC-----cCCHHHHHHHHHhcccceEEEEeeCCEE
Confidence 67777777777666 7899865432345565 69999999999887 5666655543
No 292
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=22.42 E-value=2.5e+02 Score=29.15 Aligned_cols=78 Identities=18% Similarity=0.286 Sum_probs=48.5
Q ss_pred CCCCCCCChHHHHHHHh----CCccEEEEEeecCCCCCCceEee-CCc-ccccchHHHHHHHHhhhhhccCCCceEEEec
Q 007399 131 NQLNSDCSDVPIIRALQ----KGVRVIELDIWPNSKKDNVDVLH-GGT-MTAPVELIKCLRSIKEYAFVASEYPVVITLE 204 (605)
Q Consensus 131 ~Ql~g~SS~e~Y~~aL~----~GCRcvElD~WdG~~~~~piv~H-G~T-lts~i~f~dvi~aI~~~AF~~S~yPvIlSlE 204 (605)
=||.| ++++.|.++.. .|+..|||.+.- |..-+ |.. +.+.=.+.+++++|++.. +.||++-|-
T Consensus 94 vsi~g-~~~~~~~~~a~~~~~~G~d~iElN~~c------P~~~~~g~~~~~~~~~~~eiv~~vr~~~----~~Pv~vKl~ 162 (296)
T cd04740 94 ASIAG-STVEEFVEVAEKLADAGADAIELNISC------PNVKGGGMAFGTDPEAVAEIVKAVKKAT----DVPVIVKLT 162 (296)
T ss_pred EEEec-CCHHHHHHHHHHHHHcCCCEEEEECCC------CCCCCCcccccCCHHHHHHHHHHHHhcc----CCCEEEEeC
Confidence 35555 45777766654 499999999874 22222 222 234455679999999864 799998764
Q ss_pred cCCCHHHHHHHHHHHHH
Q 007399 205 DHLTPDLQAKVAEMVTQ 221 (605)
Q Consensus 205 ~Hc~~~qQ~~ma~~~~~ 221 (605)
.. .+.-..+|+.+.+
T Consensus 163 ~~--~~~~~~~a~~~~~ 177 (296)
T cd04740 163 PN--VTDIVEIARAAEE 177 (296)
T ss_pred CC--chhHHHHHHHHHH
Confidence 32 2334455665554
No 293
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=22.39 E-value=1.8e+02 Score=30.42 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=38.8
Q ss_pred ccCCCCCCCCChHHHHHHHhCCccEEEEEe--ecCCCCCCceEeeCCcccc--cch----HHHHHHHHhhh
Q 007399 128 LTGNQLNSDCSDVPIIRALQKGVRVIELDI--WPNSKKDNVDVLHGGTMTA--PVE----LIKCLRSIKEY 190 (605)
Q Consensus 128 L~g~Ql~g~SS~e~Y~~aL~~GCRcvElD~--WdG~~~~~piv~HG~Tlts--~i~----f~dvi~aI~~~ 190 (605)
-+||-+. ++++.-.||..|+-.||+|+ |++. .+=..|||..-++ .++ |.+.++.+++.
T Consensus 2 ~iaHmVn---~~~~v~~~l~~GANaiE~Dv~f~~~~--~~~~~~Hg~pcdc~r~c~~~~~f~~~l~~~r~~ 67 (265)
T cd08576 2 AIAHMVN---DLEGVDDALDHGANAIEIDVTFWSNG--TGWWADHDVPCDCFRGCTAREMFDEILDYRRNG 67 (265)
T ss_pred cchhhhc---cHHHHHHHHHcCCCceeEEEEEccCC--cEEEeeCCCccccccCCcHHHHHHHHHHHHHhc
Confidence 3444444 47888999999999999999 5432 2337899976555 344 55555555554
No 294
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=22.14 E-value=80 Score=29.74 Aligned_cols=66 Identities=17% Similarity=0.307 Sum_probs=45.8
Q ss_pred CCCCCChHHHHHHHhCCcc--EEEEEeecCC-------------CCCCceEeeCCccc-ccchHHHHHHHHhhhhhccCC
Q 007399 133 LNSDCSDVPIIRALQKGVR--VIELDIWPNS-------------KKDNVDVLHGGTMT-APVELIKCLRSIKEYAFVASE 196 (605)
Q Consensus 133 l~g~SS~e~Y~~aL~~GCR--cvElD~WdG~-------------~~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S~ 196 (605)
+.|.-+.+.+.+.|+.-|+ -+|++|.-.. ++-..||.--+.+| ++|.++|++.++ .
