Query 007405
Match_columns 605
No_of_seqs 379 out of 2475
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 23:09:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007405.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007405hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.5E-53 3.3E-58 463.8 40.8 517 50-587 16-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 2.4E-38 5.2E-43 328.0 30.5 438 62-582 14-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.3E-34 2.9E-39 315.4 45.0 446 63-584 8-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 2.1E-34 4.5E-39 313.6 43.5 429 64-582 5-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 3.3E-33 7.2E-38 300.3 44.5 445 66-586 6-487 (493)
6 PRK09584 tppB putative tripept 100.0 8E-33 1.7E-37 302.9 45.5 438 64-584 16-485 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 8.1E-29 1.8E-33 275.1 42.6 310 83-452 1-343 (654)
8 TIGR01299 synapt_SV2 synaptic 99.9 3E-25 6.4E-30 249.6 31.7 153 88-275 185-350 (742)
9 PRK03545 putative arabinose tr 99.9 1E-23 2.2E-28 224.5 36.1 363 66-579 6-381 (390)
10 PRK05122 major facilitator sup 99.9 2.6E-23 5.7E-28 221.9 36.6 366 67-578 13-389 (399)
11 PRK11646 multidrug resistance 99.9 3.8E-23 8.2E-28 220.8 32.9 333 72-536 13-360 (400)
12 PRK12382 putative transporter; 99.9 9.2E-23 2E-27 217.2 35.5 363 70-578 16-389 (392)
13 PRK10504 putative transporter; 99.9 1.4E-22 3.1E-27 221.1 36.2 389 68-537 9-417 (471)
14 PRK14995 methyl viologen resis 99.9 6.6E-23 1.4E-27 225.1 33.0 392 67-534 4-412 (495)
15 PRK11551 putative 3-hydroxyphe 99.9 1.6E-22 3.4E-27 216.3 35.1 178 65-278 11-188 (406)
16 PRK10054 putative transporter; 99.9 8E-23 1.7E-27 217.9 32.3 343 67-537 5-361 (395)
17 COG2814 AraJ Arabinose efflux 99.9 7.1E-22 1.5E-26 203.7 37.1 368 64-580 8-388 (394)
18 PRK10489 enterobactin exporter 99.9 1.5E-22 3.3E-27 217.5 33.5 379 74-592 22-413 (417)
19 TIGR00887 2A0109 phosphate:H+ 99.9 1E-22 2.2E-27 224.1 31.4 178 67-274 14-219 (502)
20 PRK10077 xylE D-xylose transpo 99.9 6.1E-23 1.3E-27 224.4 27.7 152 101-275 51-210 (479)
21 PRK10213 nepI ribonucleoside t 99.9 1.7E-21 3.6E-26 207.7 37.1 178 61-274 12-189 (394)
22 PRK15402 multidrug efflux syst 99.9 9.7E-22 2.1E-26 210.4 34.9 338 75-534 19-369 (406)
23 TIGR00900 2A0121 H+ Antiporter 99.9 5E-22 1.1E-26 208.2 31.9 345 74-534 4-362 (365)
24 PRK11663 regulatory protein Uh 99.9 1.9E-21 4.2E-26 210.0 35.7 168 71-274 25-192 (434)
25 PRK09874 drug efflux system pr 99.9 2.8E-21 6.2E-26 206.6 36.6 361 71-579 16-399 (408)
26 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.3E-21 5E-26 207.9 33.5 182 65-282 4-191 (412)
27 TIGR00903 2A0129 major facilit 99.9 2E-21 4.4E-26 204.7 32.2 159 87-281 8-166 (368)
28 PRK10642 proline/glycine betai 99.9 3.9E-21 8.4E-26 210.9 34.4 176 68-271 15-204 (490)
29 PRK09705 cynX putative cyanate 99.9 4.7E-21 1E-25 204.2 34.1 357 77-584 17-387 (393)
30 TIGR00711 efflux_EmrB drug res 99.9 2.3E-21 5E-26 212.2 30.8 388 71-534 4-409 (485)
31 PF00854 PTR2: POT family; In 99.9 3.2E-23 6.8E-28 219.2 15.5 340 136-518 1-369 (372)
32 PRK10091 MFS transport protein 99.9 1.8E-20 3.9E-25 199.0 35.4 173 70-278 4-176 (382)
33 TIGR00891 2A0112 putative sial 99.9 4.2E-21 9.1E-26 204.5 30.2 175 63-273 6-182 (405)
34 TIGR00879 SP MFS transporter, 99.9 8.1E-22 1.8E-26 214.2 25.2 152 93-276 51-213 (481)
35 TIGR00899 2A0120 sugar efflux 99.9 1E-20 2.2E-25 199.7 32.9 172 75-281 3-177 (375)
36 TIGR00893 2A0114 d-galactonate 99.9 9E-21 2E-25 200.3 31.9 157 90-281 14-170 (399)
37 TIGR00892 2A0113 monocarboxyla 99.9 8.7E-21 1.9E-25 206.0 32.5 151 93-279 42-193 (455)
38 PRK03699 putative transporter; 99.9 3E-20 6.4E-25 198.2 34.7 175 65-275 3-178 (394)
39 TIGR00710 efflux_Bcr_CflA drug 99.9 4.5E-20 9.8E-25 195.4 35.9 178 67-280 3-180 (385)
40 cd06174 MFS The Major Facilita 99.9 1.3E-20 2.8E-25 195.9 30.2 345 73-575 3-349 (352)
41 PRK15403 multidrug efflux syst 99.9 6E-20 1.3E-24 197.0 36.1 152 95-281 41-192 (413)
42 PF07690 MFS_1: Major Facilita 99.9 1.1E-21 2.4E-26 204.7 22.0 167 75-276 2-168 (352)
43 TIGR00890 2A0111 Oxalate/Forma 99.9 1.4E-20 2.9E-25 198.1 29.4 157 85-278 19-175 (377)
44 PRK11195 lysophospholipid tran 99.9 9.5E-20 2.1E-24 194.2 36.0 162 71-272 5-166 (393)
45 PRK11273 glpT sn-glycerol-3-ph 99.9 3.6E-20 7.8E-25 201.2 33.3 157 91-279 50-207 (452)
46 PRK09952 shikimate transporter 99.9 9.6E-20 2.1E-24 197.0 35.9 178 65-270 18-210 (438)
47 PRK15011 sugar efflux transpor 99.9 8.4E-20 1.8E-24 194.6 34.9 176 70-281 16-195 (393)
48 PRK09556 uhpT sugar phosphate 99.9 5.4E-21 1.2E-25 208.5 26.3 157 92-278 51-210 (467)
49 PRK10406 alpha-ketoglutarate t 99.9 8E-20 1.7E-24 197.3 35.1 177 68-272 21-211 (432)
50 TIGR00898 2A0119 cation transp 99.9 5.7E-21 1.2E-25 210.4 26.5 145 94-276 113-260 (505)
51 PRK12307 putative sialic acid 99.9 6.6E-20 1.4E-24 197.4 32.8 167 66-268 15-181 (426)
52 PRK03633 putative MFS family t 99.9 9.1E-20 2E-24 193.5 32.5 153 68-256 5-157 (381)
53 COG2271 UhpC Sugar phosphate p 99.9 1.2E-20 2.6E-25 192.0 24.1 173 72-279 28-205 (448)
54 PRK11652 emrD multidrug resist 99.9 1.3E-19 2.8E-24 193.2 33.4 175 66-276 5-179 (394)
55 PRK03893 putative sialic acid 99.9 6.8E-20 1.5E-24 201.3 31.9 168 65-268 16-183 (496)
56 KOG0569 Permease of the major 99.9 4.6E-21 1E-25 203.4 20.9 383 108-591 63-467 (485)
57 TIGR00894 2A0114euk Na(+)-depe 99.9 6.2E-20 1.3E-24 200.1 30.1 148 99-279 70-218 (465)
58 TIGR00895 2A0115 benzoate tran 99.9 1.4E-19 3.1E-24 191.9 31.9 181 65-281 13-193 (398)
59 PLN00028 nitrate transmembrane 99.9 4.1E-19 8.9E-24 194.0 35.4 176 66-278 33-217 (476)
60 TIGR00897 2A0118 polyol permea 99.9 8.5E-19 1.8E-23 187.5 35.8 172 64-267 8-180 (402)
61 TIGR00902 2A0127 phenyl propri 99.9 7.7E-19 1.7E-23 186.5 33.8 350 72-573 7-374 (382)
62 TIGR00712 glpT glycerol-3-phos 99.9 2.1E-19 4.5E-24 194.4 29.0 159 91-281 48-207 (438)
63 PRK10473 multidrug efflux syst 99.9 1.4E-18 3E-23 185.0 34.9 171 74-280 8-178 (392)
64 PRK11043 putative transporter; 99.9 1.1E-18 2.5E-23 186.3 34.2 162 81-277 15-178 (401)
65 PRK15075 citrate-proton sympor 99.9 7.5E-19 1.6E-23 189.8 32.3 176 64-267 10-199 (434)
66 PRK09528 lacY galactoside perm 99.9 3.2E-19 7E-24 191.8 28.9 378 70-579 11-404 (420)
67 KOG1330 Sugar transporter/spin 99.9 4.1E-21 8.8E-26 197.2 12.9 182 65-282 29-211 (493)
68 KOG0254 Predicted transporter 99.8 8.7E-20 1.9E-24 201.2 24.3 408 87-593 64-498 (513)
69 PF05977 MFS_3: Transmembrane 99.8 4.5E-18 9.7E-23 185.6 37.1 346 71-537 12-371 (524)
70 PRK11102 bicyclomycin/multidru 99.8 2.6E-18 5.5E-23 181.8 33.3 158 87-280 9-166 (377)
71 KOG2532 Permease of the major 99.8 1.1E-19 2.4E-24 195.0 22.6 355 98-579 66-448 (466)
72 PRK08633 2-acyl-glycerophospho 99.8 2.3E-18 4.9E-23 208.2 36.1 154 70-255 10-165 (1146)
73 PRK10133 L-fucose transporter; 99.8 4.2E-18 9.2E-23 183.9 34.0 154 67-253 24-177 (438)
74 TIGR00882 2A0105 oligosacchari 99.8 1.7E-18 3.7E-23 184.7 30.4 375 70-576 3-393 (396)
75 TIGR00881 2A0104 phosphoglycer 99.8 6.2E-19 1.3E-23 185.6 25.1 154 91-279 16-170 (379)
76 PRK15034 nitrate/nitrite trans 99.8 6.5E-18 1.4E-22 180.3 32.8 179 69-279 34-231 (462)
77 PRK06814 acylglycerophosphoeth 99.8 2.9E-18 6.3E-23 206.9 32.9 136 105-274 52-189 (1140)
78 PRK11128 putative 3-phenylprop 99.8 1.1E-17 2.3E-22 177.7 31.6 327 78-537 13-357 (382)
79 TIGR00889 2A0110 nucleoside tr 99.8 7.3E-17 1.6E-21 173.3 36.5 370 72-581 5-405 (418)
80 TIGR00886 2A0108 nitrite extru 99.8 6.2E-18 1.3E-22 177.9 26.1 163 71-269 3-177 (366)
81 PRK11010 ampG muropeptide tran 99.8 9.8E-17 2.1E-21 175.8 35.8 174 69-276 12-191 (491)
82 TIGR00885 fucP L-fucose:H+ sym 99.8 5.2E-16 1.1E-20 166.2 35.6 171 71-274 5-201 (410)
83 TIGR00896 CynX cyanate transpo 99.8 6.3E-17 1.4E-21 169.9 27.8 146 89-271 19-166 (355)
84 TIGR00883 2A0106 metabolite-pr 99.8 5.7E-17 1.2E-21 171.6 27.3 156 91-273 14-184 (394)
85 KOG0255 Synaptic vesicle trans 99.8 1.9E-17 4.1E-22 183.2 24.6 374 98-588 111-502 (521)
86 TIGR00792 gph sugar (Glycoside 99.8 4.4E-17 9.6E-22 176.0 26.4 173 79-279 9-193 (437)
87 PF00083 Sugar_tr: Sugar (and 99.8 6.4E-23 1.4E-27 222.6 -20.4 387 106-591 47-449 (451)
88 COG2223 NarK Nitrate/nitrite t 99.8 4.6E-16 9.9E-21 159.1 30.5 382 64-582 9-405 (417)
89 PF06609 TRI12: Fungal trichot 99.8 7.2E-16 1.6E-20 168.1 32.3 152 90-278 64-215 (599)
90 PRK11902 ampG muropeptide tran 99.8 2.9E-15 6.2E-20 160.2 35.7 166 75-274 5-176 (402)
91 TIGR00901 2A0125 AmpG-related 99.7 6.2E-16 1.4E-20 162.4 28.2 158 88-278 6-176 (356)
92 TIGR01301 GPH_sucrose GPH fami 99.7 4.9E-15 1.1E-19 159.3 34.8 418 71-582 6-475 (477)
93 KOG2615 Permease of the major 99.7 4.6E-15 9.9E-20 148.9 26.0 116 103-254 66-181 (451)
94 KOG3764 Vesicular amine transp 99.7 8.4E-16 1.8E-20 155.0 20.6 151 99-283 100-250 (464)
95 TIGR00806 rfc RFC reduced fola 99.7 5.1E-14 1.1E-18 148.0 33.3 154 88-278 44-201 (511)
96 KOG2504 Monocarboxylate transp 99.7 2.4E-14 5.2E-19 155.7 31.6 408 72-578 45-476 (509)
97 PRK09848 glucuronide transport 99.7 1.8E-14 4E-19 156.3 28.2 155 71-251 10-173 (448)
98 COG0738 FucP Fucose permease [ 99.7 3.2E-14 6.9E-19 144.7 27.6 137 86-254 29-165 (422)
99 TIGR00788 fbt folate/biopterin 99.7 1.6E-14 3.5E-19 157.2 26.7 172 71-275 28-204 (468)
100 COG2807 CynX Cyanate permease 99.7 1.6E-13 3.5E-18 137.6 31.1 330 71-537 14-361 (395)
101 TIGR02718 sider_RhtX_FptX side 99.7 2.1E-13 4.5E-18 145.2 33.7 176 71-278 3-182 (390)
102 COG2271 UhpC Sugar phosphate p 99.7 6.1E-16 1.3E-20 157.9 13.1 180 70-281 253-435 (448)
103 PRK09669 putative symporter Ya 99.7 1E-13 2.2E-18 150.4 31.2 174 74-275 14-199 (444)
104 KOG0253 Synaptic vesicle trans 99.7 2.9E-14 6.2E-19 142.1 24.1 163 79-278 87-249 (528)
105 PRK10429 melibiose:sodium symp 99.6 3.7E-14 8.1E-19 154.9 26.1 172 75-275 12-196 (473)
106 PF03825 Nuc_H_symport: Nucleo 99.6 2.1E-13 4.6E-18 144.7 30.7 376 72-580 5-397 (400)
107 KOG0252 Inorganic phosphate tr 99.6 1.1E-14 2.4E-19 149.4 17.1 142 102-271 81-237 (538)
108 PRK10642 proline/glycine betai 99.6 3E-14 6.5E-19 156.4 21.1 180 66-277 247-427 (490)
109 PTZ00207 hypothetical protein; 99.6 5.3E-12 1.2E-16 138.8 37.9 178 65-277 24-202 (591)
110 PF01306 LacY_symp: LacY proto 99.6 4.7E-14 1E-18 147.5 20.1 376 70-580 8-402 (412)
111 PF13347 MFS_2: MFS/sugar tran 99.6 7.9E-14 1.7E-18 150.4 22.3 346 79-537 11-386 (428)
112 PRK11462 putative transporter; 99.6 2.5E-12 5.3E-17 139.9 32.6 178 74-278 14-202 (460)
113 TIGR00805 oat sodium-independe 99.6 9.1E-14 2E-18 156.2 20.8 208 64-278 27-279 (633)
114 KOG2533 Permease of the major 99.5 3.4E-12 7.4E-17 137.7 28.0 149 98-281 74-228 (495)
115 PRK09556 uhpT sugar phosphate 99.5 9.6E-13 2.1E-17 143.6 19.9 176 70-278 259-447 (467)
116 PRK15011 sugar efflux transpor 99.5 3.3E-12 7.1E-17 136.2 23.1 172 71-278 218-389 (393)
117 PF11700 ATG22: Vacuole efflux 99.5 1.8E-10 3.9E-15 124.9 34.6 87 473-576 380-466 (477)
118 TIGR01299 synapt_SV2 synaptic 99.4 6.6E-12 1.4E-16 142.1 21.2 132 111-278 601-732 (742)
119 PRK09952 shikimate transporter 99.4 1.2E-11 2.6E-16 133.9 22.2 183 66-279 247-432 (438)
120 PRK11273 glpT sn-glycerol-3-ph 99.4 5.6E-12 1.2E-16 137.0 17.9 177 70-278 254-433 (452)
121 PRK03699 putative transporter; 99.4 1.6E-11 3.5E-16 131.0 21.0 173 70-278 206-378 (394)
122 TIGR00883 2A0106 metabolite-pr 99.4 3.2E-12 6.9E-17 135.2 15.1 172 67-270 217-391 (394)
123 PF03209 PUCC: PUCC protein; 99.4 1.1E-09 2.3E-14 113.0 32.7 368 96-576 6-396 (403)
124 PRK05122 major facilitator sup 99.4 2.3E-11 5.1E-16 129.8 21.4 167 79-283 226-392 (399)
125 cd06174 MFS The Major Facilita 99.4 1.8E-11 4E-16 127.0 20.0 171 71-276 177-348 (352)
126 COG2211 MelB Na+/melibiose sym 99.4 1.8E-10 3.8E-15 122.0 27.0 350 71-537 14-398 (467)
127 TIGR00890 2A0111 Oxalate/Forma 99.4 1.2E-11 2.6E-16 129.9 18.5 169 71-273 207-375 (377)
128 TIGR00899 2A0120 sugar efflux 99.4 2.7E-11 5.9E-16 127.7 20.7 163 78-276 208-370 (375)
129 TIGR00889 2A0110 nucleoside tr 99.4 2.4E-11 5.3E-16 130.6 19.4 178 73-282 212-404 (418)
130 PRK09705 cynX putative cyanate 99.4 8.3E-11 1.8E-15 125.4 22.9 177 71-284 207-385 (393)
131 TIGR00893 2A0114 d-galactonate 99.4 4.5E-11 9.7E-16 126.1 20.4 179 70-277 216-396 (399)
132 PRK11551 putative 3-hydroxyphe 99.4 5.1E-11 1.1E-15 127.4 20.9 170 73-278 224-394 (406)
133 TIGR00880 2_A_01_02 Multidrug 99.3 7.2E-12 1.6E-16 111.8 11.6 132 112-278 5-136 (141)
134 PRK09874 drug efflux system pr 99.3 4.7E-11 1E-15 127.6 19.9 165 79-278 229-396 (408)
135 PRK03545 putative arabinose tr 99.3 1.3E-10 2.7E-15 123.8 22.7 174 71-280 207-380 (390)
136 PRK11663 regulatory protein Uh 99.3 6.5E-11 1.4E-15 128.0 20.2 180 70-281 244-425 (434)
137 PRK03893 putative sialic acid 99.3 4.7E-11 1E-15 131.2 19.0 150 87-269 293-442 (496)
138 TIGR00902 2A0127 phenyl propri 99.3 1.6E-10 3.4E-15 122.8 22.1 168 70-275 206-374 (382)
139 PRK10489 enterobactin exporter 99.3 9.2E-11 2E-15 126.1 19.9 163 85-282 239-401 (417)
140 PRK12382 putative transporter; 99.3 8.4E-11 1.8E-15 125.2 19.2 162 79-278 226-387 (392)
141 PRK09528 lacY galactoside perm 99.3 3.6E-11 7.8E-16 129.4 16.4 161 83-278 237-401 (420)
142 TIGR00891 2A0112 putative sial 99.3 7.7E-11 1.7E-15 125.4 18.3 165 66-264 235-400 (405)
143 PRK03633 putative MFS family t 99.3 2.4E-10 5.2E-15 121.3 21.4 155 82-275 213-367 (381)
144 PRK15075 citrate-proton sympor 99.3 1.7E-10 3.6E-15 124.8 20.4 161 67-259 236-398 (434)
145 PRK10406 alpha-ketoglutarate t 99.3 3.2E-10 7E-15 122.5 21.7 171 76-278 250-422 (432)
146 TIGR00897 2A0118 polyol permea 99.3 3.8E-10 8.3E-15 120.7 21.8 175 71-278 224-399 (402)
147 TIGR00712 glpT glycerol-3-phos 99.3 6.6E-11 1.4E-15 128.1 15.6 179 70-281 252-434 (438)
148 KOG4686 Predicted sugar transp 99.3 4.2E-11 9.2E-16 115.6 12.2 137 90-257 64-200 (459)
149 PRK11010 ampG muropeptide tran 99.3 5.2E-10 1.1E-14 122.8 22.3 173 78-281 231-404 (491)
150 PF11700 ATG22: Vacuole efflux 99.3 5.2E-10 1.1E-14 121.3 21.7 183 69-278 281-466 (477)
151 COG2814 AraJ Arabinose efflux 99.2 7.8E-10 1.7E-14 114.8 21.5 178 70-283 212-389 (394)
152 TIGR00879 SP MFS transporter, 99.2 2.8E-10 6.2E-15 123.5 18.6 187 71-282 286-472 (481)
153 TIGR00892 2A0113 monocarboxyla 99.2 2.4E-10 5.3E-15 124.3 17.0 169 71-274 243-415 (455)
154 KOG2325 Predicted transporter/ 99.2 2.4E-10 5.2E-15 121.2 15.7 191 61-282 26-231 (488)
155 KOG4686 Predicted sugar transp 99.2 4E-10 8.7E-15 109.0 15.6 174 61-271 256-433 (459)
156 KOG2563 Permease of the major 99.2 7.5E-10 1.6E-14 114.5 18.6 165 61-254 37-201 (480)
157 TIGR00881 2A0104 phosphoglycer 99.2 1.9E-10 4.2E-15 120.8 14.8 161 70-262 217-379 (379)
158 COG2223 NarK Nitrate/nitrite t 99.2 6.5E-10 1.4E-14 114.3 17.0 184 70-282 219-403 (417)
159 TIGR01272 gluP glucose/galacto 99.2 1.7E-09 3.8E-14 111.3 20.0 161 70-268 141-303 (310)
160 PLN00028 nitrate transmembrane 99.2 1E-09 2.3E-14 120.0 18.6 173 71-280 254-433 (476)
161 PRK12307 putative sialic acid 99.1 2.5E-09 5.4E-14 115.1 20.3 148 83-264 245-392 (426)
162 TIGR01272 gluP glucose/galacto 99.1 6.7E-09 1.5E-13 106.9 21.9 84 185-274 8-107 (310)
163 TIGR02332 HpaX 4-hydroxyphenyl 99.1 9.9E-10 2.2E-14 117.9 16.3 164 70-268 243-409 (412)
164 TIGR00894 2A0114euk Na(+)-depe 99.1 3.2E-09 6.8E-14 115.9 20.5 178 68-278 260-448 (465)
165 TIGR00900 2A0121 H+ Antiporter 99.1 1.8E-09 3.8E-14 113.0 17.7 153 71-257 212-365 (365)
166 PRK11128 putative 3-phenylprop 99.1 5.3E-09 1.2E-13 111.0 21.3 165 71-273 207-372 (382)
167 PRK15402 multidrug efflux syst 99.1 7.1E-09 1.5E-13 111.0 22.3 171 71-272 217-387 (406)
168 PRK10091 MFS transport protein 99.1 5.7E-09 1.2E-13 110.8 21.2 172 71-278 201-374 (382)
169 PRK10504 putative transporter; 99.1 4.5E-09 9.7E-14 114.8 20.7 156 71-258 263-418 (471)
170 COG2270 Permeases of the major 99.1 1.5E-08 3.4E-13 104.3 22.1 57 481-537 349-405 (438)
171 TIGR02718 sider_RhtX_FptX side 99.1 8.5E-09 1.8E-13 109.8 20.9 174 71-274 210-385 (390)
172 TIGR00882 2A0105 oligosacchari 99.1 5E-09 1.1E-13 111.8 18.6 170 72-276 218-391 (396)
173 TIGR00711 efflux_EmrB drug res 99.1 4.7E-09 1E-13 114.9 17.6 155 71-256 257-411 (485)
174 TIGR00895 2A0115 benzoate tran 99.0 5.2E-09 1.1E-13 110.9 17.4 148 69-252 250-397 (398)
175 KOG2816 Predicted transporter 99.0 1E-07 2.2E-12 102.5 26.9 172 75-286 24-205 (463)
176 TIGR00792 gph sugar (Glycoside 99.0 7.8E-09 1.7E-13 111.6 18.4 160 70-258 223-383 (437)
177 TIGR00887 2A0109 phosphate:H+ 99.0 5.6E-09 1.2E-13 115.1 17.5 176 74-282 293-490 (502)
178 PRK10077 xylE D-xylose transpo 99.0 1.6E-08 3.4E-13 110.6 20.9 157 94-281 295-458 (479)
179 PRK15034 nitrate/nitrite trans 99.0 2.8E-08 6.2E-13 106.6 20.7 183 71-278 254-452 (462)
180 COG2270 Permeases of the major 99.0 7.7E-09 1.7E-13 106.5 15.5 172 70-276 253-425 (438)
181 PRK10213 nepI ribonucleoside t 99.0 5.1E-08 1.1E-12 104.0 22.7 165 71-272 218-383 (394)
182 PRK14995 methyl viologen resis 99.0 9E-09 2E-13 113.2 17.3 153 71-255 261-413 (495)
183 PF05977 MFS_3: Transmembrane 99.0 2.7E-08 5.8E-13 109.2 20.8 169 74-277 223-391 (524)
184 PRK11902 ampG muropeptide tran 99.0 4.4E-08 9.4E-13 104.8 22.1 153 90-277 230-387 (402)
185 TIGR00896 CynX cyanate transpo 99.0 2E-08 4.3E-13 105.4 18.9 151 71-257 199-350 (355)
186 KOG3626 Organic anion transpor 99.0 2.3E-07 4.9E-12 102.8 27.0 211 67-284 94-347 (735)
187 PRK08633 2-acyl-glycerophospho 99.0 1.8E-08 3.9E-13 122.3 20.4 163 71-268 234-398 (1146)
188 PRK10133 L-fucose transporter; 99.0 2.9E-08 6.3E-13 107.4 19.7 162 74-273 263-426 (438)
189 PRK10054 putative transporter; 99.0 1.5E-08 3.2E-13 108.2 17.1 172 71-277 208-381 (395)
190 PRK11646 multidrug resistance 99.0 2.3E-08 5E-13 106.9 18.3 154 87-275 226-383 (400)
191 TIGR00710 efflux_Bcr_CflA drug 99.0 6.2E-08 1.3E-12 102.4 21.1 160 72-263 209-369 (385)
192 PF03092 BT1: BT1 family; Int 98.9 1.5E-07 3.2E-12 101.5 23.6 164 90-282 10-177 (433)
193 TIGR00903 2A0129 major facilit 98.9 7.4E-08 1.6E-12 101.7 19.3 165 70-276 193-361 (368)
194 KOG0253 Synaptic vesicle trans 98.9 2E-08 4.3E-13 101.0 13.6 174 68-278 325-517 (528)
195 PRK09848 glucuronide transport 98.9 3.3E-08 7.1E-13 107.4 16.3 161 71-258 230-391 (448)
196 KOG0569 Permease of the major 98.9 1.3E-07 2.8E-12 101.4 20.1 196 64-286 264-460 (485)
197 PRK06814 acylglycerophosphoeth 98.9 4.7E-08 1E-12 118.6 18.5 183 71-268 227-410 (1140)
198 TIGR00898 2A0119 cation transp 98.9 4.4E-08 9.5E-13 108.0 16.5 131 112-277 362-492 (505)
199 PRK11195 lysophospholipid tran 98.8 2.4E-07 5.1E-12 98.9 20.7 158 83-276 219-376 (393)
200 PF13347 MFS_2: MFS/sugar tran 98.8 1.3E-07 2.8E-12 102.0 18.5 161 70-258 226-387 (428)
201 KOG2504 Monocarboxylate transp 98.8 4.5E-08 9.8E-13 106.9 13.9 176 69-280 298-476 (509)
202 TIGR00901 2A0125 AmpG-related 98.8 1.1E-07 2.4E-12 99.7 16.4 145 70-239 210-355 (356)
203 PF07690 MFS_1: Major Facilita 98.8 2.9E-08 6.4E-13 103.3 11.5 142 73-246 210-352 (352)
204 PF05631 DUF791: Protein of un 98.8 1.7E-06 3.7E-11 88.2 22.6 157 95-282 59-218 (354)
205 COG2807 CynX Cyanate permease 98.8 7.4E-07 1.6E-11 90.2 19.5 164 71-269 210-374 (395)
206 PRK11102 bicyclomycin/multidru 98.8 9.3E-07 2E-11 93.4 21.5 147 72-250 197-344 (377)
207 PRK10473 multidrug efflux syst 98.7 8.9E-07 1.9E-11 94.2 21.2 70 86-156 220-289 (392)
208 PF03825 Nuc_H_symport: Nucleo 98.7 9.8E-07 2.1E-11 93.9 21.2 179 71-279 209-394 (400)
209 KOG2532 Permease of the major 98.7 1.7E-07 3.7E-12 101.2 15.5 176 70-278 259-445 (466)
210 PRK11043 putative transporter; 98.7 1.5E-06 3.2E-11 92.8 22.1 148 80-259 214-361 (401)
211 PF03137 OATP: Organic Anion T 98.7 3E-09 6.4E-14 117.0 -0.9 201 75-283 9-253 (539)
212 PRK09669 putative symporter Ya 98.7 9.3E-07 2E-11 95.9 18.1 159 71-258 231-391 (444)
213 TIGR00885 fucP L-fucose:H+ sym 98.6 1.4E-06 3E-11 93.4 18.9 161 71-269 234-401 (410)
214 PRK10429 melibiose:sodium symp 98.6 9.9E-07 2.1E-11 96.5 17.4 165 69-258 231-396 (473)
215 PF01306 LacY_symp: LacY proto 98.6 4E-06 8.6E-11 88.3 19.7 177 70-281 221-401 (412)
216 KOG3762 Predicted transporter 98.6 5.3E-06 1.1E-10 87.9 20.3 121 418-579 427-548 (618)
217 TIGR00886 2A0108 nitrite extru 98.6 5.6E-07 1.2E-11 94.5 13.0 139 71-241 227-365 (366)
218 TIGR00924 yjdL_sub1_fam amino 98.6 2.6E-06 5.7E-11 93.1 18.5 187 70-281 273-469 (475)
219 PRK11652 emrD multidrug resist 98.5 9.3E-06 2E-10 86.4 21.1 140 87-259 225-364 (394)
220 PF06813 Nodulin-like: Nodulin 98.4 1.9E-05 4.1E-10 77.9 18.4 156 67-254 1-156 (250)
221 PRK11462 putative transporter; 98.4 2.5E-05 5.3E-10 85.2 21.3 158 73-258 232-390 (460)
222 PF03209 PUCC: PUCC protein; 98.4 3E-05 6.6E-10 80.5 20.5 172 74-276 213-394 (403)
223 COG0477 ProP Permeases of the 98.4 1.9E-05 4.2E-10 79.1 18.6 142 95-269 27-174 (338)
224 KOG3098 Uncharacterized conser 98.4 0.00018 4E-09 76.7 25.4 99 111-245 56-154 (461)
225 COG2211 MelB Na+/melibiose sym 98.3 1.1E-05 2.4E-10 85.9 15.3 160 71-257 238-398 (467)
226 PRK15403 multidrug efflux syst 98.3 5.4E-05 1.2E-09 81.3 20.4 170 70-271 219-388 (413)
227 KOG3764 Vesicular amine transp 98.3 1.7E-06 3.7E-11 88.4 8.1 173 82-281 283-455 (464)
228 PRK09584 tppB putative tripept 98.3 3.9E-05 8.4E-10 84.5 19.1 175 78-278 281-477 (500)
229 COG0738 FucP Fucose permease [ 98.2 5E-05 1.1E-09 78.3 17.2 160 71-268 238-397 (422)
230 PRK10207 dipeptide/tripeptide 98.2 3.3E-05 7.2E-10 84.7 16.7 175 78-278 278-474 (489)
231 KOG3762 Predicted transporter 98.2 1E-05 2.3E-10 85.7 11.2 169 76-280 378-547 (618)
232 TIGR00880 2_A_01_02 Multidrug 98.2 5.3E-05 1.1E-09 66.9 14.1 113 424-577 25-137 (141)
233 KOG2533 Permease of the major 98.1 1.6E-05 3.5E-10 86.3 12.0 164 70-266 274-442 (495)
234 TIGR01301 GPH_sucrose GPH fami 98.1 0.0002 4.4E-09 77.6 19.7 207 62-282 251-473 (477)
235 PF01770 Folate_carrier: Reduc 98.1 0.005 1.1E-07 64.8 28.9 156 89-280 23-182 (412)
236 TIGR00788 fbt folate/biopterin 98.0 3.4E-05 7.4E-10 84.2 11.1 136 97-257 280-415 (468)
237 PF00083 Sugar_tr: Sugar (and 98.0 3.9E-08 8.6E-13 106.7 -12.0 188 70-284 253-440 (451)
238 KOG0254 Predicted transporter 98.0 0.00026 5.6E-09 78.4 17.3 196 65-283 290-486 (513)
239 PF02487 CLN3: CLN3 protein; 97.9 0.032 6.9E-07 58.9 30.9 62 472-533 334-395 (402)
240 KOG1330 Sugar transporter/spin 97.9 2.7E-06 5.8E-11 88.8 0.5 124 421-584 92-215 (493)
241 PF06963 FPN1: Ferroportin1 (F 97.9 0.021 4.6E-07 61.0 29.7 192 70-276 3-196 (432)
242 PF12832 MFS_1_like: MFS_1 lik 97.9 0.00012 2.5E-09 58.4 9.2 68 76-145 7-74 (77)
243 PF06609 TRI12: Fungal trichot 97.8 0.0016 3.5E-08 72.1 19.4 154 65-251 306-463 (599)
244 KOG4332 Predicted sugar transp 97.7 0.0011 2.4E-08 64.5 14.0 156 90-276 57-216 (454)
245 KOG3574 Acetyl-CoA transporter 97.7 0.017 3.6E-07 59.3 22.8 61 474-534 370-430 (510)
246 PF05978 UNC-93: Ion channel r 97.6 0.0021 4.5E-08 58.7 14.7 106 109-250 41-146 (156)
247 KOG0252 Inorganic phosphate tr 97.6 0.0001 2.2E-09 77.1 6.7 180 68-278 303-496 (538)
248 TIGR00805 oat sodium-independe 97.6 0.0014 3E-08 74.2 15.6 179 70-255 331-581 (633)
249 PTZ00207 hypothetical protein; 97.4 0.0014 3.1E-08 72.7 13.0 176 70-283 354-555 (591)
250 TIGR00806 rfc RFC reduced fola 97.4 0.0026 5.6E-08 68.1 13.9 91 419-533 84-174 (511)
251 KOG2615 Permease of the major 97.4 0.002 4.3E-08 66.2 12.3 152 69-254 260-413 (451)
252 KOG0637 Sucrose transporter an 97.4 0.00024 5.2E-09 74.3 5.9 165 69-252 32-202 (498)
253 TIGR00769 AAA ADP/ATP carrier 97.4 0.32 6.8E-06 52.8 33.5 169 68-253 6-189 (472)
254 PRK15462 dipeptide/tripeptide 97.3 0.0098 2.1E-07 64.9 17.7 158 69-252 268-437 (493)
255 PRK03612 spermidine synthase; 96.9 0.11 2.4E-06 57.4 21.3 158 88-275 33-193 (521)
256 KOG0255 Synaptic vesicle trans 96.9 0.043 9.4E-07 60.8 18.2 123 97-254 345-467 (521)
257 KOG2816 Predicted transporter 96.9 0.0057 1.2E-07 66.2 10.8 128 91-254 263-391 (463)
258 PF03137 OATP: Organic Anion T 96.9 0.00026 5.7E-09 78.2 0.0 181 70-256 306-515 (539)
259 KOG2563 Permease of the major 96.9 0.0056 1.2E-07 64.3 9.7 185 71-286 268-456 (480)
260 PF06779 DUF1228: Protein of u 96.8 0.015 3.3E-07 46.8 9.8 66 90-156 12-77 (85)
261 KOG3626 Organic anion transpor 96.3 0.098 2.1E-06 58.9 15.4 179 71-255 394-649 (735)
262 PF06963 FPN1: Ferroportin1 (F 96.2 0.21 4.6E-06 53.5 17.0 138 87-250 276-413 (432)
263 PF06813 Nodulin-like: Nodulin 96.1 0.087 1.9E-06 52.1 12.3 95 423-534 62-156 (250)
264 PF00854 PTR2: POT family; In 96.0 0.048 1E-06 57.6 10.8 124 429-584 3-129 (372)
265 COG3104 PTR2 Dipeptide/tripept 96.0 0.19 4.2E-06 53.9 14.9 165 88-277 303-484 (498)
266 KOG2325 Predicted transporter/ 95.5 0.11 2.3E-06 56.1 11.2 133 427-583 102-234 (488)
267 KOG3098 Uncharacterized conser 94.5 2.2 4.7E-05 46.0 17.4 114 116-247 290-406 (461)
268 TIGR00926 2A1704 Peptide:H+ sy 94.4 3.4 7.3E-05 47.1 19.9 91 471-580 563-653 (654)
269 PF02487 CLN3: CLN3 protein; 94.0 0.9 1.9E-05 48.1 13.1 63 186-254 334-396 (402)
270 PF03092 BT1: BT1 family; Int 93.0 1.3 2.7E-05 48.0 12.8 90 472-580 85-177 (433)
271 KOG3097 Predicted membrane pro 92.2 1.6 3.4E-05 44.5 10.9 121 61-218 21-141 (390)
272 KOG3810 Micronutrient transpor 91.3 8 0.00017 39.9 14.9 94 471-576 324-419 (433)
273 TIGR00769 AAA ADP/ATP carrier 90.9 25 0.00054 38.4 19.6 73 195-272 274-346 (472)
274 PF05978 UNC-93: Ion channel r 90.4 2.6 5.6E-05 38.5 9.9 62 472-533 88-149 (156)
275 TIGR00939 2a57 Equilibrative N 89.6 34 0.00073 37.0 24.8 60 472-531 371-430 (437)
276 KOG4332 Predicted sugar transp 88.0 3.5 7.6E-05 40.8 9.2 140 107-275 284-426 (454)
277 TIGR00939 2a57 Equilibrative N 87.9 4.3 9.4E-05 43.8 11.0 56 187-248 372-427 (437)
278 KOG0637 Sucrose transporter an 86.0 1.4 3.1E-05 46.9 5.8 90 64-154 274-380 (498)
279 PF01770 Folate_carrier: Reduc 83.0 36 0.00078 36.3 14.7 63 471-534 92-154 (412)
280 PF13000 Acatn: Acetyl-coenzym 81.9 85 0.0018 34.3 21.7 61 474-534 406-466 (544)
281 KOG3880 Predicted small molecu 81.0 70 0.0015 32.8 16.5 50 483-532 352-401 (409)
282 PF03219 TLC: TLC ATP/ADP tran 78.7 1.1E+02 0.0024 33.6 19.4 74 196-274 291-364 (491)
283 COG3202 ATP/ADP translocase [E 71.8 1.6E+02 0.0034 32.2 25.4 165 67-254 25-209 (509)
284 KOG1479 Nucleoside transporter 70.8 1.5E+02 0.0033 31.5 22.1 58 472-529 342-399 (406)
285 COG5336 Uncharacterized protei 70.3 15 0.00033 30.8 5.9 31 118-148 55-85 (116)
286 COG0477 ProP Permeases of the 70.0 89 0.0019 30.2 13.1 62 473-534 94-157 (338)
287 PF13000 Acatn: Acetyl-coenzym 69.3 55 0.0012 35.7 11.5 59 194-258 412-470 (544)
288 PF01733 Nucleoside_tran: Nucl 61.6 2.9 6.2E-05 42.9 0.2 56 187-248 248-303 (309)
289 PF03219 TLC: TLC ATP/ADP tran 60.0 2.7E+02 0.0059 30.6 28.7 171 67-254 22-205 (491)
290 KOG2601 Iron transporter [Inor 53.9 3E+02 0.0064 29.2 17.7 56 474-529 387-442 (503)
291 PF07672 MFS_Mycoplasma: Mycop 53.2 2.4E+02 0.0053 28.1 11.9 231 218-534 1-267 (267)
292 KOG1237 H+/oligopeptide sympor 52.6 36 0.00079 38.1 7.0 66 185-256 456-521 (571)
293 PRK10263 DNA translocase FtsK; 49.7 1.9E+02 0.004 35.6 12.3 13 120-132 63-75 (1355)
294 TIGR01666 YCCS hypothetical me 49.4 1.9E+02 0.0041 33.4 12.2 48 130-204 51-98 (704)
295 PF09527 ATPase_gene1: Putativ 48.5 87 0.0019 22.7 6.3 34 112-145 7-40 (55)
296 COG3202 ATP/ADP translocase [E 47.9 4.1E+02 0.0089 29.1 19.0 77 196-277 293-370 (509)
297 KOG1479 Nucleoside transporter 47.5 96 0.0021 33.0 8.7 127 91-245 265-395 (406)
298 TIGR01667 YCCS_YHJK integral m 43.4 1.7E+02 0.0037 33.8 10.7 28 129-156 50-77 (701)
299 PF11947 DUF3464: Protein of u 41.5 56 0.0012 29.5 5.1 48 187-243 97-144 (153)
300 TIGR01478 STEVOR variant surfa 40.1 1.6E+02 0.0036 29.4 8.4 28 559-586 264-291 (295)
301 PF07857 DUF1632: CEO family ( 38.4 3.1E+02 0.0067 27.2 10.2 25 505-529 75-99 (254)
302 COG5336 Uncharacterized protei 38.2 2.5E+02 0.0054 23.8 8.0 33 502-534 35-67 (116)
303 TIGR00927 2A1904 K+-dependent 36.2 3.8E+02 0.0082 31.9 11.6 42 89-132 952-993 (1096)
304 PF06645 SPC12: Microsomal sig 35.8 1.6E+02 0.0035 23.2 6.3 40 233-275 12-51 (76)
305 PF06912 DUF1275: Protein of u 34.9 4E+02 0.0086 25.2 18.9 40 112-152 53-95 (209)
306 PRK03612 spermidine synthase; 34.0 5.9E+02 0.013 28.2 12.8 50 483-533 120-169 (521)
307 KOG3810 Micronutrient transpor 33.1 4E+02 0.0087 28.0 10.1 86 108-220 274-359 (433)
308 PF12273 RCR: Chitin synthesis 32.2 22 0.00048 31.2 1.1 17 259-275 1-17 (130)
309 KOG4830 Predicted sugar transp 32.2 75 0.0016 31.6 4.7 61 76-138 24-93 (412)
310 PTZ00370 STEVOR; Provisional 31.2 1.1E+02 0.0024 30.6 5.7 28 559-586 260-287 (296)
311 TIGR02230 ATPase_gene1 F0F1-AT 26.9 2.1E+02 0.0046 23.9 5.8 21 120-140 57-77 (100)
312 PF12805 FUSC-like: FUSC-like 26.8 6.5E+02 0.014 25.2 11.5 14 473-486 23-36 (284)
313 TIGR02230 ATPase_gene1 F0F1-AT 25.6 4E+02 0.0087 22.3 7.5 36 235-270 49-88 (100)
314 KOG3574 Acetyl-CoA transporter 23.7 5.9E+02 0.013 27.3 9.5 61 195-261 377-437 (510)
315 PRK11715 inner membrane protei 23.2 9.7E+02 0.021 25.9 12.4 20 431-450 305-324 (436)
316 PF06123 CreD: Inner membrane 21.0 1.1E+03 0.023 25.5 12.6 19 432-450 300-318 (430)
317 COG2233 UraA Xanthine/uracil p 20.5 7.8E+02 0.017 26.7 10.1 130 85-253 29-159 (451)
318 PF12805 FUSC-like: FUSC-like 20.4 7E+02 0.015 25.0 9.6 18 186-203 22-39 (284)
319 PF01733 Nucleoside_tran: Nucl 20.0 41 0.00088 34.4 0.5 59 472-530 247-305 (309)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-53 Score=463.79 Aligned_cols=517 Identities=45% Similarity=0.746 Sum_probs=456.7
Q ss_pred CccccCCCCccCcc---cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHH
Q 007405 50 TPVNVHGKPIADLS---KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGG 126 (605)
Q Consensus 50 ~~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G 126 (605)
+.+|+++.+. .+. +++.|++...+++.+.++++++|++..++..|++.++|.+...+...++.|.+.....+++++
T Consensus 16 ~~~d~~~~~~-~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~ 94 (571)
T KOG1237|consen 16 TSVDYRGPLL-GSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGA 94 (571)
T ss_pred ceeeccCCcc-cccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHH
Confidence 5567776666 555 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccch
Q 007405 127 FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRP 206 (605)
Q Consensus 127 ~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 206 (605)
+++|.|+||++++.++.+++.+|..++++++..+.+.|. .| ...+...+|+++++.....++.++.+.++|.|+.++
T Consensus 95 ~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~--~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~ 171 (571)
T KOG1237|consen 95 FLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPF--MC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRP 171 (571)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--cc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCC
Confidence 999999999999999999999999999999998888876 44 111123369999999999999999999999999999
Q ss_pred hhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 007405 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (605)
Q Consensus 207 ~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 286 (605)
+..++.+|||+...+.+++++.++|+|+|+..++|..++-.+..|++++.||.+.|.++.+++++++++++...+.|++.
T Consensus 172 ~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~ 251 (571)
T KOG1237|consen 172 CLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYK 251 (571)
T ss_pred cchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEee
Confidence 99999999999777777778889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccc---cCCCCCCcc
Q 007405 287 LPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKED---VINPSPWKL 363 (605)
Q Consensus 287 ~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 363 (605)
++.++|+..+.++++++.++++..++..+.. + +..........+.+..+++|+++.....+ ....++|++
T Consensus 252 ~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~-~------~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~l 324 (571)
T KOG1237|consen 252 KPRGSPKTRIGQVLVAAAFKRKAVVSLDPEE-L------YYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRL 324 (571)
T ss_pred CCCCCchhHHHHHHHHHHHHHhccCCCcchh-c------cccccccccccCCcccchhhHhhccCCcccccccccCCccC
Confidence 9999999999999999999999887766443 2 01111112233456778888888775432 224578999
Q ss_pred ccchhhhhhhhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhhhccCCCC-eeeCC-------------------------
Q 007405 364 CTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGK-LKLPV------------------------- 417 (605)
Q Consensus 364 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ip~------------------------- 417 (605)
|+.+++||.|..++++|+|...+.+++++.|+.+.+++|+..||++.+. +.+|+
T Consensus 325 ct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~ 404 (571)
T KOG1237|consen 325 CTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPF 404 (571)
T ss_pred CCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhh
Confidence 9999999999999999999999999999999999999999999999987 98888
Q ss_pred ----CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhh
Q 007405 418 ----TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVG 493 (605)
Q Consensus 418 ----~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~ 493 (605)
++...+.+.++|+++|+++..++|...+.+|..|++.+..+ ...+++ +|++|+++||+++|++|++..++
T Consensus 405 ~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~-----~~~~~~-mSi~W~iPQyvLig~~Evf~~vg 478 (571)
T KOG1237|consen 405 ARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSL-----LVETNP-MSILWQIPQYVLLGAGEVFTSVG 478 (571)
T ss_pred hhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhc-----cCCCCC-eeHHHHHHHHHHHHHHHHHHhhh
Confidence 22335779999999999999999999999999999887651 112356 99999999999999999999999
Q ss_pred hHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCC-CCCcCcchhHHHHHHHHHHHHHHH
Q 007405 494 LLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA-QNINTGRFDYLYWLLAVLSVINFC 572 (605)
Q Consensus 494 ~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~a~l~~v~~~ 572 (605)
.+||.++++|++||+.+++++.+..++|++++++++.++...++ + ..+|++ +++|.+|++++||+++.+..++..
T Consensus 479 ~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~--~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~ 554 (571)
T KOG1237|consen 479 GLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTG--K--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFL 554 (571)
T ss_pred hHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C--CcccCChhHhhhhHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999888664 2 468999 999999999999999999999999
Q ss_pred HHHHHHhhceecccC
Q 007405 573 AFLYSAYRYKYRSEQ 587 (605)
Q Consensus 573 ~~~~~~~~~~~~~~~ 587 (605)
.+..+.++|+++..+
T Consensus 555 ~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 555 YFLICAKRYDYKDDK 569 (571)
T ss_pred heEEEEEeeeecccc
Confidence 999999999887654
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-38 Score=328.03 Aligned_cols=438 Identities=17% Similarity=0.250 Sum_probs=331.6
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHH
Q 007405 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH----KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW 137 (605)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~----~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~ 137 (605)
....+++|.++.++.+|++||++|||+...+..|++.+++ ++.+++..+.+.|....++.+.+|||++||++|+|+
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 3456689999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 007405 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (605)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (605)
++..+.+++++|.+.++.+.. .....+++++.++++|.|.++++..++++|++|
T Consensus 94 tI~lGail~~iGh~~L~~~~~--------------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~ 147 (498)
T COG3104 94 TIVLGAILMAIGHLVLAISSV--------------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYP 147 (498)
T ss_pred HHHHHHHHHHHHHHHHhcccc--------------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcC
Confidence 999999999999999998620 245678999999999999999999999999999
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccC--CCCCchh-
Q 007405 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL--PGGSPLT- 294 (605)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~- 294 (605)
+++++ |..+++++|++.|+|+.++|++.+++.+++||+..|.+.++.+.++++.++++++...... +...|+.
T Consensus 148 ~~Dpr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~ 223 (498)
T COG3104 148 KDDPR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSF 223 (498)
T ss_pred CCCcc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhh
Confidence 99876 9999999999999999999999999999999999999999999999999988887665442 2222211
Q ss_pred -----HHHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchh-hHhhhhhcccc-CCCCCCccccch
Q 007405 295 -----RVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCL-DKAALELKEDV-INPSPWKLCTVT 367 (605)
Q Consensus 295 -----~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ 367 (605)
....++.....-. . .. +. ..+..+.. ........... ...-.+ .+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~------~~-~l----------------~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~ 276 (498)
T COG3104 224 NFLLPVLGGLVVMILAAL-L------TL-LL----------------NQNTFSGVLLVISILIAIIYFAEAFRS---PKV 276 (498)
T ss_pred hhhhhhHHHHHHHHHHHH-H------HH-HH----------------HHHHHHHHHHHHHHHHHHHHHHHHhcc---Ccc
Confidence 1111111111100 0 00 00 00000000 00000000000 000000 112
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhh-hccCCCCeeeCC-------------------------CCCC
Q 007405 368 QVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYT-MNTHMGKLKLPV-------------------------TCHP 421 (605)
Q Consensus 368 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ip~-------------------------~~~~ 421 (605)
. +|+|+++..+++++..++||+++.|+++.+..++.. .+++..++.+|+ .+..
T Consensus 277 ~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~ 355 (498)
T COG3104 277 F-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN 355 (498)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC
Confidence 3 788999999999999999999999999988777754 444545677777 2445
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhh
Q 007405 422 RGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEE 501 (605)
Q Consensus 422 ~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~ 501 (605)
+.++...|++.|+++++++++.+........ ..+ .. .|.+|++++|+++++||.+++|..++++.+.
T Consensus 356 ~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~---~~~---------~~-~s~~~lil~y~l~s~gEL~iSpvGLs~~t~l 422 (498)
T COG3104 356 KQPSTPIKFALGLILAGLGFLILLLAGIWFG---GPS---------GL-VSVWWLVLSYVLQSFGELFISPVGLSMVTKL 422 (498)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHhhc---CCC---------CC-cCHHHHHHHHHHHHHHHHHhCHHHHHHHHHh
Confidence 6789999999999999999998887643311 001 12 7899999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007405 502 APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 581 (605)
Q Consensus 502 ~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~ 581 (605)
+|+++++.++|+|.+....|+.++..+.+.... +. +..+......+|+.++...++..+......++.
T Consensus 423 aP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~-----------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~ 490 (498)
T COG3104 423 APPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD-----------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKL 490 (498)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhceecccccc-cc-----------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999999999999999999888763110 00 001112234578877777777766666665544
Q ss_pred e
Q 007405 582 K 582 (605)
Q Consensus 582 ~ 582 (605)
+
T Consensus 491 ~ 491 (498)
T COG3104 491 N 491 (498)
T ss_pred H
Confidence 4
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.3e-34 Score=315.36 Aligned_cols=446 Identities=12% Similarity=0.151 Sum_probs=311.7
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHH
Q 007405 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (605)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~ 142 (605)
..++|||.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+....++.++++|+++||++||||+++++
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999999999999945999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 007405 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (605)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (605)
.+++.++.++++++.. ....++++|+++|+|.|...|+..++++|++|+++++
T Consensus 88 ~~~~~~g~~~~~~~~~---------------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~ 140 (489)
T PRK10207 88 AIVLAIGYFMTGMSLL---------------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR 140 (489)
T ss_pred HHHHHHHHHHHHHhcc---------------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh
Confidence 9999999999987521 1234568899999999999999999999999987522
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccccc--CCCCCchhHHHHHH
Q 007405 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR--LPGGSPLTRVAQVL 300 (605)
Q Consensus 223 ~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~ 300 (605)
|.+.++++|++.|+|+.+||.+++++.++.||++.|++.++.+.++++.+...++.+++. ++.+++. |..+.+
T Consensus 141 ----~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~ 215 (489)
T PRK10207 141 ----LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPM-SFSKLL 215 (489)
T ss_pred ----hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccch-hhhhHH
Confidence 688999999999999999999999999999999999998776666666655555444332 2222222 222211
Q ss_pred HHHHHhhccccCccccccccccCCCcccccCCcccccCCCcch-hhHhhhhhccccCCCCCCccccchhhhhhhhhhhhh
Q 007405 301 VAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRC-LDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLV 379 (605)
Q Consensus 301 ~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 379 (605)
............- .+ . .+ +...... ........... . .++....++ .++++.+...
T Consensus 216 l~~~~~~~~~~~~--~~-~-~~--------------~~~~~~~~~~~~~~i~~~~---f-~~~~~~~~~-~~r~r~~~~~ 272 (489)
T PRK10207 216 LVLLGSVVMIFVC--AW-L-MH--------------NVEVANLVLIVLSIVVTII---F-FREAFKLDK-TGRNKMFVAF 272 (489)
T ss_pred HHHHHHHHHHHHH--HH-H-Hh--------------hhhHHHHHHHHHHHHHHHH---H-HHHHhcCCH-HHHHHHHHHH
Confidence 1100000000000 00 0 00 0000000 00000000000 0 000001112 3355555666
Q ss_pred hhhHHHHHHHHHHhhhhhHHHHHHh-hhccCCCCeeeCC-------------------------CCCCCCCChhHHHHHH
Q 007405 380 PIPACTIMLNVILTEFLTLSVQQAY-TMNTHMGKLKLPV-------------------------TCHPRGASQLQRVGIG 433 (605)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ip~-------------------------~~~~~~~~~~~~i~~G 433 (605)
.+++...++|..+.|..+.+..+.. ..+....++.+|+ +++...+++..|+.+|
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G 352 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLG 352 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHH
Confidence 6777788999999998776655554 4555555666654 3344457888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHH
Q 007405 434 LAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY 513 (605)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~ 513 (605)
+++.+++++.++..+... ...+ .. .+.+|+++.+++.|+||++.+|..++++.+.+|++++|.++|+
T Consensus 353 ~~l~~~~~~~~~~~~~~~---~~~~---------~~-~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~ 419 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWF---ADAQ---------GL-TSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGM 419 (489)
T ss_pred HHHHHHHHHHHHHHHHhh---cCCC---------Cc-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHH
Confidence 999999987765432110 0000 12 5789999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhceec
Q 007405 514 AALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 584 (605)
Q Consensus 514 ~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~ 584 (605)
+++.+++|+.++..+...... .. ...... ....++..+|..+++.+++..++++++.++.++.
T Consensus 420 ~~l~~~ig~~lg~~l~~~~~~-~~---~~~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 420 WFLTQAAAFLLGGYVATFTAV-PD---NITDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-cc---ccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988875431 00 000000 0112356678888888888777777776665544
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=2.1e-34 Score=313.60 Aligned_cols=429 Identities=14% Similarity=0.147 Sum_probs=310.1
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~ 141 (605)
..++++.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++.+++++++|+++||++|||+++++
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 346778899999999999999999999999999988 999999999999999999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 007405 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (605)
+.+++.++.++++++ .+...+++++++.|+|.|...++..++++|++|+++.
T Consensus 85 ~~~~~~~g~~~~~~~----------------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~ 136 (475)
T TIGR00924 85 GGIVLMLGHFMLAMS----------------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM 136 (475)
T ss_pred HHHHHHHHHHHHHhc----------------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc
Confidence 999999999888875 3456778899999999999999999999999987642
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHH-----
Q 007405 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRV----- 296 (605)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----- 296 (605)
+ .|+++++++|++.|+|+.+||.+++++.++.||++.|++.++.++++++.+...++.+++.++++++....
T Consensus 137 ~---~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (475)
T TIGR00924 137 P---RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYG 213 (475)
T ss_pred c---cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhH
Confidence 1 18889999999999999999999999999999999999988777777666665555544332222211100
Q ss_pred HH--H----HHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhh
Q 007405 297 AQ--V----LVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVE 370 (605)
Q Consensus 297 ~~--v----~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (605)
.+ . +....+... ...+ ... ...+. ............... .+| ..++ .
T Consensus 214 ~~~~~~~~~~~~~~~~~~----------~~~~--~~~----~~~~~-----~~~~~~~~~~~~~~~-~~~----~~~~-~ 266 (475)
T TIGR00924 214 KLLLALLAALALVFFCAW----------LMHH--VVI----ANILL-----MTVTLAVIIFFFRLA-FKP----RLDA-V 266 (475)
T ss_pred HHHHHHHHHHHHHHHHHH----------HHhc--cHH----HHHHH-----HHHHHHHHHHHHHHH-Hhc----cCCH-H
Confidence 00 0 000001000 0000 000 00000 000000000000000 001 0112 2
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHhhhhhHHHH-HHhhhccCCCCeeeCC-------------------------CCCCCCC
Q 007405 371 EVKTLVRLVPIPACTIMLNVILTEFLTLSVQ-QAYTMNTHMGKLKLPV-------------------------TCHPRGA 424 (605)
Q Consensus 371 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ip~-------------------------~~~~~~~ 424 (605)
++++....+++++...++|+.+.|+.+.+.. +...+|....++.+|+ +++.+.+
T Consensus 267 ~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~ 346 (475)
T TIGR00924 267 ARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDP 346 (475)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3344456788889999999999999986544 4455677766777766 2222446
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcch
Q 007405 425 SQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPD 504 (605)
Q Consensus 425 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~ 504 (605)
+...|+.+|+++.+++++.+++.... .. .+.+ .+++|+++++++.++||.+..|..++++.+.+|+
T Consensus 347 ~~~~k~~~G~~l~~~~~~~~~~~~~~----~~---------~~~~-~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~ 412 (475)
T TIGR00924 347 TTPLKFTLGMLFCGASFLTFAASIWF----AD---------AGGL-TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ 412 (475)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhh----cC---------CCCc-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH
Confidence 77778999999999999888765211 10 0123 7899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhce
Q 007405 505 AMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYK 582 (605)
Q Consensus 505 ~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~ 582 (605)
++||+++|++.+...+|+.+++.+........ +| ..+|..++++.++..+++++..++.+
T Consensus 413 ~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 413 RLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ--------GV----------TGVFGKIGLVTLLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------ch----------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887654311 23 35677777777777777766665544
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=3.3e-33 Score=300.31 Aligned_cols=445 Identities=14% Similarity=0.177 Sum_probs=308.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
+|++.++.++..++++++++|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+++.... .+...++++..+.++|.|...++..++++|+||+++++
T Consensus 86 ~~lg~lll~~~~---------------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~--- 135 (493)
T PRK15462 86 MAIGHVVLGASE---------------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR--- 135 (493)
T ss_pred HHHHHHHHHHhh---------------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc---
Confidence 999887665421 11233455556677888888899999999999987422
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccC-CCCCchh--HHH----H
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL-PGGSPLT--RVA----Q 298 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~--~~~----~ 298 (605)
|.++++++|...|+|+.++|.+++++.+.+||++.|.+.++.++++++.++..++.+.+.. ...+|.. +.. .
T Consensus 136 -R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 214 (493)
T PRK15462 136 -RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWG 214 (493)
T ss_pred -ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHH
Confidence 9999999999999999999999999999999999999988877777777666554433211 0111111 100 0
Q ss_pred HHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchh-hHhhhhhccccCCCCCCccccchhhhhhhhhhh
Q 007405 299 VLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCL-DKAALELKEDVINPSPWKLCTVTQVEEVKTLVR 377 (605)
Q Consensus 299 v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 377 (605)
.+....--. + . +... .+.+. ..... -........-.. ... ......+|+|++..
T Consensus 215 ~~~~~~~~~----~----~-~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~er~r~~~ 269 (493)
T PRK15462 215 WLLVLLVAT----P----A-LITV-----------LFWKE-WSVYALIVATIIGLGVLA--KIY--RKAENQKQRKELGL 269 (493)
T ss_pred HHHHHHHHH----H----H-HHHH-----------HHHHH-HHHHHHHHHHHHHHHHHH--HHH--HhcCCHHHHhhHHH
Confidence 000000000 0 0 0000 00000 00000 000000000000 000 00011367889889
Q ss_pred hhhhhHHHHHHHHHHhhhhhHHHHHH-hhhccCCCCeeeCC-------------------------CCCCCCCChhHHHH
Q 007405 378 LVPIPACTIMLNVILTEFLTLSVQQA-YTMNTHMGKLKLPV-------------------------TCHPRGASQLQRVG 431 (605)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ip~-------------------------~~~~~~~~~~~~i~ 431 (605)
.+++++..++||..|.|.++.+...+ .+.|+++.++.+|+ .++++.++...|++
T Consensus 270 ~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa 349 (493)
T PRK15462 270 IVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFA 349 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHH
Confidence 99999999999999999999665555 56788888898887 22344678889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHH
Q 007405 432 IGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGS 511 (605)
Q Consensus 432 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~ 511 (605)
+|+++.+++++++.+..... ..++ . .+.+|++..|++.++||.+.+|..++++.+.+|++.+|+.|
T Consensus 350 ~g~~~~g~~f~~l~~~~~~~----~~~~---------~-~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~m 415 (493)
T PRK15462 350 LGLGLMSAGFCILTLSARWS----AMYG---------H-SSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLT 415 (493)
T ss_pred HHHHHHHHHHHHHHHHHhhc----CCCC---------C-cCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHH
Confidence 99999999998887653211 1111 2 68899999999999999999999999999999999999999
Q ss_pred HHHHHH-hhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHH--HHHHHHHHhhceeccc
Q 007405 512 AYAALA-GGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVIN--FCAFLYSAYRYKYRSE 586 (605)
Q Consensus 512 g~~~~~-~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~--~~~~~~~~~~~~~~~~ 586 (605)
|++.+. ..+|+.++..+......... +.... ..+ +..++..+|..++...++. ++.+.+.++..|.|++
T Consensus 416 g~w~l~~~~~~~~~~g~~~~~~~~~~~---~~~~~-~~~--~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (493)
T PRK15462 416 GIYMLLSGAIANYLAGVIADQTSQASF---DASGA-INY--SINAYIEVFDQITWGALACVGVVLMIWLYQALKFRNR 487 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC---Ccccc-ccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999885 47899888888775532110 00000 000 1123556677766655444 5555555665665544
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=8e-33 Score=302.88 Aligned_cols=438 Identities=15% Similarity=0.204 Sum_probs=308.9
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~ 143 (605)
..++++.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+....+..++++|+++||++|||++++++.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~ 95 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGA 95 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 34667789999999999999999999999999999999999999999888888888888899999999449999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
+++.++..+++++. .+...++++++++|+|.|...++..++++|++|+++.+
T Consensus 96 ~~~~ig~~l~~~~~---------------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~- 147 (500)
T PRK09584 96 IVLAIGYALVAWSG---------------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR- 147 (500)
T ss_pred HHHHHHHHHHHHhc---------------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh-
Confidence 99999988887651 13456678889999999999999999999999876522
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccccc--CCCCCchhH------
Q 007405 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR--LPGGSPLTR------ 295 (605)
Q Consensus 224 ~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~------ 295 (605)
|..+++++|++.++|+.+||.+++++.+++||++.|++.++..+++++.++..++..++. ++++++...
T Consensus 148 ---~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (500)
T PRK09584 148 ---LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLT 224 (500)
T ss_pred ---hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHH
Confidence 567889999999999999999999999999999999998877666665554444333222 222222211
Q ss_pred HHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhh
Q 007405 296 VAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTL 375 (605)
Q Consensus 296 ~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 375 (605)
...+........ + ...+. + ... ....+........... ..+..++ .++++.
T Consensus 225 ~~~~~~~~~~~~---------~-~~~~~--~--------~~~-~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~ 275 (500)
T PRK09584 225 IVGVVALIAIAT---------W-LLHNQ--E--------IAR-MALGVVALGIVVIFGK-------EAFAMKG-AARRKM 275 (500)
T ss_pred HHHHHHHHHHHH---------H-HHhcc--h--------HHH-HHHHHHHHHHHHHHHH-------HHhhcCH-HHHHHH
Confidence 111111111100 0 00000 0 000 0000000000000000 0011122 345666
Q ss_pred hhhhhhhHHHHHHHHHHhhhhhHHHHHHh-hhccCCCCeeeCC----------------------CCCCCCCChhHHHHH
Q 007405 376 VRLVPIPACTIMLNVILTEFLTLSVQQAY-TMNTHMGKLKLPV----------------------TCHPRGASQLQRVGI 432 (605)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ip~----------------------~~~~~~~~~~~~i~~ 432 (605)
+..+.+++..++||..+.|+++.+..+.. ..+....++.+|+ ++..++.+..+++.+
T Consensus 276 ~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~ 355 (500)
T PRK09584 276 IVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAI 355 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHH
Confidence 66677788889999999999998777664 3555666777763 455666778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHH
Q 007405 433 GLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSA 512 (605)
Q Consensus 433 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 512 (605)
|+++++++++.+...... ...+ .. .+.+|+++++++.++||++..|..++++.+.+|+++||+++|
T Consensus 356 G~~l~~l~f~~l~~~~~~----~~~~---------~~-vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g 421 (500)
T PRK09584 356 GMVLCSGAFLVLPLGAKF----ANDA---------GI-VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMG 421 (500)
T ss_pred HHHHHHHHHHHHHHHHHh----cCCC---------Cc-cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHH
Confidence 999999999887765321 1111 13 678899999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC-CcCcchhHHHHHHHHHHHHHHHHHHHHHhhceec
Q 007405 513 YAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQN-INTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 584 (605)
Q Consensus 513 ~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~-~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~ 584 (605)
++.+...+|+.++..+...... . . -..+. ...+.+..+|..+++++++..++++...++.++.
T Consensus 422 ~~~l~~a~g~~~~g~~~~~~~~-~---~-----~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~ 485 (500)
T PRK09584 422 SWFLTTAGAALIAGYVANLMAV-P---D-----NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRM 485 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-c---c-----ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888764321 0 0 00000 0112356778888877777666666666655544
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.98 E-value=8.1e-29 Score=275.06 Aligned_cols=310 Identities=24% Similarity=0.421 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007405 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (605)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (605)
++|||+.+.+..|+++.+|++.+.+..+.+.|....++.+++||+++|+++||+++++++.+++.+|.+++++++..+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999988875432111
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 007405 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (605)
Q Consensus 163 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 242 (605)
.+ ......++++.+.++|.|+++|+..++++|++++++. +.|.++++++|++.|+|+
T Consensus 81 ~~--------------------~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGS 137 (654)
T TIGR00926 81 HP--------------------LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGS 137 (654)
T ss_pred cc--------------------hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHH
Confidence 11 2344567888999999999999999999999986432 238999999999999999
Q ss_pred HHHHHHHHHHHhhh-------chHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccc
Q 007405 243 IVAFTLVVYIQMEH-------GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSE 315 (605)
Q Consensus 243 ~i~p~i~~~l~~~~-------gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~ 315 (605)
.+++++.+++.+.. +|.++|.+++++++++++++...++.+++.++.++++....++++.+.+++....++
T Consensus 138 lis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~-- 215 (654)
T TIGR00926 138 LISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE-- 215 (654)
T ss_pred HHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc--
Confidence 99999999998543 699999999999999999998888888888888888888888887777654321100
Q ss_pred cccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHHHhhh
Q 007405 316 LIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEF 395 (605)
Q Consensus 316 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 395 (605)
....+++|.+... ...++++++|++++++++++...+||..+.|+
T Consensus 216 ----------------------~~~~~~ld~a~~~-------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~ 260 (654)
T TIGR00926 216 ----------------------HWPLHWLDYAKDK-------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQ 260 (654)
T ss_pred ----------------------ccchhHHHHhccc-------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0002333333221 12345688999999999999999999999999
Q ss_pred hhHHHHHHhhhccCCCCeeeCC--------------------------CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 007405 396 LTLSVQQAYTMNTHMGKLKLPV--------------------------TCHPRGASQLQRVGIGLAVSILSVIWAGIFER 449 (605)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~ip~--------------------------~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~ 449 (605)
.+.+..|+..++.+++++.+|+ ++++..+++.+|+++|+++++++++++++.+.
T Consensus 261 ~s~~~~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~ls~l~k~~iG~~la~la~~va~~ve~ 340 (654)
T TIGR00926 261 GSRWTLQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTRFTSLRKMAVGGLLAALSFFVAALVQL 340 (654)
T ss_pred hhHHHHHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888777777666 33334578899999999999999999998887
Q ss_pred HHH
Q 007405 450 YRR 452 (605)
Q Consensus 450 ~~~ 452 (605)
.+.
T Consensus 341 ~~~ 343 (654)
T TIGR00926 341 KVN 343 (654)
T ss_pred HHh
Confidence 755
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=3e-25 Score=249.60 Aligned_cols=153 Identities=14% Similarity=0.050 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 007405 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (605)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (605)
+...+.+++.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++..++.++++++
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa----------- 252 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV----------- 252 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 345566778889999999999999999999999999999999997 99999999999999888888775
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 007405 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (605)
Q Consensus 168 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~ 247 (605)
.+.+.++++|++.|++.|+..++..++++|.+|++. |++.+++......+|.++++.
T Consensus 253 -----------------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~ 309 (742)
T TIGR01299 253 -----------------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAA 309 (742)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999998 999999999999999999998
Q ss_pred HHHHHHhh-------------hchHHHHHHHHHHHHHHHHH
Q 007405 248 LVVYIQME-------------HGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 248 i~~~l~~~-------------~gw~~~f~~~~~~~~i~~~~ 275 (605)
++.++... .+||+.+++.++..++.+++
T Consensus 310 la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~ 350 (742)
T TIGR01299 310 MAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGA 350 (742)
T ss_pred HHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHH
Confidence 87666543 35888888777665555443
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=1e-23 Score=224.46 Aligned_cols=363 Identities=13% Similarity=0.091 Sum_probs=240.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
.+|..++.+.+..++.....+...+ +.+.+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVG-LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHc-chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 3455556555555554444443323 34567889999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
+.++.+.+.++ .+.+.++++|+++|++.+...+...+++.|++|+++
T Consensus 84 ~~~~~~~~~~~----------------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~----- 130 (390)
T PRK03545 84 FIASHVLSALA----------------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK----- 130 (390)
T ss_pred HHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh-----
Confidence 99998888876 578889999999999999888999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 305 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 305 (605)
|++.++++..+.++|..++|.+++.+.+..|||+.|++.++..++..+..+...++.+++ ++++..+.. .
T Consensus 131 -r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~----~--- 200 (390)
T PRK03545 131 -KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE--HSGSLKSLP----L--- 200 (390)
T ss_pred -hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--CcchHHHHH----H---
Confidence 999999999999999999999999999989999999998876655544433322221110 000000000 0
Q ss_pred hhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhh-hhhhhHH
Q 007405 306 KRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVR-LVPIPAC 384 (605)
Q Consensus 306 ~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~ 384 (605)
+ ..+ +.+.. ....++.
T Consensus 201 -------------~-------------------------------------------------~~~-~~~~~~~~~~~~~ 217 (390)
T PRK03545 201 -------------L-------------------------------------------------FRR-PALVSLYLLTVVV 217 (390)
T ss_pred -------------H-------------------------------------------------HhC-cHHHHHHHHHHHH
Confidence 0 000 11111 1111111
Q ss_pred HHHHHHHHhhhhhHHHHHHhhhccCCCCee------------eCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 385 TIMLNVILTEFLTLSVQQAYTMNTHMGKLK------------LPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRR 452 (605)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~ 452 (605)
...++..+..... +.....+++....+.. +..++..+|.+.+ ++..+..+..+++..+....
T Consensus 218 ~~~~~~~~~~~~~-~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-~~~~~~~~~~~~~~~l~~~~---- 291 (390)
T PRK03545 218 VTAHFTAYSYIEP-FVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-FLLIAIALLLVCLLLLLPAA---- 291 (390)
T ss_pred HHHHHHHHHHHHH-HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHh----
Confidence 1112222111111 2222122222211110 0003333444332 34455554444443332221
Q ss_pred HHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHh
Q 007405 453 NYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSII 532 (605)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 532 (605)
.+.+.++...++.|++.+...+.....+.+..| +.|+.++|+++....+|..+|+.+.+.+
T Consensus 292 ------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~ 352 (390)
T PRK03545 292 ------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQV 352 (390)
T ss_pred ------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244555666777888888777888888888877 5789999999999999999999999988
Q ss_pred hcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007405 533 KSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 579 (605)
Q Consensus 533 ~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 579 (605)
.+..+ +...|++.+++.++++++++...+
T Consensus 353 ~~~~g------------------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 353 SLHLG------------------LSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HhccC------------------hhHHHHHHHHHHHHHHHHHHHHcc
Confidence 77443 456788888888888888766653
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=2.6e-23 Score=221.88 Aligned_cols=366 Identities=12% Similarity=0.015 Sum_probs=242.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
.++.+..+.+..++..++.....+.++.|+.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 334577777888888888777788899999999999999999999999999999999999999997 9999999999988
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.++.+.+.++...... + ..+...+++.|+++|++.+...+...+++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~~~~~-~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------ 145 (399)
T PRK05122 92 ALSGLLYLLAGLLAAW-P-------------------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------ 145 (399)
T ss_pred HHHHHHHHHhhhhhcc-c-------------------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------
Confidence 8877666554211000 0 0246678999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHh
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 306 (605)
|++.++++..+.++|..+||.+++++.+..||++.+++..+..++..+. ..+ .+..++.+++..+..
T Consensus 146 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~--------- 212 (399)
T PRK05122 146 TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL---ARP-RPAVPPVKGERLPFR--------- 212 (399)
T ss_pred hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH---Hhc-CCCCCCCCccchhHH---------
Confidence 9999999888999999999999999999999999887765544332221 111 111000000000000
Q ss_pred hccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhh-hhhHHH
Q 007405 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLV-PIPACT 385 (605)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~ 385 (605)
+..|...... ...+..
T Consensus 213 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~ 229 (399)
T PRK05122 213 ---------------------------------------------------------------RVLGRVWPYGMGLALAS 229 (399)
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHHHHHH
Confidence 0000000000 000111
Q ss_pred HHHHHHHhhhhhHHHHHHhhhccCCCCe----------eeCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 386 IMLNVILTEFLTLSVQQAYTMNTHMGKL----------KLPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYA 455 (605)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 455 (605)
..+........ .+.. ..+.+...... .+..++..+|.+.++.+..+.++.+++++.+...
T Consensus 230 ~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------- 299 (399)
T PRK05122 230 IGFGTIATFIT-LYYA-ARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------- 299 (399)
T ss_pred HHHHHHHHHHH-HHHH-HcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh--------
Confidence 11111111111 1111 11111000000 0000223334444455556666666665554433
Q ss_pred hhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcc
Q 007405 456 ISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSV 535 (605)
Q Consensus 456 ~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~ 535 (605)
.+.+++++..++.|++.+...+.......+..|++.||+++|+++....+|..+++.+.+.+.+.
T Consensus 300 ---------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 300 ---------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW 364 (399)
T ss_pred ---------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23445566678889998888888888888999999999999999999999999999998887663
Q ss_pred cCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007405 536 TGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSA 578 (605)
Q Consensus 536 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 578 (605)
.+ ++..|++.+++.++++++.+++.
T Consensus 365 ~g------------------~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 365 FG------------------YPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred cC------------------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 32 46678887777777766655543
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=3.8e-23 Score=220.82 Aligned_cols=333 Identities=15% Similarity=0.168 Sum_probs=229.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~ 151 (605)
+.++...++...+.+.+.+.++.|+++++|+|..+.+.+.+.+.+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5666888888999999999999999999999999999999999999999999999999997 999999999999999888
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHH
Q 007405 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (605)
Q Consensus 152 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~ 231 (605)
.+.+. .+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++
T Consensus 92 ~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~ 137 (400)
T PRK11646 92 TMAIA----------------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFF 137 (400)
T ss_pred HHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHH
Confidence 88765 467788899999999999888999999999999888 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhcccc
Q 007405 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAF 311 (605)
Q Consensus 232 ~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 311 (605)
++.+...++|..+||.+++++. .+||++.|++.++..++..++..+..++.+.. +..++... -+..
T Consensus 138 ~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~---~~~~--------- 203 (400)
T PRK11646 138 SLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-TVRTPVRE---GMTR--------- 203 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc-ccchhhHH---HHHH---------
Confidence 9999999999999999999998 67999999988776655544433333321110 00000000 0000
Q ss_pred CccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHH
Q 007405 312 SSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVI 391 (605)
Q Consensus 312 p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 391 (605)
+ ..+++ ++.... ....++..
T Consensus 204 -------~-------------------------------------------------~~~~~-~~~~~~---~~~~~~~~ 223 (400)
T PRK11646 204 -------V-------------------------------------------------LRDKR-FVTYVL---TLTGYYML 223 (400)
T ss_pred -------H-------------------------------------------------HcCch-HHHHHH---HHHHHHHH
Confidence 0 00011 111100 00111111
Q ss_pred Hhhh---hhHHHHHHhhhccCCCC-----------eeeCCCCC-CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 392 LTEF---LTLSVQQAYTMNTHMGK-----------LKLPVTCH-PRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAI 456 (605)
Q Consensus 392 ~~~~---~~~~~~~~~~~~~~~~~-----------~~ip~~~~-~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~ 456 (605)
+.+. ...+.....+.+...+. ...+..+. .++.+..+++..++++.+++++.++..
T Consensus 224 ~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~--------- 294 (400)
T PRK11646 224 AVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV--------- 294 (400)
T ss_pred HHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh---------
Confidence 1111 11111111110100000 01111221 223334445566666666666555433
Q ss_pred hcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhccc
Q 007405 457 SHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVT 536 (605)
Q Consensus 457 ~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~ 536 (605)
.+.++++...++.+++.+...|...+.+.+.+|++.||+++|+.++...+|..+|+.+.+.+.+.+
T Consensus 295 --------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~ 360 (400)
T PRK11646 295 --------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLG 360 (400)
T ss_pred --------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHH
Confidence 233444445566788888899999999999999999999999999999999999999999987743
No 12
>PRK12382 putative transporter; Provisional
Probab=99.93 E-value=9.2e-23 Score=217.23 Aligned_cols=363 Identities=12% Similarity=0.026 Sum_probs=234.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++.+.+..++..++.+...+.++.|+.+++|.|..+.+++.+.+.++..++.++.|+++||+ ||||+++++.++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLA 94 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHH
Confidence 456666667777777767778888899999999999999999999999999999999999997 9999999998877766
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+...++...+.. .. .+...++++|+++|++.+...+...+++.|.+|+++ |++
T Consensus 95 ~~~~~~~~~~~~~-~~-------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (392)
T PRK12382 95 GLAYLLAAILPVS-AP-------------------FKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGK 148 (392)
T ss_pred HHHHHhhhccccc-hh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cch
Confidence 5544332111100 00 367889999999999999888888899999999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhcc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 309 (605)
+++++..+.++|..++|.+++++.+..||++.+.+..+..++... ...+ .++.+++++...+..+
T Consensus 149 a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~----------- 213 (392)
T PRK12382 149 VMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FNGT-VRKVPAHAGERPSLWS----------- 213 (392)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HHHh-ccCCCCCcccCchHHH-----------
Confidence 999999999999999999999999989999877655443322221 1111 1110000000000000
Q ss_pred ccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhh-hhhhhHHHHHH
Q 007405 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVR-LVPIPACTIML 388 (605)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~ 388 (605)
..|.+.. .....+....+
T Consensus 214 -------------------------------------------------------------~~~~~~~~~~~~~l~~~~~ 232 (392)
T PRK12382 214 -------------------------------------------------------------VVGLIWKPGLGLALQGVGF 232 (392)
T ss_pred -------------------------------------------------------------HHHHHHHhHHHHHHHHHHH
Confidence 0000000 00000000111
Q ss_pred HHHHhhhhhHHHHHHhhhccCC-----CCe-----eeCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 389 NVILTEFLTLSVQQAYTMNTHM-----GKL-----KLPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISH 458 (605)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~-----~~~-----~ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (605)
........ .+..+ .+.+... .+. ....++..++.+.++.+..+..+.+++++.....
T Consensus 233 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~----------- 299 (392)
T PRK12382 233 AVIGTFVS-LYFAS-KGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA----------- 299 (392)
T ss_pred hHHHHHHH-HHHHh-cCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-----------
Confidence 11100000 11110 0000000 000 0000222333333344555666666665544432
Q ss_pred CccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCC
Q 007405 459 GYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGN 538 (605)
Q Consensus 459 ~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~ 538 (605)
.+.++..+..++.+++.+...+.......+..|++.||++.|+++....+|..+++.+.+.+.+..|
T Consensus 300 ------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g- 366 (392)
T PRK12382 300 ------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG- 366 (392)
T ss_pred ------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 2344555667778888888888888888999999999999999999999999999999998876333
Q ss_pred CCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007405 539 PKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSA 578 (605)
Q Consensus 539 ~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 578 (605)
+...|++.+++.++++++.+...
T Consensus 367 -----------------~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 367 -----------------YPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred -----------------chHHHHHHHHHHHHHHHHHHhhc
Confidence 35678888877777777665443
No 13
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=1.4e-22 Score=221.13 Aligned_cols=389 Identities=12% Similarity=0.036 Sum_probs=239.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~ 147 (605)
.+.++.+.+..++..+..+.+.+.++.|. +++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 44577788888888888888888777776 56999999999999999999999999999999997 99999999998888
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++.+.+.++ .+...++++|+++|++.++..+...+++.|.+|+++ |
T Consensus 87 ~~~~~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~ 132 (471)
T PRK10504 87 LGSLFCALS----------------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------Y 132 (471)
T ss_pred HHHHHHHHh----------------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------H
Confidence 888777664 467788899999999999999999999999999888 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhh
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKR 307 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 307 (605)
++.+++.+...++|..++|.+++++.+..||++.|++..+...+..+......++.+..+.+.+ ..+.........
T Consensus 133 ~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~ 208 (471)
T PRK10504 133 MAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFD----LSGFLLLAVGMA 208 (471)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCC----hHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877666555554444443222111111 111110000000
Q ss_pred ccccCccccccccccCCCcccccCCcccccCCCcchhhHh-----hhhhccccCCCCCCccccchhhhhhhhhhhhhhhh
Q 007405 308 HAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKA-----ALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIP 382 (605)
Q Consensus 308 ~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 382 (605)
.. .+...+.+. .. . ............ .....+.. ...+. .. .+....|.+...+
T Consensus 209 ~~---------~~~~~~~~~--~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~-~~l~~~~~~~~~l--- 267 (471)
T PRK10504 209 TL---------TLALDGSKG--LG--L-SPLAIAGLVAVGVVALLLYLLHARN-NNRAL--FS-LKLFRTRTFSLGL--- 267 (471)
T ss_pred HH---------HHHHhcCCc--CC--c-chHHHHHHHHHHHHHHHHHHHHHhc-CCCCc--cC-HHHhcccchHHHH---
Confidence 00 000000000 00 0 000000000000 00000000 00000 00 0000111111111
Q ss_pred HHHHHHHHHH---hhhhhHHHHHHhhhccCCCCee--------e---C-CCCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007405 383 ACTIMLNVIL---TEFLTLSVQQAYTMNTHMGKLK--------L---P-VTCHPRGASQLQRVGIGLAVSILSVIWAGIF 447 (605)
Q Consensus 383 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------i---p-~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~ 447 (605)
....+.+..+ ......+.++..+.+....++. + + ..+..+|.+.++.+.+|..+.+++...+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 268 AGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 1111111111 1122223222222221111110 0 1 1334455555565666666666555444432
Q ss_pred HHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHH
Q 007405 448 ERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASI 527 (605)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~ 527 (605)
. .. .+.+++...+++.|++.++..+..+....+.+|++.+|.++|+.++.+.+|..+|+.
T Consensus 348 ~-------------------~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 407 (471)
T PRK10504 348 A-------------------LL-GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVT 407 (471)
T ss_pred c-------------------cc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHH
Confidence 1 01 223333445667788888999999999999999999999999999999999999999
Q ss_pred HHHHhhcccC
Q 007405 528 LNSIIKSVTG 537 (605)
Q Consensus 528 l~~~i~~~~~ 537 (605)
+.+.+.+..+
T Consensus 408 i~g~ll~~~g 417 (471)
T PRK10504 408 IAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHhh
Confidence 9998876544
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=6.6e-23 Score=225.09 Aligned_cols=392 Identities=14% Similarity=0.066 Sum_probs=239.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
+|..+..+.+..++..+....+.+.+| .+.+++|.+..+.+|+.+.|.++..++.+++|+++||+ |||++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 456677777777777777665655555 55688999999999999999999999999999999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccC-CCCCchhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF-DERSKDYKT 225 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~-~~~~~~~~~ 225 (605)
.++.+.++++ .+.+.++++|+++|+|.++..+.....+.+.+ |+++
T Consensus 82 ~~~~~~~~~a----------------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~----- 128 (495)
T PRK14995 82 GLASLAAAFS----------------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ----- 128 (495)
T ss_pred HHHHHHHHHc----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH-----
Confidence 9999999886 57889999999999999998888888887776 5566
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 305 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 305 (605)
|+++++++....++|..+||.+++++.++.||||.|++...+.++.+++.....++.+.++. ++ .|..+.+.....
T Consensus 129 -r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~--~~-~d~~g~~~~~~~ 204 (495)
T PRK14995 129 -RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRD--QP-LNLGHALMLIVA 204 (495)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CC-CChHhHHHHHHH
Confidence 99999999999999999999999999999999999999887766665555554444322111 11 121111111000
Q ss_pred hhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCC---Cccccchhhhhhhhhhhhhhh-
Q 007405 306 KRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSP---WKLCTVTQVEEVKTLVRLVPI- 381 (605)
Q Consensus 306 ~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~k~~~~~~~~- 381 (605)
....... + ....+. ......+...-.............+.. ...| +++++ + +.+......
T Consensus 205 ~~~l~~~------~-~~~~~~--~~~~~~~~~~~~~~~~~l~~f~~~e~~-~~~p~~~~~lf~-----~-~~~~~~~~~~ 268 (495)
T PRK14995 205 ILLLVYS------A-KTALKG--FLSLWVTSLTLLTGALLLGLFIRTQLA-ASRPMIDMRLFT-----H-RIILSGVVMA 268 (495)
T ss_pred HHHHHHH------H-Hhcccc--CCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcCHHHhC-----C-cccHHHHHHH
Confidence 0000000 0 000000 000000000000000000000000000 0111 11111 1 111111111
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHhhhccCCCCe-ee----------CC-CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 007405 382 PACTIMLNVILTEFLTLSVQQAYTMNTHMGKL-KL----------PV-TCHPRGASQLQRVGIGLAVSILSVIWAGIFER 449 (605)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i----------p~-~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~ 449 (605)
++....++. +......+.+...+.+....+. .. +. ++..+|.+.+..+..|+++.+++++.+.....
T Consensus 269 ~~~~~~~~~-~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~ 347 (495)
T PRK14995 269 MTAMITLVG-FELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDF 347 (495)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 111111111 1111112222222222211111 11 11 22333444445566777777777665544310
Q ss_pred HHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHH
Q 007405 450 YRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILN 529 (605)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~ 529 (605)
. .+.+......++.|+|.++..++....+.+.+|++.++.+++++++.+.+|..+|+.+.
T Consensus 348 -------------------~-~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 348 -------------------S-TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred -------------------C-CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 1 23444556778889999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 007405 530 SIIKS 534 (605)
Q Consensus 530 ~~i~~ 534 (605)
+.+.+
T Consensus 408 g~i~~ 412 (495)
T PRK14995 408 GLLLS 412 (495)
T ss_pred HHHHH
Confidence 98754
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.92 E-value=1.6e-22 Score=216.33 Aligned_cols=178 Identities=17% Similarity=0.165 Sum_probs=151.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
+.+|..+...+...+++.+..+...... +.+.+++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAA-PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 4667677777777888777776655544 456678999999999999999999999999999999997 99999999998
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
+..++.+.+.++ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 89 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 136 (406)
T PRK11551 89 LFGLFSLATAQA----------------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL---- 136 (406)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH----
Confidence 888887777665 467888899999999999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
|++.+++++...++|..++|.+++.+.+..+|++.|++.+++.++..++...
T Consensus 137 --r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (406)
T PRK11551 137 --RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMR 188 (406)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988888889999999877655544444333
No 16
>PRK10054 putative transporter; Provisional
Probab=99.92 E-value=8e-23 Score=217.93 Aligned_cols=343 Identities=13% Similarity=0.096 Sum_probs=231.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
.+|.++.+.+..++...+.+.+.++++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 445677888888999999888999999999999999999999999999999999999999999997 9999999999888
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.++.+.+.++ .+.+.+++++.+.|.+.+...++..++.+|.+|+++
T Consensus 84 ~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 129 (395)
T PRK10054 84 ASGFIAIPLV----------------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------ 129 (395)
T ss_pred HHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------
Confidence 8888777765 456667777888888878778889999999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHh
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 306 (605)
|++.+++.+...++|..++|.+++++.+ .+|+.+|++.+++.++.++...+..++.++.+++.+ ..
T Consensus 130 ~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~--~~----------- 195 (395)
T PRK10054 130 KTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET--GS----------- 195 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccch--hh-----------
Confidence 9999999999999999999999999875 689999998877766665444333322111100000 00
Q ss_pred hccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhh-hhhhHHH
Q 007405 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRL-VPIPACT 385 (605)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~ 385 (605)
.+ +. . +-.++ |.++.. +..++..
T Consensus 196 ---------~~---------------------------~~--------------~-----~~~~~-~~~~~~~~~~~l~~ 219 (395)
T PRK10054 196 ---------VW---------------------------SP--------------S-----VLLQD-KALLWFTCSGFLAS 219 (395)
T ss_pred ---------hh---------------------------hh--------------h-----hhccC-ceehHHHHHHHHHH
Confidence 00 00 0 00000 111111 1111111
Q ss_pred HHHHHHHhhhhhHHHH-HHhhhccCC-------C-CeeeC----CCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 386 IMLNVILTEFLTLSVQ-QAYTMNTHM-------G-KLKLP----VTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRR 452 (605)
Q Consensus 386 ~~~~~~~~~~~~~~~~-~~~~~~~~~-------~-~~~ip----~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~ 452 (605)
..+............. +....+... . ...++ .++..++.+.+..+.+|+++.++++..+....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---- 295 (395)
T PRK10054 220 FVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG---- 295 (395)
T ss_pred HHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc----
Confidence 1111111111111100 000000000 0 01111 13444455555666677766666665544321
Q ss_pred HHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHh
Q 007405 453 NYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSII 532 (605)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 532 (605)
.+.+.+.+..++.++|++...|..++.+.+.+|++.||.+.+..+ ...+|..+|+.+.+.+
T Consensus 296 ------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l 356 (395)
T PRK10054 296 ------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVI 356 (395)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHH
Confidence 234444556778899999999999999999999999999988765 5668999999999998
Q ss_pred hcccC
Q 007405 533 KSVTG 537 (605)
Q Consensus 533 ~~~~~ 537 (605)
.+..|
T Consensus 357 ~~~~g 361 (395)
T PRK10054 357 LTTLP 361 (395)
T ss_pred HHHcC
Confidence 87554
No 17
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=7.1e-22 Score=203.68 Aligned_cols=368 Identities=14% Similarity=0.110 Sum_probs=256.4
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~ 143 (605)
.+..|..++.+.+..|+....-+.... +.+-+.+++|.|..++++.++.|..+..++.|+...+.||+ .||++++..+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~g-LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVG-LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHh-chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHH
Confidence 344566677777777776666554444 55677899999999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
.+++++.++++++ .|+..++++|++.|+..|.+++...++.++..|+++
T Consensus 86 ~lFi~~n~l~alA----------------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~--- 134 (394)
T COG2814 86 ALFIVSNLLSALA----------------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK--- 134 (394)
T ss_pred HHHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc---
Confidence 9999999999998 689999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc-cccccCCCCCchhHHHHHHHH
Q 007405 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP-LYRHRLPGGSPLTRVAQVLVA 302 (605)
Q Consensus 224 ~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~ 302 (605)
|++++++.+.+..++..+|..++.++.+.+|||+.|++.+++.++.++..+...| ..... +...++.+..++
T Consensus 135 ---~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~-~~~~~~~~~~~~--- 207 (394)
T COG2814 135 ---RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISG-SLPGPLRTLLRL--- 207 (394)
T ss_pred ---hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-CCCcchhHHHHH---
Confidence 9999999999999999999999999999999999999999888888777766665 11100 000110000000
Q ss_pred HHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhh
Q 007405 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIP 382 (605)
Q Consensus 303 ~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 382 (605)
. .+.+....+....
T Consensus 208 -----------------l-------------------------------------------------~~p~v~~~l~~t~ 221 (394)
T COG2814 208 -----------------L-------------------------------------------------RRPGVLLGLLATF 221 (394)
T ss_pred -----------------h-------------------------------------------------cCchHHHHHHHHH
Confidence 0 0000111111122
Q ss_pred HHHHHHHHHHhhhhhHHHHHHhhhccCCCCee---------e---CCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 383 ACTIMLNVILTEFLTLSVQQAYTMNTHMGKLK---------L---PVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERY 450 (605)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------i---p~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~ 450 (605)
+.....|..|..... +.++..+++....++. + -.+|..++ +..+.+...+.+.++.++.+.+..
T Consensus 222 l~~~g~F~~ftYi~P-~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~-- 297 (394)
T COG2814 222 LFMTGHFALYTYIRP-FLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG-- 297 (394)
T ss_pred HHHcchhhhHHhHHH-HHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc--
Confidence 222223333322222 2222222222110000 0 00555566 666656666677777777766552
Q ss_pred HHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 007405 451 RRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNS 530 (605)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~ 530 (605)
.+.+..+...++.+++........+....+.+ ++.++.+++++....++|..+|..+++
T Consensus 298 --------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~GA~lGG 356 (394)
T COG2814 298 --------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALGAALGG 356 (394)
T ss_pred --------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555566655444444444444433 356899999999999999999999999
Q ss_pred HhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 531 IIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 580 (605)
Q Consensus 531 ~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 580 (605)
.+.+..| +....++.+++.++++++.+...+.
T Consensus 357 ~v~~~~g------------------~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 357 LVLDALG------------------YAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHhhc------------------hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9887433 4567788888888887776665543
No 18
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=1.5e-22 Score=217.46 Aligned_cols=379 Identities=15% Similarity=0.075 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~ 153 (605)
++...++..++.......++.++ ++++.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 34445555555544445555554 56778999999999999999999999999999997 99999999888777776665
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
...... .. .+.+.+++.|++.|++.+...++..+++.|.+|+++ |+++.++
T Consensus 100 ~~~~~~----~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 150 (417)
T PRK10489 100 ALNAFL----PE-------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAI 150 (417)
T ss_pred HHHHHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHH
Confidence 432110 00 356778889999999988888888999999999888 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccC-CCCCchhHHHHHHHHHHHhhccccC
Q 007405 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL-PGGSPLTRVAQVLVAAFRKRHAAFS 312 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~p 312 (605)
.+...++|..+||.+++++.+..+|++.|++.++..++..++.+. .++.+..+ +..++..+..
T Consensus 151 ~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~--------------- 214 (417)
T PRK10489 151 TMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR-LPALPPPPQPREHPLRSLL--------------- 214 (417)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh-CCCCCCCCcccccchHHHH---------------
Confidence 999999999999999999998889999998877666555444332 22111100 0000000000
Q ss_pred ccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHHH
Q 007405 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVIL 392 (605)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 392 (605)
+. + ......+.+.......+....... +
T Consensus 215 --------------------------------~~--------------~-----~~~~~~~~~~~~~~~~~~~~~~~~-~ 242 (417)
T PRK10489 215 --------------------------------AG--------------F-----RFLLASPVVGGIALLGGLLTMASA-V 242 (417)
T ss_pred --------------------------------HH--------------H-----HHHHcChHHHHHHHHHHHHHHHHh-H
Confidence 00 0 000000111111111011111111 1
Q ss_pred hhhhhHHHHHHhhhccCCCCee------------eCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 007405 393 TEFLTLSVQQAYTMNTHMGKLK------------LPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGY 460 (605)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~------------ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (605)
..+...+..+..+.+....++. +...+..++.+..+.+..+.++.+++++.+...
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~------------- 309 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM------------- 309 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-------------
Confidence 1111122222122222111110 000222233333333555655555555544322
Q ss_pred cccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCC
Q 007405 461 EFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPK 540 (605)
Q Consensus 461 ~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~ 540 (605)
.+.+.+....++.|++.+...+...++..+.+|++.||+++|+++....+|..+|+.+.+.+.+..+
T Consensus 310 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g--- 376 (417)
T PRK10489 310 ----------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT--- 376 (417)
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc---
Confidence 2344455566777888888778888899999999999999999999999999999999998877433
Q ss_pred CCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhceecccCCCCCc
Q 007405 541 KGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGND 592 (605)
Q Consensus 541 ~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~~~~~~~~~ 592 (605)
....++..+++.++..++.+...+++|+++.||.+.+
T Consensus 377 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 377 ---------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred ---------------hhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 2345665666666655666666677777666654443
No 19
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=1e-22 Score=224.10 Aligned_cols=178 Identities=15% Similarity=0.110 Sum_probs=133.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-----MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~ 141 (605)
+++.+....+..+........+....+ .+..+ .+.+..+.+++.+.+.++..++.++.|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 444444455555555554433333233 33332 234556778899999999999999999999997 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 007405 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (605)
+.+++.++.++++++.. ..+ ..+...++++|+++|++.|+..+..+.+++|.+|+++
T Consensus 92 ~~~~~~v~~~~~~~~~~---~~~-------------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~- 148 (502)
T TIGR00887 92 ELIIMIIATVASGLSPG---SSP-------------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW- 148 (502)
T ss_pred HHHHHHHHHHHHHHccC---ccc-------------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh-
Confidence 99999999888776521 000 0236789999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------hhchHHHHHHHHHHHHHHHH
Q 007405 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----------------------EHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~-----------------------~~gw~~~f~~~~~~~~i~~~ 274 (605)
|+++.++++....+|..+++.++.++.. ..+||+.|.+.++..++.++
T Consensus 149 -----Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~ 219 (502)
T TIGR00887 149 -----RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY 219 (502)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888765532 23799999777665554433
No 20
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.92 E-value=6.1e-23 Score=224.45 Aligned_cols=152 Identities=16% Similarity=0.175 Sum_probs=123.4
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCC
Q 007405 101 HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCE 180 (605)
Q Consensus 101 ~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 180 (605)
+.+..+.+++.+.+.++..++++++|+++||+ |||++++++.+++.++.+.++++.........
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--------------- 114 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGP--------------- 114 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccc---------------
Confidence 88899999999999999999999999999997 99999999999998888777653210000000
Q ss_pred CccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-------
Q 007405 181 PAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ------- 253 (605)
Q Consensus 181 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~------- 253 (605)
++......++++|+++|++.|+..+...++++|++|+++ |++.+++...+..+|..+++.++..+.
T Consensus 115 -~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 187 (479)
T PRK10077 115 -DNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASW 187 (479)
T ss_pred -cchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 000345678899999999999999999999999999999 999999999999999999987766543
Q ss_pred -hhhchHHHHHHHHHHHHHHHHH
Q 007405 254 -MEHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 254 -~~~gw~~~f~~~~~~~~i~~~~ 275 (605)
+..|||+.|++.++..++..+.
T Consensus 188 ~~~~gWr~~f~~~~~~~~~~~~~ 210 (479)
T PRK10077 188 LNTDGWRYMFASEAIPALLFLML 210 (479)
T ss_pred cccCChHHHHHHHHHHHHHHHHH
Confidence 3468999999887766655443
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=1.7e-21 Score=207.74 Aligned_cols=178 Identities=13% Similarity=0.126 Sum_probs=151.6
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH
Q 007405 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (605)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~ 140 (605)
+..+|..|+.+.......++.....|.....++. +.+++|+++++.++..+.+.++..++.++.|+++||+ |||+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~ 89 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVI 89 (394)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHH
Confidence 3445667776666666655555565555555554 5678999999999999999999999999999999997 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 007405 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (605)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (605)
++.++..++.+++.++ .+.+.+++.|+++|++.+...+...+++.|++|+++
T Consensus 90 ~~~~~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~ 141 (394)
T PRK10213 90 LFAVLLTLSCLLVSFA----------------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT 141 (394)
T ss_pred HHHHHHHHHHHHHHHH----------------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH
Confidence 9999999988887775 578899999999999999999999999999999988
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 007405 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 274 (605)
|+++.++...+.++|..++|.+++++.+.+||++.|++.+++.++..+
T Consensus 142 ------~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 142 ------VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987765554433
No 22
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.91 E-value=9.7e-22 Score=210.42 Aligned_cols=338 Identities=12% Similarity=0.066 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (605)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~ 154 (605)
.+.+++..++...+.+.++ .+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||++++++.++..++.+.+.
T Consensus 19 ~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 96 (406)
T PRK15402 19 VLFEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAIL 96 (406)
T ss_pred HHHHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHH
Confidence 3333333334444444444 45688999999999999999999999999999999997 999999999998888888877
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHH
Q 007405 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (605)
Q Consensus 155 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~ 234 (605)
.+ .+.+.+++.|++.|++.+...+...+.+.|.+|+++ |.+..++.
T Consensus 97 ~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~ 142 (406)
T PRK15402 97 LA----------------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALM 142 (406)
T ss_pred HH----------------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHH
Confidence 65 467788899999999999888888999999999988 88988988
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCcc
Q 007405 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSS 314 (605)
Q Consensus 235 ~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~ 314 (605)
+....++..++|.+++++.+..+|++.|++.+++.++..+..+...++.++.++++.+..+..+-.
T Consensus 143 ~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 208 (406)
T PRK15402 143 ANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDY-------------- 208 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHH--------------
Confidence 888888999999999999998899999998877766665544333332211110000000000000
Q ss_pred ccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhh-hHHHHHHHHHHh
Q 007405 315 ELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PACTIMLNVILT 393 (605)
Q Consensus 315 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~ 393 (605)
. .-..+ +.+...... .+....+. .+.
T Consensus 209 ---------------------------------~------------------~~~~~-~~~~~~~~~~~~~~~~~~-~~~ 235 (406)
T PRK15402 209 ---------------------------------K------------------LVLKN-RRFVAGALALGLVSLPLL-AWI 235 (406)
T ss_pred ---------------------------------H------------------HHHcC-cHHHHHHHHHHHHHHHHH-HHH
Confidence 0 00000 111111000 00000000 000
Q ss_pred hhhhHHHHHHhhhccCCCCe-ee-----------CCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcc
Q 007405 394 EFLTLSVQQAYTMNTHMGKL-KL-----------PVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYE 461 (605)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~-~i-----------p~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (605)
.....+..+..+.+....++ .. ...+..++.+..+.+.+|.++.+++++.+......