T Consensus 20 iYG~~tl~~i~~~l~~~a~~~g~~v~~~QSN~Egelid~I~~a~~~~dgiIINpga~THtSvAi~DAl~~~--------~ 91 (140)
T cd00466 20 IYGTTTLADIEALLRELAAELGVEVEFFQSNHEGELIDWIHEARDGADGIIINPGAYTHTSIALRDALAAV--------S 91 (140)
T ss_pred cCCcCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHHhhccCcEEEEcchHHHHHHHHHHHHHHcC--------C
Confidence 5688888888888877665 5788886311 11124565555666 889999999887 3
Q ss_pred CceEEEeccCCCH
Q 007399 197 YPVVITLEDHLTP 209 (605)
Q Consensus 197 yPvIlSlE~Hc~~ 209 (605)
.|+ +|+|.|-
T Consensus 92 ~P~---VEVHiSN 101 (140)
T cd00466 92 IPV---IEVHISN 101 (140)
T ss_pred CCE---EEEecCC
Confidence 566 5999873
No 295
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=21.91 E-value=1.8e+02 Score=30.10 Aligned_cols=85 Identities=18% Similarity=0.204 Sum_probs=61.7
Q ss_pred ccCcccccCCCCCCCCCh-HHHHHHH-hCCccEEEEEeecCCCCCCceEeeCCcccccchHHHHHHHHhhhhhccCCCce
Q 007399 122 TGHNSYLTGNQLNSDCSD-VPIIRAL-QKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPV 199 (605)
Q Consensus 122 SSHNTYL~g~Ql~g~SS~-e~Y~~aL-~~GCRcvElD~WdG~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPv 199 (605)
+.+|.-|.|.-=+|+||. -+....+ ..|+|.||++=-+ =..+.++++.|+ ..+|+-
T Consensus 51 pannvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k~~-----------------L~~l~~l~~~l~-----~~~~kF 108 (249)
T PF05673_consen 51 PANNVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSKED-----------------LGDLPELLDLLR-----DRPYKF 108 (249)
T ss_pred CCcceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECHHH-----------------hccHHHHHHHHh-----cCCCCE
Confidence 467889999999999984 4554444 4599999995333 123567788877 456888
Q ss_pred EEEeccCCCHHHHHHHHHHHHHHhhccccC
Q 007399 200 VITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (605)
Q Consensus 200 IlSlE~Hc~~~qQ~~ma~~~~~i~Gd~L~~ 229 (605)
||=+.. .|.+..+.-.+.||.+|---|-.
T Consensus 109 Ilf~DD-LsFe~~d~~yk~LKs~LeGgle~ 137 (249)
T PF05673_consen 109 ILFCDD-LSFEEGDTEYKALKSVLEGGLEA 137 (249)
T ss_pred EEEecC-CCCCCCcHHHHHHHHHhcCcccc
Confidence 888875 77777777888899988544433
No 296
>PLN02641 anthranilate phosphoribosyltransferase
Probab=21.39 E-value=55 Score=35.40 Aligned_cols=99 Identities=13% Similarity=0.183 Sum_probs=58.9
Q ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCCCCHHHHHHHHccCCCCCCCCCCCcccCCCCcccceeeecc
Q 007399 44 HLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTG 123 (605)
Q Consensus 44 ~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~~~~v~qDM~~PLs~YfI~SS 123 (605)
+|+++|++...-..+|.+++.++++.+-+ . .+-.+--.||+.
T Consensus 3 ~~~~~l~~l~~g~~Lt~eEa~~~~~~il~---------~-~~~~qigAfL~a---------------------------- 44 (343)
T PLN02641 3 SFRQLIESLIQGTDLTEEEAEAALDFLLD---------D-ADEAQISAFLVL---------------------------- 44 (343)
T ss_pred cHHHHHHHHhCCCCCCHHHHHHHHHHHHc---------C-CCHHHHHHHHHH----------------------------
Confidence 36777777655557888888888777551 2 455555555553
Q ss_pred CcccccCCCCCCCCC--hHHHHHHHhCCccEE-----EEEeecCC--CC-----------------CCceEeeCC-cccc
Q 007399 124 HNSYLTGNQLNSDCS--DVPIIRALQKGVRVI-----ELDIWPNS--KK-----------------DNVDVLHGG-TMTA 176 (605)
Q Consensus 124 HNTYL~g~Ql~g~SS--~e~Y~~aL~~GCRcv-----ElD~WdG~--~~-----------------~~piv~HG~-Tlts 176 (605)
-.++|++. +.++.+|++.-++.+ -+| |-|. |+ +-||+.||. ..|+
T Consensus 45 -------lr~kget~eEiag~~~a~~~~~~~~~~~~~~~D-~~gtGGdg~~t~nist~aa~v~A~~G~~V~kHGnr~~ss 116 (343)
T PLN02641 45 -------LRAKGETFEEIAGLARAMIKRARKVDGLVDAVD-IVGTGGDGANTVNISTGSSILAAACGAKVAKQGNRSSSS 116 (343)
T ss_pred -------HHHhCCCHHHHHHHHHHHHHhCCCCCCCCCCCc-eeCCCCCCCCccccHHHHHHHHHhCCCeEEEeCCCCCCC
Confidence 12223332 335666666444433 255 4332 21 348999996 5777
Q ss_pred cchHHHHHHHHh
Q 007399 177 PVELIKCLRSIK 188 (605)
Q Consensus 177 ~i~f~dvi~aI~ 188 (605)
+..-.||++++.