T Consensus 236 ~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~----------- 304 (406)
T PRK15402 236 ALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI----------- 304 (406)
T ss_pred HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 01111111111111110000 00 00333445555555667777666666655543100
Q ss_pred ccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 462 FSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 462 ~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
.. .+.++++...++.++|.+...+..+...... +++.||.+.++.++.+.+|..+|+.+.+.+.+
T Consensus 305 ------~~-~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 305 ------SS-HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred ------cc-ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 01 3456677788889999988888777766544 45899999999999999999999999988765
No 23
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=5e-22 Score=208.19 Aligned_cols=345 Identities=14% Similarity=0.032 Sum_probs=223.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~ 153 (605)
++...++..++.......++.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445566666666555666676665 5899999999999999999999999999999997 99999999998888887777
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
.+.... +. .+.+.++++|++.|++.+...+...++++|.+|+++ |++.+++
T Consensus 82 ~~~~~~----~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 132 (365)
T TIGR00900 82 PFVALL----GG-------------------LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSL 132 (365)
T ss_pred HHHHHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhH
Confidence 665210 00 267889999999999999999999999999999988 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchh-HHHHHHHHHHHhhccccC
Q 007405 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLT-RVAQVLVAAFRKRHAAFS 312 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~p 312 (605)
.+....+|..++|.+++++.+..||++.|++.++..++..+..+..+.+..++++ +++.. +..+
T Consensus 133 ~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------------- 197 (365)
T TIGR00900 133 SQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASE-IQALSNAVLR-------------- 197 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcc-ccccchhHHH--------------
Confidence 9999999999999999999999999999988777665554443332221111000 00000 0000
Q ss_pred ccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhh-hHHHHHHHHH
Q 007405 313 SSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPI-PACTIMLNVI 391 (605)
Q Consensus 313 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~ 391 (605)
+..+. + +.....+.+...... ++....+...
T Consensus 198 -----------------------------~~~~~--------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (365)
T TIGR00900 198 -----------------------------DTREG--------------I-----KFVLKNPLLRTLLLLALLFNLVFAPA 229 (365)
T ss_pred -----------------------------HHHhH--------------H-----HHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 000000111111111 1111111111
Q ss_pred HhhhhhHHHHHHhhhccCCCCe-----e-------eCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 007405 392 LTEFLTLSVQQAYTMNTHMGKL-----K-------LPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHG 459 (605)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~-----~-------ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (605)
.......+..+..+.+....+. . +...+..++.+....+..++++.+++++.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 297 (365)
T TIGR00900 230 IVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT------------ 297 (365)
T ss_pred HHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh------------
Confidence 1111122222111211111010 0 000222233333444555555555555544432
Q ss_pred ccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 460 YEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 460 ~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
+ .+.+.+....++.|++.+...+...++..+.+|++.||.++|+.+....+|..+++.+.+.+.+
T Consensus 298 ---------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 298 ---------P-PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred ---------c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1245566677888999999999999999999999999999999999999999999999988765
No 24
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=1.9e-21 Score=209.99 Aligned_cols=168 Identities=10% Similarity=0.047 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+..++..++..+..+.+...++.+ .+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence 3444444444444444555555544 567999999999999999999999999999999997 99999999999999998
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
++++++ .+.+.+++.|++.|++.|...+...+++.|++|+++ |++.
T Consensus 103 ~~~~~~----------------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~ 148 (434)
T PRK11663 103 ILFGFS----------------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGW 148 (434)
T ss_pred HHHHHH----------------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHH
Confidence 888775 567888889999999999888999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 274 (605)
+++++.+.++|..++|.+++++.+.+||++.|++.++..++..+
T Consensus 149 ~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 149 WAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987766544433
No 25
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.91 E-value=2.8e-21 Score=206.55 Aligned_cols=361 Identities=13% Similarity=0.057 Sum_probs=234.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH-----HHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-----SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-----~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
....+...++..++++...+.++.|++ ++|.+..+ .+++.+++.+...++.++.|+++||+ |||+++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 93 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALG 93 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHH
Confidence 455566677777777777778888875 58888654 37788889999999999999999997 999999999988
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+++... .+.+.+++.|++.|++.+ ..+...+++.|.+|+++
T Consensus 94 ~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~----- 139 (408)
T PRK09874 94 MGIVMVLMGLA----------------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK----- 139 (408)
T ss_pred HHHHHHHHHHH----------------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh-----
Confidence 88887777664 467888899999999865 45777788899999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFR 305 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 305 (605)
|++..++.+...++|..++|.+++.+.+..+|++.|++.+++.++..+......++.....++++. .+. +
T Consensus 140 -~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~ 209 (408)
T PRK09874 140 -SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM-LHM--------R 209 (408)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh-hHH--------H
Confidence 999999999999999999999999999989999999988877665555444433321110000000 000 0
Q ss_pred hhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHH
Q 007405 306 KRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACT 385 (605)
Q Consensus 306 ~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 385 (605)
+. ... .++.+.....+. ..
T Consensus 210 ---------------------------------------~~--~~~-----------------~~~~~~~~~~~~---~~ 228 (408)
T PRK09874 210 ---------------------------------------EV--VTS-----------------LKNPKLVLSLFV---TT 228 (408)
T ss_pred ---------------------------------------HH--HHh-----------------CcCCchHHHHHH---HH
Confidence 00 000 000000000000 00
Q ss_pred HHHHHHHhhhh---hHHHHHHhhhccCC---CCe-----------eeCC-CCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 007405 386 IMLNVILTEFL---TLSVQQAYTMNTHM---GKL-----------KLPV-TCHPRGASQLQRVGIGLAVSILSVIWAGIF 447 (605)
Q Consensus 386 ~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~-----------~ip~-~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~ 447 (605)
..+........ ..+........... .++ ..+. ++..+|.+.++.+..++.+.+++++.....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh
Confidence 00111110010 11111100000000 000 0011 233444444454555655555544443322
Q ss_pred HHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHH
Q 007405 448 ERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASI 527 (605)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~ 527 (605)
.+.+.+....++.|++.+...|...+...+..|++.+|..+++++....+|..+|+.
T Consensus 309 -----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~ 365 (408)
T PRK09874 309 -----------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPL 365 (408)
T ss_pred -----------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHH
Confidence 234445556677899999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007405 528 LNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 579 (605)
Q Consensus 528 l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 579 (605)
+.+.+.+..+ +...|++.+++.+++.+..+...+
T Consensus 366 ~~G~l~~~~g------------------~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 366 MGAAISANYG------------------FRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHhhcc------------------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998766332 356788888888887776655443
No 26
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.90 E-value=2.3e-21 Score=207.87 Aligned_cols=182 Identities=15% Similarity=0.064 Sum_probs=153.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
|.+|+.++..++..+++.+....+.. ...++++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 34566666677766666666554444 45589999999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
++.++.++++++ .+...++++|++.|++.++..+....++.|++|+++
T Consensus 82 ~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---- 129 (412)
T TIGR02332 82 LWGIASTATMFA----------------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF---- 129 (412)
T ss_pred HHHHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH----
Confidence 999999998876 467889999999999999999999899999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------hhchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM------EHGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~------~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
|++.+++++.+..+|..++|.+++++.+ ..|||+.|++.++..++..++..+..++
T Consensus 130 --rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~ 191 (412)
T TIGR02332 130 --RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDD 191 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999998874 3689999999877765554444444443
No 27
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.90 E-value=2e-21 Score=204.68 Aligned_cols=159 Identities=14% Similarity=0.118 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
.......+.+.+++|++.++.+++.+.+.+++.++.++.|+++||+ |||+++..+.+....+.. +....
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~--------- 76 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP--------- 76 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh---------
Confidence 4445566677889999999999999999999999999999999997 999987665555444432 22210
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.++..++++|+++|+|.+.. .......+|.+|+++ |++.+++...+..+|..+++
T Consensus 77 ------------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~ 131 (368)
T TIGR00903 77 ------------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFAL 131 (368)
T ss_pred ------------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 36788999999999999864 455566699999988 99999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 247 TLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 247 ~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
.+++++.+.+|||+.|++.+++.++..++.+...+
T Consensus 132 ~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 132 AAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999877776555554444433
No 28
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.90 E-value=3.9e-21 Score=210.88 Aligned_cols=176 Identities=18% Similarity=0.140 Sum_probs=131.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH-HHH-----HHHHHHHHHHHhhhHHHHHhhhccchHHHHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-SSN-----AVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~-~~~-----~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~ 141 (605)
++.++...+..+++.+.+. +..+..+++.++++.+..+ ..+ +.++..++..++.++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4455666677777777654 4556677888888644322 111 23666788889999999999997 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 007405 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (605)
+++++.++.++++++.++..+.. ..+..++++|+++|++.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~--------------------~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGI--------------------WAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHH--------------------HHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-
Confidence 99999999999988622100000 011248899999999999999999999999999998
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hhhchHHHHHHHHHHHHH
Q 007405 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGI 271 (605)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~--------~~~gw~~~f~~~~~~~~i 271 (605)
|+...++...+..+|..+|+.+...+. ..+|||+.|++.++..++
T Consensus 152 -----Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 -----RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999888888888888876654442 257999999986654443
No 29
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=4.7e-21 Score=204.25 Aligned_cols=357 Identities=11% Similarity=0.041 Sum_probs=227.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 007405 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (605)
Q Consensus 77 ~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~ 156 (605)
+.+..+..++.+.+. .+.+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+++.++.+.++++
T Consensus 17 ~~~~~~~~~~~~~~~-lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 17 IGLNMRPLLTSVGPL-LPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY 94 (393)
T ss_pred HHHHcchhhhccchh-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC
Confidence 333333333444444 4467789999999999999999999999999999999997 99999999999999999999987
Q ss_pred hhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHH
Q 007405 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (605)
Q Consensus 157 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~ 236 (605)
.++..++++|+++|++.+...+....++.|++| ++ |+..++++..
T Consensus 95 ----------------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~ 139 (393)
T PRK09705 95 ----------------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSA 139 (393)
T ss_pred ----------------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHH
Confidence 467788999999999999999999999999987 66 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccc
Q 007405 237 SVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSE 315 (605)
Q Consensus 237 ~~~ig~~i~p~i~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~ 315 (605)
+.++|..+++.+++++.++. +||+.+.+.++..++.++.++...++ + ++.++ ++
T Consensus 140 ~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~---------------------~~ 194 (393)
T PRK09705 140 ALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAR---E-VASSH---------------------KT 194 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC---C-Ccccc---------------------CC
Confidence 99999999999999988875 79988776555444333322221111 0 10000 00
Q ss_pred cccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHHHhhh
Q 007405 316 LIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEF 395 (605)
Q Consensus 316 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 395 (605)
.. .+.+.. .+.+.....+...+....++......
T Consensus 195 ~~-----------------------------------------~~~~~l-----~~~~~~~l~~~~~~~~~~~~~~~~~l 228 (393)
T PRK09705 195 TT-----------------------------------------TPVRVV-----FTPRAWTLGVYFGLINGGYASLIAWL 228 (393)
T ss_pred Cc-----------------------------------------CCcccc-----cCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000 01111111111111222222232323
Q ss_pred hhHHHHHHhhhccCCCCeeeCC------------CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccc
Q 007405 396 LTLSVQQAYTMNTHMGKLKLPV------------TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFS 463 (605)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~ip~------------~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (605)
+..+ .+ .+.+....+..... ++..++.+.++.+.+++.+.++++..+....
T Consensus 229 p~~l-~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~--------------- 291 (393)
T PRK09705 229 PAFY-IE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP--------------- 291 (393)
T ss_pred HHHH-HH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc---------------
Confidence 3322 22 23232222211000 3333444444545666666555554433221
Q ss_pred ccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhc-chhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCC
Q 007405 464 FLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEA-PDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKG 542 (605)
Q Consensus 464 ~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~ 542 (605)
.+...+ ..++.+++.+...|.......+.. |++.+|...|+.+....++..+++.+.+.+.+.+|
T Consensus 292 -------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g----- 357 (393)
T PRK09705 292 -------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG----- 357 (393)
T ss_pred -------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 111111 123456777777777777777776 46889999999999999999999999999887554
Q ss_pred CCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhceec
Q 007405 543 QPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 584 (605)
Q Consensus 543 ~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~ 584 (605)
+ +...|.+.++++++..+..+.+.++++.+
T Consensus 358 --~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 358 --N----------YLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred --C----------chHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 1 34556666666666666666665554433
No 30
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=2.3e-21 Score=212.17 Aligned_cols=388 Identities=15% Similarity=0.118 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
+..+++..++..+....+. ...+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVN-VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 4445555555555544344 445567788999999999999999999999999999999997 99999999999999999
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
++++.+ .+...++++|+++|++.+...+...+++.|.+|+++ |+++
T Consensus 82 ~~~~~~----------------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~ 127 (485)
T TIGR00711 82 LLCGVA----------------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRA 127 (485)
T ss_pred HHHhCc----------------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHH
Confidence 888765 467889999999999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccc
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAA 310 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 310 (605)
+++++....+|..++|.+++++.++.||++.|++.++..++..++.....++.++.+. ++ .+..+....+.......
T Consensus 128 ~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~d~~g~~l~~~~~~~~~ 204 (485)
T TIGR00711 128 MAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS--EN-FDFLGLLLLSVGLGSLL 204 (485)
T ss_pred HHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc--CC-CcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998877766665555444443222111 11 12111111111000000
Q ss_pred cCccccccccccCCCcccccCCcccccCCCcchh--hH----hhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHH
Q 007405 311 FSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCL--DK----AALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPAC 384 (605)
Q Consensus 311 ~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 384 (605)
. ....++++. + ..+...... .. ......+. ....|.. ..+-..+++.....+..++.
T Consensus 205 ~-------~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 267 (485)
T TIGR00711 205 Y-------GLSEGPERG------W-FDSNEILILSITGLVAIIAFVVWEL-TDDNPLV--DLRLFKYRNFTIGCVYMSLL 267 (485)
T ss_pred H-------HHhhCCCCC------C-CCchHHHHHHHHHHHHHHHHHHHHH-cCCCCcc--CHHHHcCCChHHHHHHHHHH
Confidence 0 000000000 0 000000000 00 00000000 0011110 00000111111111111111
Q ss_pred HHHHHHHHhhhhhHHHHHHhhhccCCCCe-eeC----------C-CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 385 TIMLNVILTEFLTLSVQQAYTMNTHMGKL-KLP----------V-TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRR 452 (605)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ip----------~-~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~ 452 (605)
...++.... ....+.+...+.+....++ ..+ . ++..++.+.++.+.+|..+.+++..++....
T Consensus 268 ~~~~~~~~~-~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~---- 342 (485)
T TIGR00711 268 GLGLYGSFY-LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTF---- 342 (485)
T ss_pred HHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccC----
Confidence 111111111 1112222222222111111 000 0 3334455555556677776666666554210
Q ss_pred HHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHh
Q 007405 453 NYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSII 532 (605)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 532 (605)
. ++.+.+.++...++.|+|.+...++......+..|++.+|.++|+.++.+.+|+.+|+.+.+.+
T Consensus 343 --------------~-~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 343 --------------T-PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred --------------C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1134555666678889999999888888888999999999999999999999999999999877
Q ss_pred hc
Q 007405 533 KS 534 (605)
Q Consensus 533 ~~ 534 (605)
.+
T Consensus 408 ~~ 409 (485)
T TIGR00711 408 LT 409 (485)
T ss_pred HH
Confidence 54
No 31
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.90 E-value=3.2e-23 Score=219.21 Aligned_cols=340 Identities=32% Similarity=0.444 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 007405 136 YWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ 215 (605)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~ 215 (605)
+|+++++.+++++|.+++.+++..+.... +.+...++++++++++|.|+.+|++.++++||
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~~-------------------~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq 61 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLPS-------------------GIQLGLFYIGLALIAVGTGGIKPNISPFGADQ 61 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhhh-------------------hHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 58999999999999999888765433211 14567899999999999999999999999999
Q ss_pred CCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccccc-CCCCCchh
Q 007405 216 FDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR-LPGGSPLT 294 (605)
Q Consensus 216 ~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 294 (605)
++++++ ..|.++|+++|++.|+|+.+++.+.+++.+++||.+.|+++++.++++++.++..++.++.. ++.++++.
T Consensus 62 ~~~~~~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~ 138 (372)
T PF00854_consen 62 YDEDDD---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLT 138 (372)
T ss_dssp SSTTTT---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S
T ss_pred hcccch---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccc
Confidence 998742 23999999999999999999999999999999999999999999999999999999988887 77777777
Q ss_pred H-HHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCC-ccccchhhhhh
Q 007405 295 R-VAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPW-KLCTVTQVEEV 372 (605)
Q Consensus 295 ~-~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 372 (605)
+ ...+.....+++....|....+ +.......+ ..................... ..| ..++++++++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 207 (372)
T PF00854_consen 139 NFIKLVLVAAFKKRKLAVPKGSSW-LDWALFQYS------ERSIFGIIVFIRAAVIFFPEI----FFWALFCQVQRVEEL 207 (372)
T ss_dssp --SHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHC------CCCCCCCCCHHHHHHHHCCCH----HHHTTTSSTTTHHHC
T ss_pred hhHHHHHHHHHHHhhcccccchHH-HHHhhhhhh------hhhhhhhhhhccchhhhhhhh----hhcccCCccceeeee
Confidence 7 4555555666655544432222 211100000 000000000111000100000 001 01445667778
Q ss_pred hhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhhhccCCCC-eeeCC-------------------------CCCCCCCCh
Q 007405 373 KTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGK-LKLPV-------------------------TCHPRGASQ 426 (605)
Q Consensus 373 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ip~-------------------------~~~~~~~~~ 426 (605)
|.+.+.++.+.+.+.++..+.+..+....+...+|....+ +.+|+ .++++.++.
T Consensus 208 k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~~~~~ 287 (372)
T PF00854_consen 208 KALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGIQPSP 287 (372)
T ss_dssp CHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT------
T ss_pred eeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcccchh
Confidence 8888888888888888888888888888888888777777 77777 344567889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhH
Q 007405 427 LQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAM 506 (605)
Q Consensus 427 ~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~ 506 (605)
..|+++|+++..+++++...++..|.......+. .+.+|.++.+++.+++|.+..+...+..++.+|++.
T Consensus 288 ~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~~----------~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~ 357 (372)
T PF00854_consen 288 PQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCGK----------VSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRA 357 (372)
T ss_dssp HHHHHHH-HHHHHHHHTTTHHHH---HH----TT------------THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhcccccCC----------CChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhh
Confidence 9999999999999999999898877766555542 455788899999999999999999997777666666
Q ss_pred HHHHHHHHHHHh
Q 007405 507 KSIGSAYAALAG 518 (605)
Q Consensus 507 rg~~~g~~~~~~ 518 (605)
.+..+|++....
T Consensus 358 p~~m~~~~~~~~ 369 (372)
T PF00854_consen 358 PSSMMGIWFALS 369 (372)
T ss_dssp SSSSTHHHHHHH
T ss_pred hHHHHHHHHHHh
Confidence 666666665543
No 32
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=1.8e-20 Score=199.00 Aligned_cols=173 Identities=13% Similarity=0.113 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++.+....++.....+...+.++ .+.+++|.+.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 456666677777777666666554 56788999999999999999999999999999999997 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.++++++ .+.+.+++.|++.|++.+...+....++.|.+|+++ |++
T Consensus 82 ~~l~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~ 127 (382)
T PRK10091 82 NAMFTLS----------------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTA 127 (382)
T ss_pred HHHHHHh----------------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhH
Confidence 9888876 578899999999999999888888889999999888 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
.++++..+..+|..++|.+++++.+..+||+.|++.++..++..+....
T Consensus 128 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 128 AVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999989999999999999999999899999999988766555444333
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.89 E-value=4.2e-21 Score=204.49 Aligned_cols=175 Identities=13% Similarity=0.205 Sum_probs=150.9
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHH
Q 007405 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (605)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~ 142 (605)
.++.+|+.+...++..++..+..+.+.. ..+.+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVAL-VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 3456778777788888888877665544 45567889999999999999999999999999999999997 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 007405 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (605)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (605)
.++..++.+++.++ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 84 ~~~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-- 133 (405)
T TIGR00891 84 IVLFSAGTLACGFA----------------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL-- 133 (405)
T ss_pred HHHHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh--
Confidence 99998888887765 467888999999999999999999999999999988
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHH
Q 007405 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISN 273 (605)
Q Consensus 223 ~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g--w~~~f~~~~~~~~i~~ 273 (605)
|++..++++.+..+|..+++.+++.+.+..+ |++.|++.++..++.+
T Consensus 134 ----~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 134 ----RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887766 9999987655544433
No 34
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.89 E-value=8.1e-22 Score=214.16 Aligned_cols=152 Identities=18% Similarity=0.264 Sum_probs=127.8
Q ss_pred HHHHHHHhCCC--------hhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007405 93 VTFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (605)
Q Consensus 93 ~~yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (605)
...+..+++.+ ..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.+....
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~----- 124 (481)
T TIGR00879 51 LALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA----- 124 (481)
T ss_pred hhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence 33445555555 88999999999999999999999999997 99999999999999988888664210
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 007405 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (605)
Q Consensus 165 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i 244 (605)
.+.+.++++|+++|+|.+...+...++++|.+|+++ |++.+++++.+.++|..+
T Consensus 125 --------------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~ 178 (481)
T TIGR00879 125 --------------------LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILV 178 (481)
T ss_pred --------------------cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHH
Confidence 345688999999999999999999999999999999 999999999999999999
Q ss_pred HHHHH---HHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 245 AFTLV---VYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 245 ~p~i~---~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
++.++ ..+.+..+||+.|++.++..++.++..
T Consensus 179 ~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 179 AYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 99998 666677899999999666555444433
No 35
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.89 E-value=1e-20 Score=199.65 Aligned_cols=172 Identities=11% Similarity=0.043 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHH-HHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI-FTTIYLAGLTGI 153 (605)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~-~~~~~~~~~~~~ 153 (605)
++..++..++.....+.++.|+.+++|.|..+.+++.+.+.+...+..++.|+++||+ ||||.+++ +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3456677777777888899999999999999999999999999999999999999997 99887655 455555565666
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH--H
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF--F 231 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~--~ 231 (605)
..+ .+.+.+++.|+++|.+.+...|...++..|..|++. |... .
T Consensus 82 ~~~----------------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~ 127 (375)
T TIGR00899 82 AWN----------------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFS 127 (375)
T ss_pred Hhc----------------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHH
Confidence 554 456777888888888877778888888888877665 5543 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 232 ~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
++.....++|..++|.+++++.+..||++.|++.++..++..+..+...+
T Consensus 128 ~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 177 (375)
T TIGR00899 128 SVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLP 177 (375)
T ss_pred HHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 67777889999999999999999899999999988776655554444333
No 36
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=9e-21 Score=200.34 Aligned_cols=157 Identities=20% Similarity=0.180 Sum_probs=139.0
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 169 (605)
....+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++...++++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~------------- 79 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA------------- 79 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH-------------
Confidence 3445568889999999999999999999999999999999997 99999999999999888888776
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 007405 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (605)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~ 249 (605)
.+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.....++|..++|.++
T Consensus 80 ---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~ 138 (399)
T TIGR00893 80 ---------------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLV 138 (399)
T ss_pred ---------------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHH
Confidence 467889999999999999999999999999999988 99999999999999999999999
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 250 VYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 250 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
+++.+..+|++.|++.++..++..+..+...+
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 139 GWILIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 99999899999999887776655554444333
No 37
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=8.7e-21 Score=206.01 Aligned_cols=151 Identities=14% Similarity=0.092 Sum_probs=127.2
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccc
Q 007405 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (605)
Q Consensus 93 ~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 172 (605)
...+.+++|++.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~---------------- 104 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS---------------- 104 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh----------------
Confidence 4456789999999999999999999999999999999997 99999999999988888888775
Q ss_pred ccccCCCCCccchhHHHHHH-HHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 173 SQLLGSCEPAKSWQMLYLYT-VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (605)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~ 251 (605)
.+.+.+++ .|++.|++.+...+...+++.+.++ ++ |+++.++.+.+..+|..++|.++++
T Consensus 105 ------------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 105 ------------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred ------------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHH
Confidence 35555554 4688899988766666778889885 56 9999999999999999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHh
Q 007405 252 IQMEHGWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 252 l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
+.+.+|||+.|++.+++.++..+..++.
T Consensus 166 l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 166 LFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888776655544443
No 38
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=3e-20 Score=198.19 Aligned_cols=175 Identities=7% Similarity=0.050 Sum_probs=145.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
.+++|..+...+..++.....+.+...++ .+.+++|+|.++.+++.+.+.++..++.+++|+++||+ |||+++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMG-PIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence 45666677776766666666554545444 46788999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
+..++.+++.++ .+...+++.|+++|++.+...+...+++.|.+|+++
T Consensus 81 ~~~i~~~l~~~~----------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~---- 128 (394)
T PRK03699 81 LMILAVAGLMFS----------------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ---- 128 (394)
T ss_pred HHHHHHHHHHHc----------------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch----
Confidence 988888888775 467788899999999999888889999999999888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHH
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~-~~gw~~~f~~~~~~~~i~~~~ 275 (605)
|+..++..+....+|+.++|.+.+++.. ..|||+.|++.++..++..++
T Consensus 129 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 129 --RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 9999998888888999999999888764 569999999877665554433
No 39
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.89 E-value=4.5e-20 Score=195.39 Aligned_cols=178 Identities=18% Similarity=0.164 Sum_probs=148.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
+++..+...+..++...+.....+. .+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPA-FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 3444555555555555554444444 4456788999999999999999999999999999999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.++.+.+..+ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 81 ~~~~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------ 126 (385)
T TIGR00710 81 ALSSLGLALS----------------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------ 126 (385)
T ss_pred HHHHHHHHHH----------------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------
Confidence 8888887765 467788899999999999999999999999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
|++.+++.+....+|..++|.+++++.+..+|++.|++.++..++..+......
T Consensus 127 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (385)
T TIGR00710 127 LSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFIL 180 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999989999999988776665555444433
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.89 E-value=1.3e-20 Score=195.91 Aligned_cols=345 Identities=18% Similarity=0.197 Sum_probs=237.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 007405 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (605)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~ 152 (605)
......++..+..+.....++.|. +++|.+..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 345566677777766667666665 56799999999999999999999999999999997 9999999999999999888
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHH
Q 007405 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (605)
Q Consensus 153 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~ 232 (605)
+.++ .+.+.++++|++.|++.+...+...++..|.+|+++ |++.++
T Consensus 81 ~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 126 (352)
T cd06174 81 LAFA----------------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALG 126 (352)
T ss_pred HHHh----------------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhh
Confidence 8775 467888999999999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHH-HHhhcccc
Q 007405 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAA-FRKRHAAF 311 (605)
Q Consensus 233 ~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~ 311 (605)
+.+...++|..++|.+++.+.+..+|++.|++.++..++..+...... +......... ...-.
T Consensus 127 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~--- 190 (352)
T cd06174 127 LFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------RLLLLLALAFFLLSFG--- 190 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHhH---
Confidence 999999999999999999999988999999988877666655544332 1111000000 00000
Q ss_pred CccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHH
Q 007405 312 SSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVI 391 (605)
Q Consensus 312 p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 391 (605)
.. .+. .+... .. ... . ...+... .... . ........
T Consensus 191 -~~----~~~--------------------~~~~~--~~-~~~---------~---~~~~~~~--~~~~-~-~~~~~~~i 226 (352)
T cd06174 191 -YY----GLL--------------------TYLPL--YL-QEV---------L---GLSAAEA--GLLL-S-LFGLGGIL 226 (352)
T ss_pred -HH----HHH--------------------HHHHH--HH-HHh---------c---CCCHHHH--HHHH-H-HHHHHHHH
Confidence 00 000 00000 00 000 0 0000000 0000 0 00000000
Q ss_pred HhhhhhHHHHHHhhhccCCCCeeeCCCCCCCCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCc
Q 007405 392 LTEFLTLSVQQAYTMNTHMGKLKLPVTCHPRGASQLQ-RVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPD 470 (605)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~-~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (605)
. .... .+..++.+.++ .+..+..+..++.+.....
T Consensus 227 -~---~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------------- 262 (352)
T cd06174 227 -G---ALLG-----------------GLLSDRLGRRRLLLLIGLLLAALGLLLLALA----------------------- 262 (352)
T ss_pred -H---HHHH-----------------HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-----------------------
Confidence 0 0000 00111222223 4666777777776666543
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 007405 471 LSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQN 550 (605)
Q Consensus 471 ~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~ 550 (605)
.+.+......++.+++.+...+....++.+..|++.|++++|+.+....+|..+++.+.+.+.+.. +|
T Consensus 263 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~--------~~---- 330 (352)
T cd06174 263 PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG--------GY---- 330 (352)
T ss_pred ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------Cc----
Confidence 245667778888999999999999999999999999999999999999999999999999876522 23
Q ss_pred CcCcchhHHHHHHHHHHHHHHHHHH
Q 007405 551 INTGRFDYLYWLLAVLSVINFCAFL 575 (605)
Q Consensus 551 ~~~~~~~~~f~~~a~l~~v~~~~~~ 575 (605)
...|++.+++.++..++++
T Consensus 331 ------~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 331 ------GGVFLILAALALLAALLLL 349 (352)
T ss_pred ------chHHHHHHHHHHHHHHHhe
Confidence 4567777777777766543
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=6e-20 Score=196.96 Aligned_cols=152 Identities=15% Similarity=0.101 Sum_probs=133.5
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccccc
Q 007405 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQ 174 (605)
Q Consensus 95 yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 174 (605)
.+.+++|.+..++++.++++.++..++.+++|+++||+ |||++++.+.+++.++.+.+.++
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------ 101 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------ 101 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc------------------
Confidence 36788999999999999999999999999999999997 99999999999999998888875
Q ss_pred ccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 175 LLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
.+...++++|+++|++.+...+...+++.|.+|+++ |.+.+++++...++|..+||.+++++.+
T Consensus 102 ----------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 102 ----------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999988766777788899999988 9999999999999999999999999998
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 255 EHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 255 ~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
..||++.|++.++..+++.+..+...+
T Consensus 166 ~~gw~~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 166 FVHWKVLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 889999999988776666554333333
No 42
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.89 E-value=1.1e-21 Score=204.65 Aligned_cols=167 Identities=20% Similarity=0.262 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (605)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~ 154 (605)
++..++..+....+...++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++...+.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 3455666666666666666688999999999999999999999999999999999997 999999999999999855555
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHH
Q 007405 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (605)
Q Consensus 155 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~ 234 (605)
++ .+.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.
T Consensus 81 ~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~ 126 (352)
T PF07690_consen 81 FA----------------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGIL 126 (352)
T ss_dssp HH----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHH
T ss_pred hh----------------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccc
Confidence 53 244589999999999999999999999999999988 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 235 ~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
+...++|..++|.+++++.+..+|++.|++.++..++..++.
T Consensus 127 ~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 127 SAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhH
Confidence 999999999999999999988899999999988887776643
No 43
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.88 E-value=1.4e-20 Score=198.09 Aligned_cols=157 Identities=14% Similarity=0.055 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007405 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (605)
Q Consensus 85 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (605)
.|.+ ..+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.++++
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~-------- 88 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA-------- 88 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH--------
Confidence 4433 4467788899999999999999999999999999999999997 99999999999999999888876
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 007405 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (605)
Q Consensus 165 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i 244 (605)
.+.+.++++|++.|++.+...+.......+.+| ++ |++..+++..+.++|..+
T Consensus 89 --------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~ 141 (377)
T TIGR00890 89 --------------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFI 141 (377)
T ss_pred --------------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhH
Confidence 578889999999999999888788888888886 45 899999999999999888
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 245 ~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
++.+.+.+.+..|||+.|++.++..++..+..+.
T Consensus 142 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 142 LSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777789999999888776665554443
No 44
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.88 E-value=9.5e-20 Score=194.16 Aligned_cols=162 Identities=14% Similarity=0.062 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++.++...++..++...+...++. +.+++|.+..+.+++.+.+.+...++.+++|+++||+ |||++++++.+++.++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 455666667766654444444443 4678999999999999999999999999999999997 99999999999998887
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+.+.++ .+. ++.|+++|++.+...|...+++.|.+|+++ |+++
T Consensus 83 ~~~~~~----------------------------~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a 125 (393)
T PRK11195 83 LLMLFG----------------------------IHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKA 125 (393)
T ss_pred HHHHHH----------------------------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 776654 232 678899999999999999999999999988 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (605)
.++.....++|..+||.++|++.+. .|+..+++.+...+++
T Consensus 126 ~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 126 NGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999885 4777776665544433
No 45
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.88 E-value=3.6e-20 Score=201.18 Aligned_cols=157 Identities=11% Similarity=0.061 Sum_probs=126.1
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 007405 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (605)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 170 (605)
...+|+.++ |++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+.++++.. ..
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~-----~~----- 117 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW-----AT----- 117 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc-----cc-----
Confidence 445577777 99999999999999999999999999999997 9999999999998888887776411 00
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHH-HHHHHH
Q 007405 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI-VAFTLV 249 (605)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~-i~p~i~ 249 (605)
.+...+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|+. .+|+++
T Consensus 118 --------------~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~ 177 (452)
T PRK11273 118 --------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFL 177 (452)
T ss_pred --------------ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHH
Confidence 256678888999999999988888888999999998 99999999999998875 455544
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q 007405 250 VYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 250 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
..+....+|++.|++.+++.++..++.++.
T Consensus 178 ~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 178 LGMAWFNDWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444589999998877665554444333
No 46
>PRK09952 shikimate transporter; Provisional
Probab=99.88 E-value=9.6e-20 Score=196.95 Aligned_cols=178 Identities=16% Similarity=0.151 Sum_probs=130.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCChhHHHHHH-----HHHHHHHHHhhhHHHHHhhhccchHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--HKSFADSSNAV-----NNFLGISQASSVLGGFLADAYLGRYW 137 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~--~~s~~~~~~~~-----~~~~~~~~~~~~~~G~laD~~~GR~~ 137 (605)
..+++.++..++..+++...+..+....+.++.+++ +.++.+ ++.. ++..++..++.++.|+++||+ |||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~ 95 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHH
Confidence 344566666777777777776554444455666665 677663 4332 223344567778889999997 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 007405 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (605)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (605)
++.++.+++.++.++++++.+..... -.....+++.|+++|++.|+..+....++.|.+|
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 155 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIG--------------------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP 155 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHH--------------------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC
Confidence 99999999999999988862210000 0112358889999999999999999999999999
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hhhchHHHHHHHHHHHH
Q 007405 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMG 270 (605)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~--------~~~gw~~~f~~~~~~~~ 270 (605)
+++ |+...+....+..+|..++..+..++. ..+|||+.|++.++..+
T Consensus 156 ~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 156 KNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred CCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 998 999988888888888888877766654 24799999998766543
No 47
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=8.4e-20 Score=194.65 Aligned_cols=176 Identities=13% Similarity=0.074 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHhhhHHHHHhhhccchHHHHH-HHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIA-IFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~GR~~~~~-~~~~~~~ 147 (605)
..+..++..++..++...+.+.++.|+.+++|++.++.+++.+.+.+ +..++++++|+ +||+ ||||.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 46667777888888888888999999999999999999998876655 55555666666 9997 9988755 4455544
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++..+.+++ .+.+.+++.+.+.+...+...|...++..|..++++ |
T Consensus 94 ~~~~~~~~~----------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 139 (393)
T PRK15011 94 LACTLFAWN----------------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------R 139 (393)
T ss_pred HHHHHHHHh----------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------c
Confidence 555555554 345555544444443344667778888888776655 4
Q ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 228 D--RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 228 ~--~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
. ...++.+.+.++|..++|.+++++.++.|||+.|++.++..++..+......+
T Consensus 140 ~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 195 (393)
T PRK15011 140 EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLP 195 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3 34467888899999999999999999899999999887766555554444333
No 48
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=5.4e-21 Score=208.53 Aligned_cols=157 Identities=15% Similarity=0.066 Sum_probs=129.4
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccc
Q 007405 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (605)
Q Consensus 92 l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 171 (605)
..+.+.+++|++..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..++.+..+.....
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------ 117 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------ 117 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc------------
Confidence 35567889999999999999999999999999999999997 99999999888877777666542100
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (605)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~ 251 (605)
...+...+++.|+++|++.+...+...++++|++|+++ |++.++++..+.++|..+++.+..+
T Consensus 118 -----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 118 -----------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred -----------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHH
Confidence 00468889999999999999999999999999999999 9999999999999999999998887
Q ss_pred HHhhh---chHHHHHHHHHHHHHHHHHHHH
Q 007405 252 IQMEH---GWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 252 l~~~~---gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
+.... +|+..|.+.++..++..++.+.
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 76643 5888888766665544443333
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.88 E-value=8e-20 Score=197.31 Aligned_cols=177 Identities=16% Similarity=0.215 Sum_probs=130.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CChhHHHHHHHHHHH---HHHHhhhHHHHHhhhccchHHHHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNFLG---ISQASSVLGGFLADAYLGRYWTIAI 141 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~---~s~~~~~~~~~~~~~---~~~~~~~~~G~laD~~~GR~~~~~~ 141 (605)
++.+....+..+++.+.+.. ...+.+++.++++ .+..+.+.....+.. +..++.+++|+++||+ |||+++.+
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~ 98 (432)
T PRK10406 21 IWAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHH
Confidence 33444444556667777544 5667778888885 455544444444444 4448899999999997 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 007405 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (605)
+.+++.++.++++++....... -.....+++.|+++|++.|+..+...++++|.+|+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~- 157 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIG--------------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR- 157 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHH--------------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc-
Confidence 9999999999988752110000 0134578899999999999999999999999999998
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hhhchHHHHHHHHHHHHHH
Q 007405 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGIS 272 (605)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~--------~~~gw~~~f~~~~~~~~i~ 272 (605)
|+...++.+.+.+.|..+++.+...+. ..+|||+.|++.++..++.
T Consensus 158 -----rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 158 -----KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 999999988888888888887655543 2579999999876655443
No 50
>TIGR00898 2A0119 cation transport protein.
Probab=99.88 E-value=5.7e-21 Score=210.42 Aligned_cols=145 Identities=12% Similarity=0.095 Sum_probs=128.0
Q ss_pred HHHHHHhCCC---hhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 007405 94 TFMFYVMHKS---FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (605)
Q Consensus 94 ~yl~~~~~~s---~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 170 (605)
..+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||++++++.++..++.++++++
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~-------------- 177 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS-------------- 177 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3456789998 88999999999999999999999999997 99999999999999888888775
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 007405 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (605)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~ 250 (605)
.+.+.++++|++.|++.++..+...+++.|.+|+++ |+...+++..+..+|..++|.++.
T Consensus 178 --------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 237 (505)
T TIGR00898 178 --------------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAY 237 (505)
T ss_pred --------------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578889999999999999999999999999999999 999999998899999999998876
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 251 YIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 251 ~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
.+.+ ||+.|++.++..++..+..
T Consensus 238 ~~~~---wr~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 238 FIPD---WRWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred HhhH---HHHHHHHHHHHHHHHHHHH
Confidence 6654 9999998887766555544
No 51
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=6.6e-20 Score=197.37 Aligned_cols=167 Identities=16% Similarity=0.187 Sum_probs=144.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
.+|+.+....+..+...+..+.. .++..++.+++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 44555666666666666665443 4556677899999999999999999999999999999999997 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+.+.++ .+.+.++++|++.|++.+...+....++.|.+|+++
T Consensus 93 ~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~----- 139 (426)
T PRK12307 93 YSVGTGLSGLA----------------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL----- 139 (426)
T ss_pred HHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH-----
Confidence 99998888876 567889999999999999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~ 268 (605)
|++..+++..+..+|..+++.+.+++.+..||++.|++..+.
T Consensus 140 -r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 140 -KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred -hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 999999999999999999999999998889999999875443
No 52
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=9.1e-20 Score=193.52 Aligned_cols=153 Identities=16% Similarity=0.179 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~ 147 (605)
.+.++.+++..++..++...+.+.++.|+. ++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 345788888888988888778888888876 6899999999999999999999999999999997 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++...++++ .+.+.++++|++.|++.+...+...+.+.|..++++ |
T Consensus 83 ~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~ 128 (381)
T PRK03633 83 AGCAGLGLM----------------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------R 128 (381)
T ss_pred HHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------H
Confidence 988887775 467888999999999999988888888888888887 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~ 256 (605)
++.+++++...++|..+||.+++++.+..
T Consensus 129 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 129 GRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999987654
No 53
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.2e-20 Score=192.00 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLS---VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~---~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
+.++...++.+.+||.+. ....+++.++.++|.+|.+.+.+.+.+.+.++-.+.|.++||. +.|+.+-+++++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 567777888888888764 4467789999999999999999999999999999999999997 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
..++++++ .+...+.+..++.|+.+|.-.|.....++.+|++++ ||
T Consensus 107 ~nil~Gfs----------------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG 152 (448)
T COG2271 107 VNILFGFS----------------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RG 152 (448)
T ss_pred HHHHHhhh----------------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cC
Confidence 99999987 567788888899999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q 007405 229 RFFNFFYLSVTVGAIVAFTLV--VYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~--~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
+..++++.+.|+|+++.|.+. +++..+.+||..|+++++++++..++.+..
T Consensus 153 ~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 153 TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 899988899999999998876555554443
No 54
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=1.3e-19 Score=193.19 Aligned_cols=175 Identities=14% Similarity=0.108 Sum_probs=144.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
+.+|..+......++..+..+...+. .+++.+++|.|+.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~-~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPA-IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 35666666666666666665444444 4456789999999999999999999999999999999997 999999999998
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+.+..+ .+...+++.|++.|++.+...+....+..|.++.++
T Consensus 83 ~~~~~~~~~~~----------------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----- 129 (394)
T PRK11652 83 FILGTLVALFA----------------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ----- 129 (394)
T ss_pred HHHHHHHHHHH----------------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH-----
Confidence 88888877765 467788999999999998887888888899988877
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
|++..+++..+..++..++|.+++++.+..||++.|++.++..++..+..
T Consensus 130 -~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 130 -LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999988899999998776655444433
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.87 E-value=6.8e-20 Score=201.33 Aligned_cols=168 Identities=14% Similarity=0.212 Sum_probs=145.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
+.+|+.+..+.+..++..+..+.+ ..+..++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLI-TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 456666666666666666665444 4455677889999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
+..++.+.+.++ .+.+.++++|++.|++.++..+...+++.|.+|+++
T Consensus 94 ~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 141 (496)
T PRK03893 94 LFSVGTLACGFA----------------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL---- 141 (496)
T ss_pred HHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH----
Confidence 999988888875 467889999999999999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~ 268 (605)
|++.+++++...++|..++|.+.+++.+..+|++.|++.++.
T Consensus 142 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 142 --RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999875443
No 56
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=4.6e-21 Score=203.44 Aligned_cols=383 Identities=14% Similarity=0.074 Sum_probs=243.5
Q ss_pred HHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhH
Q 007405 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (605)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 187 (605)
+.+++++.++++++..++|+++||+ |||..++++.++..++.++..++... ...
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------------~~~ 116 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------------PSF 116 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------------hhH
Confidence 4677889999999999999999997 99999999999988888887776321 467
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH-HH-HhhhchHHHHHHH
Q 007405 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV-YI-QMEHGWGSAFGAL 265 (605)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~-~l-~~~~gw~~~f~~~ 265 (605)
.+++++|++.|+..|......+.++.|..|.+- ||..-.+..++..+|-.++..++. .+ .....|++.+.+.
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~ 190 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFP 190 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHH
Confidence 899999999999999999999999999999999 999999999999999999866552 33 3445699888888
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccccccccc-cCCCcccccCCcccccCCCcchh
Q 007405 266 AIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYE-VPGKHSAIKGSGKIAHTDDFRCL 344 (605)
Q Consensus 266 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~-~~~~~~~~~~~~~l~~~~~~~~~ 344 (605)
.+.+++.++...+ +||||+| |+. +++.++|++..+.++..++.+..
T Consensus 191 ~i~~~~~l~~l~~--------------------------------~PESPk~-Ll~~k~~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 191 LIPALLQLALLPF--------------------------------LPESPKY-LLIKKGDEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHHHHHHHHhc--------------------------------CCCCcch-HHHHcCCHHHHHHHHHHHhCCCcchhH
Confidence 8777666665544 7999999 776 78888888887777655432221
Q ss_pred hHh---hhhhccccC-CC-CCCccccchhhhhhhhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhhhccC--------CC
Q 007405 345 DKA---ALELKEDVI-NP-SPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTH--------MG 411 (605)
Q Consensus 345 ~~~---~~~~~~~~~-~~-~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 411 (605)
..+ ......... .. ..+++++.. ..++.+...+.+.+.+++-.......+++......++... .+
T Consensus 238 ~e~~~~e~~~~~~~~~~~~sl~~~~~~~--~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g 315 (485)
T KOG0569|consen 238 IEEMLREIEEEELEKKKQISLRQLLKNP--TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIG 315 (485)
T ss_pred HHHHHHHHHHhccccccCCcHHHHhcCc--chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 111 111111100 11 111111111 1111111111111122211111111111111111111111 01
Q ss_pred CeeeCC----CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHH-HHHHHHHHH-
Q 007405 412 KLKLPV----TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWL-LIQYCLIGI- 485 (605)
Q Consensus 412 ~~~ip~----~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l-v~~~~l~g~- 485 (605)
.+.++. ....++.+++..+.+++.++.++.+.+........... + ...+. +...++..+
T Consensus 316 ~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~-------------~--~~~y~~i~~~~~~~~~ 380 (485)
T KOG0569|consen 316 IVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG-------------S--WLSYLCIAAIFLFIIS 380 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------h--HHHHHHHHHHHHHHHh
Confidence 111111 12223333334455566655555555554433211100 0 11122 222222222
Q ss_pred HhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHH
Q 007405 486 AEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAV 565 (605)
Q Consensus 486 g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~ 565 (605)
-.....|..+-+..|.+|++.|+.++++....+++.+++-....+.+.+..| .++|+.+++
T Consensus 381 f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-------------------~~~filF~i 441 (485)
T KOG0569|consen 381 FAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-------------------PYVFILFVI 441 (485)
T ss_pred hhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------------chhhHHHHH
Confidence 2334467778888899999999999999999999999999999999988766 257888889
Q ss_pred HHHHHHHHHHHHHhhceecccCCCCC
Q 007405 566 LSVINFCAFLYSAYRYKYRSEQKHGN 591 (605)
Q Consensus 566 l~~v~~~~~~~~~~~~~~~~~~~~~~ 591 (605)
.+++..+..+...+++|+|+.+|+.+
T Consensus 442 ~~~~~~i~~~~~lPETkgr~~~eI~~ 467 (485)
T KOG0569|consen 442 PLAIFLIYLYRYLPETKGRTPYEIIE 467 (485)
T ss_pred HHHHHHHHHHHhCcccCCCCHHHHHH
Confidence 99999999999999999998765433
No 57
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.87 E-value=6.2e-20 Score=200.11 Aligned_cols=148 Identities=15% Similarity=0.149 Sum_probs=130.0
Q ss_pred HhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCC
Q 007405 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (605)
Q Consensus 99 ~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 178 (605)
+++++..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..++.+++.++..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999997 9999999999988888777654421
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-c
Q 007405 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-G 257 (605)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~-g 257 (605)
.+...+++.|+++|++.+...+....+++|++|+++ |+++.++.+.+.++|..++|.+++++.+.. |
T Consensus 129 ------~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g 196 (465)
T TIGR00894 129 ------GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGG 196 (465)
T ss_pred ------cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 245678899999999999999999999999999999 999999999999999999999999999884 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 007405 258 WGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 258 w~~~f~~~~~~~~i~~~~~~~~ 279 (605)
|++.|++.++..++..++++..
T Consensus 197 w~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 197 WPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred CCeehhhhhHHHHHHHHHHHHH
Confidence 9999999887766555544443
No 58
>TIGR00895 2A0115 benzoate transport.
Probab=99.87 E-value=1.4e-19 Score=191.95 Aligned_cols=181 Identities=16% Similarity=0.110 Sum_probs=147.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
+.+|+.+...++..+......+ ......+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHH
Confidence 3445555555555555544443 344456677788999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
+..++.+++.++ .+.+.+++.+++.|++.+...+...++++|.+|+++
T Consensus 91 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---- 138 (398)
T TIGR00895 91 LFSVFTLLCALA----------------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF---- 138 (398)
T ss_pred HHHHHHHHHHHc----------------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh----
Confidence 888888777764 466788899999999999999999999999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
|++.+++...+..+|..++|.+++++.+..||++.|++.++...+..++.....+
T Consensus 139 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T TIGR00895 139 --RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLP 193 (398)
T ss_pred --hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999998876555444444433333
No 59
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=4.1e-19 Score=193.99 Aligned_cols=176 Identities=15% Similarity=0.085 Sum_probs=135.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
++++.+.......++.....+.+.. +.+++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~ 110 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAP-LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLML 110 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 3455555555555555555554443 44577889999999999999999999999999999999997 999999999988
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.++++++ .+...++++|++.|++.+... ....+++|++|+++
T Consensus 111 ~~~~~~~~~~~----------------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~----- 156 (476)
T PLN00028 111 TAPAVFCMSLV----------------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI----- 156 (476)
T ss_pred HHHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh-----
Confidence 88888777765 456778889999999988654 34567899999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH----h-----hhchHHHHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQ----M-----EHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~----~-----~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
|++++++.+...++|..+++.+.+.+. + ..|||+.|++.+++.++..+..++
T Consensus 157 -rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 157 -VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred -eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999988777778777766655442 2 248999999988776655544443
No 60
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=8.5e-19 Score=187.50 Aligned_cols=172 Identities=13% Similarity=0.067 Sum_probs=140.5
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~ 143 (605)
+-+-||.+....+..++..++.+....+++.|+ +++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~ 85 (402)
T TIGR00897 8 KIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGL 85 (402)
T ss_pred HcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHH
Confidence 345566777888888888888777777888888 67899999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
++..++.+++..... .. .+...+++.|++.|+|.+...+...+.+.+.+|+++
T Consensus 86 ~~~~~~~~~~~~~~~-----~~-------------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~--- 138 (402)
T TIGR00897 86 LLWCVGHAAFIVFGL-----GH-------------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN--- 138 (402)
T ss_pred HHHHHHHHHHHHHhc-----cC-------------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH---
Confidence 998888765532110 00 256677888999999988877777888899999988
Q ss_pred hhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhchHHHHHHHHH
Q 007405 224 KTHLDRFFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAI 267 (605)
Q Consensus 224 ~~~r~~~~~~~~~~~~ig~-~i~p~i~~~l~~~~gw~~~f~~~~~ 267 (605)
|+++.++++.+.++|. .++|.+++++.+..||+..++....
T Consensus 139 ---~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 139 ---LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999999996 5899999999888887655554433
No 61
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.86 E-value=7.7e-19 Score=186.50 Aligned_cols=350 Identities=9% Similarity=-0.007 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH-HHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI-YLAGL 150 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~-~~~~~ 150 (605)
+.+.+..++...++....++++.|+ +++|+|..+.+++.+.+.+...+++++.|+++||+ ||+........+ ..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 3344555666666555667788888 56899999999999999999999999999999997 985433222111 11111
Q ss_pred H-HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 151 T-GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 151 ~-~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
+ .+..+ .+.+.+++.|++++.+.+...|...++..|. .++ |++
T Consensus 85 ~~~~~~~----------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~ 128 (382)
T TIGR00902 85 AAFSAGA----------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGL 128 (382)
T ss_pred HHHHHhh----------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCC
Confidence 1 11122 4678888899999999888888888876543 344 788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhcc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 309 (605)
.++......++|..++|.+++++.+.+||+..|++..+..++.++. ....++.++.++ ++.
T Consensus 129 ~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~----------------- 189 (382)
T TIGR00902 129 DYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIG-FLIKPTIPPKDA-IPE----------------- 189 (382)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHcCCCCCCCcc-ccc-----------------
Confidence 8899999999999999999999999999999988765543332222 222111000000 000
Q ss_pred ccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHH
Q 007405 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (605)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 389 (605)
++ .....+.. +-.++ |+++..+ +...+.+
T Consensus 190 ----------------~~---------~~~~~~~~----------------------~~l~~-~~~~~~l---~~~~l~~ 218 (382)
T TIGR00902 190 ----------------DE---------SQGDSAFI----------------------ALLKN-PMNLRFL---AAVCLIQ 218 (382)
T ss_pred ----------------cc---------cccchhHH----------------------HHHcC-hHHHHHH---HHHHHHH
Confidence 00 00000000 00011 1121111 1111122
Q ss_pred HHHhhhhh---HHHHHHhhhccCCCCee--------eC----CCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 390 VILTEFLT---LSVQQAYTMNTHMGKLK--------LP----VTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNY 454 (605)
Q Consensus 390 ~~~~~~~~---~~~~~~~~~~~~~~~~~--------ip----~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~ 454 (605)
.......+ .+.+ ..+.+....++. ++ .++..+|.+.++.+.+|.++.++..+..+..
T Consensus 219 ~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~------- 290 (382)
T TIGR00902 219 GAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI------- 290 (382)
T ss_pred HHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------
Confidence 22222222 2222 122222211110 11 1455677788887888888888887766654
Q ss_pred hhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHH-HHhhHHHHHHHHHHHHhh
Q 007405 455 AISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA-LAGGLGCFAASILNSIIK 533 (605)
Q Consensus 455 ~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~l~~~l~~~i~ 533 (605)
.+.+.++...++.+++.++..+....++.+. |++.|+.++++++ ...++|..+++.+.|.+.
T Consensus 291 ----------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 291 ----------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIY 353 (382)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666677899999999999999999988 9999999999987 577899999999999887
Q ss_pred cccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHH
Q 007405 534 SVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCA 573 (605)
Q Consensus 534 ~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~ 573 (605)
+..+ ...|++.+++.++++++
T Consensus 354 ~~~g-------------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 354 PTLG-------------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred Hhcc-------------------HHHHHHHHHHHHHHHHH
Confidence 7433 24677777777766444
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.86 E-value=2.1e-19 Score=194.45 Aligned_cols=159 Identities=11% Similarity=0.052 Sum_probs=129.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 007405 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (605)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 170 (605)
...+++++ +|.++++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+...... .
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~-----~----- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA-----T----- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc-----c-----
Confidence 34456665 599999999999999999999999999999997 99999999988888887776553110 0
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 007405 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (605)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~ 250 (605)
.+...+++.|++.|++.+...+.....+.|.+|+++ |++++++++...++|+.++|.+.+
T Consensus 116 --------------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~ 175 (438)
T TIGR00712 116 --------------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVL 175 (438)
T ss_pred --------------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHH
Confidence 245667788999999999988888999999999999 999999999999999999988877
Q ss_pred HHH-hhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 251 YIQ-MEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 251 ~l~-~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
.+. +..+||+.|++.++..++..+..++..+
T Consensus 176 ~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 176 LGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 644 4568999999988776665544444433
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.86 E-value=1.4e-18 Score=185.04 Aligned_cols=171 Identities=16% Similarity=0.100 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~ 153 (605)
..+..+....++....+. .+.+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||++++++.+++.++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~-lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVG-LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHHHHHhhh-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHH
Confidence 344444445554444444 4456678999999999999999999999999999999997 99999999999998888887
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
..+ .+...++++|+++|++.+...+...+++.|.+|+++ |++.+++
T Consensus 86 ~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~ 131 (392)
T PRK10473 86 SLA----------------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSL 131 (392)
T ss_pred HHh----------------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 765 456778889999999999988899999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
.+...++|..++|.+++++.+..||++.|++.++..++..++.+...
T Consensus 132 ~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 132 LNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFIL 178 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999988888999999988776655555444433
No 64
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=1.1e-18 Score=186.32 Aligned_cols=162 Identities=16% Similarity=0.235 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHH--HHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 81 ERMAYFGLSVNMVTF--MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (605)
Q Consensus 81 ~~~~~~~~~~~l~~y--l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~ 158 (605)
...+++....++|.+ +.+++|.+..+.++..+++.++..++.++.|+++||+ |||+++.++.++..++.+.+.++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~-- 91 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV-- 91 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh--
Confidence 333444444444443 6789999999999999999999999999999999997 99999999998888888777765
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHH
Q 007405 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (605)
Q Consensus 159 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~ 238 (605)
.+.+.+++.|+++|++.+...+...+++.|.+++++ +.+.++..+...
T Consensus 92 --------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 139 (401)
T PRK11043 92 --------------------------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLV 139 (401)
T ss_pred --------------------------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHH
Confidence 467788899999999988877888889999999887 888888888888
Q ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 007405 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 239 ~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (605)
++|..++|.+++++.+..||++.|++.++..++..+..+
T Consensus 140 ~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 140 ALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988776665554443
No 65
>PRK15075 citrate-proton symporter; Provisional
Probab=99.85 E-value=7.5e-19 Score=189.83 Aligned_cols=176 Identities=15% Similarity=0.085 Sum_probs=130.1
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHH-HHHHHHH-----HHHhhhHHHHHhhhccchHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNA-VNNFLGI-----SQASSVLGGFLADAYLGRYW 137 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~-~~~~~~~-----~~~~~~~~G~laD~~~GR~~ 137 (605)
+..+|+.....++..+++.+....+ ..+.+++.++++.+..+.+.. .+..... ..++.++.|+++||+ |||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~ 87 (434)
T PRK15075 10 RESKARAILRVTSGNFLEMFDFFLF-GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRK 87 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHH
Confidence 3345556677777777777776544 445668888999887765433 3322222 235778899999997 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 007405 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (605)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (605)
+++++.+++.++.++++++.+...+. ......++++|+++|++.+...++...+++|++|
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 147 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIG--------------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT 147 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHH--------------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC
Confidence 99999999999999988762100000 0001256889999999999999999999999999
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hhhchHHHHHHHHH
Q 007405 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAI 267 (605)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~--------~~~gw~~~f~~~~~ 267 (605)
+++ |++..++.....++|..+++.+++.+. +.+|||+.|++..+
T Consensus 148 ~~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 148 PGR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred ccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 999 999999988888888888887777652 46799999987543
No 66
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.85 E-value=3.2e-19 Score=191.83 Aligned_cols=378 Identities=10% Similarity=-0.019 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
..|......++..++++.+.++++.|+++++|++..+.+.+.+.+.++..+++++.|+++||+ |||++++++..+..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVL 89 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 466667777888888778899999999999999999999999999999999999999999997 9999998876665554
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
..........+.... ......+++.++.|.+.....+....+.. .++ ++ ++.
T Consensus 90 ~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~------~g~ 141 (420)
T PRK09528 90 FGPFFIYVFAPLLQY--------------------NILLGAIVGGIYLGFGFLAGAGAIEAYIE-RVS-RR------SGF 141 (420)
T ss_pred HHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHhhhhhccchhhhhhHHH-HHH-hh------ccc
Confidence 432221100000000 01111122233333333333333333221 111 12 566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhcc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 309 (605)
.++......++|..++|.+++++.+ .+|++.|++.++..++.+++.+..+++.++++...+
T Consensus 142 ~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 202 (420)
T PRK09528 142 EYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVAN------------------ 202 (420)
T ss_pred cchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhcc------------------
Confidence 6777777889999999999999876 489999988777666555544433322111000000
Q ss_pred ccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHH
Q 007405 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (605)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 389 (605)
++ .+ ..+.....+.. . ..+ .+.+.......+.....+
T Consensus 203 ----------------~~-~~------~~~~~~~~~~~--~-----------------~l~-~~~~~~l~l~~~~~~~~~ 239 (420)
T PRK09528 203 ----------------AL-GA------NASAVSLKDAL--A-----------------LLK-LPKFWFLVLYVIGVACFY 239 (420)
T ss_pred ----------------ch-hc------ccccccHHHHH--H-----------------Hcc-CCCeEeehHHHHHHHHHH
Confidence 00 00 00000000000 0 000 011111111111111122
Q ss_pred HHHhhhhhHHHHHHh---hhccCCCCe------------eeCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 390 VILTEFLTLSVQQAY---TMNTHMGKL------------KLPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNY 454 (605)
Q Consensus 390 ~~~~~~~~~~~~~~~---~~~~~~~~~------------~ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~ 454 (605)
..+.+....+..+.. +.+....+. .+..++..+|.+.++.+.++.++.+++++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~------- 312 (420)
T PRK09528 240 DVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA------- 312 (420)
T ss_pred HHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-------
Confidence 222222222221111 111110000 0011333444444455666666666666555443
Q ss_pred hhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHH-HHHHhhHHHHHHHHHHHHhh
Q 007405 455 AISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY-AALAGGLGCFAASILNSIIK 533 (605)
Q Consensus 455 ~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~l~~~l~~~i~ 533 (605)
.+.++++...++.+++.....+....++.+..|++.+++..+. +++...+|..+++.+.+.+.
T Consensus 313 ----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 313 ----------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence 3455666667778888888888888899999999999987765 67788999999999999887
Q ss_pred cccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007405 534 SVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 579 (605)
Q Consensus 534 ~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 579 (605)
+..| | ...|++.+++.++..++.+...+
T Consensus 377 ~~~G--------~----------~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 377 DSIG--------F----------QGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HhhC--------c----------hHHHHHHHHHHHHHHHHHHHHhc
Confidence 7333 3 56788777777766666555443
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=4.1e-21 Score=197.18 Aligned_cols=182 Identities=18% Similarity=0.221 Sum_probs=165.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
+..++.+..++++.+++++.-|.+.. .-.-+++.+|.+++..+++.+.+.+...+..|+.|+|+||| -|++++.+|.+
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~ 106 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIF 106 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHH
Confidence 44456788899999999999988776 45567788999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
++.+++++++++ ..++++.+.|.+.|+|.+.+.+..+++++|.||.+.
T Consensus 107 iW~~Av~~~~fs----------------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~---- 154 (493)
T KOG1330|consen 107 IWTLAVFASGFS----------------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK---- 154 (493)
T ss_pred HHHHHHHHHHHH----------------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh----
Confidence 999999999987 578999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
|++.++++|++.++|.++|..+++++.+..+ |||+|+..+++.++..++.++..++
T Consensus 155 --Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 155 --RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred --hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999988777 9999999999887777766665554
No 68
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=8.7e-20 Score=201.17 Aligned_cols=408 Identities=13% Similarity=0.122 Sum_probs=247.5
Q ss_pred HHHHHHHHHHHHHh-----CCCh--hHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 87 GLSVNMVTFMFYVM-----HKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (605)
Q Consensus 87 ~~~~~l~~yl~~~~-----~~s~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~ 159 (605)
+..+.+..++.+.. ..+. .+.+++.+.+.++..++.++.|+++|++ |||++++++.+++.+|.++++++
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a--- 139 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA--- 139 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh---
Confidence 44555555555532 1112 2448999999999999999999999997 99999999999999999999998
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHH
Q 007405 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (605)
Q Consensus 160 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ 239 (605)
.+..+++++|++.|+|.|+.....+.+++|..|++. |+...+.+....+
T Consensus 140 -------------------------~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~ 188 (513)
T KOG0254|consen 140 -------------------------PSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFIT 188 (513)
T ss_pred -------------------------hhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHHHHHHhh--hchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccccc
Q 007405 240 VGAIVAFTLVVYIQME--HGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELI 317 (605)
Q Consensus 240 ig~~i~p~i~~~l~~~--~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~ 317 (605)
+|..++.. .++...+ .+||..+++..+..++..+..++ .||+|+|
T Consensus 189 ~Gi~~~~~-~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~--------------------------------~pesp~~ 235 (513)
T KOG0254|consen 189 IGILLGYC-INYGTSKVYAGWRIPLGLALIPAVILALGMLF--------------------------------LPESPRW 235 (513)
T ss_pred HHHHHHHH-HhhhhccCCccHHHHHHHHHHHHHHHHHHHHh--------------------------------CCCChHH
Confidence 99999954 4444443 48998888777666555554222 4677777
Q ss_pred cccccCCCcccccCCcccccC--CCc-chhhHhhhhhccc---cCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHH
Q 007405 318 GLYEVPGKHSAIKGSGKIAHT--DDF-RCLDKAALELKED---VINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVI 391 (605)
Q Consensus 318 ~l~~~~~~~~~~~~~~~l~~~--~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 391 (605)
+.++++.+++++...++... .+. ...+......... ......|+.+.. ...+|+......+..++++....
T Consensus 236 -L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~ 312 (513)
T KOG0254|consen 236 -LIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGIN 312 (513)
T ss_pred -HHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCc
Confidence 77777766666665555441 111 1111111000000 000001111111 01122222222222222221111
Q ss_pred HhhhhhHHHHHHhhhccC-C-CC-----ee----eCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 007405 392 LTEFLTLSVQQAYTMNTH-M-GK-----LK----LPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGY 460 (605)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~-~-~~-----~~----ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (605)
....++....+..+.... . .. .. +...-..++.+++..+..|...+.+++++++....... .+.
T Consensus 313 ~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~----~~~- 387 (513)
T KOG0254|consen 313 YVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFAL----YYP- 387 (513)
T ss_pred eEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhc----cCC-
Confidence 111111222222221111 0 00 00 00012223345556677788888888887776532210 000
Q ss_pred cccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCC
Q 007405 461 EFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPK 540 (605)
Q Consensus 461 ~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~ 540 (605)
.......+..++...++.........|....+..+.+|.+.|+.+.++....+++.+++-...........+
T Consensus 388 -----~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~--- 459 (513)
T KOG0254|consen 388 -----NSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG--- 459 (513)
T ss_pred -----CcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 000002223333333334444444555666788899999999999999999999999988777666544110
Q ss_pred CCCCCCCCCCCcCcchhHHHHHHHHHHHHHHH-HHHHHHhhceecccCCCCCch
Q 007405 541 KGQPNWLAQNINTGRFDYLYWLLAVLSVINFC-AFLYSAYRYKYRSEQKHGNDY 593 (605)
Q Consensus 541 ~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~-~~~~~~~~~~~~~~~~~~~~~ 593 (605)
....|+.+++++.+..+ +++++.+++|+++.||.+...
T Consensus 460 ---------------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~ 498 (513)
T KOG0254|consen 460 ---------------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELF 498 (513)
T ss_pred ---------------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHH
Confidence 01345555666666666 788889999999887655433
No 69
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.85 E-value=4.5e-18 Score=185.64 Aligned_cols=346 Identities=14% Similarity=0.077 Sum_probs=227.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
+..++...++.+++......-++-++ .++.-|+...+++.....+-..+..+++|.++||+ .|||+++.+-++..+..
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVA 89 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHH
Confidence 44455556666666544444444443 45667888899999999999999999999999997 99999999988877666
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+.+++.... .. .+.+.+++..++.|++.+...|+..+++.|+.|+++ ...+
T Consensus 90 ~~L~~l~~~----~~-------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A 140 (524)
T PF05977_consen 90 LLLAVLAFF----GL-------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAA 140 (524)
T ss_pred HHHHHHHHh----Cc-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHH
Confidence 555543221 00 356778888899999999999999999999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccc
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAA 310 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 310 (605)
.++.....|+...+||.++|.+....|-.+.|.+.++..++.++.+...+++.+.++ .+.....+-+...++
T Consensus 141 ~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~---~~~e~~~~~l~~G~r----- 212 (524)
T PF05977_consen 141 NALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSS---LPRERFFSALREGLR----- 212 (524)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc---cchhhhhhhHHHHHH-----
Confidence 999999999999999999999999889889999988776665554433332211111 110011110100000
Q ss_pred cCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHH
Q 007405 311 FSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNV 390 (605)
Q Consensus 311 ~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 390 (605)
+.. .+ +..+..+ +...++..+...
T Consensus 213 ----------------------------------------yv~------------~~--~~l~~~l--~~~~~~~l~~~a 236 (524)
T PF05977_consen 213 ----------------------------------------YVR------------SS--PPLRSVL--LRSFLFNLFASA 236 (524)
T ss_pred ----------------------------------------HHh------------cc--hHHHHHH--HHHHHHHHhhhH
Confidence 000 00 0111111 111111111111
Q ss_pred HHhhhhhHHHHHHhhhccCCCC--------------eeeCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 391 ILTEFLTLSVQQAYTMNTHMGK--------------LKLPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAI 456 (605)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~--------------~~ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~ 456 (605)
.. .+...+..+..+.+....| +.+ .+..++.+..+.+..+.++.+++++.+++.
T Consensus 237 ~~-aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~--~~l~~~~~~~~lv~~~~~~~a~~~~~lal~--------- 304 (524)
T PF05977_consen 237 VW-ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLL--PRLRRRLSSRRLVLLASLLFALALLLLALS--------- 304 (524)
T ss_pred HH-HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH--HHhhcccCcchhhHHHHHHHHHHHHHHhcc---------
Confidence 11 1112222222222111101 111 233334444455666777777776666654
Q ss_pred hcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhccc
Q 007405 457 SHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVT 536 (605)
Q Consensus 457 ~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~ 536 (605)
.+.+..++..++.|++.....+..++.+.+.+|+++||++++++.+....+..+|+.+.|.+.+..
T Consensus 305 --------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 305 --------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356667778888999999999999999999999999999999999999999999999999987754
Q ss_pred C
Q 007405 537 G 537 (605)
Q Consensus 537 ~ 537 (605)
|
T Consensus 371 g 371 (524)
T PF05977_consen 371 G 371 (524)
T ss_pred C
Confidence 4
No 70
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.85 E-value=2.6e-18 Score=181.79 Aligned_cols=158 Identities=17% Similarity=0.214 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
...+.++.+. +++|+++.+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+.+.++
T Consensus 9 ~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~---------- 76 (377)
T PRK11102 9 MYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA---------- 76 (377)
T ss_pred HHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH----------
Confidence 3445566555 57999999999999999999999999999999997 99999999999999988888775
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+....+|..++|
T Consensus 77 ------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~ 132 (377)
T PRK11102 77 ------------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAP 132 (377)
T ss_pred ------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 466788899999999999999999999999999988 99999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 247 TLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 247 ~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
.+++++.+..+|++.|++.++..++..+......
T Consensus 133 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (377)
T PRK11102 133 IIGGWLLVWFSWHAIFWVLALAAILAAALVFFFI 166 (377)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999989999999987777666554444333
No 71
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.1e-19 Score=194.98 Aligned_cols=355 Identities=18% Similarity=0.218 Sum_probs=233.5
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccC
Q 007405 98 YVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG 177 (605)
Q Consensus 98 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 177 (605)
.+++++..+-+++.+.+..++.++..++|+++||+ |-|+++.++.++.++++++..+++.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~------------------- 125 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS------------------- 125 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 36889999999999999999999999999999998 9999999999999999999998854
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh-h
Q 007405 178 SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-H 256 (605)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~-~ 256 (605)
.+.+.+++.|+++|++.|...|++..+.+.+.|++| |+++.++.+.+..+|.+++..++|++.+. .
T Consensus 126 -------~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~ 192 (466)
T KOG2532|consen 126 -------IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSL 192 (466)
T ss_pred -------hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCC
Confidence 455578899999999999999999999999999999 99999999999999999999999999998 9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccccccccccCCCcccccCCcccc
Q 007405 257 GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIA 336 (605)
Q Consensus 257 gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~ 336 (605)
||+++|++.+++.++..++++....+.+.+ ++.. .+++.. .++.+
T Consensus 193 GW~sifY~~g~~g~i~~~~w~~~~~d~P~~----h~~i-----------------s~~El~-~I~~~------------- 237 (466)
T KOG2532|consen 193 GWPSIFYVFGIVGLIWFILWFLFYSDSPSK----HPNI-----------------SEKELK-YIEKG------------- 237 (466)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCCccc----CCCC-----------------CHHHHH-HHHhc-------------
Confidence 999999999998887777766654432211 1100 000000 01100
Q ss_pred cCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHH------HHHHhhhhhHHHHHHhhhccCC
Q 007405 337 HTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIML------NVILTEFLTLSVQQAYTMNTHM 410 (605)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 410 (605)
+...........||+ .+++..++|...+.. +..+.+....|..+..++|...
T Consensus 238 -----------k~~~~~~~~~~vP~~-----------~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~ 295 (466)
T KOG2532|consen 238 -----------KSEAHVKKKPPVPYK-----------AILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRE 295 (466)
T ss_pred -----------ccccccCCCCCCCHH-----------HHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhh
Confidence 000000000123542 233333333222211 1122223334556666666655
Q ss_pred CCe--eeCC--------------CC---CCCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCC
Q 007405 411 GKL--KLPV--------------TC---HPRGASQLQRV--GIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMP 469 (605)
Q Consensus 411 ~~~--~ip~--------------~~---~~~~~~~~~~i--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (605)
.|+ .+|. ++ +....+..+|+ .+++...++.++.+++.. .
T Consensus 296 ~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~--------------------~ 355 (466)
T KOG2532|consen 296 TGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS--------------------D 355 (466)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC--------------------C
Confidence 554 2333 11 11222333344 455555555555555441 0
Q ss_pred cchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCC
Q 007405 470 DLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQ 549 (605)
Q Consensus 470 ~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~ 549 (605)
...+..+..+.+.-...++..++.+.-..+.+| +.-+..+|+.+....+..+++|.+++.+.. +++..+|
T Consensus 356 -~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-----~~t~~eW--- 425 (466)
T KOG2532|consen 356 -EHRLLAVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT-----DNTREEW--- 425 (466)
T ss_pred -CcchHHHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC-----CCCHHHH---
Confidence 111122222222112223333344433333365 557999999999999999999999998764 1123456
Q ss_pred CCcCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007405 550 NINTGRFDYLYWLLAVLSVINFCAFLYSAY 579 (605)
Q Consensus 550 ~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~ 579 (605)
..+|++.+++.++..++|.++.+
T Consensus 426 -------~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 426 -------RIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred -------HHHHHHHHHHHHHhchheeEeec
Confidence 67899999999999988888853
No 72
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=2.3e-18 Score=208.21 Aligned_cols=154 Identities=15% Similarity=0.111 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh--HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA--DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~ 147 (605)
.+...+...++..+...+....+..++...++.+.. ..+++.+++.++..++.+++|+++||+ |||++++++.++.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 345555666666665555555666677777776544 367888999999999999999999997 99999999987776
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++.++..++... .+++.++++|+++|++.+...+...++++|.+|+++ |
T Consensus 89 ~~~~~~~~~~~~-------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r 137 (1146)
T PRK08633 89 GLTLLIVLAYYL-------------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------L 137 (1146)
T ss_pred HHHHHHHHHHHH-------------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------c
Confidence 666555443210 357889999999999999999999999999999998 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQME 255 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~ 255 (605)
+++++++..+.++|.++||.+++++.+.
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998875
No 73
>PRK10133 L-fucose transporter; Provisional
Probab=99.84 E-value=4.2e-18 Score=183.90 Aligned_cols=154 Identities=13% Similarity=-0.021 Sum_probs=124.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
....+..+....+...+........ .+.+++++|.++.+.++..+.+.++..++.++.|+++||+ |||+++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~-~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDIL-LPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 4445566666666666665444444 4456999999999999999999999999999999999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.++.+++..+... .+...++++|+++|+|.|...+..++++.|..++++
T Consensus 102 ~~~~~l~~~~~~a-------------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------ 150 (438)
T PRK10133 102 ALGAALFWPAAEI-------------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------ 150 (438)
T ss_pred HHHHHHHHHHHhc-------------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------
Confidence 9999876422110 467889999999999999999999999999766665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~ 253 (605)
|...++++.....+|..+||.+++.+.
T Consensus 151 ~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 151 GHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666788888888899999998877654
No 74
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.84 E-value=1.7e-18 Score=184.73 Aligned_cols=375 Identities=10% Similarity=-0.023 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.+|......++...+...+.++++.|+++++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.++.+.+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 467777888888888888889999999999999999999999999999999999999999997 9999999887766554
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
..........+.. . ......+++++++.|++.+...+....+..|..+ + ++.
T Consensus 82 ~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~ 133 (396)
T TIGR00882 82 FAPFFIYVFGPLL-Q-------------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNF 133 (396)
T ss_pred HHHHHHHHhhhHH-H-------------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------ccc
Confidence 4432211000000 0 0123345666788888888888888777766422 2 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhcc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 309 (605)
.++......++|..++|.+++.+.+ .+|++.|++.+++.++..++.+...++.++. ++.+ +
T Consensus 134 ~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~-------------- 194 (396)
T TIGR00882 134 EYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS-ATVA---N-------------- 194 (396)
T ss_pred ccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh-hhhh---c--------------
Confidence 5566667778999999999998865 5999999988776665554433322221100 0000 0
Q ss_pred ccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHH
Q 007405 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (605)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 389 (605)
..+.+ + +..+..+.. +..++ |.++..+.........+
T Consensus 195 ---------~~~~~-------------~-~~~~~~~~~-------------------~~l~~-~~~~~~~l~~~~~~~~~ 231 (396)
T TIGR00882 195 ---------ALGAN-------------A-SAFSLKLAL-------------------ELFRQ-RKFWMFVLYVVGVACVY 231 (396)
T ss_pred ---------ccccc-------------c-CCCCHHHHH-------------------HHHcC-CcHHHHHHHHHHHHHHH
Confidence 00000 0 000000000 00011 11111111111111111
Q ss_pred HHHhhhhhHHHHHHh---hhccCCCCe------------eeCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 390 VILTEFLTLSVQQAY---TMNTHMGKL------------KLPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNY 454 (605)
Q Consensus 390 ~~~~~~~~~~~~~~~---~~~~~~~~~------------~ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~ 454 (605)
..+.+....+..... +.+....++ .+..++..+|.+.++.+.++.++.++.+......
T Consensus 232 ~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~------- 304 (396)
T TIGR00882 232 DVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA------- 304 (396)
T ss_pred HHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc-------
Confidence 111111112211111 001000010 0111334444555555666666666655443332
Q ss_pred hhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHH-HHHHhhHHHHHHHHHHHHhh
Q 007405 455 AISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAY-AALAGGLGCFAASILNSIIK 533 (605)
Q Consensus 455 ~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~l~~~l~~~i~ 533 (605)
.+.+++++..++.+++..........+..+..|++.++++.+. ++....+|+.+++.+.+.+.
T Consensus 305 ----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~ 368 (396)
T TIGR00882 305 ----------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMY 368 (396)
T ss_pred ----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHH
Confidence 3455666667777887777666677777788888888887766 67899999999999999887
Q ss_pred cccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHH
Q 007405 534 SVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLY 576 (605)
Q Consensus 534 ~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~ 576 (605)
+..| +...|++.+++.++..++..+
T Consensus 369 ~~~G------------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 369 DSIG------------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred Hhcc------------------cHHHHHHHHHHHHHHHHHHHH
Confidence 7443 456788877777776665443
No 75
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.83 E-value=6.2e-19 Score=185.59 Aligned_cols=154 Identities=13% Similarity=0.049 Sum_probs=134.7
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 007405 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (605)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 170 (605)
...+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.++
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~-------------- 80 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS-------------- 80 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh--------------
Confidence 345578899999999999999999999999999999999997 99999999999999998888876
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH-HHH
Q 007405 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF-TLV 249 (605)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p-~i~ 249 (605)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+.+.++|..++| .++
T Consensus 81 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 81 --------------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred --------------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHH
Confidence 467889999999999999999999999999999988 99999999999999999999 567
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q 007405 250 VYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 250 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
+.+.+..+|++.|++.+++.++..+..+..
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHhee
Confidence 777777899999988777665554444433
No 76
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.83 E-value=6.5e-18 Score=180.31 Aligned_cols=179 Identities=9% Similarity=-0.045 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~ 147 (605)
|.++...+. +...+....+.+.+..++.+ ++|+|.+|.+++.+++.+++.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~-f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSC-LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 445444443 33333334455555666655 8999999999999999999999999999999997 99999999999998
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
+.++.++++... .. .++..+++.|++.|++ ++..+.....++++||+++ |
T Consensus 112 i~~~~~~~a~~~----~~-------------------~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------r 161 (462)
T PRK15034 112 IPCVWLGIAVQN----PN-------------------TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------Q 161 (462)
T ss_pred HHHHHHHHHHcc----cC-------------------CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------h
Confidence 888877764110 00 3678899999999998 6677888999999999999 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-----HHh-------------hhchHHHHHHHHHHHHHHHHHHHHh
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVY-----IQM-------------EHGWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~-----l~~-------------~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
+++++++....++|..++++++.. +.. ..+|+.++++..+..++..++.++.
T Consensus 162 G~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 162 GSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999865566666555444432 222 3347777777666665555554443
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.83 E-value=2.9e-18 Score=206.95 Aligned_cols=136 Identities=16% Similarity=0.084 Sum_probs=107.8
Q ss_pred hHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH--HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCc
Q 007405 105 ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI--YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA 182 (605)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 182 (605)
...++..+++.+...++.+++|+++||+ |||+++.+...+ ..+......+..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~------------------------- 105 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL------------------------- 105 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
Confidence 3467778889999999999999999997 999986442222 211211111110
Q ss_pred cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHH
Q 007405 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF 262 (605)
Q Consensus 183 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f 262 (605)
.+++.++++|+++|++.+...|...+++.|++++++ |+.++++...+.++|.++||.++|++.+..+|++.|
T Consensus 106 --~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~ 177 (1140)
T PRK06814 106 --NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILV 177 (1140)
T ss_pred --hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 367889999999999999999999999999999998 999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHH
Q 007405 263 GALAIAMGISNM 274 (605)
Q Consensus 263 ~~~~~~~~i~~~ 274 (605)
++.+++.+++++
T Consensus 178 ~~~~~~~~~~~~ 189 (1140)
T PRK06814 178 ALLMGIAVLGWL 189 (1140)
T ss_pred HHHHHHHHHHHH
Confidence 544444444333
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.82 E-value=1.1e-17 Score=177.70 Aligned_cols=327 Identities=10% Similarity=0.014 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchH----HHHHHHHHHHHHHHHHH
Q 007405 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY----WTIAIFTTIYLAGLTGI 153 (605)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~----~~~~~~~~~~~~~~~~~ 153 (605)
.++...+...+.++++.|+ +++|.|..+.+++.+++.+...++.+++|+++||+ ||+ +.+.+..++. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHHH
Confidence 3444455556677888898 45899999999999999999999999999999997 984 3332222211 11111
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
..+ .+.+.+++.|++.|++.+...+...++..|. .++ |++.++.
T Consensus 89 ~~~----------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~ 132 (382)
T PRK11128 89 FGA----------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGK 132 (382)
T ss_pred Hhc----------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcch
Confidence 111 4677888899999999998888888887775 233 6666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCc
Q 007405 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSS 313 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 313 (605)
.....++|..+||.+++++.+++||+..|++.++..++..+.. ...++. ++++++ +
T Consensus 133 ~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~---~~~~~~--------------------~ 188 (382)
T PRK11128 133 VRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPTI---MPQGES--------------------R 188 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCCC---CCcccc--------------------c
Confidence 7777789999999999999999999999987776544433322 222211 110000 0
Q ss_pred cccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhh-hhHHHHHHHHHH
Q 007405 314 SELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-IPACTIMLNVIL 392 (605)
Q Consensus 314 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~ 392 (605)
++ . .+.. ..+ .+....|.++.... .++....+...+
T Consensus 189 -----------~~--~-------~~~~------------------~~~-----~~i~~~~~~~~~~~~~~l~~~~~~~~~ 225 (382)
T PRK11128 189 -----------QQ--E-------SAGW------------------PAW-----KALLKEPTVWRFLLCVSLLQGSHAAYY 225 (382)
T ss_pred -----------cc--c-------cccc------------------chH-----HHHHcChhHHHHHHHHHHHHHHhHhHH
Confidence 00 0 0000 000 00000111111111 111111111111
Q ss_pred hhhhhHHHHHHhhhccCCCCe--------e----eCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Q 007405 393 TEFLTLSVQQAYTMNTHMGKL--------K----LPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGY 460 (605)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~--------~----ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (605)
... ..+..+ .+.+....+. . ...++..+|.+.++.+..++++.+++++.++..
T Consensus 226 ~~~-~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~------------- 290 (382)
T PRK11128 226 GFS-AIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST------------- 290 (382)
T ss_pred HHH-HHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------------
Confidence 111 112211 1222111010 0 111455666777777777777777776655443
Q ss_pred cccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHH-HHhhHHHHHHHHHHHHhhcccC
Q 007405 461 EFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA-LAGGLGCFAASILNSIIKSVTG 537 (605)
Q Consensus 461 ~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~l~~~l~~~i~~~~~ 537 (605)
.+.+++++..++.|+++++..+....++.+.. ++.+++++++.+ ....+|..+|+.+.|.+.+..+
T Consensus 291 ----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 291 ----------TALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34556667788889999999999999988874 555688999887 5667888999999998877444
No 79
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.82 E-value=7.3e-17 Score=173.33 Aligned_cols=370 Identities=13% Similarity=0.036 Sum_probs=217.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccch-HHHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWTIAIFTTIYLAGL 150 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR-~~~~~~~~~~~~~~~ 150 (605)
..+.+..++...++....++++.|+++++|++..+.+++.+.+.++..++++++|+++||+ || |+++.++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Confidence 3455566666666656679999999999999999999999999999999999999999997 65 778888887776666
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhcc--------CCCCCch
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ--------FDERSKD 222 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~--------~~~~~~~ 222 (605)
....+. .+++.+++.|++.|++.+...+...++..+. .....
T Consensus 84 ~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-- 133 (418)
T TIGR00889 84 FFAAQV----------------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP-- 133 (418)
T ss_pred HHHHHh----------------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC--
Confidence 666554 3566777888888888776666655543222 22112
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHH
Q 007405 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVA 302 (605)
Q Consensus 223 ~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 302 (605)
|.+.++ .+|..+||.+++.+.....|. +|++.++..++..+. .+..++.++.+++++. +..
T Consensus 134 ----~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~--~~~----- 194 (418)
T TIGR00889 134 ----PIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKM--SIK----- 194 (418)
T ss_pred ----Ceeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCcccccc--CHH-----
Confidence 444444 378888888888874333344 455555554444433 2222322111000000 000
Q ss_pred HHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhh-h
Q 007405 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP-I 381 (605)
Q Consensus 303 ~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~ 381 (605)
+... .+. .+....+++...+. .
T Consensus 195 ----------------------------------~~~~---~~~--------------------~~~~k~~~~~~~~~~~ 217 (418)
T TIGR00889 195 ----------------------------------VMLG---LDA--------------------FILFKNKRMAIFFFFS 217 (418)
T ss_pred ----------------------------------HHhh---hhH--------------------HHHhcCCCeeeHHHHH
Confidence 0000 000 00000011111111 1
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHhhhcc--------CCCCe------------eeCCCCCCCCCChhHHHHHHHHHHHHHH
Q 007405 382 PACTIMLNVILTEFLTLSVQQAYTMNT--------HMGKL------------KLPVTCHPRGASQLQRVGIGLAVSILSV 441 (605)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~------------~ip~~~~~~~~~~~~~i~~G~~~~~~~~ 441 (605)
++........+ .....+... .+.+. ...+. .++.++..+|++.++.+.++.++.++++
T Consensus 218 ~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~ 295 (418)
T TIGR00889 218 MLLGAPLQITN-IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRF 295 (418)
T ss_pred HHHHhHHHHHH-HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 11111111111 111111111 11111 00000 1111444556666666777777766665
Q ss_pred HHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHH-HHhhH
Q 007405 442 IWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAA-LAGGL 520 (605)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~l 520 (605)
..+..... .. .+.+.++...++.+++++...+....++.+.+|++.||+++|+.+ ....+
T Consensus 296 ~l~~~~~~------------------~~-~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 296 GFFAYGDP------------------EY-FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred HHHHHcCc------------------ch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 55543210 00 123345556778899999999999999999999999999999997 67889
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 007405 521 GCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRY 581 (605)
Q Consensus 521 g~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~ 581 (605)
|..+|+.+.+.+.+..+ .++..+ ++..|++.+++.++..+.++++.++.
T Consensus 357 g~~iGp~l~G~l~~~~g--~~~~~~----------~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMF--AYGTFD----------WQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHhc--cccCCc----------hHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999998877544 111112 36678888888888888888777644
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.81 E-value=6.2e-18 Score=177.95 Aligned_cols=163 Identities=17% Similarity=0.092 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+..+...++.....+...+.++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 45556666666666666777777789999999999999999999999999999999999997 99999999999999998
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccch-hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW-QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
+++.++ . +.+.++++|+++|++.+. .+...++++|.+|+++ |++
T Consensus 82 ~~~~~~----------------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~ 126 (366)
T TIGR00886 82 LWAGLA----------------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGT 126 (366)
T ss_pred HHHHHH----------------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhH
Confidence 888776 4 678888999999999665 4567789999999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------hhchHHHHHH-HHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGA-LAIAM 269 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~----------~~gw~~~f~~-~~~~~ 269 (605)
..+++....++|..+++.+++.+.. ..+|++.|++ .++..
T Consensus 127 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 127 ALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 9999887778888888777766554 2379999844 34443
No 81
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=9.8e-17 Score=175.78 Aligned_cols=174 Identities=14% Similarity=0.115 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc----cchHHH-HHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWT-IAIFT 143 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~GR~~~-~~~~~ 143 (605)
|..+.++...+...+..+.....++.|+. +.|.+.++.+.. +..... +++.++.|+++||+ +||||. ++++.
T Consensus 12 ~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~ 88 (491)
T PRK11010 12 PNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQ 88 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHH
Confidence 34566777777777777777777788865 559998888875 222222 36889999999994 288886 55677
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
++..++...+++.. +. .+.+.+.+.+++.+++.+...+...++..|++|+++
T Consensus 89 i~~~~~~~~~a~~~------~~-------------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~--- 140 (491)
T PRK11010 89 LLLLVAIAAMGFLE------PG-------------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE--- 140 (491)
T ss_pred HHHHHHHHHHHHcC------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh---
Confidence 66666666665531 11 367778888899999999999999999999999988
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-hhchHHHHHHHHHHHHHHHHHH
Q 007405 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 224 ~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~-~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
|+++.++...+..+|..+++.+++++.+ ..|||..|++.++..++..+..
T Consensus 141 ---rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 141 ---RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 5699999999887766554443
No 82
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.79 E-value=5.2e-16 Score=166.20 Aligned_cols=171 Identities=11% Similarity=0.024 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++.+....++..+.+ ++...+.+.+++++|++..+.+++.+.+.++..++.++.|++.||+ |||+++.++.+++.++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 444444444444443 5555566777999999999999999999999999999999999997 99999999999999998
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+++..+... .+++.++++|++.|+|.|...+..++++.+..|+++ |++.
T Consensus 83 ~l~~~~~~~-------------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~ 131 (410)
T TIGR00885 83 FLFWPAAEI-------------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRR 131 (410)
T ss_pred HHHHHHHhh-------------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHH
Confidence 776543210 367888999999999999999999999999999888 8888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--------------------------hhchHHHHHHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQM--------------------------EHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~--------------------------~~gw~~~f~~~~~~~~i~~~ 274 (605)
.++.+...++|..++|.+++.+.. ..+||++|++.+++.++..+
T Consensus 132 ~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 132 LNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887742 24699999887776554433
No 83
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.78 E-value=6.3e-17 Score=169.91 Aligned_cols=146 Identities=16% Similarity=0.130 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCc
Q 007405 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDN 168 (605)
Q Consensus 89 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (605)
...+.+.+.+++|++.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+ .+
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~------------ 84 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA------------ 84 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh------------
Confidence 34455567889999999999999999999999999999999997 99999999988887777665 32
Q ss_pred ccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007405 169 CDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (605)
Q Consensus 169 c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i 248 (605)
.+...+++.|++.|++.+...+..+....|.++ ++ |++.+++++...++|..+++.+
T Consensus 85 ----------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~ 141 (355)
T TIGR00896 85 ----------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAA 141 (355)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHH
Confidence 356778899999999999888888888888886 46 8999999999999999999999
Q ss_pred HHHHHhhh--chHHHHHHHHHHHHH
Q 007405 249 VVYIQMEH--GWGSAFGALAIAMGI 271 (605)
Q Consensus 249 ~~~l~~~~--gw~~~f~~~~~~~~i 271 (605)
++.+.+.. +|++.|.+.++..++
T Consensus 142 ~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 142 TVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 99887765 399888776654433
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.78 E-value=5.7e-17 Score=171.57 Aligned_cols=156 Identities=19% Similarity=0.211 Sum_probs=114.4
Q ss_pred HHHHHHHHHhC--CChhHHHHHHHH--HHH---HHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 007405 91 NMVTFMFYVMH--KSFADSSNAVNN--FLG---ISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (605)
Q Consensus 91 ~l~~yl~~~~~--~s~~~~~~~~~~--~~~---~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (605)
+...++.+++. .++++.+...+. +.. ...++.++.|+++||+ |||++++++.++..++.++++++......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 35556666544 334444443332 322 2346789999999997 99999999999999998888875221000
Q ss_pred CCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 007405 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (605)
Q Consensus 164 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 243 (605)
.......++++|+++|++.+...+...++++|.+++++ |+...++.+.+..+|..
T Consensus 92 -------------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~ 146 (394)
T TIGR00883 92 -------------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLL 146 (394)
T ss_pred -------------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHH
Confidence 00112357889999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHH--------hhhchHHHHHHHHHHHHHHH
Q 007405 244 VAFTLVVYIQ--------MEHGWGSAFGALAIAMGISN 273 (605)
Q Consensus 244 i~p~i~~~l~--------~~~gw~~~f~~~~~~~~i~~ 273 (605)
+++.++..+. +..+|++.|++.++..++..
T Consensus 147 i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 147 LAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 9998876654 35689999988766555443
No 85
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=1.9e-17 Score=183.19 Aligned_cols=374 Identities=14% Similarity=0.082 Sum_probs=228.2
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccC
Q 007405 98 YVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG 177 (605)
Q Consensus 98 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 177 (605)
+..+.+.....+..+++.++..+++++.|++|||+ |||+++++++++.+++.++.+++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a--------------------- 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA--------------------- 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 45667788888999999999999999999999995 99999999999999999888887
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 178 SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (605)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g 257 (605)
.++..+++.|++.|++.++...+...+++|.+++++ |+.+.++ ......++.++|.+++++.. +
T Consensus 169 -------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~ 232 (521)
T KOG0255|consen 169 -------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--D 232 (521)
T ss_pred -------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--h
Confidence 689999999999999999999999999999999999 9999999 88888888889999999887 7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccccccccccCCCcccccCCccccc
Q 007405 258 WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAH 337 (605)
Q Consensus 258 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~ 337 (605)
||+.+++..+..++.++..++ .+|+|+| +..+++.+++.+..+++.+
T Consensus 233 Wr~~~~~~~~~~~~~~~~~~l--------------------------------~~Es~rw-l~~~g~~~~a~~~l~~~a~ 279 (521)
T KOG0255|consen 233 WRWLFWIISIPSGLFLLLWFL--------------------------------PPESPRW-LLSKGRIDEAIKILKKIAK 279 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHc--------------------------------cCcChHH-HHHcCchHHHHHHHHHHHh
Confidence 999999888776665554221 2355555 5555544444444333321
Q ss_pred CC-----CcchhhHhhhhhccccCCCCC----Cccccchhhhhhhhhhhhhhhh-HHHHHHHHHHhhhhh----HHHHHH
Q 007405 338 TD-----DFRCLDKAALELKEDVINPSP----WKLCTVTQVEEVKTLVRLVPIP-ACTIMLNVILTEFLT----LSVQQA 403 (605)
Q Consensus 338 ~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~ 403 (605)
.+ .....+..............| +.++... +-++.++.....+ .....++........ .+..+.
T Consensus 280 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~l~~~~~~~~~~~~~~~~~y~gl~~~~~~lg~~~~~~~~ 357 (521)
T KOG0255|consen 280 LNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTP--RLRYRTLYLLFIWFVFSLVYYGLSLNVSGLGGNIYLNFT 357 (521)
T ss_pred hcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCH--HHHHHHHHHHHHHHHHhHHHHhhhhhhhhcCchHHHHHH
Confidence 10 001111110000000000000 0001000 0112222221111 111111111110000 000000
Q ss_pred hhhccCCCCeeeCC----CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHH
Q 007405 404 YTMNTHMGKLKLPV----TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQ 479 (605)
Q Consensus 404 ~~~~~~~~~~~ip~----~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~ 479 (605)
.. +.+.+|. .....+.+++.....++++..++.++.++.... ...+.....
T Consensus 358 ~~-----~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~ 412 (521)
T KOG0255|consen 358 LS-----GLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD--------------------LGGWLHWIL 412 (521)
T ss_pred HH-----HHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc--------------------chhHHHHHH
Confidence 00 0112222 111122334455667777777887777765211 111122223
Q ss_pred HHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHH
Q 007405 480 YCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYL 559 (605)
Q Consensus 480 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~ 559 (605)
..+...+....+.....+..+..|+..|+.+.+..+....+|+.+++.+......... . ..
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~-------~------------~~ 473 (521)
T KOG0255|consen 413 PLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFP-------L------------LG 473 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-------c------------ch
Confidence 3333344445555558888899999999999999999999999999998754322110 0 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhhceecccCC
Q 007405 560 YWLLAVLSVINFCAFLYSAYRYKYRSEQK 588 (605)
Q Consensus 560 f~~~a~l~~v~~~~~~~~~~~~~~~~~~~ 588 (605)
+..++.+..+..++...+.++++.+...+
T Consensus 474 ~~~~~~~~~l~~~~~~~~lpet~~~~l~~ 502 (521)
T KOG0255|consen 474 LILFGWLALLLGLLSLLLLPETKGKPLPG 502 (521)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCCCCCch
Confidence 22245666666666667778887765533
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.78 E-value=4.4e-17 Score=175.96 Aligned_cols=173 Identities=16% Similarity=0.142 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchHH-HHHHHHHHHHHHHHHHH
Q 007405 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIYLAGLTGIT 154 (605)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~~-~~~~~~~~~~~~~~~~~ 154 (605)
+...+....+..+++.|+++++|+++.+++++.++..+...+..|+.|+++||. +|||| .++++.++..++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 344455556677899999999999999999999999999999999999999984 48754 56677777777777766
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC-CCCchhhhhhhHHHHH
Q 007405 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLDRFFNF 233 (605)
Q Consensus 155 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~-~~~~~~~~~r~~~~~~ 233 (605)
.... ... ......+++.+++.+++.+.......++.+|..+ +++ |++..++
T Consensus 89 ~~~~---~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~ 140 (437)
T TIGR00792 89 TTPD---FSA-------------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTF 140 (437)
T ss_pred hCCC---CCc-------------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHH
Confidence 5311 000 0235566677778888888887788889999875 455 8999898
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-------hhchHHHHHHHHHHHHHHHHHHHHh
Q 007405 234 FYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~-------~~gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
.....++|..+++.+.+.+.. ..+|++.+.+.+++.++..++.+..
T Consensus 141 ~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 141 RRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG 193 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888888777766655542 4579999888877766555544333
No 87
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.77 E-value=6.4e-23 Score=222.57 Aligned_cols=387 Identities=16% Similarity=0.143 Sum_probs=235.5
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccch
Q 007405 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (605)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 185 (605)
..++..+...++..++.+++|+++||+ |||++++++.++..++.++..++... .
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-------------------------~ 100 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-------------------------N 100 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-------------------------c
Confidence 457888999999999999999999997 99999999999999999998886210 1
Q ss_pred hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hhchHHHH
Q 007405 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---EHGWGSAF 262 (605)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~---~~gw~~~f 262 (605)
+...+.++|++.|++.|+..+..+.++.|..|++. |+...++......+|..++..++-.+.+ ..+||+.+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~ 174 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILL 174 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccc
Confidence 67889999999999999999999999999999999 9999999888888988888776544433 24599888
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcc
Q 007405 263 GALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFR 342 (605)
Q Consensus 263 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 342 (605)
++..+..++.++... .+||||+| ++.+++.+++.+..+++++.+..+
T Consensus 175 ~~~~~~~l~~~~~~~--------------------------------~~pESP~w-L~~~~~~~~A~~~l~~~~~~~~~~ 221 (451)
T PF00083_consen 175 IFGAIPSLLVLLLRF--------------------------------FLPESPRW-LLSKGRDEEAEKVLRKLRGKEIED 221 (451)
T ss_pred ccccccccccccccc--------------------------------ccccccce-eccccccccccccccccccccccc
Confidence 877766544333221 27999999 999999999998888865432211
Q ss_pred h-hhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHH-HHHhhhhhHHHHHHhhhccC-C-----CCee
Q 007405 343 C-LDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN-VILTEFLTLSVQQAYTMNTH-M-----GKLK 414 (605)
Q Consensus 343 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 414 (605)
. .+...............|+.....+ ..+++++..+.+.....+.+ .......+.+.. ..+.+.. . ....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~ 299 (451)
T PF00083_consen 222 EEIEEIKAEKKESQESKASWRDLFRNK-KYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNSFLATLILGLVN 299 (451)
T ss_pred ccccccccccccccccceeeeeccccc-ccccccccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence 1 0110000000000001121111111 01222222222222221111 011111111111 1111111 1 0111
Q ss_pred eCC----CCCCCCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHh
Q 007405 415 LPV----TCHPRGASQLQRVGIGLAVSILSVIWAGI-FERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVF 489 (605)
Q Consensus 415 ip~----~~~~~~~~~~~~i~~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~ 489 (605)
++. ....++.+++..+..|..+++++++.++. .... .++ ... .+...++...++.......
T Consensus 300 ~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~----------~~~---~~~-~~~~~i~~~~l~~~~~~~g 365 (451)
T PF00083_consen 300 FLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLG----------VSS---SSW-WSILSIVFLALFFAFFSLG 365 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccc----------ccc---ccc-cccccceeeeecccccccc
Confidence 111 12233344444455566666666555541 1000 000 000 1222222122122222223
Q ss_pred hhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHH
Q 007405 490 CIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVI 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v 569 (605)
..+....+..|.+|.+.|+.+.|+....+.+++++++.+.+.+.+..+ ++ ..|++.++++++
T Consensus 366 ~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-------~~-----------~~~~i~~~~~~i 427 (451)
T PF00083_consen 366 WGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-------GW-----------GVFLIFAGVCLI 427 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc-------cc-----------ccchhhHHHHHH
Confidence 456666788999999999999999999999999999888776544211 11 456777788888
Q ss_pred HHHHHHHHHhhceecccCCCCC
Q 007405 570 NFCAFLYSAYRYKYRSEQKHGN 591 (605)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~ 591 (605)
..++.+++.+++|+++.||.++
T Consensus 428 ~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 428 AIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred HHhheeEEEeeCCCCCHHHHHh
Confidence 8888888999999998877554
No 88
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=4.6e-16 Score=159.09 Aligned_cols=382 Identities=13% Similarity=0.070 Sum_probs=248.6
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~ 143 (605)
++.++|.++..... +...+..+.+.+.+.+++++++|+|+.|.++++.+..+...+..++-|.+.||+ |-|++..+++
T Consensus 9 k~~~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHH
Confidence 34455555544443 334444566777888999999999999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
++.++-.+..+++... .+.+.+++..++.|++.+ ..+...+.++.+||+++
T Consensus 87 ~l~~IP~~~~~~a~~~-------------------------~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~--- 137 (417)
T COG2223 87 LLLLIPCLGLAFAVTY-------------------------PSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEK--- 137 (417)
T ss_pred HHHHHHHHHHHHHccC-------------------------CchHHHHHHHHHHhcccc-eehcccccccccCChhh---
Confidence 9988888888877331 344788888899999955 45777899999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---hHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHH
Q 007405 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVL 300 (605)
Q Consensus 224 ~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 300 (605)
++.+.+++. ..|+|..+...++..+....| |+....+..+..++..+.+++..+.....++..++...
T Consensus 138 ---qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~----- 208 (417)
T COG2223 138 ---QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP----- 208 (417)
T ss_pred ---hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-----
Confidence 999999999 899999999999998888888 99998888888888777766655543222221111000
Q ss_pred HHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhh
Q 007405 301 VAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVP 380 (605)
Q Consensus 301 ~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 380 (605)
+. .+.+...+..+.+..
T Consensus 209 --------------------------------------------~~-------------------~~~v~~~~~~W~lsl 225 (417)
T COG2223 209 --------------------------------------------AQ-------------------LKAVFSNKDTWLLSL 225 (417)
T ss_pred --------------------------------------------hH-------------------HHHHhcCcchHHHHH
Confidence 00 000010111112211
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHHhhhccCCCC-----eeeCC-------CCCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 007405 381 IPACTIMLNVILTEFLTLSVQQAYTMNTHMGK-----LKLPV-------TCHPRGASQLQRVGIGLAVSILSVIWAGIFE 448 (605)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ip~-------~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~ 448 (605)
+......-++.+......+.......+....+ +.++. +...||.+..+...+.+..++++...+.+..
T Consensus 226 lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~ 305 (417)
T COG2223 226 LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccc
Confidence 21222222222222222222222222222211 11111 5567888877777777777777777666542
Q ss_pred HHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHH
Q 007405 449 RYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASIL 528 (605)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l 528 (605)
.. . ... .+.+..+..++.+++..+.-.-..+-.+..+.|+ +-|.+.|+....+.+|++.-|..