T Consensus 117 ~~GsaDvLeaLG 128 (343)
T PLN02641 117 ACGSADVLEALG 128 (343)
T ss_pred ccCHHHHHHHcC
Confidence 877888888764
No 297
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=20.81 E-value=1.1e+02 Score=32.77 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=35.4
Q ss_pred HHHHHHHHhhhhhc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 007399 180 LIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (605)
Q Consensus 180 f~dvi~aI~~~AF~------~S~yPvIlSlE~Hc~~~qQ~~ma~~~~~i~Gd 225 (605)
=.|.++.|=+|.|. .+++||+|+.-...+..++++++++|-+.||-
T Consensus 73 d~~~~e~~~~~~~~~~l~~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~ 124 (371)
T cd00012 73 DWDDMEKIWDHLFFNELKVNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNV 124 (371)
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCCceEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 34666666666663 35899999976777779999999999999983
No 298
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=20.63 E-value=34 Score=24.35 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=6.6
Q ss_pred HHHHHhCCccEEEEEeecC
Q 007399 142 IIRALQKGVRVIELDIWPN 160 (605)
Q Consensus 142 Y~~aL~~GCRcvElD~WdG 160 (605)
||.+|-+|+||- ++.|
T Consensus 1 yitclfrgarcr---vysg 16 (42)
T PF11478_consen 1 YITCLFRGARCR---VYSG 16 (42)
T ss_dssp ----B-TT-EEE---TT-S
T ss_pred CeEEEeccceEE---EecC
Confidence 788899999985 5554
No 299
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=20.62 E-value=3.5e+02 Score=26.67 Aligned_cols=59 Identities=15% Similarity=0.346 Sum_probs=0.0
Q ss_pred CchHHHHHHHHhh----C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhhchhhhccCC-CCHHHHHHHH
Q 007399 23 APDAVKSMFDQYS----E-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRG-LNLEAFFKYL 93 (605)
Q Consensus 23 ~r~ei~~if~~~~----~-~-~~~~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~-l~~~gF~~~L 93 (605)
++.||..|+..|. . + +.||.++|..-..-.+.- -+..||+.|..... +. +++.+|++.|
T Consensus 28 s~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np------~~~rI~~~f~~~~~------~~~v~F~~Fv~~l 93 (187)
T KOG0034|consen 28 SANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNP------LADRIIDRFDTDGN------GDPVDFEEFVRLL 93 (187)
T ss_pred CHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCc------HHHHHHHHHhccCC------CCccCHHHHHHHH
No 300
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=20.16 E-value=81 Score=32.78 Aligned_cols=99 Identities=24% Similarity=0.299 Sum_probs=57.2
Q ss_pred ccccCCCCCCCCChHHH---HHHH-hCCccEEEEEee-cCCCCCCceEeeC--CcccccchHHHHHHHHhhhhhccCCCc
Q 007399 126 SYLTGNQLNSDCSDVPI---IRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYP 198 (605)
Q Consensus 126 TYL~g~Ql~g~SS~e~Y---~~aL-~~GCRcvElD~W-dG~~~~~piv~HG--~Tlts~i~f~dvi~aI~~~AF~~S~yP 198 (605)
+|++. |..+.|.. +++| ..||-.|||-+= .-|--|.|+|-.- ..|-..++++++++.+++-. ...+-|
T Consensus 19 ~yi~a----G~P~~~~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r-~~~~~p 93 (263)
T CHL00200 19 PFITA----GDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVN-GEIKAP 93 (263)
T ss_pred EEEeC----CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCC
Confidence 56663 45555544 4444 579999999872 2232344666543 34567788899999988876 447789
Q ss_pred eEEEeccCCCHHHHH---HHHHHHHHHhhccccCCC
Q 007399 199 VVITLEDHLTPDLQA---KVAEMVTQTLGEILFTPG 231 (605)
Q Consensus 199 vIlSlE~Hc~~~qQ~---~ma~~~~~i~Gd~L~~~~ 231 (605)
+||- -.-++=-|. +..+-+++.=-|-+++|+
T Consensus 94 ~vlm--~Y~N~i~~~G~e~F~~~~~~aGvdgviipD 127 (263)
T CHL00200 94 IVIF--TYYNPVLHYGINKFIKKISQAGVKGLIIPD 127 (263)
T ss_pred EEEE--ecccHHHHhCHHHHHHHHHHcCCeEEEecC
Confidence 6643 233444443 333333333334555543
Done!