T Consensus 306 ~~-------~--------~~~-~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~ 368 (417)
T COG2223 306 TG-------F--------GHG-GSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLA 368 (417)
T ss_pred cc-------c--------ccC-cchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHH
Confidence 10 0 001 2233333333333333333333444455555554 56889999999999999999999
Q ss_pred HHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhce
Q 007405 529 NSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYK 582 (605)
Q Consensus 529 ~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~ 582 (605)
.+...+.+| .+...|+++..+.+++.+..+....|.+
T Consensus 369 ~g~~~~~tg-----------------~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 369 FGVSLDLTG-----------------SYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred HHHHHHhcc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 998887665 2356788888888888888887765543
No 89
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.76 E-value=7.2e-16 Score=168.07 Aligned_cols=152 Identities=15% Similarity=0.137 Sum_probs=125.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 169 (605)
.....|+..++|-+ ....|+.+.+.++..+..++.|.|||.+ |||+.++++.++.++|.+.++.+
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA------------- 128 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA------------- 128 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC-------------
Confidence 45667899999875 5567888899999999999999999986 99999999999999999999876
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 007405 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (605)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~ 249 (605)
++...++++..+.|+|.|... .....++|..|.+. |..+..+......+....+|.++
T Consensus 129 ---------------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia 186 (599)
T PF06609_consen 129 ---------------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIA 186 (599)
T ss_pred ---------------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHH
Confidence 678899999999999976654 55667899999988 88887776666666666788888
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 250 VYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 250 ~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
..+..+.+|||.|++.++...+++++.++
T Consensus 187 ~~~~~~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 187 QLFAAHSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HHhccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 77776778999999998877666654433
No 90
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.76 E-value=2.9e-15 Score=160.23 Aligned_cols=166 Identities=14% Similarity=0.110 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc----cchHH-HHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYW-TIAIFTTIYLAG 149 (605)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~GR~~-~~~~~~~~~~~~ 149 (605)
+...+.+.+.+.-....+|.|+.+ .|+|.++.+++..+... .+..++.|+++||+ +|||| .+.++.++..++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 334455555555556678888875 59999999988665554 68889999999996 27765 677778877777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
+..+.+... . .+.+.+++..++.+++.+...+...++..|.+|+++ |++
T Consensus 82 ~~~l~~~~~------~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~ 130 (402)
T PRK11902 82 IAAMAFCPP------H-------------------AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGA 130 (402)
T ss_pred HHHHHhcCc------c-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhH
Confidence 776665310 0 345666666667788888888999999999999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~-~gw~~~f~~~~~~~~i~~~ 274 (605)
+.++...+..+|..+++.+++++.+. .|||..|++.++..++..+
T Consensus 131 ~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 131 GAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998885 4999999988776655444
No 91
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.75 E-value=6.2e-16 Score=162.39 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc----cchHHHH-HHHHHHHHHHHHHHHHhhhcccc
Q 007405 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWTI-AIFTTIYLAGLTGITLCATMKVF 162 (605)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~GR~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 162 (605)
+.....+.+.+++|+|.++.++.... .+...+ .++.|+++||+ +||||.+ +.+.++..+.+..+++...
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~---- 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP---- 79 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc----
Confidence 44445556667889999999988654 333344 88999999996 4899975 5666666666555554310
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 007405 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (605)
Q Consensus 163 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 242 (605)
. .+.+.+....++.+++.+...+...++++|.+|+++ |+.+.++...+.++|.
T Consensus 80 --~-------------------~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~ 132 (356)
T TIGR00901 80 --S-------------------TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGM 132 (356)
T ss_pred --c-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHH
Confidence 0 345556666667788888888999999999999988 9999999999999999
Q ss_pred HHHHHHHHHHHhhhc--------hHHHHHHHHHHHHHHHHHHHH
Q 007405 243 IVAFTLVVYIQMEHG--------WGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 243 ~i~p~i~~~l~~~~g--------w~~~f~~~~~~~~i~~~~~~~ 278 (605)
.+++.+++++....| ||..|++.++..++..+..++
T Consensus 133 ~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 133 LLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888 999999888876665544443
No 92
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.75 E-value=4.9e-15 Score=159.31 Aligned_cols=418 Identities=11% Similarity=0.015 Sum_probs=238.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhh----ccchHHHHHHH-HHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADA----YLGRYWTIAIF-TTI 145 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~----~~GR~~~~~~~-~~~ 145 (605)
++.+..+.+...+++....++++.|+ +.+|.+....+++..+..+...+..|+.|++||| + ||||.++++ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 55566666666677555566666665 6899999999999999999999999999999995 6 999998875 555
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
.+++.++++++.....+... . .-...+......++++..+..++....++...++++|.+|+++++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~----------~-~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~--- 149 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGD----------N-LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR--- 149 (477)
T ss_pred HHHHHHHHHhCchhhhhccc----------c-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH---
Confidence 55666666654321100000 0 000000011234445555566788888888899999999988621
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH--Hhhh-------------chHHHHHHHHHHHHHHHHHHHHhcccccccCCCC
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYI--QMEH-------------GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGG 290 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l--~~~~-------------gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 290 (605)
++.+.++.....++|..+|+.+++++ .+.. +.++.|++.+++.+++.++..+..+|.+..+++.
T Consensus 150 -~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~ 228 (477)
T TIGR01301 150 -TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDD 228 (477)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcccc
Confidence 35788889999999999999998865 2211 5678899888887777776666555543211110
Q ss_pred CchhHHHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhh
Q 007405 291 SPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVE 370 (605)
Q Consensus 291 ~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (605)
.+.. -++.. ++.+....+. . .++.+..-
T Consensus 229 ~~~~------------------------~~~~~------------~~~~~~~~~~---~----------i~~~~~~m--- 256 (477)
T TIGR01301 229 FINS------------------------EAAPP------------SKHGEEAFFG---E----------LFGAFKYL--- 256 (477)
T ss_pred chhh------------------------hcccc------------cccchhhhHH---H----------HHHHHHHC---
Confidence 0000 00000 0000000000 0 00000000
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhhh-cc----------CCC--------------CeeeCCCCCCCCCC
Q 007405 371 EVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTM-NT----------HMG--------------KLKLPVTCHPRGAS 425 (605)
Q Consensus 371 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~--------------~~~ip~~~~~~~~~ 425 (605)
-|.+.+++...++.-+-|..+....|.++-+...- +. +.+ ++.+|. ..++.+
T Consensus 257 -P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~--l~~~~g 333 (477)
T TIGR01301 257 -PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEK--LCRGWG 333 (477)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhc
Confidence 01111222222222222333333334333321110 00 000 112222 112222
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhcCccccccCCCCcch-HHHHHHHHHHHHHHhHhhhhhhHHHHHh
Q 007405 426 Q-LQRVGIGLAVSILSVIWAGIFERYRR---NYAISHGYEFSFLTAMPDLS-AYWLLIQYCLIGIAEVFCIVGLLEFLYE 500 (605)
Q Consensus 426 ~-~~~i~~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~s-~~~lv~~~~l~g~g~~~~~~~~~~~~~~ 500 (605)
. +..-.++.++.+++++...++..... .......+.. .+ .. .+..+..+.++|+.....+...++++.+
T Consensus 334 ~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~ 407 (477)
T TIGR01301 334 AGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLP-----PP-TGIKASALIVFAILGIPLAITYSIPFALASI 407 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccC-----cc-hhhHHHHHHHHHHhhHHHHHHHHHhHHHHHH
Confidence 2 22236777777788777765532100 0000001000 01 11 3556677788899999999999999999
Q ss_pred hcch--hHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007405 501 EAPD--AMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSA 578 (605)
Q Consensus 501 ~~P~--~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 578 (605)
..|+ +..|..+|+.|.+..+...+.+...+.+.+..| + +-...+.+.++..+++.+..++..
T Consensus 408 ~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g--~--------------~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 408 RSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG--G--------------GNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC--C--------------CCeeHHHHHHHHHHHHHHHHHHhC
Confidence 9995 455999999999999999999988887666554 1 112467777778888888777776
Q ss_pred hhce
Q 007405 579 YRYK 582 (605)
Q Consensus 579 ~~~~ 582 (605)
++.+
T Consensus 472 ~~~~ 475 (477)
T TIGR01301 472 PRPR 475 (477)
T ss_pred CCCC
Confidence 6543
No 93
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.71 E-value=4.6e-15 Score=148.85 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=105.0
Q ss_pred ChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCc
Q 007405 103 SFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA 182 (605)
Q Consensus 103 s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 182 (605)
+..-+|.+-+.|.+...+.++..|.+|||| |||+++++|.+..++...+.+.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S-------------------------- 118 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS-------------------------- 118 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 445678888999999999999999999998 99999999999999988888876
Q ss_pred cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 183 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
.++..++++|++.|+..|-. ..+.++++|.+++++ |+.+++....+..+|..+||++++++..
T Consensus 119 --~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 --RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred --HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 57877888899999998765 677899999999998 9999999999999999999999999987
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=8.4e-16 Score=154.98 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=137.6
Q ss_pred HhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCC
Q 007405 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (605)
Q Consensus 99 ~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 178 (605)
.++-++++.+++...+.+...+..|+.|.+.||+ |+|-.+++|+++....++++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 4666788899999999999999999999999997 99999999999999999999986
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
.+.++++++|.++|+|.++...+..++++|.||++.. |++.+++.-.+..+|-.+||..+|.+.+..|.
T Consensus 157 ------~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk 225 (464)
T KOG3764|consen 157 ------NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGK 225 (464)
T ss_pred ------chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCC
Confidence 5778999999999999999999999999999998864 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccc
Q 007405 259 GSAFGALAIAMGISNMLFFIGTPLY 283 (605)
Q Consensus 259 ~~~f~~~~~~~~i~~~~~~~~~~~~ 283 (605)
..+|.+.++++++-..+-++..+.+
T Consensus 226 ~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 226 SAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred cCcHHHHHHHHHHHHHHHHheeCcc
Confidence 9999999998888777766655543
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.70 E-value=5.1e-14 Score=148.03 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHhCCChhH-HHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 88 LSVNMVTFMFYVMHKSFAD-SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
..+++.+|+.+++|++.++ .+.+.+.|..++.++.+++|+++||+ |-|+++.++.+...+..++.+++
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa---------- 112 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLG---------- 112 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH----------
Confidence 3456778999999999999 99999999999999999999999997 99999999999999999999886
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.++..+.+.|++.|++.|+.. +...++..++|+++ |+++.+++..+..+|.++++
T Consensus 113 ------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~ 167 (511)
T TIGR00806 113 ------------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSS 167 (511)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999 99999999999999 99999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHH---HHHHHHHHHHHHHH
Q 007405 247 TLVVYIQMEHGWGSAFGA---LAIAMGISNMLFFI 278 (605)
Q Consensus 247 ~i~~~l~~~~gw~~~f~~---~~~~~~i~~~~~~~ 278 (605)
++++++ ..+||++-+.+ ......+++++.++
T Consensus 168 ~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 168 VLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 999994 46789875544 34444555554444
No 96
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.69 E-value=2.4e-14 Score=155.73 Aligned_cols=408 Identities=13% Similarity=0.089 Sum_probs=243.7
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSV---NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~---~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
|.+.+..|+.++..+++.. .+...+.+.++.+..+.+|+.++......+..|+.+.+.||+ |.|.+.+++.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 5566666666666666542 356677889999999999999999999999999999999997 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHH-HHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
|+++..++ .+.+.+++.. ++.|+|.|.........+...|+++ |
T Consensus 124 g~~lssF~----------------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R 168 (509)
T KOG2504|consen 124 GLLLSSFA----------------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------R 168 (509)
T ss_pred HHHHHHHH----------------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------H
Confidence 99999987 5677777766 6789999999888888888777654 8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhh
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKR 307 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 307 (605)
+.+.++...+..+|..+=|.+..++.+.+|||+.+++.+.+.+-.++.....++...+.++. ...+.-+ .
T Consensus 169 ~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~ 238 (509)
T KOG2504|consen 169 ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------S 238 (509)
T ss_pred HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------c
Confidence 88888888888899999999999999999999999988877755555555554433222221 0000000 0
Q ss_pred ccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCC-cccc---chhhhhhhhhhhhhhhhH
Q 007405 308 HAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPW-KLCT---VTQVEEVKTLVRLVPIPA 383 (605)
Q Consensus 308 ~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~k~~~~~~~~~~ 383 (605)
...++..... .+. ....+...+.. ...................+- +... .+...++..++..+-..+
T Consensus 239 ~~~~~~~~~~--~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~ 309 (509)
T KOG2504|consen 239 AASVESTPKP--VEL------RISERDSGLKK-LSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLF 309 (509)
T ss_pred cccccccccc--ccc------ccccCCCCCCc-ccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHH
Confidence 0000000000 000 00000000000 000000000000000000000 0000 011111111111111111
Q ss_pred HHHHHHHHHhhhhhHHHHH--HhhhccCCCCee--------eC----CCCCCCC--CChhHHHHHHHHHHHHHHHHHHHH
Q 007405 384 CTIMLNVILTEFLTLSVQQ--AYTMNTHMGKLK--------LP----VTCHPRG--ASQLQRVGIGLAVSILSVIWAGIF 447 (605)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------ip----~~~~~~~--~~~~~~i~~G~~~~~~~~~~~~~~ 447 (605)
....+... ...+... ..+++.....+. +. .+...++ +.......+++++.+++.++....
T Consensus 310 ~~~g~~~p----~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 310 AYLGFNVP----FVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHHH----HHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111 1111111 112221111110 00 0112222 233344456666666666555543
Q ss_pred HHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHH
Q 007405 448 ERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASI 527 (605)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~ 527 (605)
.+.+.++...+++|+..+...........+..+.+.-+.+.|+..+++.++..+|+.
T Consensus 386 -----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpP 442 (509)
T KOG2504|consen 386 -----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPP 442 (509)
T ss_pred -----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcc
Confidence 355667777788899888888888889999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007405 528 LNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSA 578 (605)
Q Consensus 528 l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~ 578 (605)
+.+.+.+.++ +|+..|++.++..+++.+++++..
T Consensus 443 iag~~~d~tg-----------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 443 IAGLLYDITG-----------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cceeeeeccC-----------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 9998877665 245667777777777766655544
No 97
>PRK09848 glucuronide transporter; Provisional
Probab=99.68 E-value=1.8e-14 Score=156.30 Aligned_cols=155 Identities=10% Similarity=0.029 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchHHHH-HHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTI-AIFTTIY 146 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~~~~-~~~~~~~ 146 (605)
.+.-.+..+..++.+..+.++++.|+++.+|++..+++.+.....+..++..|+.|+++||. +||||.+ +++.+..
T Consensus 10 ~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~ 89 (448)
T PRK09848 10 IVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPL 89 (448)
T ss_pred HHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHH
Confidence 34444556666777666778888999999999999999999999999999999999999995 4777755 5555545
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.+..+++.... ....+ ......+++..++.+++.+...+...++..++..+.++
T Consensus 90 ~~~~~~~~~~~--~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~----- 143 (448)
T PRK09848 90 MIFSVLVFWVP--TDWSH-------------------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS----- 143 (448)
T ss_pred HHHHHHHHhCc--CCCCc-------------------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----
Confidence 44444332210 00000 02233444455667888888888888887777765432
Q ss_pred hhHHHHHHHH-----HHHHHHHHHHHHHHH
Q 007405 227 LDRFFNFFYL-----SVTVGAIVAFTLVVY 251 (605)
Q Consensus 227 r~~~~~~~~~-----~~~ig~~i~p~i~~~ 251 (605)
|.+..++-.+ ..+++..++|.+.+.
T Consensus 144 r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 144 RARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666555333 244556666666554
No 98
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.68 E-value=3.2e-14 Score=144.71 Aligned_cols=137 Identities=17% Similarity=0.107 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 007405 86 FGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (605)
Q Consensus 86 ~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (605)
......+.+.+++.++++..+++++...+..++.++.++.|++.+|+ |+|+.++.++.++++|..+..-++.
T Consensus 29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~------- 100 (422)
T COG0738 29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS------- 100 (422)
T ss_pred hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh-------
Confidence 34556788899999999999999999999999999999999999997 9999999999999999988864432
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 007405 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (605)
Q Consensus 166 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~ 245 (605)
..++..++++.++.|.|.+......+++++...+++. -..-+++......+|+.++
T Consensus 101 ------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~g 156 (422)
T COG0738 101 ------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILG 156 (422)
T ss_pred ------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHH
Confidence 1578889999999999999999999999999999987 5666777777888999999
Q ss_pred HHHHHHHHh
Q 007405 246 FTLVVYIQM 254 (605)
Q Consensus 246 p~i~~~l~~ 254 (605)
|.+++++..
T Consensus 157 p~~g~~lil 165 (422)
T COG0738 157 PLLGSSLIL 165 (422)
T ss_pred HHHHHHHHH
Confidence 999998876
No 99
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=1.6e-14 Score=157.21 Aligned_cols=172 Identities=9% Similarity=-0.009 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccc-----hHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYWTIAIFTTI 145 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----R~~~~~~~~~~ 145 (605)
...+....+.+.+. +.+...++.++.+++|+++++.+...+...+...+-++ +|+++||+ + ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHH
Confidence 44555577777787 77777889999999999999998888888888887655 99999997 7 77777777655
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
.. ......++.. + .......+.+++.+++.+....+..++..|..+ ++++.
T Consensus 105 ~~-~~~~~~l~~~-----~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~-- 155 (468)
T TIGR00788 105 GS-AILYGLLPGK-----V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSA-- 155 (468)
T ss_pred HH-HHHHHhcccc-----c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCc--
Confidence 42 1112222100 0 123334446788999999999999999999998 44221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (605)
++...++.+.+.++|..+|+.++|++.+..+|+..|++.+++.++..+.
T Consensus 156 -~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~ 204 (468)
T TIGR00788 156 -GPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV 204 (468)
T ss_pred -CCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 4445666777788999999999999999999999999888777666443
No 100
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.67 E-value=1.6e-13 Score=137.57 Aligned_cols=330 Identities=15% Similarity=0.133 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
+..+.++.+=-|..+.++ ..+..-+.+++|+|.+.++.+.++-.+...+..++..+|+.|+ |..+.+..++++.++|.
T Consensus 14 i~gIvlia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~ 91 (395)
T COG2807 14 LAGIVLIAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHH
Confidence 333444444445554333 4567788999999999999999999999999999999999997 99999999999999888
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
++=.. .+...++.+-.+.|.|.+......++++-+-||++. +..
T Consensus 92 ~iR~~-----------------------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~m 135 (395)
T COG2807 92 LIRSL-----------------------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLM 135 (395)
T ss_pred HHHhc-----------------------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhH
Confidence 77665 245678888899999999999999999999999875 888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhcc
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHA 309 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~-gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 309 (605)
+++|..+.++|+.+++.+...+.++. ||+....+.+...++++++++-...+++....+.+.
T Consensus 136 tglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~----------------- 198 (395)
T COG2807 136 TGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATKL----------------- 198 (395)
T ss_pred HhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccccccccccccc-----------------
Confidence 89999999999999999999888877 799999998888887777655432111100000000
Q ss_pred ccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHH
Q 007405 310 AFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN 389 (605)
Q Consensus 310 ~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 389 (605)
.+. .+-|+ +.......+.+-+....+|
T Consensus 199 -~~~--------------------------------------------~~vw~--------~~~aW~vtLfmGlqS~~~Y 225 (395)
T COG2807 199 -VSV--------------------------------------------RKVWR--------SPLAWQVTLFMGLQSLLYY 225 (395)
T ss_pred -ccc--------------------------------------------ccccc--------CchhHHHHHHHHhhHHHHH
Confidence 000 01111 0111111222334455677
Q ss_pred HHHhhhhhHHHHHHhhhccCCC--------------CeeeCC--CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 390 VILTEFLTLSVQQAYTMNTHMG--------------KLKLPV--TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRN 453 (605)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~ip~--~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~ 453 (605)
+.+.+++..+.++.. +.... ++.+|. +|.+++. ........++.++++.+.+..
T Consensus 226 ~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r---~~~~~~~~~~l~G~~G~~~~P----- 295 (395)
T COG2807 226 IVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR---PLVVLALLLMLVGLVGLLLAP----- 295 (395)
T ss_pred HHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc---hHHHHHHHHHHHHHHHHHHhh-----
Confidence 777777776655432 22221 123333 3333222 223334444445554444331
Q ss_pred HhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcch-hHHHHHHHHHHHHhhHHHHHHHHHHHHh
Q 007405 454 YAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPD-AMKSIGSAYAALAGGLGCFAASILNSII 532 (605)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~~~~lg~~l~~~l~~~i 532 (605)
.. ..++| .+++|+|.+.++|....++...+.+ +.-+.-+|+.+..+.+=..+||.+.|.+
T Consensus 296 --------------~~-~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 296 --------------GQ-LPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred --------------hh-HHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 01 22333 4788999999999999999876544 4455667777777777788899999999
Q ss_pred hcccC
Q 007405 533 KSVTG 537 (605)
Q Consensus 533 ~~~~~ 537 (605)
+|.+|
T Consensus 357 hDa~g 361 (395)
T COG2807 357 HDATG 361 (395)
T ss_pred HHhcC
Confidence 99887
No 101
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.66 E-value=2.1e-13 Score=145.22 Aligned_cols=176 Identities=11% Similarity=-0.017 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHH--HHHHHHHHHHhhhHH-HHHhhhccchHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNA--VNNFLGISQASSVLG-GFLADAYLGRYWTIAIFTTIYL 147 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~--~~~~~~~~~~~~~~~-G~laD~~~GR~~~~~~~~~~~~ 147 (605)
...++...+.+.+.+..+.+.+|.|++ +.|.|.++.+.. ..+......+..|+. ++++||+ ||||.+++...+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 445566677777776666777787775 569999999986 455566666666666 6689996 99999766653322
Q ss_pred H-HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 148 A-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 148 ~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
. ....+.... +. . .....++...++.++..+...+...++..|..++++
T Consensus 81 ~~~~~~~~~~~--~~--~--------------------~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------ 130 (390)
T TIGR02718 81 SACLASLALVG--PD--V--------------------AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------ 130 (390)
T ss_pred HHHHHHHHcCC--cc--h--------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------
Confidence 2 222222110 00 0 112233344455566667777777777778777776
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
++...+....+..+|..+|+.+.+++.+..||+..|++.++..++..+..+.
T Consensus 131 ~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 131 LAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777888999999998999999999999999988777665555443
No 102
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=6.1e-16 Score=157.91 Aligned_cols=180 Identities=22% Similarity=0.223 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhcc-chHHH-HHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWT-IAIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-GR~~~-~~~~~~~~~ 147 (605)
-+|.+.+..++..+..|++..|.|.|+.+..|+|..++++..+.|-.+...++++.||+|||++ |||.. -++++++.+
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~ 332 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLIT 332 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999999999999998 76554 445566666
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++.+...++ |+ .+..+..+..+++|+...+++-.+.....|..|++- -
T Consensus 333 ~~~~~~w~~-------~~-------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------a 380 (448)
T COG2271 333 ASLVLYWLA-------PN-------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------A 380 (448)
T ss_pred HHHHHHHcC-------CC-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------c
Confidence 666666554 21 456777888889999999988888888899999988 7
Q ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 228 DRFFNFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 228 ~~~~~~~~~~~~i-g~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
+++.++..++..+ |+.++....+++.|.+||...|++..+.++++.++++...+
T Consensus 381 GtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 381 GTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred cchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 7777777776666 89999999999999999999999888777776665554443
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.66 E-value=1e-13 Score=150.36 Aligned_cols=174 Identities=10% Similarity=0.046 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchH-HHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRY-WTIAIFTTIYLAG 149 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~-~~~~~~~~~~~~~ 149 (605)
-.+..+..++....+..+++.|+++.+|+++..++.+..+..+..++..|+.|+++||. +||| +.++++.+...+.
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVV 93 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHH
Confidence 33444555666666778899999999999999999999999999999999999999993 3875 4555666666666
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~r~ 228 (605)
.+++... |..... .....+++..++.+++..+......++.+|+.++ ++ |.
T Consensus 94 ~~l~f~~---p~~~~~-------------------~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e------R~ 145 (444)
T PRK09669 94 CLLTFYT---PDFGAT-------------------GKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE------RH 145 (444)
T ss_pred HHHHHhC---CCCCcc-------------------hHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH------HH
Confidence 5554432 111000 3455555655666777777777788999998854 44 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-------hhchHHHHHHHHHHHHHHHHH
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~-------~~gw~~~f~~~~~~~~i~~~~ 275 (605)
+..++.....++|..+++.+...+.. ..||+..+.+.+++.++..++
T Consensus 146 ~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 146 SLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888777778887777665443332 246777777666665544443
No 104
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.66 E-value=2.9e-14 Score=142.10 Aligned_cols=163 Identities=12% Similarity=-0.000 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (605)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~ 158 (605)
..+-...-.....+.+-+....|.+..+..++......+..++....|.++|++ |||+.+.+......+.-++...+
T Consensus 87 wmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s-- 163 (528)
T KOG0253|consen 87 WMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS-- 163 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC--
Confidence 333333333445555566777888888999999999999999999999999997 99999888777665555555543
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHH
Q 007405 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (605)
Q Consensus 159 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~ 238 (605)
.|+..+++.|.+.|+|.|+ .|...++-.|..|..+ |..-.-+. ...
T Consensus 164 --------------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~w 209 (528)
T KOG0253|consen 164 --------------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFW 209 (528)
T ss_pred --------------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHH
Confidence 5778899999999999999 8999999999999988 77766655 667
Q ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 239 ~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
.+|.++...+.-.+..+.||||..........+.....++
T Consensus 210 aig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w 249 (528)
T KOG0253|consen 210 AIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVW 249 (528)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhh
Confidence 8888888888777778889999877766544444433333
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.65 E-value=3.7e-14 Score=154.93 Aligned_cols=172 Identities=10% Similarity=0.001 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhh----hccch-HHHHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGR-YWTIAIFTTIYLAG 149 (605)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~GR-~~~~~~~~~~~~~~ 149 (605)
.+..+...+....+..+++.|+++.+|+++..++.+..+..+.-++..|+.|+++| |+ || |+.++++.+...++
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVV 90 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHH
Confidence 34455566666677888999999999999999999999999999999999999999 54 98 55666677777766
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC-CCCchhhhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~-~~~~~~~~~r~ 228 (605)
..++... |.. + +......+++..++.+++.........++.+|+.+ +++ |.
T Consensus 91 ~~llf~~---p~~-~------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~ 142 (473)
T PRK10429 91 LFLLFSA---HLF-E------------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------RE 142 (473)
T ss_pred HHHHHcC---CCC-C------------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HH
Confidence 6555432 100 0 00234445555566778888888888999999985 555 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-------hchHHHHHHHHHHHHHHHHH
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQME-------HGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~-------~gw~~~f~~~~~~~~i~~~~ 275 (605)
+..++-....++|+.+.+.+...+... .+|++...+.+++.++..+.
T Consensus 143 ~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 143 QLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 888886666677766665554433221 24565555555544444333
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.64 E-value=2.1e-13 Score=144.72 Aligned_cols=376 Identities=15% Similarity=0.111 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~ 151 (605)
..+....++....+-...++++.|+++ .|+|..|.|.+.+...+...+.+++.|+++||+..+||.+.+..++..+...
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~ 83 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALL 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHH
Confidence 345555666666666667889999975 6799999999999999999999999999999974567777776666555444
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHH
Q 007405 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (605)
Q Consensus 152 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~ 231 (605)
..... .+.+.+++..++..+......|...++.-+...++..+ =||-|..
T Consensus 84 ~~~~~----------------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~~--YG~iRlw 133 (400)
T PF03825_consen 84 LLAFS----------------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRGKD--YGRIRLW 133 (400)
T ss_pred HHHHh----------------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccCC--CCcchhh
Confidence 44332 34566666667778887777788887777666533211 1244444
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhhc---hHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhh
Q 007405 232 NFFYLSVTVGAIVAFTL-VVYIQMEHG---WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKR 307 (605)
Q Consensus 232 ~~~~~~~~ig~~i~p~i-~~~l~~~~g---w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 307 (605)
|- +|-+++... ++++....+ ..+.+++.+...++... +.+..++.+.++..++...+
T Consensus 134 GS------iGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~-~~l~lp~~~~~~~~~~~~~~------------ 194 (400)
T PF03825_consen 134 GS------IGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAG-FALFLPKTPPKRSAKESVKK------------ 194 (400)
T ss_pred hh------HHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHH-HHHhCCCCccccccCCCccc------------
Confidence 33 333333221 222222222 23345544433322221 12222222110000000000
Q ss_pred ccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHH
Q 007405 308 HAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIM 387 (605)
Q Consensus 308 ~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 387 (605)
. ...+. +++ .++++..+.++..++....
T Consensus 195 ------------------------------~---~~~~~--------------~~l-----lk~~~~~~Fll~~~l~~~~ 222 (400)
T PF03825_consen 195 ------------------------------L---LGLDA--------------LKL-----LKNPRFLVFLLAAFLIGIS 222 (400)
T ss_pred ------------------------------c---cchHH--------------HHH-----hcCccHHHHHHHHHHHHHH
Confidence 0 00000 000 0011111111111111111
Q ss_pred HHHHHhhhhhHHHHHHhhhccCCCC--e------eeCC----CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 388 LNVILTEFLTLSVQQAYTMNTHMGK--L------KLPV----TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYA 455 (605)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~--~------~ip~----~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 455 (605)
. ..+....+.+.+...+.+....+ + .+|. ++..+|++..+.+.++++..++=..+++....
T Consensus 223 ~-~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~------ 295 (400)
T PF03825_consen 223 H-AAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD------ 295 (400)
T ss_pred H-HHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 1 11122222222221111111101 0 1222 55566777777777777665555555554310
Q ss_pred hhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHH-HhhHHHHHHHHHHHHhhc
Q 007405 456 ISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAAL-AGGLGCFAASILNSIIKS 534 (605)
Q Consensus 456 ~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~lg~~l~~~l~~~i~~ 534 (605)
+.+ .....+....++.|+..++...+...++.+.+|++.|++++++++. ..++|..+|..+.|.+.+
T Consensus 296 -----------~~~-~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~ 363 (400)
T PF03825_consen 296 -----------PWP-FIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYD 363 (400)
T ss_pred -----------CcH-HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 000 0111122334568999999999999999999999999999999886 578999999999999887
Q ss_pred ccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 535 VTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 580 (605)
Q Consensus 535 ~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 580 (605)
..| ..... .+..++.+.+++.++..++++++.|+
T Consensus 364 ~~g--~~~~~----------~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 364 AFG--ARGMF----------DWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred Hhc--chhhh----------hHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 544 11111 12345666677777777777776543
No 107
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.62 E-value=1.1e-14 Score=149.44 Aligned_cols=142 Identities=16% Similarity=0.172 Sum_probs=105.5
Q ss_pred CChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCC
Q 007405 102 KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEP 181 (605)
Q Consensus 102 ~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 181 (605)
.++...+.+..+..++.++++++.||++|++ |||+++...+++.++++++++++. |.+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~---------------------~~~ 138 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSV---------------------GTT 138 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCC---------------------CCC
Confidence 5566778888889999999999999999997 999999999999999999776641 111
Q ss_pred ccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHH----HHHHHHHHHHHHHHHHHhh--
Q 007405 182 AKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL----SVTVGAIVAFTLVVYIQME-- 255 (605)
Q Consensus 182 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~----~~~ig~~i~p~i~~~l~~~-- 255 (605)
+...-+.++...|+++|+|.|+-+|+..+..+|....+. |+...+.... +...|+.++-++..-....
T Consensus 139 ~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~ 212 (538)
T KOG0252|consen 139 SPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFN 212 (538)
T ss_pred CCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCC
Confidence 221356788899999999999999999999999999888 8887776333 3344444444333322111
Q ss_pred ---------hchHHHHHHHHHHHHH
Q 007405 256 ---------HGWGSAFGALAIAMGI 271 (605)
Q Consensus 256 ---------~gw~~~f~~~~~~~~i 271 (605)
.=||..|.+.++..++
T Consensus 213 ~~~~~~~ld~vWRl~~glg~vpa~~ 237 (538)
T KOG0252|consen 213 GPSTYPHLDGVWRIIFGLGAVPALL 237 (538)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHH
Confidence 1289888776665443
No 108
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.61 E-value=3e-14 Score=156.39 Aligned_cols=180 Identities=12% Similarity=0.031 Sum_probs=133.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
++|+.....+...++....+|++..++|.|+++.+|++..++.+......++..++.+++|+++||+ |||+++.++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~ 325 (490)
T PRK10642 247 KHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVA 325 (490)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 3555555555555666788889999999999999999988888888888888999999999999997 999998888765
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+.+..... . .+...+++++++.|++.++..+....+..|.+|++.
T Consensus 326 ~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~----- 375 (490)
T PRK10642 326 LFVLAIPAFILIN-----S--------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI----- 375 (490)
T ss_pred HHHHHHHHHHHHh-----C--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-----
Confidence 4444333222100 0 245567778888888777777778888899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~ 277 (605)
|++++++.+....+++.++|.+.+++.+..+ |+.++++..+..++.++..+
T Consensus 376 -Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 427 (490)
T PRK10642 376 -RYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV 427 (490)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 9999998555566677899999999887654 67666655555544444433
No 109
>PTZ00207 hypothetical protein; Provisional
Probab=99.61 E-value=5.3e-12 Score=138.76 Aligned_cols=178 Identities=9% Similarity=0.001 Sum_probs=130.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
.++|..+...+.+..+.... |++.. ....+++++|++..+.+++.++... ..++.++.|+++||+ |||++++++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~-y~fsv-~s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFM-YAFNL-ISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 45666555555555444333 44443 4557899999999999988876443 345667789999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
++.++.++++++... ... .+.+.+++.|++.|+|.+...+.....+.++|| ++
T Consensus 100 l~~iG~ll~ala~~~--~i~--------------------~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~---- 152 (591)
T PTZ00207 100 VFCLGTLLFALTFQE--VIE--------------------GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN---- 152 (591)
T ss_pred HHHHHHHHHHHHhcc--ccc--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh----
Confidence 999999998885220 000 367889999999999999888888888999997 56
Q ss_pred hhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 007405 225 THLDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i-~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (605)
|+...++...+..+|+.+ +++..+++. .+|+..|++.+++.++..++.+
T Consensus 153 --RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 153 --RGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999975 555555554 3577777776666554444433
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.60 E-value=4.7e-14 Score=147.46 Aligned_cols=376 Identities=10% Similarity=0.003 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
..+......++..+++....++.+.+++++.|++.++.|.+.++..+...+.+|+.|.++||+ |.||-++....+..+.
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHH
Confidence 466666666776677666788999999999999999999999999999999999999999997 9666554443332221
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhH-HHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM-LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~-~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
......-...|.+. .|. ...+++-+..++...+..|...++..+.. |.
T Consensus 87 ~~pff~~v~~pll~---------------------~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s----------r~ 135 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQ---------------------SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS----------RR 135 (412)
T ss_dssp CHHHHHHTHHHHHH---------------------TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH----------HH
T ss_pred HHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH----------HH
Confidence 11111110111111 121 11112112223333333444444433222 22
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHh
Q 007405 229 RFFN--FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (605)
Q Consensus 229 ~~~~--~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 306 (605)
..+- -......+|.+++..++|++.+ .+-...||+.....++..++.+..++...+..+..+
T Consensus 136 ~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~--------------- 199 (412)
T PF01306_consen 136 NGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD--------------- 199 (412)
T ss_dssp HSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST---------------
T ss_pred hcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc---------------
Confidence 2222 2333567888889999998886 355678887665544444433333222111100000
Q ss_pred hccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHH
Q 007405 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTI 386 (605)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 386 (605)
.. .+ ..+..+..|. .++-..|+++....+.....
T Consensus 200 ---------------~~-~~----------~~~~~~~~~~--------------------~~l~k~~~fw~~~l~v~g~~ 233 (412)
T PF01306_consen 200 ---------------AL-GA----------KKDKVSLKDV--------------------LSLFKMRNFWFFVLFVIGVA 233 (412)
T ss_dssp ---------------TS-SS----------------HHHH--------------------HHHTTSHHHHHHHHHHHHHH
T ss_pred ---------------cc-cc----------CCCCCcHHHH--------------------HHHhcchhHHHHHHHHHHHH
Confidence 00 00 0000000000 00001123333333333333
Q ss_pred HHHHHHhhhhhHHHHHH---hhhccCCCC----ee----eC----CCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 387 MLNVILTEFLTLSVQQA---YTMNTHMGK----LK----LP----VTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYR 451 (605)
Q Consensus 387 ~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~----ip----~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~ 451 (605)
..|..+.|+...|.... ...+....| .+ ++ ..+..+|++.+..+.++.+++++=....++.
T Consensus 234 ~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~---- 309 (412)
T PF01306_consen 234 AIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA---- 309 (412)
T ss_dssp HHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-----
T ss_pred HHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh----
Confidence 44555554444332210 000111101 00 00 0233445556654444444444443333332
Q ss_pred HHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHH-HHHhhHHHHHHHHHHH
Q 007405 452 RNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYA-ALAGGLGCFAASILNS 530 (605)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~lg~~l~~~l~~ 530 (605)
.+++++++.-.+-++-..+...+..-|+.+.+|++..++...+. ++..++|..+.+.+.|
T Consensus 310 -------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G 370 (412)
T PF01306_consen 310 -------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAG 370 (412)
T ss_dssp --------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred -------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 46778888888999999999999999999999999999888885 6899999999999999
Q ss_pred HhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 531 IIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 580 (605)
Q Consensus 531 ~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 580 (605)
.+.+..| ++..|++++.+.++..++.++..++
T Consensus 371 ~lyd~~G------------------~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 371 YLYDRIG------------------FQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hhHhhcC------------------cHHHHHHHHHHHHHHHHHheeeecC
Confidence 9888544 5568998888877777776666543
No 111
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.60 E-value=7.9e-14 Score=150.44 Aligned_cols=346 Identities=13% Similarity=0.074 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhh----hccchHHHHH-HHHHHHHHHHHHH
Q 007405 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGRYWTIA-IFTTIYLAGLTGI 153 (605)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~GR~~~~~-~~~~~~~~~~~~~ 153 (605)
+...+.......+++.|+++.+|+++..++.+..+..+..++..|+.|+++| |+ ||||.++ ++.++..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4445555556678899999999999999999999999999999999999999 65 9666555 6777777777776
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
.... | .+.........+.+..++..++.........++.+|..++.++ |.+..++
T Consensus 90 f~~~------p--------------~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~ 144 (428)
T PF13347_consen 90 FSPP------P--------------AGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSW 144 (428)
T ss_pred hccc------c--------------chhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHH
Confidence 6420 0 0000002334456666677899999999999999999986432 8888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-------hchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHh
Q 007405 234 FYLSVTVGAIVAFTLVVYIQME-------HGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRK 306 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~-------~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 306 (605)
-.....+|..+...+.+.+.+. .+|++..++.+++.++..++.....++.+...++.++...
T Consensus 145 ~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~----------- 213 (428)
T PF13347_consen 145 RMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKIS----------- 213 (428)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccc-----------
Confidence 7777777776555555544322 1588888877777766666655554441111110000000
Q ss_pred hccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHH
Q 007405 307 RHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTI 386 (605)
Q Consensus 307 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 386 (605)
+ ++ .++... ++ |.+...+...+...
T Consensus 214 ------------~---------~~-----------------------------~~~~~~----~n-r~~~~l~~~~~~~~ 238 (428)
T PF13347_consen 214 ------------L---------RD-----------------------------SLRSLF----RN-RPFRILLLAFFLQW 238 (428)
T ss_pred ------------c---------cc-----------------------------chhhhc----cc-chHHHHHHHHHHHH
Confidence 0 00 000000 00 11111111111111
Q ss_pred HHHHHHhhhhhHHHHHHhhhccCCCCe----e------eCC-CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 387 MLNVILTEFLTLSVQQAYTMNTHMGKL----K------LPV-TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYA 455 (605)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------ip~-~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~ 455 (605)
+.+........++.....+.+...+.+ . .|. .+..+|.+.++.+..+.++.+++.+++.+..
T Consensus 239 ~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~------- 311 (428)
T PF13347_consen 239 LAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG------- 311 (428)
T ss_pred hhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH-------
Confidence 111111111122222222222111100 0 111 3333444555556778777777777766652
Q ss_pred hhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcch-------hHHHHHHHHHHHHhhHHHHHHHHH
Q 007405 456 ISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPD-------AMKSIGSAYAALAGGLGCFAASIL 528 (605)
Q Consensus 456 ~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~g~~~~~~~lg~~l~~~l 528 (605)
+ .+.+++.+..++.|++.+..++...++..+..+. +..|...|++++...++..++..+
T Consensus 312 -------------~-~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 312 -------------P-GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred -------------h-hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 1 2567788888899999999999989888887763 456999999999999999999999
Q ss_pred HHHhhcccC
Q 007405 529 NSIIKSVTG 537 (605)
Q Consensus 529 ~~~i~~~~~ 537 (605)
.+.+....|
T Consensus 378 ~g~~l~~~G 386 (428)
T PF13347_consen 378 VGLLLALVG 386 (428)
T ss_pred HHHHHHHhC
Confidence 998877554
No 112
>PRK11462 putative transporter; Provisional
Probab=99.59 E-value=2.5e-12 Score=139.91 Aligned_cols=178 Identities=11% Similarity=0.060 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchHHHHH-HHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIA-IFTTIYLAG 149 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~~~~~-~~~~~~~~~ 149 (605)
-.+..+..++.+..+..++..|+++.+|+++..++.+..+.-+.-++.-|+.|+++||. +||||..+ ++.+...++
T Consensus 14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~ 93 (460)
T PRK11462 14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIV 93 (460)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHH
Confidence 33455555666666778899999999999999999999999999999999999999973 58765554 566777777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+++... |...+. .....+++.-++..++.........++.+|+.++.++ |.+
T Consensus 94 ~~llf~~---p~~s~~-------------------~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~ 146 (460)
T PRK11462 94 CVLAYST---PDLSMN-------------------GKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RIS 146 (460)
T ss_pred HHHHHhC---CCCCcc-------------------hHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHH
Confidence 6665542 111010 2244455555667888888888888999999875432 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-------chHHHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEH-------GWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~-------gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
..++...+.++|..+++.+...+.... +|+....+.+++.++..++.+.
T Consensus 147 l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 147 LQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 999988888888888877765544332 4666555555554444433333
No 113
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.58 E-value=9.1e-14 Score=156.24 Aligned_cols=208 Identities=14% Similarity=0.094 Sum_probs=155.7
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~ 143 (605)
+..+++.++..+....+......++.....+.+.++++++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ 105 (633)
T TIGR00805 27 LFSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGC 105 (633)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecH
Confidence 345566554555545555555556777777888999999999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHhhhccc--------------cCCCCCcccccc-----cc--cCCCCCcc--chhHHHHHHHHHHHHHh
Q 007405 144 TIYLAGLTGITLCATMKV--------------FMPNQDNCDRIS-----QL--LGSCEPAK--SWQMLYLYTVLYITGFG 200 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~c~~~~-----~~--~~~~~~~~--~~~~~~~~~~~~l~g~g 200 (605)
+++.+|.+++++...... .....+.|...+ +. ...|.... ...+..++++|+++|+|
T Consensus 106 ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG 185 (633)
T TIGR00805 106 AIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG 185 (633)
T ss_pred HHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc
Confidence 999999999887632110 000122342110 00 01233222 12456788999999999
Q ss_pred hcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------------ch
Q 007405 201 AAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH----------------------GW 258 (605)
Q Consensus 201 ~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~----------------------gw 258 (605)
.+...+...+++.|.+|+++ |+..+++++.+..+|..+|+++++++.+.+ +|
T Consensus 186 ~~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaW 259 (633)
T TIGR00805 186 ATPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAW 259 (633)
T ss_pred CCcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHH
Confidence 99999999999999999999 999999999999999999999999887532 27
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007405 259 GSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 259 ~~~f~~~~~~~~i~~~~~~~ 278 (605)
+..|++.+++.++..+.++.
T Consensus 260 wl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 260 WIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 77888877776665544443
No 114
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.54 E-value=3.4e-12 Score=137.73 Aligned_cols=149 Identities=12% Similarity=0.065 Sum_probs=124.0
Q ss_pred HHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccC
Q 007405 98 YVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG 177 (605)
Q Consensus 98 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 177 (605)
++++....+.+.+.++|.++++++.+++|.|.||+ .-.+.+..+.++..+..++....
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~--------------------- 131 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV--------------------- 131 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 56778888899999999999999999999999997 86666666655555444343332
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH----
Q 007405 178 SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ---- 253 (605)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~---- 253 (605)
.+.+.+++.|++.|+..++.+|+...+++.+|.+++ |+.-+++++.+..+|.++|.+++..+.
T Consensus 132 -------~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 132 -------HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred -------hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 578999999999999999999999999999999999 999999999999999999999988763
Q ss_pred --hhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 254 --MEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 254 --~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
...||||.|.+.+++.++..++.++..+
T Consensus 199 ~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 199 SGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred CCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 3468999999999887666655444443
No 115
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=9.6e-13 Score=143.63 Aligned_cols=176 Identities=16% Similarity=0.083 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.+|...+..++....++++..++|.|+++.+|++..++++....+.++..++.+++|+++||+ |||+.+.+...+..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHH
Confidence 477777888888888888889999999999999999999999999999999999999999997 9988776655444433
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
...+.+... .+.....+.+++.|++..+..........|.+|++. |++
T Consensus 338 ~~~~~~~~~--------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~ 385 (467)
T PRK09556 338 FTLGVYQHA--------------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGV 385 (467)
T ss_pred HHHHHHHhc--------------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHH
Confidence 322222100 234445566677776544444344466779999998 999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHh------------hhchHHHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTV-GAIVAFTLVVYIQM------------EHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 230 ~~~~~~~~~~i-g~~i~p~i~~~l~~------------~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
+.++.+...++ |+.++|.+.|++.+ ..+|+..|++..++.+++.+..+.
T Consensus 386 a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 386 ANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999988886 77999999999999 578999999887777776555443
No 116
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=3.3e-12 Score=136.21 Aligned_cols=172 Identities=11% Similarity=0.090 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+..+...++....++....+++.|+++++|++..+++.+.+...++..++.+++|+++||+ |||+.+.++.+...+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~ 296 (393)
T PRK15011 218 TLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFY 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 33344444444455555667899999999999999999888887788888899999999997 99998887766555443
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
...... .+...+++.+++.+++.|...+....+..|.+|+ + |+++
T Consensus 297 ~~~~~~----------------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~ 341 (393)
T PRK15011 297 AGMLMA----------------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSA 341 (393)
T ss_pred HHHHHH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchH
Confidence 333222 2445566677777777776666677778888874 4 7889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
.++++...++|..++|.++|++.+..||+..|++.+++.+++++..+.
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999888889999999999999999899999998877777666655443
No 117
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.47 E-value=1.8e-10 Score=124.86 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCc
Q 007405 473 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNIN 552 (605)
Q Consensus 473 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~ 552 (605)
.+.+.+.-++.|+..+-..+..-++..+..|++..+...|++.+.....+++||.+.+.+.+.++
T Consensus 380 ~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg--------------- 444 (477)
T PF11700_consen 380 PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG--------------- 444 (477)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence 34444455678899999999999999999999999999999999999999999999999998776
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHH
Q 007405 553 TGRFDYLYWLLAVLSVINFCAFLY 576 (605)
Q Consensus 553 ~~~~~~~f~~~a~l~~v~~~~~~~ 576 (605)
+.++.+..+.++.++++++.+.
T Consensus 445 --~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 445 --SQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred --CchhHHHHHHHHHHHHHHHHhh
Confidence 1235567777777777766643
No 118
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.43 E-value=6.6e-12 Score=142.08 Aligned_cols=132 Identities=9% Similarity=0.009 Sum_probs=107.3
Q ss_pred HHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHH
Q 007405 111 VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYL 190 (605)
Q Consensus 111 ~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 190 (605)
..+..++..++.+++|+++||+ |||++++++.++..++.+++++. .+...+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~----------------------------~s~~~l 651 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG----------------------------NSESAM 651 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH----------------------------ccHHHH
Confidence 4455678889999999999997 99999999999888888777765 234456
Q ss_pred HHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q 007405 191 YTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMG 270 (605)
Q Consensus 191 ~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~ 270 (605)
++.+++.+++.++..+...++++|++|++. |++++++.+....+|+++||.+++++.+. +...+|++.+++.+
T Consensus 652 l~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~ll 724 (742)
T TIGR01299 652 IALLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALA 724 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHH
Confidence 666777788888888899999999999999 99999999999999999999999988764 45667777776666
Q ss_pred HHHHHHHH
Q 007405 271 ISNMLFFI 278 (605)
Q Consensus 271 i~~~~~~~ 278 (605)
++.++.++
T Consensus 725 l~~ll~~~ 732 (742)
T TIGR01299 725 CGGLLALK 732 (742)
T ss_pred HHHHHHHh
Confidence 65555443
No 119
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=1.2e-11 Score=133.90 Aligned_cols=183 Identities=13% Similarity=-0.010 Sum_probs=133.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
++++.........++....+|.+.++++.|+++.+|.+......+.........++.++.|+++||+ |||+++.++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~ 325 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALI 325 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 3444444445566677778888999999999999999987666555566677788889999999997 999998888766
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+.+..... .. .....+++..++.+++.+...+...++.+|.+|++.
T Consensus 326 ~~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~----- 376 (438)
T PRK09952 326 GTLSAFPFFMALE-----AQ-------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY----- 376 (438)
T ss_pred HHHHHHHHHHHHH-----cC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch-----
Confidence 5554433332210 00 123344445566678888878888999999999988
Q ss_pred hhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhh--chHHHHHHHHHHHHHHHHHHHHh
Q 007405 226 HLDRFFNFFYL-SVTVGAIVAFTLVVYIQMEH--GWGSAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 226 ~r~~~~~~~~~-~~~ig~~i~p~i~~~l~~~~--gw~~~f~~~~~~~~i~~~~~~~~ 279 (605)
|+++.++.+. +..+|+.++|.+.+++.+.. +|...+.+.+++.+++.+..+..
T Consensus 377 -r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 377 -RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred -hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 9999998544 56689999999999998754 48888877777777666665443
No 120
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.41 E-value=5.6e-12 Score=137.01 Aligned_cols=177 Identities=17% Similarity=0.144 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhcc-chHHHH-HHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWTI-AIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-GR~~~~-~~~~~~~~ 147 (605)
.+|...+..++.....+++..++|.|+++..|++..+++.....+.++..++.+++|+++||+. |||+.. .....+..
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~ 333 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVT 333 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHH
Confidence 4666777777777777888899999999999999999998888888899999999999999961 344332 22223333
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++.+...+. +. .+....++..++.|.+..+.......+..|.+|++. |
T Consensus 334 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~ 381 (452)
T PRK11273 334 IATIVYWLN-------PA-------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------A 381 (452)
T ss_pred HHHHHHHHh-------cc-------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------h
Confidence 333222221 00 133333444455555443333334456779999998 9
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 228 DRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i-~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
++++++.+...++|+.+ +|.+.+++.+..||++.|++.++..+++++....
T Consensus 382 g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 382 GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888655 7999999999999999999887776666555443
No 121
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=1.6e-11 Score=130.96 Aligned_cols=173 Identities=14% Similarity=0.150 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++...+..++.....+++..++|.|+++.+|++..+++...+.+.++..++.+++|+++||+ |||+++.....+..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 355555666666677778889999999999999999999999999999999999999999997 9999888777665555
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
..+.... .+...+.+..++.|++.++..+...++..|..|.+ +++
T Consensus 285 ~~~~~~~----------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~ 329 (394)
T PRK03699 285 MYLFVNT----------------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPK 329 (394)
T ss_pred HHHHHHc----------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHH
Confidence 4444332 23344455567788888877788788888877643 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
..++.....++|..++|.+.|++.+..|++..+++.+++.+++.++...
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 6677777888999999999999999999999988877766666544333
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.40 E-value=3.2e-12 Score=135.18 Aligned_cols=172 Identities=14% Similarity=0.041 Sum_probs=132.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
+++.++......++....++.+..+++.|+++++|.+..+.+.......++..++.+++|+++||+ |||+.+.++..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~ 295 (394)
T TIGR00883 217 HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLA 295 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 334466667777777788888888999999999999999999999999999999999999999997 9999887655444
Q ss_pred HHHH-HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 147 LAGL-TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 147 ~~~~-~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
.+.. ....... .. .+...+++..++.|++.+...+...+++.|.+|++.
T Consensus 296 ~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~----- 345 (394)
T TIGR00883 296 ALLAVPLLMALL------DS-------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV----- 345 (394)
T ss_pred HHHHHHHHHHHh------cC-------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc-----
Confidence 3332 1211110 00 234555666778888888888999999999999998
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHH
Q 007405 226 HLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMG 270 (605)
Q Consensus 226 ~r~~~~~~-~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~ 270 (605)
|++++++ +..+..+|..++|.+++++.+..| |++.++...+..+
T Consensus 346 -~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 346 -RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred -eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 8888887 455667899999999999999888 8877666555443
No 123
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.40 E-value=1.1e-09 Score=113.02 Aligned_cols=368 Identities=12% Similarity=0.039 Sum_probs=197.6
Q ss_pred HHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccc-----hHH-HHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 007405 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYW-TIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (605)
Q Consensus 96 l~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----R~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 169 (605)
+..+++++..-.+..+....+... ..+..|+.||+. + ||. -+..+.++...+..+...+........
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~----- 78 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESG----- 78 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccc-----
Confidence 346788888877877777655544 688899999997 6 444 444566777766666655432111000
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 007405 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (605)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~ 249 (605)
..-+.+.........++..+.|+|.+....+..++.+|..|+++ |++..++.+...-+|..++..+.
T Consensus 79 -------~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 79 -------QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred -------cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHH
Confidence 00011111122334445567899999999999999999999999 99999999999999999999999
Q ss_pred HHHHhhhch-HHHHHHHHHH---HHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCccccccccccCCC
Q 007405 250 VYIQMEHGW-GSAFGALAIA---MGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGK 325 (605)
Q Consensus 250 ~~l~~~~gw-~~~f~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~ 325 (605)
+.+.+.++- |..-.+..+. .++.++ ..+.. |.+..+....
T Consensus 146 g~lL~~~s~~rL~~v~~~~a~i~~~l~~i-a~wg~-E~r~~~~~~~---------------------------------- 189 (403)
T PF03209_consen 146 GRLLDPFSPERLIQVIQGVALIALLLNLI-ALWGQ-EPRRSRRAAA---------------------------------- 189 (403)
T ss_pred HHHccccCHHHHHHHHHHHHHHHHHHHHH-HHHhc-ccCCcccccC----------------------------------
Confidence 988877652 3222222221 122211 12211 1111110000
Q ss_pred cccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhh
Q 007405 326 HSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYT 405 (605)
Q Consensus 326 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (605)
.++++..+.+....... + .+.+++. ..+++....++.- ......|--+..+
T Consensus 190 ----------~~~~~~~f~~a~~~~~~--------------~--~~a~~f~--~fl~l~t~a~~~Q-D~iLEPygg~Vfg 240 (403)
T PF03209_consen 190 ----------AERPRPPFREAWRQVWA--------------S--PQARRFF--VFLFLGTLAFFMQ-DVILEPYGGEVFG 240 (403)
T ss_pred ----------CCCCCccHHHHHHHHHh--------------C--CChhHHH--HHHHHHHHHHHhh-HHHcCCchhHHcC
Confidence 00000011111000000 0 0111111 1111111111110 0000000001111
Q ss_pred hccCC--------C-----CeeeCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcch
Q 007405 406 MNTHM--------G-----KLKLPVTCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLS 472 (605)
Q Consensus 406 ~~~~~--------~-----~~~ip~~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 472 (605)
|+... + ++.+-.....++.++.+...+|....++++........ . .+
T Consensus 241 msv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~-------------------~-~~ 300 (403)
T PF03209_consen 241 MSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP-------------------L-GS 300 (403)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh-------------------c-cc
Confidence 11000 0 00000000112223333344566655666555443321 1 35
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCc
Q 007405 473 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNIN 552 (605)
Q Consensus 473 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~ 552 (605)
.+.+.+..+++|++.++......+...+.++++..|..+|.|...+.++..++..+.+.+.+... .+..++ .
T Consensus 301 ~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~-------~~~~~~-~ 372 (403)
T PF03209_consen 301 PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVR-------ALFGNS-P 372 (403)
T ss_pred chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhccCC-c
Confidence 67788899999999999999999999999999999999999999999999999999998876433 111110 1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHH
Q 007405 553 TGRFDYLYWLLAVLSVINFCAFLY 576 (605)
Q Consensus 553 ~~~~~~~f~~~a~l~~v~~~~~~~ 576 (605)
...|..+|.+=+++.++++++...
T Consensus 373 ~~aY~~VF~lEa~ll~~a~~ll~~ 396 (403)
T PF03209_consen 373 ALAYGVVFALEAVLLLAALVLLGR 396 (403)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 123455566555555555554433
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.40 E-value=2.3e-11 Score=129.75 Aligned_cols=167 Identities=13% Similarity=0.060 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (605)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~ 158 (605)
++..++++.+..+++.|+.+ .|+ .+.+...+.+.++..++.++.|+++||+ |||+.+.++.++..++.+.....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~-- 299 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA-- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh--
Confidence 34455566667788888754 465 3445666778888889999999999997 99999988888777777666553
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHH
Q 007405 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (605)
Q Consensus 159 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~ 238 (605)
.+...+++++++.|++.+...+.......|.+|++. |++..++++...
T Consensus 300 --------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 347 (399)
T PRK05122 300 --------------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFL 347 (399)
T ss_pred --------------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHH
Confidence 345556677888999999888888888889999888 999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccc
Q 007405 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLY 283 (605)
Q Consensus 239 ~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 283 (605)
++|..++|.+.|++.+..||++.|++.+++.+++++......++.
T Consensus 348 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 348 DLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999988887777766655544433
No 125
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=1.8e-11 Score=127.03 Aligned_cols=171 Identities=20% Similarity=0.233 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHH-HHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-TIAIFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~-~~~~~~~~~~~~ 149 (605)
.+......++..........+.+.|+.+.+|.+..+.+.......++..++.++.|+++||+ |||+ .+.++.++..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHH
Confidence 44455555666666667778888898888899999999999999999999999999999997 9999 999999988888
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+..... .+...+++..++.|++.+...+...++..|.+|+++ |++
T Consensus 256 ~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 301 (352)
T cd06174 256 LLLLALA----------------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGT 301 (352)
T ss_pred HHHHHHh----------------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHH
Confidence 8877764 346677788899999999999999999999999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
.+++.+...++|..++|.+.+++.+..+|++.|++.+++.+++.+..
T Consensus 302 ~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 302 ASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998999999999888877766554
No 126
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.39 E-value=1.8e-10 Score=121.99 Aligned_cols=350 Identities=12% Similarity=0.094 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchHH-HHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIY 146 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~~-~~~~~~~~~ 146 (605)
-+.-....+..+..+-.+..++..|.++.+|+++..++.+..+.-+.-++.-|+.|.++||. +||+| -++.+.+.+
T Consensus 14 ki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 14 KIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 34444555666667667788999999999999999999999999999999999999999985 58655 455666778
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.+..+++..+.. ...+ .+....++.-++.+++...+.....++.+++.++.++
T Consensus 94 ~i~~~l~F~~p~---~~~~-------------------~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E----- 146 (467)
T COG2211 94 AIVAVLLFITPD---FSMT-------------------GKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE----- 146 (467)
T ss_pred HHHHHHHHcCCC---cccC-------------------cchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----
Confidence 888777776521 0000 3445555666788999999998899999999876432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh-------hhchHHHHHHHHHHHHHHHHHHHHhcccccc-cCCCCC-chhHHH
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFIGTPLYRH-RLPGGS-PLTRVA 297 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~-------~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-~~~~~~ 297 (605)
|.+..++-....++|..+...+...+.. ..||+....+.+++..+..+..+...+|... ..+.++ ......
T Consensus 147 R~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~ 226 (467)
T COG2211 147 RASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLK 226 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHH
Confidence 9999999888888887766555544433 2456666666555555555444443333211 111100 000000
Q ss_pred HHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchhhhhhhhhhh
Q 007405 298 QVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVR 377 (605)
Q Consensus 298 ~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 377 (605)
..+....+ .|.++.
T Consensus 227 ~~~~~~~~------------------------------------------------------------------Nrp~~~ 240 (467)
T COG2211 227 DSFLLIFK------------------------------------------------------------------NRPLLL 240 (467)
T ss_pred HHHHHHHc------------------------------------------------------------------cchHHH
Confidence 00000000 011111
Q ss_pred hhhhhHHHHHHHHHHhhhhhHHHHHHh-hhccC--CC---------C-ee-eCC-CCCCCCCChhHHHHHHHHHHHHHHH
Q 007405 378 LVPIPACTIMLNVILTEFLTLSVQQAY-TMNTH--MG---------K-LK-LPV-TCHPRGASQLQRVGIGLAVSILSVI 442 (605)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~---------~-~~-ip~-~~~~~~~~~~~~i~~G~~~~~~~~~ 442 (605)
.+. ...+++..++...+...+... .++.. .. + .. ++. .+..++++.++...+|.++.+++.+
T Consensus 241 ~l~---~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~ 317 (467)
T COG2211 241 LLL---MNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYL 317 (467)
T ss_pred HHH---HHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 111 122222222222221111100 00000 00 0 00 111 3344455666667778777777776
Q ss_pred HHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhh-------cchhHHHHHHHHHH
Q 007405 443 WAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEE-------APDAMKSIGSAYAA 515 (605)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~-------~P~~~rg~~~g~~~ 515 (605)
.+.+.. . .+.++++...++.++|.+...+...+++.+. .-.+..|...|...
T Consensus 318 ~~~f~~--------------------~-~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~t 376 (467)
T COG2211 318 LLYFTP--------------------A-GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMT 376 (467)
T ss_pred HHHhhc--------------------C-cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHH
Confidence 666551 1 3556666777888888888888888888764 44566788999999
Q ss_pred HHhhHHHHHHHHHHHHhhcccC
Q 007405 516 LAGGLGCFAASILNSIIKSVTG 537 (605)
Q Consensus 516 ~~~~lg~~l~~~l~~~i~~~~~ 537 (605)
+++-+|..++..+.+++....|
T Consensus 377 F~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 377 FFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999998877554
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=1.2e-11 Score=129.90 Aligned_cols=169 Identities=15% Similarity=0.076 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+......++..........+.+.|. +++|.+..+.+...+.+.++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~ 284 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGM 284 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHH
Confidence 33444444444444444555566665 56899998899999999999999999999999997 99999999988888877
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+++.+... .+...+++..++.+++.+...+..+++..|.+|+++ |++.
T Consensus 285 ~~~~~~~~--------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~ 332 (377)
T TIGR00890 285 AAMLFIPM--------------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAAN 332 (377)
T ss_pred HHHHHccc--------------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhH
Confidence 76655311 122334455677888888888888889999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~ 273 (605)
+++++....+|..++|.+.+++.+..||++.|.+.+++.++++
T Consensus 333 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 333 YGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999988777665543
No 128
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.38 E-value=2.7e-11 Score=127.74 Aligned_cols=163 Identities=10% Similarity=0.031 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhh
Q 007405 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (605)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~ 157 (605)
.++.....+....+++.|+.+++|.+..+.++......+...++.+++|+++||+ |||+++.++.++..++.......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~- 285 (375)
T TIGR00899 208 CTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAAD- 285 (375)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHH-
Confidence 3333333444556788999999999999999888777777788889999999997 99999888776655544443332
Q ss_pred hccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHH
Q 007405 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (605)
Q Consensus 158 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~ 237 (605)
.+.+.+++.+++.|++.+...+....+..|.+|+ + +++++++++..
T Consensus 286 ---------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 331 (375)
T TIGR00899 286 ---------------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNT 331 (375)
T ss_pred ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHH
Confidence 3455666677788888888778888888898875 3 56999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 238 VTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 238 ~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
.++|..++|.+++++.+..||+..|++.++..+++.++.
T Consensus 332 ~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 332 GRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998887776666554
No 129
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.37 E-value=2.4e-11 Score=130.58 Aligned_cols=178 Identities=11% Similarity=0.044 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------hhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
..++..++..........+++.|+.+ .|.+ ....+...++..+...++.++.|+++||+ |||+++.++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~ 289 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLV 289 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 34444444444444455667778754 4544 35668888888889999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
+..++...+..... . ..+...+++.+++.|++.+...+....+++|.+|++.
T Consensus 290 ~~~v~~~l~~~~~~------~------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~---- 341 (418)
T TIGR00889 290 AWALRFGFFAYGDP------E------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI---- 341 (418)
T ss_pred HHHHHHHHHHHcCc------c------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH----
Confidence 88887666655310 0 0134566777889999999888888999999999998
Q ss_pred hhhhHHHHHHH-HHHHHHHHHHHHHHHHHHhh------hchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 225 THLDRFFNFFY-LSVTVGAIVAFTLVVYIQME------HGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 225 ~~r~~~~~~~~-~~~~ig~~i~p~i~~~l~~~------~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
|++.+++.+ ....+|..+||.++|++.+. +||++.|.+.+++.++..+++....++
T Consensus 342 --~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 342 --RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred --HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999997 56789999999999999987 469999988877766666655555443
No 130
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=8.3e-11 Score=125.44 Aligned_cols=177 Identities=15% Similarity=0.041 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+...+..++...+++++..+++.|+.+ +|.+..+++...+.+.++..++.++.|+++||+ |||+.+.++..+..++.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHH
Confidence 4555555666677888889999999976 899999999999999999999999999999997 99999988887777766
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhhH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDR 229 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~r~~ 229 (605)
....... .+...+. .++.|++.+...+.......+.+++ ++ |++
T Consensus 285 ~~~~~~~---------------------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~ 329 (393)
T PRK09705 285 CGFIWLP---------------------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI------AGK 329 (393)
T ss_pred HHHHHcc---------------------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHH------HHH
Confidence 5544320 1111222 2356788888778777777788764 45 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhccccc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPLYR 284 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~~~~ 284 (605)
.+++.+...++++.++|.+.|++.+..| |...|++.++..++..++.....++.+
T Consensus 330 ~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 330 LVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999886 788888877777666666555555443
No 131
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.36 E-value=4.5e-11 Score=126.13 Aligned_cols=179 Identities=12% Similarity=-0.004 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHH-HHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-AIFTTIYLA 148 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~-~~~~~~~~~ 148 (605)
.++...+..++.....+.+..+++.|+.+.+|.+..+.++......++..++.+++|+++||+ |||+.. ........+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~ 294 (399)
T TIGR00893 216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAII 294 (399)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHH
Confidence 466677777788888888889999999999999999999999999999999999999999997 988611 111111111
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
+.+...+....... . .+....+....+.+++ .+..+...++.+|.+|+++ |+
T Consensus 295 ~~~~~~~~~~~~~~--~-------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~g 346 (399)
T TIGR00893 295 AGLVLSLLMFATNY--V-------------------NIPYAALALVALGFFG-LGAGAIGWALISDNAPGNI------AG 346 (399)
T ss_pred HHHHHHHHHHHhcc--c-------------------hhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhH------HH
Confidence 11111111000000 0 1222333333333334 3378889999999999998 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHH
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~ 277 (605)
+.+++.+...++|..++|.+.+++.+..| |.+.|++.++..+++.+..+
T Consensus 347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888 99999888777666655443
No 132
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.36 E-value=5.1e-11 Score=127.38 Aligned_cols=170 Identities=10% Similarity=0.004 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 007405 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (605)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~ 152 (605)
......++....++.+..++|.|+.+ .|++..+.+.....+.++..++.++.|+++||+ |||+.+.++.+...++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 224 LLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHH
Confidence 33344455555666777888888865 799999999999999999999999999999997 9999988876665555554
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHH
Q 007405 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (605)
Q Consensus 153 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~ 232 (605)
+... .+...+.+..++.|++.++..+...++..|.+|+++ |++.++
T Consensus 302 ~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g 347 (406)
T PRK11551 302 LAAA----------------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVG 347 (406)
T ss_pred HHhc----------------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhh
Confidence 4432 234445555667788887788888999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHH
Q 007405 233 FFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 233 ~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (605)
+.+....+|..++|.++|++.+..+ |...+++.....+++.++.+.
T Consensus 348 ~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 348 AAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988654 555666555555555444443
No 133
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.35 E-value=7.2e-12 Score=111.77 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=112.7
Q ss_pred HHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHH
Q 007405 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (605)
Q Consensus 112 ~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 191 (605)
+.+.++..++.++.|+++||+ |||+.+.++..+..++.+.+... .+.+.+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~ 55 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS----------------------------SNITVLI 55 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh----------------------------ccHHHHH
Confidence 345667788899999999997 99999999988888887776654 3566778
Q ss_pred HHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 007405 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (605)
Q Consensus 192 ~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i 271 (605)
+.+++.|++.+...+...++..|.+|+++ |++..++.+....+|..++|.+.+++.+..+|++.|++.++..++
T Consensus 56 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 56 IARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 88899999999999999999999999998 999999999999999999999999999888999999887776666
Q ss_pred HHHHHHH
Q 007405 272 SNMLFFI 278 (605)
Q Consensus 272 ~~~~~~~ 278 (605)
..+....
T Consensus 130 ~~~~~~~ 136 (141)
T TIGR00880 130 AFILLAF 136 (141)
T ss_pred HHHHHhh
Confidence 5555444
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=4.7e-11 Score=127.61 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 007405 79 MAERMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (605)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~ 155 (605)
++.......+.++++.|+.+..+.... ..+.+...+.++..++.++.|+++||+ |||+++.++.++..++.+....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSF 307 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 333444445567778888765443322 234555566677888889999999997 9999999888877766665554
Q ss_pred hhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHH
Q 007405 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (605)
Q Consensus 156 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~ 235 (605)
. .+.+.+++.+++.|++.+...+...+.+.+..|+++ |++.+++++
T Consensus 308 ~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~ 353 (408)
T PRK09874 308 V----------------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQ 353 (408)
T ss_pred h----------------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHH
Confidence 3 345667778888999999999999999999888888 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 236 LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 236 ~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
....+|..+||.++|++.+..||++.|++.+++.+++.+..+.
T Consensus 354 ~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 354 SFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988877776665544
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.34 E-value=1.3e-10 Score=123.83 Aligned_cols=174 Identities=14% Similarity=-0.038 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++......++.....++...+++.|+.+.+|.+..+++++...+.++..++.++.|+++||+ |||+.+ ++..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 33344444555555566677888899888999999999999999999999999999999997 987654 4444433333
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
....... .+...+++..++.|++.+...+...+.+.+..| +. |+++
T Consensus 285 ~~l~~~~---------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~ 330 (390)
T PRK03545 285 LLLLPAA---------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVA 330 (390)
T ss_pred HHHHHHh---------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHH
Confidence 3322210 345566667778888887777777788888766 45 8899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
+++++....+|..+||.++|++.+.+|++..|++.+++.+++++......
T Consensus 331 ~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 331 MALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99998889999999999999999999999999998888777776655544
No 136
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=6.5e-11 Score=127.99 Aligned_cols=180 Identities=15% Similarity=0.092 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccc--hHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG--RYWTIAIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--R~~~~~~~~~~~~ 147 (605)
.++...+..++....++++..++|.|+.+++|++..+++...+.+.++..++.+++|+++||+.+ |++......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 35666666666667777788899999998999999999999999999999999999999999622 2332222221111
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
+....+..... .+.....+..++.|++..+.........+|.+|++. |
T Consensus 324 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 371 (434)
T PRK11663 324 LSVGSLWLMPF--------------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------A 371 (434)
T ss_pred HHHHHHHHccc--------------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------H
Confidence 12111111100 122223333344454433333334556789999888 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
++..++.+...++|..++|.+.+++.+..||...|++.+++.+++.+..+...+
T Consensus 372 g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 372 GAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999888877666555444333
No 137
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.33 E-value=4.7e-11 Score=131.23 Aligned_cols=150 Identities=16% Similarity=0.122 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
.+..++|.|+++++|++..+++++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+...... +
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~-------~- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG-------G- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc-------c-
Confidence 4567899999999999999999999999999999999999999997 999998887766555544333221 0
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.+.+.+.+..++.++...+..+..++++.|.+|++. |++.+++++...++|+.+||
T Consensus 364 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp 419 (496)
T PRK03893 364 ------------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAP 419 (496)
T ss_pred ------------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHH
Confidence 233333344444444334445677788999999988 99999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHH
Q 007405 247 TLVVYIQMEHGWGSAFGALAIAM 269 (605)
Q Consensus 247 ~i~~~l~~~~gw~~~f~~~~~~~ 269 (605)
.++|++.+.+||+..+.+.+...
T Consensus 420 ~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 420 ILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHhccCChHHHHHHHHHHH
Confidence 99999999999988776555443
No 138
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.32 E-value=1.6e-10 Score=122.82 Aligned_cols=168 Identities=9% Similarity=-0.082 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++..++..++...+.+...++.+.|+++ +|.+..+.+.+.+...++..+..++.|++.||+ |+|+++.++.++..+.
T Consensus 206 ~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~~ 283 (382)
T TIGR00902 206 MNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVGR 283 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHHH
Confidence 36666666777777788888899999965 899999999998888899999999999999997 9999999999999998
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+..+++ .+.+.+++..++.|+..+...+....++.+. |+++ |++
T Consensus 284 ~~~~~~~----------------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~ 328 (382)
T TIGR00902 284 WAIIGAI----------------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAK 328 (382)
T ss_pred HHHHHhH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHH
Confidence 8877765 5677888889999999999999999999987 8777 899
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYL-SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 230 ~~~~~~~-~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (605)
+.++++. ...+|..++|.++|++.+..|+ ..|++.+++.++++++
T Consensus 329 ~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 329 LQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999764 6789999999999999999886 5677777666655544
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.31 E-value=9.2e-11 Score=126.06 Aligned_cols=163 Identities=12% Similarity=-0.032 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007405 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (605)
Q Consensus 85 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (605)
.+++..++|.|+.+.+|.+..+.+++.+.+.++..++.++.|+++||. ++++.+.++.++..++.+++.+.
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 356677889999888999999999999999999999999999999986 88888888887777776665543
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 007405 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (605)
Q Consensus 165 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i 244 (605)
.+.....++.++.|++.+...+...+++.|.+|++. |++.+++++...++|..+
T Consensus 310 --------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 310 --------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAI 363 (417)
T ss_pred --------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhH
Confidence 345556667778888888777777889999999888 999999999999999999
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 245 ~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
||.+.|++.+..|++..+++.+.+.++..++.....++
T Consensus 364 g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 364 GAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999998888877766555444444443333
No 140
>PRK12382 putative transporter; Provisional
Probab=99.31 E-value=8.4e-11 Score=125.21 Aligned_cols=162 Identities=14% Similarity=0.095 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (605)
Q Consensus 79 ~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~ 158 (605)
++....+..+..+.+.|+.+ .|++. .+.....+.++..++.++.|++.||+ |||+.+.++..+..++.++..+.
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~-- 299 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA-- 299 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc--
Confidence 33445555666777888754 46543 45556667778888999999999997 99999999888888877666553
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHH
Q 007405 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (605)
Q Consensus 159 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~ 238 (605)
.+...++++.++.|++.+...+...+...|.+|+++ |++.+++++...
T Consensus 300 --------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 347 (392)
T PRK12382 300 --------------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQ 347 (392)
T ss_pred --------------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHH
Confidence 345566677788899988888888888899999888 999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 239 ~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
.+|..++|.+.+++.+..||++.|.+.+++.+++.++.+.
T Consensus 348 ~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 348 DIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988877777665544
No 141
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.31 E-value=3.6e-11 Score=129.37 Aligned_cols=161 Identities=12% Similarity=0.089 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 83 MAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (605)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~ 159 (605)
..+.....+++.|+.+.+ +.+..+.+.+.++..++..++.+++|+++||+ |||+.+.++.++..++..+..++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~--- 312 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFA--- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhc---
Confidence 333344455777776544 56667778888888888899999999999997 99999999888888887777664
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH-HHHHH
Q 007405 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF-FYLSV 238 (605)
Q Consensus 160 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~-~~~~~ 238 (605)
.+.+.+++.+++.|++.+...+....++.|.+|++. |++..+. ++...
T Consensus 313 -------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~ 361 (420)
T PRK09528 313 -------------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAK 361 (420)
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHH
Confidence 356677778888898888877788889999999887 7777655 66778
Q ss_pred HHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 239 ~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
.+|..++|.+.|++.+..||+..|.+.+++.++..++.+.
T Consensus 362 ~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 362 QLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999877776655544443
No 142
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=7.7e-11 Score=125.37 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=127.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
.+|+.........++.....+++..+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~ 313 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLA 313 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHH
Confidence 3444344444444444555566778899999999999999999999999999999999999999997 999998888765
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..+..+..... . .+.+.+.++.++.+++.++..+..++++.|.+|+++
T Consensus 314 ~~~~~~~~~~~-------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 361 (405)
T TIGR00891 314 GQLLIIPVFAI-------G--------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ----- 361 (405)
T ss_pred HHHHHHHHHHh-------C--------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch-----
Confidence 53322222111 0 234455566566777777777888899999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGA 264 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~ 264 (605)
|++.+++.+...++|..++|.+.|++.+..| |...+..
T Consensus 362 -~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 362 -RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred -hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999999999999999988 7766554
No 143
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.29 E-value=2.4e-10 Score=121.31 Aligned_cols=155 Identities=16% Similarity=0.148 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007405 82 RMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKV 161 (605)
Q Consensus 82 ~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (605)
...+.....++|.|+++ .|.+..+.+...+...++..++.++.|+++||+ |||+++.++.++..++.+... .
T Consensus 213 ~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~----- 284 (381)
T PRK03633 213 GIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S----- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-----
Confidence 33444455678888865 699999999989999999999999999999997 999999888877776654432 1
Q ss_pred cCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHH
Q 007405 162 FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG 241 (605)
Q Consensus 162 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig 241 (605)
. ...+..+++.|++.++..|...+...|..|+++ ++...+.++...++|
T Consensus 285 ------------------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG 333 (381)
T PRK03633 285 ------------------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVG 333 (381)
T ss_pred ------------------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHH
Confidence 1 122345566777777778888888999998877 777778888889999
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 007405 242 AIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 242 ~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (605)
..+||.++|++.+++||++.|.+.+.+.++..+.
T Consensus 334 ~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 334 SLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999877776655443
No 144
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=1.7e-10 Score=124.77 Aligned_cols=161 Identities=15% Similarity=0.068 Sum_probs=114.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
+|+.....+...++....++++..++|.|+++.+|++..++++....+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~ 314 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLA 314 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHH
Confidence 344333334444556667778889999999999999999988888888888999999999999997 9999887765443
Q ss_pred HHHHHH-HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 147 LAGLTG-ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 147 ~~~~~~-~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
.+...+ ...... . .+...+.+..++.+++.+...+....+..|.+|++.
T Consensus 315 ~~~~~~~~~~~~~------~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~----- 364 (434)
T PRK15075 315 ILTAYPALSWLVA------A-------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV----- 364 (434)
T ss_pred HHHHHHHHHHHHc------C-------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc-----
Confidence 322211 111100 0 122333344455566666666667788999999998
Q ss_pred hhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhhchH
Q 007405 226 HLDRFFNFFYL-SVTVGAIVAFTLVVYIQMEHGWG 259 (605)
Q Consensus 226 ~r~~~~~~~~~-~~~ig~~i~p~i~~~l~~~~gw~ 259 (605)
|++++++.+. +..+++.++|.+.+++.+..|+.
T Consensus 365 -rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 365 -RTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred -cchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 9999998554 44456888999999999988853
No 145
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.28 E-value=3.2e-10 Score=122.49 Aligned_cols=171 Identities=11% Similarity=0.044 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 007405 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (605)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~ 155 (605)
...++....+|++..++|.|+.+.+|.+..+++...++...+..++.++.|+++||+ |||+++.++.++..+..+....
T Consensus 250 ~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~ 328 (432)
T PRK10406 250 GFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILS 328 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHH
Confidence 333444677888999999999999999998988888887788888889999999997 9999887766544333322211
Q ss_pred hhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHH
Q 007405 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (605)
Q Consensus 156 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~ 235 (605)
... .. .+....+....+.+++.+...+....+.+|.||++. |++++++.+
T Consensus 329 ~~~-----~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~ 378 (432)
T PRK10406 329 ALQ-----NV-------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSY 378 (432)
T ss_pred HHH-----cC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHH
Confidence 100 00 112221221222223333334556788899999999 999999977
Q ss_pred HHH-HHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHH
Q 007405 236 LSV-TVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 236 ~~~-~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (605)
... .+++..+|.+.+++. .+| |...+++.++..+++++..++
T Consensus 379 ~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 379 AVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 654 444556888888664 445 555666555555555554443
No 146
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=3.8e-10 Score=120.67 Aligned_cols=175 Identities=14% Similarity=0.057 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH-HHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA-IFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~-~~~~~~~~~ 149 (605)
++...+..++....+++..+++|.|++ ++|++..+++.+...+.++..++.++.|+++||+ |||+.+. .+.+...++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~ 301 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHH
Confidence 555666677777888888999998885 5899999999988889999999999999999997 9888764 233333333
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+.+.+... ... .+....++..++.|++.+...+ ..+...|..| ++ |++
T Consensus 302 ~~~l~~~~~---~~~--------------------~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~------~g~ 350 (402)
T TIGR00897 302 TLALYYIPQ---HFG--------------------HSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KH------KGA 350 (402)
T ss_pred HHHHHHHHH---ccC--------------------CcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-ch------hHH
Confidence 222222100 000 2345555667778888777654 3456667544 56 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
.+++.+....+|..++|.+++++.+.+||...|++.+++.+++.++..+
T Consensus 351 ~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 351 AMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888777666555443
No 147
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=6.6e-11 Score=128.09 Aligned_cols=179 Identities=15% Similarity=0.065 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++...+..++.....+++..++|.|+++..|++..++++....+.++..++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 356666666666777788889999999999999999999999999999999999999999997 7544323333222221
Q ss_pred H---HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 150 L---TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 150 ~---~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
. ..+... +. .+.....+..++.|++..+..........|.+|++.
T Consensus 331 ~~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 378 (438)
T TIGR00712 331 TIAVIVYWMN-------PA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------ 378 (438)
T ss_pred HHHHHHHHhc-------CC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------
Confidence 1 111111 00 122233333444555443333333456779999988
Q ss_pred hhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 227 LDRFFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~-~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
|+++.++.+...++|+ .++|.+.|++.+..||.+.|++.....+++.+..+...+
T Consensus 379 ~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 379 AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred eeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988877765 689999999999999999998877766666665554443
No 148
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.26 E-value=4.2e-11 Score=115.63 Aligned_cols=137 Identities=15% Similarity=0.191 Sum_probs=112.4
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 169 (605)
..+..+.+.+.+++.++..++.+.|..-..+.+.++|||.||.+|-|..-++-+++..+|-+..+.-..
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi----------- 132 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI----------- 132 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-----------
Confidence 456777788888888888999999999999999999999999889776655555555667666554211
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 007405 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (605)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~ 249 (605)
...++++..+|++.|+|.-....+.+.+...+|..++ .+-.+++.-....+|..+-..+.
T Consensus 133 --------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm 192 (459)
T KOG4686|consen 133 --------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLM 192 (459)
T ss_pred --------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeec
Confidence 1578999999999999988888889999999999999 99999998888888888887778
Q ss_pred HHHHhhhc
Q 007405 250 VYIQMEHG 257 (605)
Q Consensus 250 ~~l~~~~g 257 (605)
+++.+..+
T Consensus 193 ~~ly~~~~ 200 (459)
T KOG4686|consen 193 PFLYDTMG 200 (459)
T ss_pred HHHHHHHH
Confidence 88877654
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.26 E-value=5.2e-10 Score=122.80 Aligned_cols=173 Identities=10% Similarity=0.069 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHH-HHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 007405 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVN-NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (605)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~ 156 (605)
.++.....+....+.++|+.+.+|++..+.+.... ...++..++.+++|+++||+ |||+.+.++.++..++.+.....
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l 309 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLL 309 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555566677888988889999999998874 55678999999999999997 99998877766555544333221
Q ss_pred hhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHH
Q 007405 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (605)
Q Consensus 157 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~ 236 (605)
... + .+...+.+..++..++.|...+...++..+..+++. +++.+++.+.
T Consensus 310 ~~~----~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s 359 (491)
T PRK11010 310 SIT----D--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSA 359 (491)
T ss_pred Hhc----c--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHH
Confidence 100 0 133333444455455555555666788889999888 8888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 237 SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 237 ~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
..++|..+++.+.|++.+..||+..|.+.+++.++++++....++
T Consensus 360 ~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 360 LSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999989889999999999999999888888777766655443
No 150
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=5.2e-10 Score=121.27 Aligned_cols=183 Identities=13% Similarity=0.052 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchH--HHHHHHHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY--WTIAIFTTIY 146 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~--~~~~~~~~~~ 146 (605)
|.+...++..++.+-+..++......|.++++|++..+...+..+..+...++.+++|++.||+ |.| ++++++++++
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHH
Confidence 4566677777888888888999999999999999999999888889999999999999999997 988 8888888776
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.+..+.-.+... +..... .+.+.+++.-++.|+..|+.++..-++.+++.|+++
T Consensus 360 ~~i~~~g~~G~~-~~~~g~-------------------~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------ 413 (477)
T PF11700_consen 360 IIIPLYGLFGFW-PSFFGL-------------------KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------ 413 (477)
T ss_pred HHHHHHHHHHhh-hcccCc-------------------ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------
Confidence 443322222000 000000 345667777778999999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHH
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (605)
.+.+|++|.+..-..+.+||++.+.+.+.+| -|+++....++.+++++++..
T Consensus 414 e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 414 EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999999887 888888877777777776544
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=7.8e-10 Score=114.79 Aligned_cols=178 Identities=15% Similarity=0.080 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++..++..++...+.|...+++.+|+++..|+|....++++..|.++..++.+++|+++|| +.|+++.....+..+.
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALA 289 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHH
Confidence 47888888999999999999999999999999999999999999999999999999999998 7888888887777777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+.+.+.. .+....++..++.|+...........-.++ .-++. +..
T Consensus 290 ~l~l~~~~---------------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~~ 335 (394)
T COG2814 290 LLALTFTG---------------------------ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------ADL 335 (394)
T ss_pred HHHHHHhc---------------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hHH
Confidence 77766542 244555555566777766655555555566 33455 789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcccc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLY 283 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~ 283 (605)
+.+++....|+|-.+|..++|.+.+++|+....++.++..++++++.+...+..
T Consensus 336 a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~ 389 (394)
T COG2814 336 AGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKD 389 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999998888887776654433
No 152
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.23 E-value=2.8e-10 Score=123.45 Aligned_cols=187 Identities=13% Similarity=0.001 Sum_probs=126.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++..++..+......+.+..+ .+++.+.+|++..++++......++..++.+++|+++||+ |||+.+.++.++..++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYY-SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHH-HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHH
Confidence 333333333333333333333 4455567899998888888888999999999999999997 99999999988877777
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+++.+...... ++ . .+..+...+....++.+....+..+....+..|.+|+++ |++.
T Consensus 364 ~~~~~~~~~~~--~~----------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~ 420 (481)
T TIGR00879 364 FVLGILGASFV--TG----------S-----SKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKG 420 (481)
T ss_pred HHHHHHhhccc--CC----------c-----ccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHH
Confidence 66663211000 00 0 000022222222222222223344666778899999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
.++.+...++|+.++|.+.+++.++.+|++.|++.+++.+++.++.+...++
T Consensus 421 ~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 421 ISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheeccc
Confidence 9999999999999999999999998899999988877776666655444443
No 153
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.22 E-value=2.4e-10 Score=124.27 Aligned_cols=169 Identities=7% Similarity=-0.024 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc-cchHHHHHHHHHHH--H
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY-LGRYWTIAIFTTIY--L 147 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~-~GR~~~~~~~~~~~--~ 147 (605)
++......++..++++....+++.|+.+ +|++..+++.+.+...++..++.+++|+++||. +++++...++..+. .
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 321 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 5555666666777777788889999864 799999999999999999999999999999984 24444444333222 2
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++.+++... .+.+.+++.+++.|++.+...++..+++.|.+|+++ +
T Consensus 322 l~~ll~~~~----------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~ 367 (455)
T TIGR00892 322 LTHLLCALA----------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------F 367 (455)
T ss_pred HHHHHHHHh----------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------H
Confidence 333333332 356677788889999999999999999999999888 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHH
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNM 274 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~-gw~~~f~~~~~~~~i~~~ 274 (605)
++.+++++...++|..+||.++|++.+.. +|++.|++.+++.+++.+
T Consensus 368 g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 368 SSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999887 499999988876655544
No 154
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.21 E-value=2.4e-10 Score=121.21 Aligned_cols=191 Identities=13% Similarity=0.037 Sum_probs=146.0
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccch-HHH
Q 007405 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWT 138 (605)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR-~~~ 138 (605)
....+.+||.+++..+..++..+.++.+.+..-+|+++ +.+.+.+..|+++++..++..++.|..|+.+.|. |. |+.
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 45667899999999999999998888777778889876 5777788889999999999999999999999996 74 677
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 007405 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (605)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (605)
++.+.++.++|.++....... ++ ...+.++++|++.|+|.+.. ...=++++|....
T Consensus 105 li~s~ii~~~g~llY~~l~~~----~~-------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYV----PN-------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTV 160 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhc----cc-------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCc
Confidence 778888888888887332221 11 26788999999999997764 5677899998888
Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh----h---------hchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM----E---------HGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~----~---------~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
++ |.++++....+..+|..+||.+...+.. . .-+..+-|+.+++.++.++++....++
T Consensus 161 ~d------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 161 ED------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred cc------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 88 9999998777777777777776644321 1 113456677777766666666555554
No 155
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=4e-10 Score=108.97 Aligned_cols=174 Identities=17% Similarity=0.116 Sum_probs=137.5
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH
Q 007405 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (605)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~ 140 (605)
...+.....++|.+.++.++...+.+-+.+.-+.+.++.+|+|+..++.+.+...+..++.+|+.|.++|++ ||+-...
T Consensus 256 Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv 334 (459)
T KOG4686|consen 256 LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWV 334 (459)
T ss_pred cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhH
Confidence 555555556799999999998888888888889999999999999999999999999999999999999998 9988777
Q ss_pred HHHHHHHH-HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 007405 141 IFTTIYLA-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (605)
Q Consensus 141 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (605)
.+..+..+ +-..++++ .+.-+++..+.|+..........+.++-..|++
T Consensus 335 ~~a~~~tl~~H~~l~Ft------------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~ 384 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFT------------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEE 384 (459)
T ss_pred HHHHHHHHHHhhhHHhh------------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH
Confidence 66554433 43444442 233455667778887776666788888888988
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---hHHHHHHHHHHHHH
Q 007405 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMGI 271 (605)
Q Consensus 220 ~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g---w~~~f~~~~~~~~i 271 (605)
+ .+++++..+...|+|-.+-|+++|.+.+.-| |--.|++....+.+
T Consensus 385 q------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL 433 (459)
T KOG4686|consen 385 Q------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMAL 433 (459)
T ss_pred H------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999988755 44455554444433
No 156
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.20 E-value=7.5e-10 Score=114.45 Aligned_cols=165 Identities=12% Similarity=0.012 Sum_probs=113.0
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH
Q 007405 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (605)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~ 140 (605)
.+.-+++|-.++...+..+.+.+. +.-......|....++ +...+-|...+|++.+......+-|+.|++ |-|.+.+
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~q-WI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~l 113 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQ-WIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALL 113 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcch-heeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHH
Confidence 345566665444444433333222 2223445667777788 666677899999999999999999999997 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 007405 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (605)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (605)
++..+..+|..+=.++.. +...+. ......+.+..+.+...-.+...-+-+-+-+|++++
T Consensus 114 lgt~ln~iGa~Ir~iss~-p~v~~~-------------------f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q 173 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSL-PFVPPL-------------------FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ 173 (480)
T ss_pred HHHHHHHHHHHHhhhccC-cccccc-------------------chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch
Confidence 999999999888777632 111111 111255667777776666655555566678999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
|.++..+-.++..+|.++|.++...+..
T Consensus 174 ------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 174 ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred ------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 9999988777777777777666555543
No 157
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.20 E-value=1.9e-10 Score=120.84 Aligned_cols=161 Identities=16% Similarity=0.128 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH--HHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT--TIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~--~~~~ 147 (605)
.++.+.+..++.....+++..+++.|+.+.+|.+..+++...+.+.++..++.++.|+++||..+||+...... ....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 35666666677777777888899999999999999999999999999999999999999998534444332221 1111
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++....... +. .+.....+..++.|+...+..+....+..|.+|++. |
T Consensus 297 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 344 (379)
T TIGR00881 297 VSLLVYWLN-------PA-------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------A 344 (379)
T ss_pred HHHHHHhcC-------cc-------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------h
Confidence 121111111 00 233444555566676666666667788899999998 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHH
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF 262 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f 262 (605)
++..++++...++|..++|.+.|++.+..||++.|
T Consensus 345 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 345 GTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999999998754
No 158
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.19 E-value=6.5e-10 Score=114.30 Aligned_cols=184 Identities=13% Similarity=-0.013 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
..|.+.+..+...-++-++..+++.|++++++.++.+++.....+.+...+..++||+||||+ |.+|+.++.....+++
T Consensus 219 ~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~ 297 (417)
T COG2223 219 DTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALA 297 (417)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHH
Confidence 477888888888888888999999999999999999999999999999999999999999998 9999988888888887
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.....+.... .. + ..+...+++..+.+++..|.-...+..++...||.+ -+.
T Consensus 298 ~~~l~~~~~~---~~--------~----------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~ 349 (417)
T COG2223 298 AALLSLFLTG---FG--------H----------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGA 349 (417)
T ss_pred HHHHHccccc---cc--------c----------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhH
Confidence 7777664210 00 0 023344444444445555555556667777777764 578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
..++.....++|+..-|...+...+.+| +...|++.....+++.++....+.+
T Consensus 350 v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 350 VTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888999999999999999999888 8899998888877777765554443
No 159
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.18 E-value=1.7e-09 Score=111.30 Aligned_cols=161 Identities=11% Similarity=0.008 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~ 147 (605)
..+...+..++...+-.++..|++.|+.+. +|+++.+++...+.+.++..++.+++++++||+ |+++++.++.++.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 345444444444444556778999999864 799999999999999999999999999999997 99999888887777
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++.++.... .+.. ...+.++.|++.+...|...+...+.+|++. ++
T Consensus 220 ~~~~l~~~~----------------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-----~~ 265 (310)
T TIGR01272 220 LLSIGAALT----------------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-----SQ 265 (310)
T ss_pred HHHHHHHHc----------------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----hh
Confidence 766544432 1111 2234557899999999999999988888653 13
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~ 268 (605)
++ ++. ....+|+.+.|.+.|++.|..|.+.+|++..++
T Consensus 266 as--ai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 266 GS--GIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hH--HHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 44 343 456689999999999999998988888755443
No 160
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=1e-09 Score=120.01 Aligned_cols=173 Identities=10% Similarity=-0.007 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHH-----HHH--HHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-----TIA--IFT 143 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~-----~~~--~~~ 143 (605)
.|.+.+..++.....+++..+++.|+.+++|++..+++...+.+.++..++.+++|+++||+ |||+ ... +..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 34444444444555566777899999999999999999999999999999999999999997 8752 222 222
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
++..++.++.... .+....++..++.+++.+...+...++..+..| +.
T Consensus 333 ~l~~i~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~--- 380 (476)
T PLN00028 333 TLGGVFCIWLGRA----------------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS--- 380 (476)
T ss_pred HHHHHHHHHhccc----------------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh---
Confidence 2211111211111 233334444455566555555555566666544 45
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 224 ~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
|+...++.+.+.++|+.++|.+.+ ..+..+|..+|++.+++.+++.++.++.+
T Consensus 381 ---~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 ---LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred ---chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 888888877777777777766543 22334699999998887777766665544
No 161
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.14 E-value=2.5e-09 Score=115.14 Aligned_cols=148 Identities=15% Similarity=0.027 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007405 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (605)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (605)
...+.+..+++.|+.+ .|.+..+.+...+...++..++.+++|+++||+ |||+++..+.++..++........
T Consensus 245 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~----- 317 (426)
T PRK12307 245 GANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP----- 317 (426)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 3444566788888875 699999989888888999999999999999997 999999888877665544443220
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 007405 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (605)
Q Consensus 163 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 242 (605)
+ .....+.+..+..+++..+..+..+.++.|.+|++. |++++++.+....+|+
T Consensus 318 --~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~ 370 (426)
T PRK12307 318 --Q-------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSG 370 (426)
T ss_pred --c-------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHH
Confidence 0 122222222222333333444567788899999998 9999999999999999
Q ss_pred HHHHHHHHHHHhhhchHHHHHH
Q 007405 243 IVAFTLVVYIQMEHGWGSAFGA 264 (605)
Q Consensus 243 ~i~p~i~~~l~~~~gw~~~f~~ 264 (605)
.++|.+.+++.+..|+....++
T Consensus 371 ~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 371 TFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHHHHHHHcccHHHHHHH
Confidence 9999999999998886654333
No 162
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.13 E-value=6.7e-09 Score=106.94 Aligned_cols=84 Identities=10% Similarity=0.027 Sum_probs=71.5
Q ss_pred hhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh---------
Q 007405 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME--------- 255 (605)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~--------- 255 (605)
.++..++++.++.|.|.+..++..++++++..++++ +.+.+++......+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 478899999999999999999999999999999988 99999999999999999999999987732
Q ss_pred -------hchHHHHHHHHHHHHHHHH
Q 007405 256 -------HGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 256 -------~gw~~~f~~~~~~~~i~~~ 274 (605)
..|+++|++.+.+..+..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3688898866555444333
No 163
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.13 E-value=9.9e-10 Score=117.91 Aligned_cols=164 Identities=8% Similarity=-0.085 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHH-HHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-AIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~-~~~~~~~~ 147 (605)
.+|...+..++....++++.+++|.|+.+ ..+.+..+++.......++..++.+++|+++||+ |||+.. .+..++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 46677777788888888999999999977 3477888889888999999999999999999997 876643 33333333
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
++..+ .... .+....+++..+.++|.....+.......|.+|+++ |
T Consensus 322 ~~~~~-~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~ 367 (412)
T TIGR02332 322 AGWLL-ASAT---------------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------R 367 (412)
T ss_pred HHHHH-HHhc---------------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------H
Confidence 33211 1110 111112222223333433333444455567888888 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHH
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIA 268 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~ 268 (605)
++++++.+...++|+.++|.+.+.+.+..| |.+.|++.+++
T Consensus 368 ~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 368 AIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999999999875 99998876654
No 164
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.13 E-value=3.2e-09 Score=115.88 Aligned_cols=178 Identities=17% Similarity=0.081 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHH--------
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-------- 139 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~-------- 139 (605)
++.+|...+..++....++.+.+++|.|+.+.+|.+..++++..++..++..++.+++|+++||+ ++|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 34578888888888889999999999999999999999999999999999999999999999986 543211
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 007405 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (605)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (605)
..+......+...+..... . .+....++...+.+.+.++..+.......|..|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~- 392 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALPYL-----S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR- 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHHc-----C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-
Confidence 1111111111111111100 0 1223333344444555554455555555566654
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh---chHHHHHHHHHHHHHHHHHHHH
Q 007405 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH---GWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 220 ~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~---gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
. ++...++.+...++|+.++|.+.+++.+.. +|...|++.++..+++.++...
T Consensus 393 ~------~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 393 F------LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5 899999999999999999999999987643 4888888888777776655443
No 165
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.13 E-value=1.8e-09 Score=112.98 Aligned_cols=153 Identities=9% Similarity=0.005 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLS-VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
++......++....+++.. .+.+.|.++.+|.+..+.+.+.....++..++.++.|+++||+ |||+.+..+.++..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 290 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLA 290 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Confidence 4445555555555655555 6677787777999999999999999999999999999999997 9999988887766666
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.....+.. .+.+.+++..++.|++.+...+...+++.|.+|+++ |++
T Consensus 291 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 337 (365)
T TIGR00900 291 ILVVGLTP---------------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGR 337 (365)
T ss_pred HHHHHhhc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHH
Confidence 65555430 125667777888999999999999999999999988 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~g 257 (605)
.+++++...++|..++|.++|++.+..|
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 338 VFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999988654
No 166
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.12 E-value=5.3e-09 Score=111.03 Aligned_cols=165 Identities=7% Similarity=-0.102 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++...+..++....++....+++.|+. +.|.+..+.+.+.+...++..+..++.|++.||+ |+|+.+.++.++..++.
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence 555555555555666667778888985 5899999999888888888888899999999997 99999999988888777
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+.+... .+.+.+++..++.|++.+...+....+..+. ++++ +++.
T Consensus 285 ~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~ 329 (382)
T PRK11128 285 GLMGST----------------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRL 329 (382)
T ss_pred HHHHhh----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHH
Confidence 666543 4567777888889999888888888887776 4444 6777
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q 007405 231 FNFFY-LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (605)
Q Consensus 231 ~~~~~-~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~ 273 (605)
.++++ ....+|..+||.++|++.+..|+. .|++.+++.++++
T Consensus 330 ~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 330 QALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 78765 456788899999999999998874 5665555544443
No 167
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=7.1e-09 Score=110.96 Aligned_cols=171 Identities=11% Similarity=-0.102 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++...+...+.....+......|.|+.+.+|+++.+.++......++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444444444455555666678888889999999988887777778889999999999997 99999999888877777
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
.+..+.... .+ .+...++++.++.|+|.+...+......... ++++ |++.
T Consensus 296 ~~~~~~~~~----~~-------------------~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~ 345 (406)
T PRK15402 296 LLAALATVI----SS-------------------HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTV 345 (406)
T ss_pred HHHHHHHHc----cc-------------------ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHH
Confidence 776654210 00 2445566777888998887766665555433 3355 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (605)
.+.+++...+|..+|+.+++++.+..++....+..++..++.
T Consensus 346 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 346 SAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999988877665555544444333
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.12 E-value=5.7e-09 Score=110.81 Aligned_cols=172 Identities=10% Similarity=0.005 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+..+...++.....+....++++|+.+.+|++..+.+...+.+.++..++.++.|+++||+ |+|+.+.++.++..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 34444444444445555566778899888999999999999999999999999999999997 99999998888777776
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhh-hhccCCCCCchhhhhhhH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSF-GADQFDERSKDYKTHLDR 229 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~d~~~~~~~~~~~~r~~ 229 (605)
++..... .+.+..++..++.+++.++..+..... ..+..+++. ++.
T Consensus 280 ~~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~ 326 (382)
T PRK10091 280 LMLFFFG---------------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGA 326 (382)
T ss_pred HHHHHHH---------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHH
Confidence 5544321 122334444455556554444433333 334333333 443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~-~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
. ..+....+|..+||.++|++.+. .+|++.+.+.++..++.+.....
T Consensus 327 ~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 327 A--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred H--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHH
Confidence 3 33556789999999999999985 67999998887766555554443
No 169
>PRK10504 putative transporter; Provisional
Probab=99.11 E-value=4.5e-09 Score=114.81 Aligned_cols=156 Identities=10% Similarity=-0.026 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
+...+...++...++.......+.|++..+|.++.++++......++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 44455556666666555556677788888999999999888888888888889999999997 99999998888777776
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
.++.+... . .+...+.+..++.|++.+...+....+..+.+|++. ++..
T Consensus 342 ~~~~~~~~------~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 390 (471)
T PRK10504 342 LLFMLVAL------L-------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSG 390 (471)
T ss_pred HHHHhccc------c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccch
Confidence 65554210 0 223334455667788888888888899999999888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
++++++...+|..+|+.+++.+.+..|+
T Consensus 391 ~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 391 NSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999988776654
No 170
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.09 E-value=1.5e-08 Score=104.33 Aligned_cols=57 Identities=21% Similarity=0.235 Sum_probs=52.8
Q ss_pred HHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccC
Q 007405 481 CLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTG 537 (605)
Q Consensus 481 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~ 537 (605)
++.|...+-.....=++..+.+|++..+...|++++....++++||.+++++.+.++
T Consensus 349 ll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 349 LLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred HHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 456777888888999999999999999999999999999999999999999999887
No 171
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.08 E-value=8.5e-09 Score=109.75 Aligned_cols=174 Identities=7% Similarity=-0.084 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.+..+...++...+......+.+.|+.+ .|+++++.+++...... ...++.+++|++.||+ |+|+++.++.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3444445555566666667778888865 79999999988887754 5667789999999997 9999998877665333
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~r~ 228 (605)
......... ... . .+...++....+.+++.+...+...+...+..++ +. ++
T Consensus 288 ~~~~~~~~~-~~~-~--------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g 339 (390)
T TIGR02718 288 ALLWFAQAA-FWL-A--------------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AG 339 (390)
T ss_pred HHHHHHHHH-ccc-C--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hH
Confidence 222221110 000 0 1223333444455666676667777777777665 66 89
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 274 (605)
+.+++.+...++|..++|.++|++.+..||+..|++.+++.+++.+
T Consensus 340 ~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 340 TDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999898887766555543
No 172
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.07 E-value=5e-09 Score=111.75 Aligned_cols=170 Identities=12% Similarity=0.075 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
+......++....+.....+.+.|+.+.+ +.+....+...+...+...++.++.|++.||+ |||+.+.++.++..+
T Consensus 218 ~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 218 WMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHH
Confidence 33333344444444445556788887766 44556677778888888888889999999997 999999998888887
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
+..+...+ .+.+.+++..++.|++..........+..+.++++. ++
T Consensus 297 ~~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a 342 (396)
T TIGR00882 297 RIIGSSFA----------------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SA 342 (396)
T ss_pred HHHHHHhc----------------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EE
Confidence 77665543 355666777888888876665566667777778777 77
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 229 RFFNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 229 ~~~~~-~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
+..+. ++....+|..++|.++|++.+..||+..|.+.+++.++..++.
T Consensus 343 t~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 343 TIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred EeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 76666 5678999999999999999999999999998887766655443
No 173
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.05 E-value=4.7e-09 Score=114.93 Aligned_cols=155 Identities=13% Similarity=0.098 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++...+..++..+.+++...++|.|+++.+|.++.++++......++..++.++.|++.||+ |||+++.++.++..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHH
Confidence 44455666667777788888899999999999999999999999999999999999999997 99999999888887777
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
.+..+... ++ .+...++...++.|+|.+...+.......+.+|+++ |+++
T Consensus 336 ~~~~~~~~-----~~-------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~ 385 (485)
T TIGR00711 336 YWRAFTFT-----PD-------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARG 385 (485)
T ss_pred HHHhccCC-----CC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHH
Confidence 66653210 11 234555666788899998887777777788889888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEH 256 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~ 256 (605)
.++++...++|+.+|+.+.+.+.++.
T Consensus 386 ~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 386 SSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887653
No 174
>TIGR00895 2A0115 benzoate transport.
Probab=99.05 E-value=5.2e-09 Score=110.86 Aligned_cols=148 Identities=14% Similarity=0.032 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
+..+...+..++....++.+..+++ ++.+++|.+..+++...+...++..++.+++|+++||+ |||+.+....+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 3445555555666677777777777 77788999999999999999999999999999999997 998554444333332
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
+.++.... .+...+++..++.|++.++..+...++.+|.+|+++ |+
T Consensus 328 ~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g 373 (398)
T TIGR00895 328 AVLVGSTL----------------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RA 373 (398)
T ss_pred HHHHHHHh----------------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HH
Confidence 22222211 234556667788899999999999999999999998 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYI 252 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l 252 (605)
+.+++.+....+|..++|.++|++
T Consensus 374 ~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 374 TGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999875
No 175
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.04 E-value=1e-07 Score=102.53 Aligned_cols=172 Identities=14% Similarity=0.078 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHhCCChhHH-HHHHHHH----HHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFG---LSVNMVTFMFYVMHKSFADS-SNAVNNF----LGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 75 ~~~~~~~~~~~~~---~~~~l~~yl~~~~~~s~~~~-~~~~~~~----~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
....++..++.+. ...+...+.....+.+.... +...... .+...+..++-|.++||| |||..+...++..
T Consensus 24 ~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~ 102 (463)
T KOG2816|consen 24 EPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGT 102 (463)
T ss_pred HHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHH
Confidence 3333444444333 33566666666555443322 2333333 467788889999999997 9999999999888
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHH--hhcccchhhhhhhhccCCCCCchhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGF--GAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
.+..+...+. . +++++ +.++ +.+.......++++|....++
T Consensus 103 ~l~~~~~~~~-----------------------------~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~---- 145 (463)
T KOG2816|consen 103 ILPALCLLFQ-----------------------------G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE---- 145 (463)
T ss_pred HHhHHHHHHH-----------------------------H-HHHhh---hcccccchhhhhhhhhhheeeccchhH----
Confidence 8777776653 2 22322 3332 234455777888999999988
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 286 (605)
|...+++.+.+...+..++|.+++++....|...+|++..+..++..+......++....
T Consensus 146 --R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~ 205 (463)
T KOG2816|consen 146 --RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE 205 (463)
T ss_pred --HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence 999999999999999999999999999999999999999988888877766666665443
No 176
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.04 E-value=7.8e-09 Score=111.61 Aligned_cols=160 Identities=16% Similarity=0.062 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++..++..++...+++......+.|++..++ +....++......++..++.++.|+++||+ |||+++.++.++..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 35556666666667666655555556555566 455667777778888999999999999997 9999999998888877
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~r~ 228 (605)
.+...+.. .+...+++..++.|++.+...+...++++|..|.++... ...++
T Consensus 301 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 353 (437)
T TIGR00792 301 YLIFFFAG---------------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEG 353 (437)
T ss_pred HHHHHHcc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchH
Confidence 76665431 234555666678889999888999999999877432110 11278
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
..++++++...+|..+++.+.+++.+..||
T Consensus 354 ~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 354 LVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999999999887666
No 177
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.04 E-value=5.6e-09 Score=115.13 Aligned_cols=176 Identities=15% Similarity=0.089 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH------------HHHHHHHHHHHhhhHHHHHhhhccchHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN------------AVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~ 141 (605)
+....++..+.+|++..++|.+++ ..|++..+++. ......++..++.+++++++||+ |||+++++
T Consensus 293 ~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~ 370 (502)
T TIGR00887 293 TAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLM 370 (502)
T ss_pred HHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHH
Confidence 334445556677888888888885 67876543221 12223345556778899999997 99999988
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 007405 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (605)
+.++..++..+..+.... .+ .+ ..+....+...++..+..+....+.+|.+|++.
T Consensus 371 ~~~~~~~~~~~l~~~~~~----~~-------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~- 425 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNH----LS-------------------TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY- 425 (502)
T ss_pred HHHHHHHHHHHHHHHHHh----cc-------------------hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH-
Confidence 887777766655543110 00 11 111111112222223344566777899999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh----------hchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~----------~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
|+++.++.+....+|+.++|.+.+++.+. .++...|++.++..+++.+.. +..++
T Consensus 426 -----R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpE 490 (502)
T TIGR00887 426 -----RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-LLIPE 490 (502)
T ss_pred -----HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-eEecc
Confidence 99999999999999999999999998874 234456666666655554433 33344
No 178
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.03 E-value=1.6e-08 Score=110.63 Aligned_cols=157 Identities=10% Similarity=-0.038 Sum_probs=111.2
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccc
Q 007405 94 TFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (605)
Q Consensus 94 ~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 173 (605)
+++.+.+|.+.....+......+...++.+++|+++||+ |||++++++.++..++.+.+...... +.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~----~~-------- 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYT----QA-------- 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhc----Cc--------
Confidence 344567888877777777777788889999999999997 99999999999888887776543110 00
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHhhcc-cchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH--
Q 007405 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAG-IRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV-- 250 (605)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~-- 250 (605)
.. .....+.++.+++.+. ..++...+++|.+|++. |++++++.+...++|..+++.+.+
T Consensus 362 -----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 362 -----------PG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred -----------cc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 11 1222333444444443 34677899999999988 999999988888888887755544
Q ss_pred ----HHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 251 ----YIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 251 ----~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
++.+..+|++.|++.++..+++.++.+...+
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 424 DKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HhccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 4456778888888877766666555444443
No 179
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.00 E-value=2.8e-08 Score=106.61 Aligned_cols=183 Identities=14% Similarity=0.014 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.|...+..++....|.++..++|.|+++.+. .........+..+...+..|++|+|+||+ |++|++.++.++..++.
T Consensus 254 ~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 254 LWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFS 330 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHH
Confidence 6777777788777777788889999988663 33333334456678889999999999997 99999999988777766
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc---------
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK--------- 221 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~--------- 221 (605)
....+.. |. ....++..+.+..+...++.|.-.+.+..++.+.||++..
T Consensus 331 ~~~~l~l------p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~ 388 (462)
T PRK15034 331 ALLFLTL------PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGS 388 (462)
T ss_pred HHHHHHh------cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccc
Confidence 5443321 10 0003455566655555566666666677777777774100
Q ss_pred ------hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHH
Q 007405 222 ------DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 222 ------~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~ 278 (605)
..++.-+...++......+|+.+-|.+.+...+.+| +...|+...+..++++++.++
T Consensus 389 ~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 389 DEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 011125666777777888888888988787777655 788888777766655555443
No 180
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.00 E-value=7.7e-09 Score=106.55 Aligned_cols=172 Identities=13% Similarity=0.092 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.+.+.++..++.+=+..++.+....|...++|++..+...+.....+..+++++++|+|.||+ |-|+++.++++++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 455566666666666677888899999999999999999999999999999999999999997 9999999999888776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+...+. .....+++.-++.|+..|+.++..=++.++..|+++ -++
T Consensus 332 ~~~~~~~----------------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~ 377 (438)
T COG2270 332 ALYLIFL----------------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGR 377 (438)
T ss_pred HHHHHHc----------------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccc
Confidence 6655543 123344445568899999999999999999999999 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~ 276 (605)
+|++|+.....++.+||.+.+.+.+.+| -|..+....++.+++++++
T Consensus 378 fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 378 FFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred eeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 9999999999999999999999988776 6767666666656665544
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.00 E-value=5.1e-08 Score=104.01 Aligned_cols=165 Identities=9% Similarity=-0.040 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH-
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG- 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~- 149 (605)
++...+..++.....++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +|+..+ .+.++..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~-~~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALA-GAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHH-HHHHHHHHHH
Confidence 44444444555555566666765555678899999999999999999999999999999995 554434 343333333
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.++.... .+.+.+.+..++.|++.+...+..++++.+..|+ + +++
T Consensus 296 ~~l~~~~----------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~ 340 (394)
T PRK10213 296 LVLTLWG----------------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEK 340 (394)
T ss_pred HHHHHHh----------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHH
Confidence 3332222 2445666677888999999888888888888774 3 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (605)
..+++....++|..+||.++|++.+..|++..+...+++.++.
T Consensus 341 ~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 341 AGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 5566666778999999999999999989888887766554433
No 182
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.00 E-value=9e-09 Score=113.24 Aligned_cols=153 Identities=13% Similarity=0.055 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
+....+..++....+++...+++.|++..+|.++.+++.....+.++..++.+++|++.||+ |||+.+..+.++..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~ 339 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSF 339 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 44555666667777778888899999999999999999999999999999999999999997 99999988888887777
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+++..... . .+.+...+..++.|+|.|...+.......+..|+++ ++.+
T Consensus 340 ~~l~~~~~------~-------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~ 388 (495)
T PRK14995 340 YGLAMTDF------S-------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAA 388 (495)
T ss_pred HHHHHhcC------C-------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchH
Confidence 66544210 0 233445566788899999988888888888899888 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQME 255 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~ 255 (605)
.+++++..++|..+|+.+.+.+.+.
T Consensus 389 ~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 389 GAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988653
No 183
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.00 E-value=2.7e-08 Score=109.17 Aligned_cols=169 Identities=10% Similarity=0.045 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~ 153 (605)
++...++..+....+...+|.+..+.+|.+....|++.+.+.++..++.++.+++.+|+ ++++.+..+.+++.++.+.+
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH
Confidence 33334444444445556688888999999999999999999999999999999999996 99999999988888887777
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
+++ .+.+..+++.++.|++.........+.+-+..|++. |++.+++
T Consensus 302 al~----------------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si 347 (524)
T PF05977_consen 302 ALS----------------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSI 347 (524)
T ss_pred hcc----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHH
Confidence 775 466777778888999988888888899999999999 9999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 007405 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (605)
+.+....+..+|.++.|.+.+.+|-+..+.+.++..+++.++..
T Consensus 348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888877766655555443
No 184
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.00 E-value=4.4e-08 Score=104.80 Aligned_cols=153 Identities=14% Similarity=0.182 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHH-HHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCc
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDN 168 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (605)
.+.+.|+.+++|+++.+.+++..... ++..++.+++|+++||+ |||+.+.++.++..+..+.+...... +
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~----~---- 300 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT----P---- 300 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc----C----
Confidence 34456777889999999998876654 46788899999999997 99998887777666554443321110 0
Q ss_pred ccccccccCCCCCccchhHHHHHHHH----HHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 007405 169 CDRISQLLGSCEPAKSWQMLYLYTVL----YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (605)
Q Consensus 169 c~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i 244 (605)
.+.+.++++. +..|++.+...+....++.+.+|.++ + +++....++|..+
T Consensus 301 ----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~ 354 (402)
T PRK11902 301 ----------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVY 354 (402)
T ss_pred ----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHH
Confidence 1233333333 34556666666777777777777544 4 3333344567766
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 007405 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 245 ~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (605)
++.++|++.+..||+..|.+.+++.++++++..
T Consensus 355 ~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 355 VGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 666899999999999999988877777655543
No 185
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.99 E-value=2e-08 Score=105.42 Aligned_cols=151 Identities=15% Similarity=0.059 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+...+..++....++++..++|.|+++ .|.+..+.+...+.+.++..++.++.|+++||+-+||+++.++.++..++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 4555555556667777888899999875 799999999999999999999999999999996246667777777777776
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhhH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDR 229 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~r~~ 229 (605)
+.+.+.. .+. .. ...++.|++.+...+...+...+..++ ++ ++.
T Consensus 278 ~~~~~~~---------------------------~~~-~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~------~g~ 322 (355)
T TIGR00896 278 CGLLFAP---------------------------MHG-LW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ------AAA 322 (355)
T ss_pred HHHHHhh---------------------------hhH-HH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH------HHH
Confidence 6665431 111 11 134577999988888877777665554 33 678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~g 257 (605)
.+++.+...+++..++|.+.|++.+.+|
T Consensus 323 ~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 323 LSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888888999999999999998876
No 186
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.98 E-value=2.3e-07 Score=102.79 Aligned_cols=211 Identities=14% Similarity=0.100 Sum_probs=152.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
+.+.++.++....+......+......+-+.+.++++.++.+++.+.+-++..+...+-.+.+-|. =|-+.+-++.+++
T Consensus 94 ~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m 172 (735)
T KOG3626|consen 94 NIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLM 172 (735)
T ss_pred CcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHH
Confidence 334444444444444444447777788888999999999999999999999999999999999986 7778888999999
Q ss_pred HHHHHHHHHhhhcccc-------------CC----CCCccccccc----ccCCCC--Cccch-hHHHHHHHHHHHHHhhc
Q 007405 147 LAGLTGITLCATMKVF-------------MP----NQDNCDRISQ----LLGSCE--PAKSW-QMLYLYTVLYITGFGAA 202 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~-------------~~----~~~~c~~~~~----~~~~~~--~~~~~-~~~~~~~~~~l~g~g~g 202 (605)
.+|.+++++-.+...- .+ ..+.|++..+ ..++|+ ..... -+.+++++.++.|+|..
T Consensus 173 ~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 173 GLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 9999998875322100 00 0011121111 122332 12212 23467788899999999
Q ss_pred ccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh------------------hhc-hHHHHH
Q 007405 203 GIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM------------------EHG-WGSAFG 263 (605)
Q Consensus 203 ~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~------------------~~g-w~~~f~ 263 (605)
.+++...+++=|....++ -...+++++....+|+++|.++++++.. +.| |+..|+
T Consensus 253 pi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred CCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 999999999999888887 7889999999999999999999987642 134 888999
Q ss_pred HHHHHHHHHHHHHHHhccccc
Q 007405 264 ALAIAMGISNMLFFIGTPLYR 284 (605)
Q Consensus 264 ~~~~~~~i~~~~~~~~~~~~~ 284 (605)
+.+.+.++..+.++++.++.+
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCc
Confidence 999888888777766555443
No 187
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=1.8e-08 Score=122.30 Aligned_cols=163 Identities=10% Similarity=-0.018 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh-HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA-DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
++..++..++.....+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHH
Confidence 34444444444455556677889999999999999 999999999999999999999999997 9999888888877777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+++.+. .+.+.++++.++.|++.++..+...+++.+.+|++. |++
T Consensus 313 ~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~ 358 (1146)
T PRK08633 313 LFLLPTA----------------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGK 358 (1146)
T ss_pred HHHHHHh----------------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhh
Confidence 7666654 345666677788899999988889999999999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hchHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIA 268 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~-~gw~~~f~~~~~~ 268 (605)
++++.++..++|..+++.+++.+... +++...|++.+.+
T Consensus 359 ~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 359 VLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99999999999998888777766542 3455555554443
No 188
>PRK10133 L-fucose transporter; Provisional
Probab=98.97 E-value=2.9e-08 Score=107.40 Aligned_cols=162 Identities=10% Similarity=0.014 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~ 152 (605)
..+..++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ |||+++..+.++..++...
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 34444555566666677888896 567899999999999999999999999999999997 9999998887776655544
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHH
Q 007405 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (605)
Q Consensus 153 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~ 232 (605)
..+. .+. ..+....+.|++.+...|...+...+.++++. +.+.+
T Consensus 342 ~~~~----------------------------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~ 385 (438)
T PRK10133 342 SAFA----------------------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSS 385 (438)
T ss_pred HHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchh
Confidence 4432 111 22345677899999999999999999987643 33333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHH
Q 007405 233 FFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISN 273 (605)
Q Consensus 233 ~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~ 273 (605)
+... ..+|+.++|.+.|++.+..| -+..|++..+..++..
T Consensus 386 l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 386 FIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 3333 33678888899999999887 6778876655544333
No 189
>PRK10054 putative transporter; Provisional
Probab=98.97 E-value=1.5e-08 Score=108.21 Aligned_cols=172 Identities=12% Similarity=-0.006 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
++...+..++..+.+.....+.+.|+... .+.+....+.....+.+......++.|++.||+ |||+.+.++.++..+
T Consensus 208 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~ 286 (395)
T PRK10054 208 LLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVI 286 (395)
T ss_pred ehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHH
Confidence 33444445555555445555667777544 344555566777777666667778889999997 999999999888887
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
+.....+.. .+.+.+.++.++.++|.+...|...+.+.+..|++. |+
T Consensus 287 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~ 333 (395)
T PRK10054 287 GLVGFIFSG---------------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KA 333 (395)
T ss_pred HHHHHHHcc---------------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ce
Confidence 776665431 245556667788899988888888889999999888 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (605)
+.++... ...+|..+||.++|++.|+.|....|++.+.+..++.++..
T Consensus 334 ~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 334 SYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred ehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 8877644 56689999999999999999988888776665555444433
No 190
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.97 E-value=2.3e-08 Score=106.94 Aligned_cols=154 Identities=11% Similarity=0.019 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
....++|.|+++..+ ++.+.++..+...++...+....+++.||.++.++.+..+.++..++..++...
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~---------- 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---------- 294 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh----------
Confidence 345567888877666 667777777776665554444445665543376777777777777776666554
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.+...+++...+.+++.+...|...+++.|..|+++ |++.+++++...++|..+||
T Consensus 295 ------------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~ 350 (400)
T PRK11646 295 ------------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGY 350 (400)
T ss_pred ------------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcc
Confidence 244455556677788888888888999999999998 99999999999999999999
Q ss_pred HHHHHHHhhhc----hHHHHHHHHHHHHHHHHH
Q 007405 247 TLVVYIQMEHG----WGSAFGALAIAMGISNML 275 (605)
Q Consensus 247 ~i~~~l~~~~g----w~~~f~~~~~~~~i~~~~ 275 (605)
.++|++.+..+ ....+++.++..++..+.
T Consensus 351 ~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 351 IGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred cchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 99999988642 244555444444444433
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.96 E-value=6.2e-08 Score=102.41 Aligned_cols=160 Identities=13% Similarity=0.079 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~ 151 (605)
+...+...+....++....+.+.|+.+++|.++.+.+.+.....++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~ 287 (385)
T TIGR00710 209 WGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAV 287 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHH
Confidence 3344444444555566777788899889999999999999999999999999999999997 999999888877777766
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHH
Q 007405 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (605)
Q Consensus 152 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~ 231 (605)
++...... +. .....+++..++.|++.+...+.......|.+| ++ |++..
T Consensus 288 ~~~~~~~~----~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 337 (385)
T TIGR00710 288 LLEITAIL----GL-------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTAS 337 (385)
T ss_pred HHHHHHHh----cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHH
Confidence 66543210 00 123344555667888888888888888888876 45 78888
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHhhhchHHHHH
Q 007405 232 NFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFG 263 (605)
Q Consensus 232 ~~~~~~~~i-g~~i~p~i~~~l~~~~gw~~~f~ 263 (605)
++++..... |+..+|. .+.+.+..+|...+.
T Consensus 338 ~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~ 369 (385)
T TIGR00710 338 ALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLS 369 (385)
T ss_pred HHHHHHHHHHHHHHHHH-HHhccccChHHHHHH
Confidence 887776544 5555554 445555444544443
No 192
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.94 E-value=1.5e-07 Score=101.50 Aligned_cols=164 Identities=14% Similarity=0.038 Sum_probs=118.6
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc--cc--hHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY--LG--RYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~--~G--R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (605)
.....|+++++|+++++.....+...+-.. .-|+.|.++|.+ +| ||+-++++.++..++...+++... .
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~---~--- 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA---S--- 82 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc---c---
Confidence 345668899999999998876666555444 456789999986 45 555566677666555555544311 0
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 007405 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (605)
Q Consensus 166 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~ 245 (605)
..+.....+..++..+|.+....+..++..|....+... |+...++.+....+|+.++
T Consensus 83 ------------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~ 140 (433)
T PF03092_consen 83 ------------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVG 140 (433)
T ss_pred ------------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHH
Confidence 023344555667788888888899999999988655422 7888889899999999999
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 246 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 246 p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
..++|.+.+..++++.|.+.+++..+..+..+...++
T Consensus 141 ~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 141 SLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999988877766665555554444
No 193
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.91 E-value=7.4e-08 Score=101.72 Aligned_cols=165 Identities=10% Similarity=-0.042 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchH---HHHHH-HHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY---WTIAI-FTTI 145 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~---~~~~~-~~~~ 145 (605)
.+|.+.+..++....+|++..|+|.|+++ .|++.. ++....+..+...+ ..++++||. .|| +.... ..++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~---g~~~~~d~~-~r~~~r~~~~~~~~~~ 266 (368)
T TIGR00903 193 DLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLI---GVAVIPDRV-ARAGLRSIYIRAAALL 266 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHH---HHHHhhHHh-hhhhhHHHHHHHHHHH
Confidence 46788888899999999999999999964 678764 45444444444443 357888886 543 33222 3333
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++....... .+....++...+.+++.....+...++.+|.+|++.
T Consensus 267 ~a~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~----- 313 (368)
T TIGR00903 267 IAAFFLALAFE----------------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL----- 313 (368)
T ss_pred HHHHHHHHHHc----------------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh-----
Confidence 33222222221 122233334455666677777778899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
|+++.++.+...++|+.++|.+.+.+.. |-...|.+.++..+++.+..
T Consensus 314 -rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 314 -HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred -cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887773 55666766666655555443
No 194
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.90 E-value=2e-08 Score=100.98 Aligned_cols=174 Identities=10% Similarity=0.062 Sum_probs=114.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCChhHHH--HHHHHHHHHHHHhhhHHHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNM-----------------VTFMFYVMHKSFADSS--NAVNNFLGISQASSVLGGFL 128 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l-----------------~~yl~~~~~~s~~~~~--~~~~~~~~~~~~~~~~~G~l 128 (605)
++..+....+.|.+.+.||++.-.. +.++....+-...... .=+.+..+...-+.++.+++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 3456677788888899999875422 2222222221211111 11233456677888999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhh
Q 007405 129 ADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 208 (605)
Q Consensus 129 aD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 208 (605)
.||+ |||+++..+.+++.++++++..+-. ++ .-..+++.+|+++.. ...+.
T Consensus 405 verl-GRKkTMal~l~~f~iflfll~~c~~-----------------------rn-~~tvllf~arafisg----~fqva 455 (528)
T KOG0253|consen 405 VERL-GRKKTMALSLILFGIFLFLLTTCKT-----------------------RN-AYTVLLFTARAFISG----AFQVA 455 (528)
T ss_pred HHHh-cchhHHHHHHHHHHHHHHHHHHhcC-----------------------cc-hhHHHHHHHHHHHhc----hheEE
Confidence 9996 9999999999999998888776411 11 223455566765543 34567
Q ss_pred hhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q 007405 209 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 209 ~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
+.+..|.+|+.. |+++.|.......+|+++.|.++ +...-+-..+..+.+.+.+++.++..+
T Consensus 456 YvYtPEVyPTav------RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcf 517 (528)
T KOG0253|consen 456 YVYTPEVYPTAV------RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCF 517 (528)
T ss_pred EEecCcccchhh------hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHhee
Confidence 789999999999 99999999999999999999998 332223333444455555555554443
No 195
>PRK09848 glucuronide transporter; Provisional
Probab=98.89 E-value=3.3e-08 Score=107.39 Aligned_cols=161 Identities=14% Similarity=0.113 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++...+..++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..++.
T Consensus 230 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~ 308 (448)
T PRK09848 230 LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGY 308 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 55566666666676666666677788888888776655555544566778899999999997 99999999998888887
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhhhH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLDR 229 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~r~~ 229 (605)
+.+.+. +. .+.+.+++..++.|+|.+...+...++.+|..|.++.++ ...++.
T Consensus 309 ~~~~~~-------~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~ 362 (448)
T PRK09848 309 LLFFWV-------SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGL 362 (448)
T ss_pred HHHHHc-------Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhH
Confidence 766543 11 345566677788999999999999999999988654211 112588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
.++++++...+|..+|+.+.+.+.+..||
T Consensus 363 ~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 363 TYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899999999999999999887665554
No 196
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.89 E-value=1.3e-07 Score=101.38 Aligned_cols=196 Identities=14% Similarity=0.069 Sum_probs=133.0
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~ 143 (605)
++..++..+..+...++..+.......+..+.+-+.-|++..++.++.........+..+++.++.||+ |||+.++++.
T Consensus 264 ~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~ 342 (485)
T KOG0569|consen 264 NPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISL 342 (485)
T ss_pred CcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHH
Confidence 344455566777777777666544455566677778899999999999999999999999999999997 9999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhc-ccchhhhhhhhccCCCCCch
Q 007405 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAA-GIRPCVSSFGADQFDERSKD 222 (605)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~d~~~~~~~~ 222 (605)
.+..+..+++...........+ .-....+++.++..++.+ +..|...-+.+|.||++.
T Consensus 343 ~~~~~~~~~~~~~~~l~~~~~~-------------------~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~-- 401 (485)
T KOG0569|consen 343 SLMAVALLLMSIALFLSNSFGS-------------------WLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA-- 401 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh-------------------HHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc--
Confidence 9888888777665332100000 001112333333333333 235677788899999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 007405 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (605)
Q Consensus 223 ~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 286 (605)
|..++++.....-+...+-.+.--.+.+..|- ..|.+..+..++..+..+...|+.|.+
T Consensus 402 ----R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 402 ----RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 99999987776666555555555556666664 556666666666666666666666544
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.87 E-value=4.7e-08 Score=118.61 Aligned_cols=183 Identities=6% Similarity=-0.175 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++...+..++..+.++++.+++|.|+.+.+|.+..+++++.+.+.++..++.++.|+++|++ ++++.+.++.++..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 305 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFG 305 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHH
Confidence 55555655666666677788999999999999999999999999999999999999999986 76666665555555444
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+.+.+.... ...+....+ ...+... ..+.+.++++.++.|++.+...+...+++.+.+|++. |++.
T Consensus 306 ~~l~~~~~~-~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v 371 (1140)
T PRK06814 306 LDLAFASSS-VPAEPAQLK------SILVFLS-KRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARV 371 (1140)
T ss_pred HHHHhcccc-ccccccccc------chhhhhc-ccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceee
Confidence 433331000 000000000 0000000 0234566677788899999999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hhchHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIA 268 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~-~~gw~~~f~~~~~~ 268 (605)
+++.++...+|..+++++++.+.+ ..++...|++.+++
T Consensus 372 ~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 372 IAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 999999999999999999998874 34566665554443
No 198
>TIGR00898 2A0119 cation transport protein.
Probab=98.87 E-value=4.4e-08 Score=108.04 Aligned_cols=131 Identities=14% Similarity=0.047 Sum_probs=96.4
Q ss_pred HHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHH
Q 007405 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (605)
Q Consensus 112 ~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 191 (605)
....+...++.+++++++||+ |||+++.++.++..++.+++.+... ......+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~--------------------------~~~~~~~ 414 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV--------------------------DLYFLRT 414 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC--------------------------CchHHHH
Confidence 344556677888999999997 9999999998887777766655311 1123333
Q ss_pred HHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 007405 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (605)
Q Consensus 192 ~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i 271 (605)
+..++.+++.++..+....+.+|.+|++. |++++++.+....+|+.++|.+.+ +. ..++..++++.++..++
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~ 486 (505)
T TIGR00898 415 ALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALL 486 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHH
Confidence 44455566666677888899999999998 999999999999999999999988 43 34566677776666655
Q ss_pred HHHHHH
Q 007405 272 SNMLFF 277 (605)
Q Consensus 272 ~~~~~~ 277 (605)
+.++.+
T Consensus 487 ~~~~~~ 492 (505)
T TIGR00898 487 AGILTL 492 (505)
T ss_pred HHHHHH
Confidence 544443
No 199
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.84 E-value=2.4e-07 Score=98.86 Aligned_cols=158 Identities=6% Similarity=-0.072 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007405 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (605)
Q Consensus 83 ~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (605)
.........++.|+++.+|.++.+.+.+.....++..++.++.+++.||. ++++++..+..+ .+....+...
T Consensus 219 ~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~------ 290 (393)
T PRK11195 219 GAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ------ 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH------
Confidence 33344555667888889999999999999999999999999999999997 988888777533 2232222222
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHH
Q 007405 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (605)
Q Consensus 163 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 242 (605)
.+.+...+..++.|++.+...+...+.+.+..|++. ++++.+++.++..++|.
T Consensus 291 ----------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 291 ----------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAM 343 (393)
T ss_pred ----------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHH
Confidence 344555566678899988888888888877644432 16889999999999999
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 243 IVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 243 ~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
.++..+.+.+ +..|-++.+++.++..++.+.+.
T Consensus 344 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 344 LLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999888855 56676666666555544444443
No 200
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.84 E-value=1.3e-07 Score=102.02 Aligned_cols=161 Identities=14% Similarity=0.110 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.....++..++..++........+.|.+..+|.+ ...+....+..+...++.++.++++||+ |+|+++.++.++..++
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALG 303 (428)
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHH
Confidence 4667777778877887777777888888888877 4566777788889999999999999997 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~r~ 228 (605)
.+...+... .+.+.+++..++.|++.+...+...++++|..+.++.++ +...+
T Consensus 304 ~~~~~~~~~--------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g 357 (428)
T PF13347_consen 304 FLLLFFLGP--------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREG 357 (428)
T ss_pred HHHHHHHHh--------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchH
Confidence 888777521 367788888899999999999999999999998654221 12257
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
..++.+.+...++.++++.+.+.+.+..|+
T Consensus 358 ~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 358 MYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 788889999999999999999988765554
No 201
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.81 E-value=4.5e-08 Score=106.89 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccc--hHHHHHHHHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG--RYWTIAIFTTIY 146 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--R~~~~~~~~~~~ 146 (605)
+.++.......+..++++.-..+++.|.. ..+.+..+++.++++..+...++.++.|+++|+. . ++.+..+++++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 45777778888888888888888898887 8999999999999999999999999999999986 6 344444555555
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.++.+.++++ .+.+.++..-++.|+..|......+..+.|..+.++
T Consensus 376 gl~~~~~p~~----------------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------ 421 (509)
T KOG2504|consen 376 GLARLFLPFA----------------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------ 421 (509)
T ss_pred HHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------
Confidence 5555455544 456777777788999999998888889999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhc
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
-..++++......++..+||.++|++.|.+| |...|+..++..+++.++++...
T Consensus 422 l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 422 LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999999999999888 99999999988887776655443
No 202
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.81 E-value=1.1e-07 Score=99.74 Aligned_cols=145 Identities=10% Similarity=0.033 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH-HHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
..+..++..++...+++...++++.|+.+ +|++..+.+.+..... ++..++.+++|+++||+ |||+.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 35556666666778888888999999987 9999999988777655 56788999999999997 999999888887776
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~ 228 (605)
+.....+.... ...+ + .+..+.+.+..+.++.+++.+...+...++..|.+|++. |+
T Consensus 288 ~~~~~~~~~~~--~~~~------------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g 344 (356)
T TIGR00901 288 TNAGFVWLASN--GHHD------------G---ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GA 344 (356)
T ss_pred HHHHHHHHHhc--Cccc------------c---cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cH
Confidence 65544432110 0000 0 000134556667778899999999999999999999999 99
Q ss_pred HHHHHHHHHHH
Q 007405 229 RFFNFFYLSVT 239 (605)
Q Consensus 229 ~~~~~~~~~~~ 239 (605)
+.+++++...+
T Consensus 345 ~~~g~~~~~~~ 355 (356)
T TIGR00901 345 TQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHh
Confidence 99999777654
No 203
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.79 E-value=2.9e-08 Score=103.26 Aligned_cols=142 Identities=19% Similarity=0.240 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 007405 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKS-FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (605)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~ 151 (605)
..+...++..+.++....+++.|+.+.+|.+ ..+.+...+...+...++.++.|+++||+ |+++...+......++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 288 (352)
T PF07690_consen 210 ILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGAL 288 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHH
Confidence 3444445555566678888999999999999 78999999999999999999999999997 988888887777776666
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHH
Q 007405 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (605)
Q Consensus 152 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~ 231 (605)
.+.+.... .+....++..++.|++.+...+...++..|.+|+++ |++..
T Consensus 289 ~~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 337 (352)
T PF07690_consen 289 GLLLLPFS-------------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAF 337 (352)
T ss_dssp HHCCSHHH-------------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHH
T ss_pred HHHHHHHh-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 65543210 244556667788999999999999999999999998 99999
Q ss_pred HHHHHHHHHHHHHHH
Q 007405 232 NFFYLSVTVGAIVAF 246 (605)
Q Consensus 232 ~~~~~~~~ig~~i~p 246 (605)
++.+...++|..+||
T Consensus 338 g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 338 GLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC
Confidence 999999999999987
No 204
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.77 E-value=1.7e-06 Score=88.23 Aligned_cols=157 Identities=17% Similarity=0.120 Sum_probs=110.6
Q ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccccc
Q 007405 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQ 174 (605)
Q Consensus 95 yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 174 (605)
.+-+.+|++..+.+.+.....+...+..++.|.++||+ |||+..++..+++.++.+.--.
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~------------------- 118 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS------------------- 118 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc-------------------
Confidence 34467999999999888888888999999999999997 9999999999998887754332
Q ss_pred ccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 007405 175 LLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY-LSVTVGAIVAFTLVVYIQ 253 (605)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~-~~~~ig~~i~p~i~~~l~ 253 (605)
.+...++++|++-|++......+..+.......++.-+ ..-.+.-++... +...+-++++..++.++.
T Consensus 119 ----------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 119 ----------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred ----------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 47889999999999999998888887764333322211 001333343333 223344455555666777
Q ss_pred hhhch--HHHHHHHHHHHHHHHHHHHHhccc
Q 007405 254 MEHGW--GSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 254 ~~~gw--~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
+..+. ..+|....++.+++.++....+++
T Consensus 188 ~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 188 DWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 76654 678888877777766665544443
No 205
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.76 E-value=7.4e-07 Score=90.20 Aligned_cols=164 Identities=15% Similarity=0.121 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.|.+.+..-++++.+|.+..|+|.++. +.|+|..++++.++...+......+.+-.+++|.--+|+.......++.+|.
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~ 288 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGL 288 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 566666677788999999999999985 6799999999999999999999999999999987678888888888999998
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
..+.+. |. +.+ .+. .+++|+|.|+..+..-.++.+..++.+. -++.
T Consensus 289 ~G~~~~-------P~-------------------~~~-~lw--~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~L 334 (395)
T COG2807 289 VGLLLA-------PG-------------------QLP-ILW--ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAAL 334 (395)
T ss_pred HHHHHh-------hh-------------------hHH-HHH--HHHHhCccchHHHHHHHHHHhhcCChHH-----HHHH
Confidence 888765 11 222 222 4789999999999999999988765441 3444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc-hHHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAM 269 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~g-w~~~f~~~~~~~ 269 (605)
.++.+-...+=+.+||.+.|++.|..| |....+..+...
T Consensus 335 SgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 335 SGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred HHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 445555556667889999999999876 887766554443
No 206
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.75 E-value=9.3e-07 Score=93.36 Aligned_cols=147 Identities=10% Similarity=-0.089 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 007405 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (605)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~ 151 (605)
+...+..++.....+....+.+.|+.+.+|+++.+.+.......++..++.+++|+++||+ |||+++.++.++..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3344444454555556666777888888999999999999999999999999999999997 999999988876544333
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHH
Q 007405 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (605)
Q Consensus 152 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~ 231 (605)
........ + .+.+.+.++..+.+.+.+...+.......|..| +. +++..
T Consensus 276 ~~~~~~~~----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 324 (377)
T PRK11102 276 WLVVSALL----D--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTAS 324 (377)
T ss_pred HHHHHHHH----h--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHH
Confidence 32221100 0 123334444444444555555555666777766 55 77777
Q ss_pred HHHHH-HHHHHHHHHHHHHH
Q 007405 232 NFFYL-SVTVGAIVAFTLVV 250 (605)
Q Consensus 232 ~~~~~-~~~ig~~i~p~i~~ 250 (605)
++.+. ...+|+.+++.+++
T Consensus 325 ~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 77555 34566777766544
No 207
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.75 E-value=8.9e-07 Score=94.23 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 007405 86 FGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (605)
Q Consensus 86 ~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~ 156 (605)
.....+.+.|+.+++|++..+.+.......++..++.++.|++.||+ |||+++.++.++..++.+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567788889999999999888889999999999999999997 99999999988888877776654
No 208
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.74 E-value=9.8e-07 Score=93.94 Aligned_cols=179 Identities=9% Similarity=0.012 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
++..++..++...+.-....+...|+++.-|.+....+...++..+.-.+.-.+.+++-.|+ |-+++++++.+.+++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 33444455555555555677888898766557777777777777778888888999999997 99999999999888877
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
.+.+.... |. .......+++..+.|+..+....+...++.+..|++. |.++
T Consensus 288 ~l~a~~~~-----~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~ 338 (400)
T PF03825_consen 288 LLYAYFSD-----PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATA 338 (400)
T ss_pred HHHHHhcC-----Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHH
Confidence 66665411 00 0111223334567999999999999999999999999 9999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHhhhchH------HHHHHHHHHHHHHHHHHHHh
Q 007405 231 FNFFYL-SVTVGAIVAFTLVVYIQMEHGWG------SAFGALAIAMGISNMLFFIG 279 (605)
Q Consensus 231 ~~~~~~-~~~ig~~i~p~i~~~l~~~~gw~------~~f~~~~~~~~i~~~~~~~~ 279 (605)
.+++.. ...+|..+|..++|++.+.+|-+ ..+.+.++..++..+++...
T Consensus 339 Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 339 QGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999777 57899999999999999987643 34444555444554444443
No 209
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.74 E-value=1.7e-07 Score=101.21 Aligned_cols=176 Identities=13% Similarity=0.101 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccc-------hHHHHH-H
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-------RYWTIA-I 141 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-------R~~~~~-~ 141 (605)
.+|.+.+..++...+++.+..++|.|+.+.+|++..+.|+..++-.+...+..+++|.++|+... +||.+- +
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i 338 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTI 338 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhH
Confidence 58999999999999999999999999999999999999999999999999999999999998722 112211 1
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 007405 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (605)
+.....++++.+++. + |. .. ......+.++..+.|+..++..-+ ..|. .++.
T Consensus 339 ~~~~~ai~l~~l~~~-------~----~~----------~~-~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~-apq~- 390 (466)
T KOG2532|consen 339 AFGGPAVFLLVLAFT-------S----DE----------HR-LLAVILLTIAIGLSGFNISGFYKN----HQDI-APQH- 390 (466)
T ss_pred HHHHHHHHHHeeeec-------C----CC----------cc-hHHHHHHHHHHHHcccchhhhHhh----hhhc-cchH-
Confidence 222222222222221 1 10 00 011122222222233333332222 1222 3344
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---hhchHHHHHHHHHHHHHHHHHHHH
Q 007405 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---EHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 222 ~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~---~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
-+..+++.+...++.+.++|.+.+.+.. ...|+++|++.+++.+++.+.+.+
T Consensus 391 -----a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 391 -----AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 6889999999999999999999999883 236999999999888887766544
No 210
>PRK11043 putative transporter; Provisional
Probab=98.72 E-value=1.5e-06 Score=92.81 Aligned_cols=148 Identities=12% Similarity=-0.001 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (605)
Q Consensus 80 ~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~ 159 (605)
+....++....+.|.|++ ++|++..+.++......++..++..+++++.||+ |||+.+....++..++.+.+.+....
T Consensus 214 ~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL 291 (401)
T ss_pred HHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334445556667777775 5899999999877777888888999999999997 99998776666555554433322110
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHH
Q 007405 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (605)
Q Consensus 160 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ 239 (605)
.. .+...++++..+.|++.+...+...+...|..| ++ |+++.++++....
T Consensus 292 ----~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~ 341 (401)
T PRK11043 292 ----SH-------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQL 341 (401)
T ss_pred ----cc-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHH
Confidence 00 233444555667788888888888887777776 45 8999999888777
Q ss_pred HHHHHHHHHHHHHHhhhchH
Q 007405 240 VGAIVAFTLVVYIQMEHGWG 259 (605)
Q Consensus 240 ig~~i~p~i~~~l~~~~gw~ 259 (605)
.++.+++.+.+.+.+.....
T Consensus 342 ~~~~~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 342 GLCFLASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHHHHHccCCChhH
Confidence 78888888888887643333
No 211
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.67 E-value=3e-09 Score=117.03 Aligned_cols=201 Identities=14% Similarity=0.087 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 007405 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (605)
Q Consensus 75 ~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~ 154 (605)
.+..+++ +..++......+-+.+.|+++.++++++.+.+-++..+..++..+..+|. -|-|.+-++.++..+|.++++
T Consensus 9 ~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 9 CLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHh
Confidence 3334444 55666666677788999999999999999999999999999999999985 677788889999999999988
Q ss_pred HhhhccccC-CC------------CCcc-----cccccccCCC----CCccchhHHHHHHHHHHHHHhhcccchhhhhhh
Q 007405 155 LCATMKVFM-PN------------QDNC-----DRISQLLGSC----EPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFG 212 (605)
Q Consensus 155 ~~~~~~~~~-~~------------~~~c-----~~~~~~~~~~----~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 212 (605)
+-.+...-. +. .+.| ...+.+...| ++....-+..++++.++.|+|....++...+++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 754332110 00 1112 0000011111 122222346788899999999999999999999
Q ss_pred hccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------hhc-hHHHHHHHHHHHH
Q 007405 213 ADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---------------------EHG-WGSAFGALAIAMG 270 (605)
Q Consensus 213 ~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~---------------------~~g-w~~~f~~~~~~~~ 270 (605)
=|..+++. -...+++++....+|.++|.++++.+.. +.| |+..|.+.+++.+
T Consensus 167 DDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~ 240 (539)
T PF03137_consen 167 DDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLF 240 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 99999988 7888999999999999999988875431 124 8888988888776
Q ss_pred HHHHHHHHhcccc
Q 007405 271 ISNMLFFIGTPLY 283 (605)
Q Consensus 271 i~~~~~~~~~~~~ 283 (605)
+..+.++.+.++.
T Consensus 241 l~aipl~~FPk~l 253 (539)
T PF03137_consen 241 LSAIPLFFFPKKL 253 (539)
T ss_dssp -------------
T ss_pred HHHHHHHcCCccC
Confidence 6666555544444
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=98.65 E-value=9.3e-07 Score=95.89 Aligned_cols=159 Identities=12% Similarity=0.041 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.+.+++..++...+...... +..|. +..++ +....+.......+...++.+++++++||+ |||+.+.++.++..++
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhh-hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 33444444444444322223 33443 33333 233334455556677778889999999997 9999999887766554
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLD 228 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~r~ 228 (605)
.....+. ++ .+.+.+++..++.|++.++..+...++++|..|.++.++ +...+
T Consensus 308 ~~~~~~~-------~~-------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g 361 (444)
T PRK09669 308 SALIFFI-------PP-------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDG 361 (444)
T ss_pred HHHHHHh-------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcch
Confidence 3333221 11 355666777788999999999999999999987543211 11145
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 229 ~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
..++.+.++..+|.++|+.++|++.+..|+
T Consensus 362 ~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 362 LVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 677888889999999999999998876665
No 213
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.64 E-value=1.4e-06 Score=93.44 Aligned_cols=161 Identities=9% Similarity=-0.048 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.+...+..++......++.++++.|+.+. .+.+...++...+.+.....++.+++|+++||+ ++|+++.++.++.++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 33444445554444456678889998653 255555566677777788999999999999997 9999988888877776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.++.... .+. ....+.++.|++.+.++|.+.+...+..+++. +..
T Consensus 313 ~ll~~~~----------------------------~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~ 357 (410)
T TIGR00885 313 CLGSIFA----------------------------GGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYG 357 (410)
T ss_pred HHHHHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhh
Confidence 6666653 121 22455667888889999999999999998765 322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh------chHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEH------GWGSAFGALAIAM 269 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~------gw~~~f~~~~~~~ 269 (605)
... ..++ .+|+.+.|.+.|++.|.. +.+..|++..++.
T Consensus 358 s~~-l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 358 AAG-LVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HHH-HHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 222 2222 399999999999999954 4677787765543
No 214
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.62 E-value=9.9e-07 Score=96.52 Aligned_cols=165 Identities=12% Similarity=-0.008 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
|.++..++..++.....+......+.|.+..++ +....+.+.....++..++.++.++++||+ |||++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 456666777777777766665655544444444 455556666666678888999999999997 999999988887776
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhh
Q 007405 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHL 227 (605)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~r 227 (605)
+.+....... .++ .+.+.+++..++.|++.+...+...++++|..|.++-.+ +...
T Consensus 309 ~~~~~~~~~~----~~~-------------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~ 365 (473)
T PRK10429 309 SCGVLLLMGL----AAP-------------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE 365 (473)
T ss_pred HHHHHHHHhc----cCc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch
Confidence 6655543211 011 345566666678899999999999999999977442110 1113
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
+..+++..+..-+|..+++.+.|++.+..|+
T Consensus 366 G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 366 SIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5577788888999999999999998776554
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.58 E-value=4e-06 Score=88.30 Aligned_cols=177 Identities=8% Similarity=0.066 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---ChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHK---SFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
.+|...+........|+..-...+.|.+..++- +....|.+.+.-.+.-++.-.+..++-+|+ |.|+.++++.++.
T Consensus 221 ~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i~ 299 (412)
T PF01306_consen 221 NFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHHH
Confidence 466555554554455555555578888765542 334456777777788888888999999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
++=.++++++ .+++.+.+.+.+.|+-.+.......-++++.+|++-
T Consensus 300 ~iRi~~~~~~----------------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------ 345 (412)
T PF01306_consen 300 AIRIIGSGFA----------------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------ 345 (412)
T ss_dssp HHHHHHHHT------------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------
T ss_pred HHHHHHHhhh----------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------
Confidence 9888888876 577888899999999999999999999999999987
Q ss_pred hhHHHHH-HHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 227 LDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 227 r~~~~~~-~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
..+...+ +..+..+|..+.+.++|++.|+.|++..|++.+.++++..++..+..+
T Consensus 346 sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 346 SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 7788877 456889999999999999999999999998888776655555444443
No 216
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.58 E-value=5.3e-06 Score=87.91 Aligned_cols=121 Identities=12% Similarity=0.235 Sum_probs=92.5
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHH
Q 007405 418 TCHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEF 497 (605)
Q Consensus 418 ~~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~ 497 (605)
.+..++.++...+..|+.+.++=++.++.. .++|..++.-++.|+..+.++...-+|
T Consensus 427 ~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-----------------------~n~W~vLPieilqgit~aliWaa~~sY 483 (618)
T KOG3762|consen 427 FKLIEKIGHVNVMYLGLACNVGRFLYYSYL-----------------------QNPWMVLPIEILQGITHALIWAAIISY 483 (618)
T ss_pred HHHHHHhcccceeeehhhHHHHHHHHHHHh-----------------------cCchheeeHHHHHHHHHHHHHHHHHHH
Confidence 334445555555678888877777777766 467778888899999999999999999
Q ss_pred HHhhcchhHHHHHHHHHH-HHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHH
Q 007405 498 LYEEAPDAMKSIGSAYAA-LAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLY 576 (605)
Q Consensus 498 ~~~~~P~~~rg~~~g~~~-~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~ 576 (605)
+...+|+++|..++|+.. ....+|..+|+++++.+....+ ....|...++.+++.++++..
T Consensus 484 ~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg------------------~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 484 ASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG------------------ARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh------------------hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 4778999999999988766433 245677766666666555554
Q ss_pred HHh
Q 007405 577 SAY 579 (605)
Q Consensus 577 ~~~ 579 (605)
.-+
T Consensus 546 iq~ 548 (618)
T KOG3762|consen 546 IQL 548 (618)
T ss_pred hhh
Confidence 433
No 217
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.57 E-value=5.6e-07 Score=94.51 Aligned_cols=139 Identities=11% Similarity=-0.000 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+...+..++.....+++..+++.|+++.+|.+..+++.....+.+...++.+++|+++||+ |||+.+..+..+..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 44444555555566677888899999999999999999999999999999999999999997 99988888777666665
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
.++.+... ++ .+...+++..++.+++.|...+...++.+|.+| ++ +++.
T Consensus 306 ~~~~~~~~-----~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~ 354 (366)
T TIGR00886 306 FLVVLGLV-----SP-------------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAV 354 (366)
T ss_pred HHHHhcCC-----Cc-------------------chHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccH
Confidence 55554310 00 034444455555666666666777788888887 45 8999
Q ss_pred HHHHHHHHHHH
Q 007405 231 FNFFYLSVTVG 241 (605)
Q Consensus 231 ~~~~~~~~~ig 241 (605)
.++.+...++|
T Consensus 355 ~g~~~~~~~~g 365 (366)
T TIGR00886 355 SGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccCC
Confidence 98887776665
No 218
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.56 E-value=2.6e-06 Score=93.13 Aligned_cols=187 Identities=11% Similarity=0.099 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH----HHHHHHHHHHHHHHhhhHHH----HHhhhccchHHHH--
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD----SSNAVNNFLGISQASSVLGG----FLADAYLGRYWTI-- 139 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~----~~~~~~~~~~~~~~~~~~~G----~laD~~~GR~~~~-- 139 (605)
.++.+++..++....+....+.++.|..+..+.+... .+++.+.-.+...+..|+.. ++.||..+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 3455555555666666667777888887766554222 45555655555555555544 4555421333333
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 007405 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (605)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (605)
.+|+++..++....++..... . .+...+.+++++..++.++|.....|...+++++..|++
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~---~----------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~ 413 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFA---D----------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR 413 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhc---C----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH
Confidence 677888877777766532110 0 001147888899999999999999999999999999999
Q ss_pred CchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 220 ~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
. |++.++++..+..+|..+++.+.....+..+|...|...++.+++..+++++..+
T Consensus 414 ~------~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 414 L------MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999988887777777888887777666655555544433
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.52 E-value=9.3e-06 Score=86.43 Aligned_cols=140 Identities=11% Similarity=-0.066 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
......+.|+++.+|.+..+.++.......+..++.++.+++.||+ ||+... ......++.+....... ...
T Consensus 225 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~----~~~- 296 (394)
T PRK11652 225 VFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGW----FGV- 296 (394)
T ss_pred HHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHH----hcc-
Confidence 3344567788888999999999888888888888888889999986 743332 22222222222211100 000
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.+.+.++++.++.+++.+...+...+...|.+| ++ +++..++.+...++|..+++
T Consensus 297 ------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~lg~~~~~ 351 (394)
T PRK11652 297 ------------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YL------AGTAGALLGGLQNIGSGLAA 351 (394)
T ss_pred ------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc------chHHHHHHHHHHHHHHHHHH
Confidence 234556667788899999888999999989887 35 78888888888899999999
Q ss_pred HHHHHHHhhhchH
Q 007405 247 TLVVYIQMEHGWG 259 (605)
Q Consensus 247 ~i~~~l~~~~gw~ 259 (605)
.+++++.....+.
T Consensus 352 ~~~~~~~~~~~~~ 364 (394)
T PRK11652 352 LLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHccCCchHH
Confidence 9998886654333
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.42 E-value=1.9e-05 Score=77.91 Aligned_cols=156 Identities=12% Similarity=0.104 Sum_probs=105.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~ 146 (605)
+|..+.....++.+.. ..|.+. .....+++.+|+|.+|...+-..-.++..++ ++.|.+.|++ |.+.+++++.+..
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLG 76 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHH
Confidence 3544444444443332 223333 3466789999999999999888888888865 7889999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.+|..++.++..-.. + +...+.+.+..++.|.+.+......-....+.||. +
T Consensus 77 ~~GY~~~~l~~~~~i--~-------------------~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------ 128 (250)
T PF06813_consen 77 FVGYGLLWLAVSGRI--P-------------------SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------ 128 (250)
T ss_pred HHHHHHHHHHHhCcc--C-------------------ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------
Confidence 999998887633110 0 02345555555566666555545545555688984 6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
|++..++.-....+++.+-..+-..+..
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 8999888666666666655544444433
No 221
>PRK11462 putative transporter; Provisional
Probab=98.42 E-value=2.5e-05 Score=85.19 Aligned_cols=158 Identities=9% Similarity=0.016 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 007405 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (605)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~ 152 (605)
.++...++..+...........|.+..+|. ....+.+...+.++..++.+++++++||+ |+|+++..+.++..+..++
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~ 309 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLA 309 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHH
Confidence 333344444444333333334444444553 33345666777888889999999999997 9998877555444333333
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh-hhhHHH
Q 007405 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT-HLDRFF 231 (605)
Q Consensus 153 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~-~r~~~~ 231 (605)
..+. +. .+...+++..++.|++.+...+...++++|..+-++-++-+ .-+..+
T Consensus 310 ~~~~-------~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~ 363 (460)
T PRK11462 310 MFFV-------PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISF 363 (460)
T ss_pred HHHh-------ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHH
Confidence 3221 00 22333344445678887777777788889887743211101 124445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 232 NFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 232 ~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
+...+...+|.++++.+++++.+..|+
T Consensus 364 a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 364 AGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 666678899999999988887665444
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.41 E-value=3e-05 Score=80.48 Aligned_cols=172 Identities=16% Similarity=0.127 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 007405 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (605)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~ 153 (605)
.+...++..++++.=-..+-+|--+.||++..+.+.+...+..+..++..+.|++..|-.+++++..+++.+..++..+.
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 34444555666655556788899999999999999999999999999999999988865589999989998888888877
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHH
Q 007405 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (605)
Q Consensus 154 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~ 233 (605)
.++... .+.+.+..+.+++|++.|.+....-+..-|+..+++ -+.+++.
T Consensus 293 i~a~~~-------------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~ 341 (403)
T PF03209_consen 293 ILAGPL-------------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGA 341 (403)
T ss_pred HHHHhc-------------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHH
Confidence 776431 356788899999999999998888888899998888 7899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----------hchHHHHHHHHHHHHHHHHHH
Q 007405 234 FYLSVTVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 234 ~~~~~~ig~~i~p~i~~~l~~~----------~gw~~~f~~~~~~~~i~~~~~ 276 (605)
+..+-.++.++|..++|.+.|- .+|..+|.+-++..++++.+.
T Consensus 342 WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 342 WGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888877653 246667777776666555543
No 223
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.39 E-value=1.9e-05 Score=79.11 Aligned_cols=142 Identities=21% Similarity=0.268 Sum_probs=107.9
Q ss_pred HHHHHhCCCh--hHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccc
Q 007405 95 FMFYVMHKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (605)
Q Consensus 95 yl~~~~~~s~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 172 (605)
.....++.+. ...++..+.+.+...++.++.|+++||+ |||+.+..+.....++.+.+.+...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-------------- 91 (338)
T COG0477 27 LLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-------------- 91 (338)
T ss_pred HHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--------------
Confidence 3344555554 4778889999999999999999999998 9998888888765555455554310
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhhHHHHHHHH-HHHHHHHHHHHHHH
Q 007405 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLVV 250 (605)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~i~p~i~~ 250 (605)
.....+++.|++.|++.+...+...+++.|.+|. +. |+...+.... ...+|..++|.+++
T Consensus 92 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 92 ------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred ------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2467888889889999999999999999999998 44 8888888777 57888888887777
Q ss_pred HHHhh--hchHHHHHHHHHHH
Q 007405 251 YIQME--HGWGSAFGALAIAM 269 (605)
Q Consensus 251 ~l~~~--~gw~~~f~~~~~~~ 269 (605)
.+... .+|++.|.+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 154 LLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHH
Confidence 66654 56888655554433
No 224
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.36 E-value=0.00018 Score=76.69 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=76.1
Q ss_pred HHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHH
Q 007405 111 VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYL 190 (605)
Q Consensus 111 ~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 190 (605)
..+-.....+..++++.+-|.. |.|+.+.++...+.+..+.... .|.+.+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-----------------------------~N~y~~ 105 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-----------------------------PNSYYL 105 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-----------------------------cchHHH
Confidence 5556667788889999999986 9999999999988877666655 356778
Q ss_pred HHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 007405 191 YTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (605)
Q Consensus 191 ~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~ 245 (605)
+++-.+.|+|.+..+.-...++++..+++. +.+..++.-.....+..+|
T Consensus 106 yfssallG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 106 YFSSALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIG 154 (461)
T ss_pred HHHHHHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhh
Confidence 888899999999999999999999988887 5555555333333333333
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.33 E-value=1.1e-05 Score=85.93 Aligned_cols=160 Identities=14% Similarity=0.048 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
....++..++...++....+.++.|.+..+|.+.............+..++.++..+|++|+ |+|+++.++.++.+++.
T Consensus 238 ~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~ 316 (467)
T COG2211 238 LLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGY 316 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHH
Confidence 45555566676666665666677777878888888888888888888888899999999997 99999999999999999
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh-hhhH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT-HLDR 229 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~-~r~~ 229 (605)
++..+... .+...+++..++.++|.+...+...++++|..+-++-++-+ .-|.
T Consensus 317 ~~~~f~~~--------------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi 370 (467)
T COG2211 317 LLLYFTPA--------------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGI 370 (467)
T ss_pred HHHHhhcC--------------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhh
Confidence 99888621 46778888889999999999999999999998855422211 1244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~g 257 (605)
.++...+..=+|.+++..+.+++....|
T Consensus 371 ~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 371 VYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4555666777788888777777665444
No 226
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.30 E-value=5.4e-05 Score=81.30 Aligned_cols=170 Identities=12% Similarity=0.036 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.++...+..++....++......|.|+++.+|.+..+.++......++..++..+.+.+.++. ++++.+.....+..++
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig 297 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHH
Confidence 355555556666667777777889999999999999999887777777777777777765444 4444443333344444
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+++...... .+ .+....+++.++.++|.+...|+.....-.+. ... +++
T Consensus 298 ~~l~~~~~~~---~~--------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~-~~~------~G~ 347 (413)
T PRK15403 298 LALLIVGNLL---WP--------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSN-NLP------KGT 347 (413)
T ss_pred HHHHHHHHHH---cc--------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHhccC-CCC------CcH
Confidence 4443332100 01 23333566777888888888777775332221 222 567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i 271 (605)
..++++.....+..+++.+++++.+. +-.+.|.+..++..+
T Consensus 348 a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 348 VSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 77777777777788888888888765 556666655544433
No 227
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.30 E-value=1.7e-06 Score=88.38 Aligned_cols=173 Identities=12% Similarity=0.005 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007405 82 RMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKV 161 (605)
Q Consensus 82 ~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (605)
++..-..-+.++.++.+.+..+.-+.+.+..-..+.+.++..+.|.|+||+ +.-+.+....-+.++|......-
T Consensus 283 n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP----- 356 (464)
T KOG3764|consen 283 NSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIP----- 356 (464)
T ss_pred cchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhH-----
Confidence 344444567788889999986555888777778888999999999999998 93333333333333342222211
Q ss_pred cCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHH
Q 007405 162 FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG 241 (605)
Q Consensus 162 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig 241 (605)
.| .++..+++-+...+++.+...+..........+.++..+-.--++..++...+..+|
T Consensus 357 ------~~---------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla 415 (464)
T KOG3764|consen 357 ------FA---------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLA 415 (464)
T ss_pred ------hh---------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHh
Confidence 12 466777777778888888877777777777777665331112678888888999999
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcc
Q 007405 242 AIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (605)
Q Consensus 242 ~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~ 281 (605)
..+||.++|.+.+..|++|.-.+.++.-++...++.+++.
T Consensus 416 ~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 416 YAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred hhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888877776666665555443
No 228
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.28 E-value=3.9e-05 Score=84.54 Aligned_cols=175 Identities=14% Similarity=0.120 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HhCCCh------hHHHHHHHHHHHHHHHhhhHH----HHHhhhccchHHHHHHHHHH
Q 007405 78 EMAERMAYFGLSVNMVTFMFY--VMHKSF------ADSSNAVNNFLGISQASSVLG----GFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~--~~~~s~------~~~~~~~~~~~~~~~~~~~~~----G~laD~~~GR~~~~~~~~~~ 145 (605)
.++....+|.+...++.++.. ..+.+. ...++..+.-.+...+..++. +++.||+ +..+.+.++.++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 335556666666666666543 111211 113444455454555555555 6667775 777888899999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
..++.+.+.+...... .| ...+.+++++..+++|+|.....|...+++.+..|++.
T Consensus 360 ~~l~f~~l~~~~~~~~------~~-------------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~----- 415 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN------DA-------------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL----- 415 (500)
T ss_pred HHHHHHHHHHHHHhcC------CC-------------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH-----
Confidence 9999888776532110 00 01345678888899999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------hhchHHHHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~----------~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
|++.++.+..+..+|..++..+.+.... ..++.+.|...++..++..++++.
T Consensus 416 -rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 416 -MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888887777666643221 123566776666555444433333
No 229
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.24 E-value=5e-05 Score=78.30 Aligned_cols=160 Identities=13% Similarity=0.071 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
.+...+..|+..-+=-.+.++++.|+.+..|.+..+++..++.+..+..++..++-++-.|+ -..|.+.+..++-.+-+
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~ 316 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLL 316 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 33344444443333334567899999988999999999999999999999999999998887 77777766665444433
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
+...+. .+. .-+.+.++.|+..+.+.|.+.+...+..+.+.+ .+++
T Consensus 317 ~~~~l~----------------------------~g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~s~ 362 (422)
T COG0738 317 LAVALI----------------------------GGV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VGSG 362 (422)
T ss_pred HHHHHh----------------------------cCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----ccce
Confidence 344433 232 334455788999999999999999999994431 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~ 268 (605)
.-....+|+++-|.+.|++.|..|-...+......
T Consensus 363 ---~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pll 397 (422)
T COG0738 363 ---LLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLL 397 (422)
T ss_pred ---eeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 22234589999999999999999877776633333
No 230
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.22 E-value=3.3e-05 Score=84.71 Aligned_cols=175 Identities=7% Similarity=0.038 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChh----HHHHHHHHHHHHHHHhhhHHHHHhhhccchHH-------HHHHHHHHH
Q 007405 78 EMAERMAYFGLSVNMVTFMFYVMHKSFA----DSSNAVNNFLGISQASSVLGGFLADAYLGRYW-------TIAIFTTIY 146 (605)
Q Consensus 78 ~~~~~~~~~~~~~~l~~yl~~~~~~s~~----~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~-------~~~~~~~~~ 146 (605)
..+....+......++.|.++..+.+.. ...+..+...+...+..|+.|++.||+ |||+ -+.+++++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 4444555555557778888754333211 223444444455667778889999997 9886 366777777
Q ss_pred HHHHHHHHHhhh-ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 147 LAGLTGITLCAT-MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 147 ~~~~~~~~~~~~-~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
.++.+.++.... ...... ..+.++++...++.|+|.+...+...+++.+..|++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~-------------------~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~----- 412 (489)
T PRK10207 357 SLGFLTAAAAGMWFADAQG-------------------LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL----- 412 (489)
T ss_pred HHHHHHHHHHHHhhcCCCC-------------------ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH-----
Confidence 766654432110 000000 0345667777789999999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------hhchHHHHHHHHHHHHHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~p~i~~~l~~----------~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
++..+++++...++|..+|..++..... ...+.+.|...++..++..++++.
T Consensus 413 -~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 413 -MGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887765521 112445565555554444444444
No 231
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.19 E-value=1e-05 Score=85.73 Aligned_cols=169 Identities=8% Similarity=-0.095 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 007405 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (605)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~ 155 (605)
+..++.......+.+++--++ ++.+-.+.-.|.....-..+-++.-++.++|..++ |+-+++.++++..++=.+.+..
T Consensus 378 ~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~ 455 (618)
T KOG3762|consen 378 FVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSY 455 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHH
Confidence 333344444434455554444 45555555555444445556667778889999997 9999999999988887777666
Q ss_pred hhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHH
Q 007405 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (605)
Q Consensus 156 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~ 235 (605)
. +|+|+.+..-+++|+..+.++.++.+++++..|++- |.++.++..
T Consensus 456 L----------------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~ 501 (618)
T KOG3762|consen 456 L----------------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQ 501 (618)
T ss_pred h----------------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHH
Confidence 5 688888889999999999999999999999999999 899999866
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 236 L-SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 236 ~-~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
. ...+|-.+|.+|+|.+.+.+|-+..|.+.++.+++.++.+....
T Consensus 502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 5 56899999999999999999989899888888777777665543
No 232
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.17 E-value=5.3e-05 Score=66.90 Aligned_cols=113 Identities=17% Similarity=0.274 Sum_probs=82.7
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcc
Q 007405 424 ASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAP 503 (605)
Q Consensus 424 ~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P 503 (605)
.++++.+..+..+..++.+..... .+.+.+....++.+++.+...+....++.+..|
T Consensus 25 ~g~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 25 FGRKPVLLVGLFIFVLSTAMFALS-----------------------SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 344444556666666665554433 245556667788899999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHH
Q 007405 504 DAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYS 577 (605)
Q Consensus 504 ~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~ 577 (605)
++.|+.++++.+....+|..+++.+.+.+.+.. +| +..|++.+++.++..+..+++
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFL--------GW----------RAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc--------ch----------HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999998876422 23 456776666666665555544
No 233
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=1.6e-05 Score=86.32 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIFTTIY 146 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~~~~~~~~~~~ 146 (605)
.+|...+..++.....|++..++|.|+++..|+|..++..+...+.++..++.++.|+++||. +.+|..+.+.+.++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 378888999999999999999999999997779999999999999999999999999999993 26776666666555
Q ss_pred HHHH-HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 007405 147 LAGL-TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (605)
Q Consensus 147 ~~~~-~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (605)
.+.. +.+... .+......+.+....+.....++......+......
T Consensus 354 ~~~g~~~l~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~----- 400 (495)
T KOG2533|consen 354 AIIGAISLLAA----------------------------AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT----- 400 (495)
T ss_pred HHHHHHHHHhh----------------------------ccchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----
Confidence 4433 333322 111222222222333333444455555555555444
Q ss_pred hhhHHHHHHHHHHHHHHHHH-HHHHHHHHhhhchHHHHHHHH
Q 007405 226 HLDRFFNFFYLSVTVGAIVA-FTLVVYIQMEHGWGSAFGALA 266 (605)
Q Consensus 226 ~r~~~~~~~~~~~~ig~~i~-p~i~~~l~~~~gw~~~f~~~~ 266 (605)
+|-+..+....+.+.+++++ ++..+.....++|.+.|++..
T Consensus 401 k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 401 KALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 14444444444444444443 333444555567888885433
No 234
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.11 E-value=0.0002 Score=77.59 Aligned_cols=207 Identities=14% Similarity=-0.032 Sum_probs=142.7
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCChh------H----HHHHHHHHHHHHHHhhhHHHHHhh
Q 007405 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFA------D----SSNAVNNFLGISQASSVLGGFLAD 130 (605)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~~~~s~~------~----~~~~~~~~~~~~~~~~~~~G~laD 130 (605)
+..+.-++.++.++.++++..++++.+..+...|+.+ .++-++. + ..+....+.+...+..++--++.+
T Consensus 251 ~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~ 330 (477)
T TIGR01301 251 GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR 330 (477)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778899999999999999999999999999875 4553321 1 224445555555566667778888
Q ss_pred hccc-hHHHHHHHHHHHHHHHHHHHHhhhccc-cCCCCCcccccccccCC-CCCccchhHHHHHHHHHHHHHhhcccchh
Q 007405 131 AYLG-RYWTIAIFTTIYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGS-CEPAKSWQMLYLYTVLYITGFGAAGIRPC 207 (605)
Q Consensus 131 ~~~G-R~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 207 (605)
++ | ||++..++.++..+++....+....+. ..+. +.+. --+|........++...+.|+..+.....
T Consensus 331 ~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~si 400 (477)
T TIGR01301 331 GW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYY---------DGDGESLPPPTGIKASALIVFAILGIPLAITYSI 400 (477)
T ss_pred Hh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccc---------cccccccCcchhhHHHHHHHHHHhhHHHHHHHHH
Confidence 86 9 577778998888888877765432100 0000 0000 00111112355556667889999999888
Q ss_pred hhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHhccc
Q 007405 208 VSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISNMLFFIGTPL 282 (605)
Q Consensus 208 ~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~g--w~~~f~~~~~~~~i~~~~~~~~~~~ 282 (605)
-.+++++..+++.. +.|..++++|.+..+...+..+..|.+.+..| -.+.+.+.++.++++.+..+...|+
T Consensus 401 Pfal~s~~~~~~~~----~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 401 PFALASIRSSNLGA----GQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred hHHHHHHHccccCC----CCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 89999999986441 16999999999999999999888887665554 4567788888888887777666554
No 235
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.09 E-value=0.005 Score=64.84 Aligned_cols=156 Identities=8% Similarity=-0.010 Sum_probs=109.4
Q ss_pred HHHHHHHHHHH-hCCChhHHH-HHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 89 SVNMVTFMFYV-MHKSFADSS-NAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 89 ~~~l~~yl~~~-~~~s~~~~~-~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
-+++..|++++ .|++..+.. -+.-.+.-......++...+.|.. |-|++++++.+...+...++.+.
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~---------- 91 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG---------- 91 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 46889999997 999998876 444455556666777778999975 99999999888877777776664
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.+...+-+.-++.|++.+. ..+..+++=-..|+++ -.+..++...+.-+|-.++.
T Consensus 92 ------------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~ 146 (412)
T PF01770_consen 92 ------------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISS 146 (412)
T ss_pred ------------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 4677777888888888776 3455566656666655 45555666666667777777
Q ss_pred HHHHHHHh--hhchHHHHHHHHHHHHHHHHHHHHhc
Q 007405 247 TLVVYIQM--EHGWGSAFGALAIAMGISNMLFFIGT 280 (605)
Q Consensus 247 ~i~~~l~~--~~gw~~~f~~~~~~~~i~~~~~~~~~ 280 (605)
+++-.+.. ..++....++......+++++.+++.
T Consensus 147 ~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 147 LLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66665554 33466676777766666666655543
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.99 E-value=3.4e-05 Score=84.21 Aligned_cols=136 Identities=10% Similarity=-0.152 Sum_probs=105.6
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccccccc
Q 007405 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (605)
Q Consensus 97 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 176 (605)
.+.+|+++.+.+.+.....++..++..+.+++.+|+ +.|+++.++.++..++.....+...-...... .
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~g---i------- 348 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFG---I------- 348 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccccC---C-------
Confidence 457999999999999999999999999999999986 99999999999888776554321100000000 0
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (605)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~ 256 (605)
.+...++...++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..
T Consensus 349 --------~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 349 --------SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred --------CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 012233344567788888877888999999999999 999999999999999999999999998877
Q ss_pred c
Q 007405 257 G 257 (605)
Q Consensus 257 g 257 (605)
|
T Consensus 415 g 415 (468)
T TIGR00788 415 G 415 (468)
T ss_pred C
Confidence 6
No 237
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.99 E-value=3.9e-08 Score=106.67 Aligned_cols=188 Identities=14% Similarity=0.087 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
.....+....+..+..+....+...++.+..+.+.. ........+...++.+++.++.||+ |||++++++.++..++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444444433444455556666676666 2222333455566777778999997 9999999998887777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhH
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~ 229 (605)
.+.++.... ..++ ++ ...+...+............+..+....+.+|.||++. |.+
T Consensus 330 ~~~~~~~~~---~~~~--------------~~-~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~ 385 (451)
T PF00083_consen 330 SLILGIIFF---LGVS--------------SS-SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RST 385 (451)
T ss_pred ccccccccc---cccc--------------cc-cccccccceeeeeccccccccccccccccccccccccc------ccc
Confidence 666641000 0000 00 00112121111111112222344566688899999999 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhccccc
Q 007405 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (605)
Q Consensus 230 ~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~ 284 (605)
+.++.+....+++.++|.+..++.+..+-...|.+.+.+.++..+..+...++.+
T Consensus 386 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~ 440 (451)
T PF00083_consen 386 GIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETK 440 (451)
T ss_pred ccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCC
Confidence 9999888888999999888888777666344555555555555555555555544
No 238
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=0.00026 Score=78.38 Aligned_cols=196 Identities=13% Similarity=0.045 Sum_probs=106.1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~ 144 (605)
+..++......+..++..+..+....+....+-+..|.+... .+...+......++..++.++.||+ |||+.++.+.+
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 445555655555555555544444334444445566665433 4444555566677777889999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 007405 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (605)
.+.++.++++..........+ |. .......+....+.+.....+..+....+.+|.||.+.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~---- 428 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPN-------------SS--KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL---- 428 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCC-------------cc--cchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH----
Confidence 999999888865321100000 00 00112222222223333334444566678899999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH-HHHHhcccc
Q 007405 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM-LFFIGTPLY 283 (605)
Q Consensus 225 ~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~-~~~~~~~~~ 283 (605)
|+.+.++......+...+-...--.+.+..++...|.+.+....+... ..+...++.
T Consensus 429 --r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 429 --RSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPET 486 (513)
T ss_pred --HhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccC
Confidence 888888744433222222211222222222234455555554444444 344444544
No 239
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.92 E-value=0.032 Score=58.86 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Q 007405 472 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 533 (605)
Q Consensus 472 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 533 (605)
+.|.+....+..|+-.+..++.....+.+..|++.|..++|.....-.+|..++..+.-.+.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 55555566677788889999999999999999999999999999999999999988876554
No 240
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.91 E-value=2.7e-06 Score=88.79 Aligned_cols=124 Identities=18% Similarity=0.152 Sum_probs=101.1
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHh
Q 007405 421 PRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYE 500 (605)
Q Consensus 421 ~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~ 500 (605)
.+|.++...+++|.++-.++.+..++. ..+|.+++.-.+.|+||....|..++++.+
T Consensus 92 adryNR~~v~~vG~~iW~~Av~~~~fs-----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD 148 (493)
T KOG1330|consen 92 ADRYNRKRVIAVGIFIWTLAVFASGFS-----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIAD 148 (493)
T ss_pred HhhcCcceEEeeHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHhccchhhhcccchhHhhh
Confidence 344455556788888888888777765 356667778889999999999999999999
Q ss_pred hcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 501 EAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 580 (605)
Q Consensus 501 ~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 580 (605)
.+|++.|+++.+++++...+|+.+|-.....+.+.++ .| ++.|++.+++.++..++..++.++
T Consensus 149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-------~W----------r~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-------WW----------RWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-------ce----------EEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999888877766444 25 567899999999998888888765
Q ss_pred ceec
Q 007405 581 YKYR 584 (605)
Q Consensus 581 ~~~~ 584 (605)
-.++
T Consensus 212 P~rg 215 (493)
T KOG1330|consen 212 PERG 215 (493)
T ss_pred cccc
Confidence 5443
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.89 E-value=0.021 Score=61.05 Aligned_cols=192 Identities=10% Similarity=-0.091 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~ 149 (605)
..+.+....++.+..--......+.|+.+.+.-+.--.+..-..-.+...++.+.-|...||. -|.+++..+.++--+.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHH
Confidence 345566666666666655556677788776554444344333444556667777888999997 9999988887765554
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCc-cchhHHHHHHHH-HHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 007405 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPA-KSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (605)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~-~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r 227 (605)
..........- +... .... +......+++.. ++..+..=+..+...++=-|+...=..++...+
T Consensus 82 v~~s~~~~~~l-~~~~-------------~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~L 147 (432)
T PF06963_consen 82 VAASCALFLLL-LSYP-------------SSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGAL 147 (432)
T ss_pred HHHHHHHHHHH-HhCC-------------ccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhH
Confidence 44333221100 0000 0000 001112222222 222222222222223333455432211111224
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q 007405 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 228 ~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~~ 276 (605)
.+..+...-.=-+.-.+||++.|.+.+..|......+.+...+++++.=
T Consensus 148 a~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vE 196 (432)
T PF06963_consen 148 ARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVE 196 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence 4444444444566788999999999988888877777766666666543
No 242
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.87 E-value=0.00012 Score=58.38 Aligned_cols=68 Identities=18% Similarity=-0.009 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
...++...+...+.++++.|+. +.|++..+.+.+.++..+...+++|+.|+++||+ ||++.++....+
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 3444555555567788999987 5999999999999999999999999999999997 888877766554
No 243
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.78 E-value=0.0016 Score=72.10 Aligned_cols=154 Identities=11% Similarity=0.018 Sum_probs=106.3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh---HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHH-H
Q 007405 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-A 140 (605)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~-~ 140 (605)
.+++|.+...+++.++..+.+|.+..+.|......++-+.. ..++....+..+..++..+.|.+.-++ ||.|.. +
T Consensus 306 f~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li 384 (599)
T PF06609_consen 306 FKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLI 384 (599)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHH
Confidence 34456677778888888888998888888888888877653 456777777778888888889998875 876655 4
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 007405 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (605)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (605)
++.++++++..+++... + .|....+...++.|+|.|...........-..|+++
T Consensus 385 ~~~~~~ta~~Gama~~~------~--------------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ 438 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVR------P--------------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED 438 (599)
T ss_pred HHHHHHHHHHHHHHHcc------C--------------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH
Confidence 56555555444444321 1 122233455677888888876666555555566666
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (605)
Q Consensus 221 ~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~ 251 (605)
.+...++....-.+|+.+|..+-..
T Consensus 439 ------ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 439 ------IGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred ------HHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 8888888888888888888766543
No 244
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.67 E-value=0.0011 Score=64.47 Aligned_cols=156 Identities=17% Similarity=0.103 Sum_probs=91.7
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 169 (605)
.....|+-+.+++...+.+.+.-.......++..+.|-|+|+- |||+......+ ..+++.+.-+
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtyci----tYiLsCiTKh----------- 120 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCI----TYILSCITKH----------- 120 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehH----HHHHHHHhhc-----------
Confidence 3445677788888888888776666667777788889999996 99997654444 4444444311
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhh-hhccCCCCCchhhhhhhHHHHH-HHHHHHHHHHHHHH
Q 007405 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSF-GADQFDERSKDYKTHLDRFFNF-FYLSVTVGAIVAFT 247 (605)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~d~~~~~~~~~~~~r~~~~~~-~~~~~~ig~~i~p~ 247 (605)
| ++.-.++++|++-|+..+....+..+. ++|.-+.+.-+ .+=...-++- ..+...+-+.++.+
T Consensus 121 ---S-----------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Fe-qqWls~TFskA~ffgNglvAiiaGl 185 (454)
T KOG4332|consen 121 ---S-----------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFE-QQWLSVTFSKAVFFGNGLVAIIAGL 185 (454)
T ss_pred ---C-----------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCCh-HhhhhHHHHHHHHhhccHHHHHHHH
Confidence 0 345578899999999988877666654 45554333211 0001111111 11223334445555
Q ss_pred HHHHHHhhhc--hHHHHHHHHHHHHHHHHHH
Q 007405 248 LVVYIQMEHG--WGSAFGALAIAMGISNMLF 276 (605)
Q Consensus 248 i~~~l~~~~g--w~~~f~~~~~~~~i~~~~~ 276 (605)
.+..+.+..+ --.+|-..+...+++..+.
T Consensus 186 fgn~lvd~~slGPVAPFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 186 FGNLLVDTFSLGPVAPFDAAACFLAIGMAVI 216 (454)
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHHHHHHH
Confidence 5566666655 3445655544444444433
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.66 E-value=0.017 Score=59.34 Aligned_cols=61 Identities=11% Similarity=0.058 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 474 YWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 474 ~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
...+..|.+.+...-..+.+.+++..+++|++.-|+.|.+.|...++|+..=..+...+.+
T Consensus 370 il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D 430 (510)
T KOG3574|consen 370 ILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLAD 430 (510)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcc
Confidence 3455578888888888889999999999999999999999999888887665555554444
No 246
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.63 E-value=0.0021 Score=58.71 Aligned_cols=106 Identities=15% Similarity=0.217 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHH
Q 007405 109 NAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQML 188 (605)
Q Consensus 109 ~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 188 (605)
..+++......+..++...+.+++ |.|++++++.+.+++-...... .+.+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-----------------------------~~~~ 90 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-----------------------------PNSY 90 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-----------------------------hhHH
Confidence 445555566777778888889986 9999999999988865555433 3567
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 007405 189 YLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (605)
Q Consensus 189 ~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~ 250 (605)
.++.+-.+.|++.+..+.....++.+..+++. |++..+++......+..+|.++.-
T Consensus 91 ~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 91 TLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 78888899999999999999999999887776 777777766666666666655443
No 247
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.62 E-value=0.0001 Score=77.11 Aligned_cols=180 Identities=16% Similarity=0.046 Sum_probs=121.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH--------HHHHHHHHH-HHhhhHHHHHhhhccchHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN--------AVNNFLGIS-QASSVLGGFLADAYLGRYWT 138 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~--------~~~~~~~~~-~~~~~~~G~laD~~~GR~~~ 138 (605)
-+.++.....-|+.-+++|+...+...- -+.+++.+.+... ...+..... ..+-.++.++.|++ |||+.
T Consensus 303 g~~Llgt~~~WFllDiafy~~nL~~s~I-~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~i 380 (538)
T KOG0252|consen 303 GKHLLGTAGTWFLLDIAFYGQNLFQSVI-FSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYI 380 (538)
T ss_pred HHHHHHHHHHHHhhhhhhhccccHHHHH-HHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHH
Confidence 3556667777778888888877654433 3445555443322 112222222 22556677789997 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 007405 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (605)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (605)
-+-+.+++++..+.++..-.. .+ + ....++..-+.+-++.-+..+....+-+|.||+
T Consensus 381 q~~GF~~~~i~~~~~~~~y~~--------------------~~-~--~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa 437 (538)
T KOG0252|consen 381 QLMGFFIMTIFFFVIAGPYNQ--------------------LE-N--TIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPA 437 (538)
T ss_pred HHhhHHHHHHHHHHHcCCccc--------------------cc-c--cCceeehHHHHHHHHhcCCCceeEEeehhhchH
Confidence 999999888877777654110 00 0 111111111233345555556666777999999
Q ss_pred CCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhchHHHHHHHHHHHHHHHHHHHH
Q 007405 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----EHGWGSAFGALAIAMGISNMLFFI 278 (605)
Q Consensus 219 ~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~-----~~gw~~~f~~~~~~~~i~~~~~~~ 278 (605)
+. |++.-++...+.-+|+++|...-.++.+ ..|.+++|++.+.++.+..+..++
T Consensus 438 rv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 438 RV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred HH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 99 9999999999999999999999999998 678899999998888777665544
No 248
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.57 E-value=0.0014 Score=74.24 Aligned_cols=179 Identities=11% Similarity=0.063 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHhhhHHHHHhhhccc--hHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLG--RYWTIAIFTTIY 146 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~G--R~~~~~~~~~~~ 146 (605)
.++...+..++....++++.+++|.|+++.+|+++.+++++.....+ +..++.+++|+++||+ + .|+++.+++++.
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHH
Confidence 46777788888899999999999999999999999999988887665 5688999999999997 7 567777777766
Q ss_pred HHHHHHHHHhhhc------------cc----cCCCCC-ccccccc-cc--------------------------------
Q 007405 147 LAGLTGITLCATM------------KV----FMPNQD-NCDRISQ-LL-------------------------------- 176 (605)
Q Consensus 147 ~~~~~~~~~~~~~------------~~----~~~~~~-~c~~~~~-~~-------------------------------- 176 (605)
+++.++......+ +. ..+... .||.+-. +.
T Consensus 410 ~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~ 489 (633)
T TIGR00805 410 TLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNM 489 (633)
T ss_pred HHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcc
Confidence 6665442210000 00 000001 2321100 00
Q ss_pred -C-----------------CCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHH-H
Q 007405 177 -G-----------------SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL-S 237 (605)
Q Consensus 177 -~-----------------~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~-~ 237 (605)
+ .|++.=...+..+++..++..+..+.........+-...|+++ |.-+.++..+ .
T Consensus 490 ~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~------rs~alg~~~~~~ 563 (633)
T TIGR00805 490 VYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEE------KSLAIGLQWLCM 563 (633)
T ss_pred eecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCccc------chHHhhHHHHHH
Confidence 0 1211111113334444444444444444444556667889998 9999999555 5
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 007405 238 VTVGAIVAFTLVVYIQME 255 (605)
Q Consensus 238 ~~ig~~i~p~i~~~l~~~ 255 (605)
..+|.+-+|++-|++.|.
T Consensus 564 rllg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 564 RVFATIPAPILFGLLIDV 581 (633)
T ss_pred HHhcCCChhHHHhhhhhc
Confidence 677888899999999886
No 249
>PTZ00207 hypothetical protein; Provisional
Probab=97.43 E-value=0.0014 Score=72.74 Aligned_cols=176 Identities=11% Similarity=0.040 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCChhH--HHHHHHHHHHHHHHhhhHHHHHhhhccchHH---------
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVM-HKSFAD--SSNAVNNFLGISQASSVLGGFLADAYLGRYW--------- 137 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~-~~s~~~--~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~--------- 137 (605)
.+|+++...+|..-+-..+.-| .-++.+.+ |.+.++ ....++++.++.+++.+.+|+++. +.-||+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N-~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~-~~~~~~~~~r~prt~ 431 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFN-ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEI-WSQKRRAEDRVPITI 431 (591)
T ss_pred hHHHHHHHHHHhhCchheeeec-HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHH-HHHhhccccccchhH
Confidence 5788888888765554434444 55777788 763332 233789999999999999999983 323333
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 007405 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (605)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (605)
.+.+..+ ..++.+++++.. ....++++-++.|++.|..++...+...|+|.
T Consensus 432 ~l~~~~~-~~~~~lll~~~~----------------------------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg 482 (591)
T PTZ00207 432 ALFIPSV-CIITMLTLFLTL----------------------------PKAALPLPYFIAAFANGFMAATIALVTRTIFA 482 (591)
T ss_pred HHHHHHH-HHHHHHHHHHHC----------------------------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc
Confidence 2223333 445555555431 11468889999999999999999999999999
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHhhh----------c---hHHHHHHHHHHHHHHHHHHHHhcccc
Q 007405 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVA-FTLVVYIQMEH----------G---WGSAFGALAIAMGISNMLFFIGTPLY 283 (605)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~ig~~i~-p~i~~~l~~~~----------g---w~~~f~~~~~~~~i~~~~~~~~~~~~ 283 (605)
++ -++-+++...+..+|+.+- -.+.|.+.|.- | ++..|.+.+...+++.++.....-++
T Consensus 483 -k~------~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 483 -KD------PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred -cc------hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 77 7888888888888887664 45667776431 2 67888888877777776655544433
No 250
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.41 E-value=0.0026 Score=68.10 Aligned_cols=91 Identities=12% Similarity=0.101 Sum_probs=77.1
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHH
Q 007405 419 CHPRGASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFL 498 (605)
Q Consensus 419 ~~~~~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~ 498 (605)
...++.+.++.+.++++..++..++.++. .+++.+.+.-+++|++|+... +...++
T Consensus 84 lLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-----------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI 139 (511)
T TIGR00806 84 LLTDYLRYKPVLVLQALSFVCVWLLLLLG-----------------------TSVWHMQLMEVFYSVTMAARI-AYSSYI 139 (511)
T ss_pred HHHHHhCchHHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 34456666677777777777776666654 467788899999999999999 999999
Q ss_pred HhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Q 007405 499 YEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 533 (605)
Q Consensus 499 ~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 533 (605)
+..+|++.|++++|+++....+|.++++.+.+.+.
T Consensus 140 ~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 140 FSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999843
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.002 Score=66.15 Aligned_cols=152 Identities=14% Similarity=0.078 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccch-HHHHHHHHHHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWTIAIFTTIY 146 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR-~~~~~~~~~~~ 146 (605)
...+..+....+.....|....+...++ .+.+|+++.|.+-+.+.-.+...+.+..-.+..||..|- +-.+..++.+.
T Consensus 260 i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~ 339 (451)
T KOG2615|consen 260 ISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH
Confidence 3566666666666666666666666666 457999999999888888888888888888888887443 33444444444
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 007405 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (605)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (605)
.-..++...+ .....++++..+..+..+...++...++....|+++
T Consensus 340 vP~~llls~~----------------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------ 385 (451)
T KOG2615|consen 340 VPAFLLLSLA----------------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------ 385 (451)
T ss_pred HHHHHHHhcc----------------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------
Confidence 3344444433 345678888889999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 227 r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
|++..+++.....++-.+||+++|.+..
T Consensus 386 rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 386 RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 9999999999999999999999988764
No 252
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.00024 Score=74.33 Aligned_cols=165 Identities=12% Similarity=0.091 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc---cchHHHHHH-HHH
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAI-FTT 144 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~GR~~~~~~-~~~ 144 (605)
+.++.+..+.+...+++-.=.+++++|+. .+|.+..-.+.+-..--+...+.+|+.|..|||. +||||-++. +.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 55666666666666665444567788874 7899888888777777788899999999999985 688776665 456
Q ss_pred HHHHHHHHHHHhhhccccC-CCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 007405 145 IYLAGLTGITLCATMKVFM-PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (605)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (605)
..+++.++...++.+.... +..+ ++.+......++++..+.=+.....+...-++++|....++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~------------~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~--- 175 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNER------------KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA--- 175 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcc------------cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh---
Confidence 6677777777765432111 1100 11222456667777777778888888899999999998777
Q ss_pred hhhhhH-HHHHHHHHHHHHHHHHHHHHHHH
Q 007405 224 KTHLDR-FFNFFYLSVTVGAIVAFTLVVYI 252 (605)
Q Consensus 224 ~~~r~~-~~~~~~~~~~ig~~i~p~i~~~l 252 (605)
+.+ +.+++.+...+|..+|..+++++
T Consensus 176 ---~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 176 ---KKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ---hhhccchhHHHHHHhcceeeeeccccc
Confidence 333 88888889999999988877643
No 253
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.38 E-value=0.32 Score=52.84 Aligned_cols=169 Identities=11% Similarity=0.016 Sum_probs=99.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----hhHHHHHHHHHHHHHHHh-hhHHHHHhhhccchHHHHHH
Q 007405 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKS-----FADSSNAVNNFLGISQAS-SVLGGFLADAYLGRYWTIAI 141 (605)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s-----~~~~~~~~~~~~~~~~~~-~~~~G~laD~~~GR~~~~~~ 141 (605)
++.++...+..++..+.|+.+.+ +.+.+..+ .+...++-+...+...+. .++-+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 44566666666666666554433 45666553 244555555554544444 78899999997 99999988
Q ss_pred HHHHHHHHHHHHHHhhhc--cccCCCCCcccccccccCCCCCccch------hHHHHHHHHHHHHHhhcccch-hhhhhh
Q 007405 142 FTTIYLAGLTGITLCATM--KVFMPNQDNCDRISQLLGSCEPAKSW------QMLYLYTVLYITGFGAAGIRP-CVSSFG 212 (605)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~c~~~~~~~~~~~~~~~~------~~~~~~~~~~l~g~g~g~~~~-~~~~~~ 212 (605)
....+.....+.++...+ ..++|+ ..|++. ..-.+++-. +.|...+.-+...+-...... ...++.
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~-~~~~~~----~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fa 154 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPT-ALADKL----LSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFA 154 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCc-HHHHHH----HhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777766666654221 011111 001000 000000000 011111111122233233333 678899
Q ss_pred hccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 007405 213 ADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (605)
Q Consensus 213 ~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~ 253 (605)
.|.+..++ -.+.+++++.+.|+|..+++.+..++.
T Consensus 155 ndi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 789999999999999999999988876
No 254
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.32 E-value=0.0098 Score=64.94 Aligned_cols=158 Identities=10% Similarity=-0.059 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh----hHHHHHHHHHHHHHHHhhhHHHHHhhhccchH-H-----H
Q 007405 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSF----ADSSNAVNNFLGISQASSVLGGFLADAYLGRY-W-----T 138 (605)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~----~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~-~-----~ 138 (605)
..+..+++...+....+....+.+..|..+..+.+- -..+|..++-.+...+..|+.+++=.|. +|| + .
T Consensus 268 ~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~ 346 (493)
T PRK15462 268 GLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWG 346 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHH
Confidence 344444454444455555555667777765432221 2245555665555666666666664443 321 1 1
Q ss_pred -HHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 007405 139 -IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (605)
Q Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (605)
+.+++++..++...+.++.....- ....+..++++..+++++|.-+..|...+++++..|
T Consensus 347 Kfa~g~~~~g~~f~~l~~~~~~~~~-------------------~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP 407 (493)
T PRK15462 347 KFALGLGLMSAGFCILTLSARWSAM-------------------YGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEI 407 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC-------------------CCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhCh
Confidence 566777777777777665321100 001466778888889999999999999999999999
Q ss_pred CCCchhhhhhhHHHHHHHHH-HHHHHHHHHHHHHHH
Q 007405 218 ERSKDYKTHLDRFFNFFYLS-VTVGAIVAFTLVVYI 252 (605)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~-~~ig~~i~p~i~~~l 252 (605)
++- |+..++.++.. ..+|..++..+++..
T Consensus 408 ~~~------~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 408 PGV------TGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999 99999998763 367766666655544
No 255
>PRK03612 spermidine synthase; Provisional
Probab=96.94 E-value=0.11 Score=57.42 Aligned_cols=158 Identities=13% Similarity=0.103 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHH-HHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-IAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 88 ~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
.-....-.+...+|-+....+.++++|.++..++..++|+++++- -|+.. +-++..+............. +.. .
T Consensus 33 yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll~~~~-~~~-~-- 107 (521)
T PRK03612 33 YELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALILYAAF-AFQ-G-- 107 (521)
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-H--
Confidence 334445556667888888999999999999999999999887543 22221 11111111111111111100 000 0
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
.....++...++.++..|+..|....+..+... ++ -++..+-.|....+|+++|.
T Consensus 108 ------------------~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ntlGa~~G~ 162 (521)
T PRK03612 108 ------------------LSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAADYLGALVGG 162 (521)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhHHhHHHHHHH
Confidence 111122333345677777777776665544322 12 34556677788889999999
Q ss_pred HHHHHHHh-hhch-HHHHHHHHHHHHHHHHH
Q 007405 247 TLVVYIQM-EHGW-GSAFGALAIAMGISNML 275 (605)
Q Consensus 247 ~i~~~l~~-~~gw-~~~f~~~~~~~~i~~~~ 275 (605)
++.+++.- ..|- +..+.+..+-.+++++.
T Consensus 163 l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 163 LAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 98887654 5664 34444333333444333
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.91 E-value=0.043 Score=60.78 Aligned_cols=123 Identities=9% Similarity=0.016 Sum_probs=81.0
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccccccc
Q 007405 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (605)
Q Consensus 97 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 176 (605)
...+|.+.......... .........+.+-|+. |||.....+.++..++.+..++....
T Consensus 345 ~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~~----------------- 403 (521)
T KOG0255|consen 345 VSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPDD----------------- 403 (521)
T ss_pred hhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhcc-----------------
Confidence 34455544433322222 3444445557899997 99999999999999888888875210
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
.......+...+..++.+........+.+|++|+.. |..+.+.......+|++++|.+......
T Consensus 404 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 404 --------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 110112222223333334444455888899999999 9999999999999999999987755544
No 257
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.91 E-value=0.0057 Score=66.18 Aligned_cols=128 Identities=12% Similarity=0.075 Sum_probs=106.5
Q ss_pred HHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHH-HHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 007405 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGG-FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (605)
Q Consensus 91 ~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G-~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 169 (605)
.+..|+...++++..+.+...+.......++.++.. .+.-. +|-|+++..|++...+.....+++
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~------------- 328 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFA------------- 328 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHh-------------
Confidence 346788889999999999999998888888888888 45554 599999999999999999999987
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 007405 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (605)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~ 249 (605)
++.++.+....+.++ .....|...++.+-+.++++ +++.+++....-.+.++++|.+-
T Consensus 329 ---------------~~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~ 386 (463)
T KOG2816|consen 329 ---------------TETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALY 386 (463)
T ss_pred ---------------ccchhhhHHHHHHHh-hcchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHH
Confidence 456777776655444 46678899999999999999 99999999999999999999887
Q ss_pred HHHHh
Q 007405 250 VYIQM 254 (605)
Q Consensus 250 ~~l~~ 254 (605)
+.+..
T Consensus 387 ~~i~~ 391 (463)
T KOG2816|consen 387 GNIFA 391 (463)
T ss_pred HHHHH
Confidence 76643
No 258
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.86 E-value=0.00026 Score=78.24 Aligned_cols=181 Identities=12% Similarity=0.107 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHH-HHHHhhhHHHHHhhhc-cchHHHHHHHHHHHH
Q 007405 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAY-LGRYWTIAIFTTIYL 147 (605)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~-~GR~~~~~~~~~~~~ 147 (605)
.+....+...++.+...++.+++|-|+..+|+.++++++.+.+...+ +..++.++||++..|+ ++.|+++....+..+
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 36667777788888888999999999999999999999988877655 6789999999999997 345555555555444
Q ss_pred HHHHHHHH-----hhhcc---ccCCC------------CCccccccc------ccCCCCCccchhHHHHHHHHHHHHHhh
Q 007405 148 AGLTGITL-----CATMK---VFMPN------------QDNCDRISQ------LLGSCEPAKSWQMLYLYTVLYITGFGA 201 (605)
Q Consensus 148 ~~~~~~~~-----~~~~~---~~~~~------------~~~c~~~~~------~~~~~~~~~~~~~~~~~~~~~l~g~g~ 201 (605)
++.+.... +...+ ...+. ...||.... ....|+..-...+..+++..++..+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 44433110 00000 00000 011221100 123354441234455555555544444
Q ss_pred cccchhhhhhhhccCCCCCchhhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhhh
Q 007405 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLVVYIQMEH 256 (605)
Q Consensus 202 g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~-~~~ig~~i~p~i~~~l~~~~ 256 (605)
+..........-...++++ |.-+.++... ...+|..=||++-|++.|..
T Consensus 466 ~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------------------------------
T ss_pred HhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 5444444455568888888 9999999555 56778888999999998863
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.85 E-value=0.0056 Score=64.30 Aligned_cols=185 Identities=13% Similarity=0.042 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~ 150 (605)
+.+.+....+....+|++.+.+-.- ...-|.+...+|.......+++.++..+.|.++||.-.-|.+.++......++.
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~-l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLA-LCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhc-cccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 4444444444445555554433322 234567778889999999999999999999999997334555555555555553
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHH
Q 007405 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (605)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~ 230 (605)
..+..... .+ ...+.++..-.+.|++..+..|...-+..|..-|..+ ++.
T Consensus 347 ~~l~~~t~----~~--------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E------~tS 396 (480)
T KOG2563|consen 347 LMLLTCTL----FL--------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE------GTS 396 (480)
T ss_pred HHHHHhhc----cC--------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC------ccc
Confidence 22222111 00 1223444555677888888888888888776655442 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc----hHHHHHHHHHHHHHHHHHHHHhccccccc
Q 007405 231 FNFFYLSVTVGAIVAFTLVVYIQMEHG----WGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (605)
Q Consensus 231 ~~~~~~~~~ig~~i~p~i~~~l~~~~g----w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 286 (605)
.|+.+...++.+.+=.++-+...+..+ |...-+.....+.+..++..+.++.+++.
T Consensus 397 sGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 397 SGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred ceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 555555555656655666666666655 33333334444445555555555555443
No 260
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.81 E-value=0.015 Score=46.84 Aligned_cols=66 Identities=8% Similarity=-0.072 Sum_probs=59.2
Q ss_pred HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 007405 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (605)
Q Consensus 90 ~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~ 156 (605)
+.+.+.+.++.++|.++++++.+.-.+++.++.+...++.++. .+++.+..+.++..+.++.+++.
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466678899999999999999999999999999999999986 88899999999988888888875
No 261
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.30 E-value=0.098 Score=58.94 Aligned_cols=179 Identities=12% Similarity=0.077 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH-HHHHHhhhHHHHHhhhc-cchHHHHHHHHHHHHH
Q 007405 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAY-LGRYWTIAIFTTIYLA 148 (605)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~G~laD~~-~GR~~~~~~~~~~~~~ 148 (605)
.....+...++.+.+.|..+++|-|+.++++.+...+..+.+... -+.+++..+||++.-|+ +.-|.+..+.++..++
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 667788888999999999999999999999999999998886654 45778899999999986 3445555554444444
Q ss_pred HHHH---HHHh--hhc------------cccCCCC---Cccccccc-c--------------------------------
Q 007405 149 GLTG---ITLC--ATM------------KVFMPNQ---DNCDRISQ-L-------------------------------- 175 (605)
Q Consensus 149 ~~~~---~~~~--~~~------------~~~~~~~---~~c~~~~~-~-------------------------------- 175 (605)
.++. ..+. ... +....++ ..||..=- +
T Consensus 474 ~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~ 553 (735)
T KOG3626|consen 474 SLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDG 553 (735)
T ss_pred HHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCC
Confidence 3333 2110 000 0000100 00221000 0
Q ss_pred ---------------------cCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHH
Q 007405 176 ---------------------LGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (605)
Q Consensus 176 ---------------------~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~ 234 (605)
...|...-...+..+++..++..+..+........++-...++++ |.-++++.
T Consensus 554 ~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG~~ 627 (735)
T KOG3626|consen 554 NTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALGFQ 627 (735)
T ss_pred ceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhHHH
Confidence 001212212233344444444444444444555566678889998 99999995
Q ss_pred HH-HHHHHHHHHHHHHHHHHhh
Q 007405 235 YL-SVTVGAIVAFTLVVYIQME 255 (605)
Q Consensus 235 ~~-~~~ig~~i~p~i~~~l~~~ 255 (605)
.+ ...+|.+-+|++-|++.|.
T Consensus 628 ~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 628 WMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHhcCCchHhhhhhHhh
Confidence 55 5677888899999999875
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.22 E-value=0.21 Score=53.48 Aligned_cols=138 Identities=9% Similarity=-0.077 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 87 ~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
+.-..+..|+... |+++...+..-+.-.+.+..++.+..++.+|+ |-.|+=+++.....++..++..+...+..
T Consensus 276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~---- 349 (432)
T PF06963_consen 276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGS---- 349 (432)
T ss_pred cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCC----
Confidence 3445678898877 99999999999999999999999999999997 99999999988887777776655332110
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p 246 (605)
+....+...++.+..+-=+|.=++--+..-++-|..|+++ |+...+.-+...++.-.+..
T Consensus 350 --------------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 350 --------------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred --------------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHH
Confidence 0011345556666666667777778888899999999998 99999998887777777766
Q ss_pred HHHH
Q 007405 247 TLVV 250 (605)
Q Consensus 247 ~i~~ 250 (605)
.++-
T Consensus 410 ~~~i 413 (432)
T PF06963_consen 410 VLTI 413 (432)
T ss_pred HHHh
Confidence 5443
No 263
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.08 E-value=0.087 Score=52.09 Aligned_cols=95 Identities=13% Similarity=0.031 Sum_probs=67.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhc
Q 007405 423 GASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEA 502 (605)
Q Consensus 423 ~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~ 502 (605)
+.+++..+.+|.++..+++.+....-.++ .++.+.|.+....++.+.+..+...+......+.+
T Consensus 62 ~~gp~~~l~iG~~~~~~GY~~~~l~~~~~----------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF 125 (250)
T PF06813_consen 62 RFGPWVVLLIGAVLGFVGYGLLWLAVSGR----------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF 125 (250)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHhCc----------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC
Confidence 44556667778777777776665542211 11135566666666667788888888888888999
Q ss_pred chhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 503 PDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 503 P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
|. .||.+.|+......+++.+-+.+...+.+
T Consensus 126 P~-~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 126 PR-SRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred cc-ccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 95 69999999999999999888887766543
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.98 E-value=0.048 Score=57.62 Aligned_cols=124 Identities=13% Similarity=0.099 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchh---
Q 007405 429 RVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDA--- 505 (605)
Q Consensus 429 ~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~--- 505 (605)
-+.+|.++..++.+++.+.... .. . ... .+...+.+.++++++|.++.=|....+..++.+++
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~-------~~-~-----~~~-~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIP-------PS-L-----PSG-IQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTS-------SS-C------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTT
T ss_pred hhhHHHHHHHHHHHHhHHHHhc-------ch-h-----hhh-HHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchh
Confidence 3667888888888775554210 00 0 001 34566778888999999999999999999998776
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhceec
Q 007405 506 MKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 584 (605)
Q Consensus 506 ~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~~ 584 (605)
.|..+...+....++|..++..+.+++.+.. +| ...|.+.++..+++++.++...++++++
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~--------~~----------~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNY--------GW----------FLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---------H----------HHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhcccc--------ch----------hhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 5667778888999999999999988877522 24 5678888888888888877766666655
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.95 E-value=0.19 Score=53.86 Aligned_cols=165 Identities=13% Similarity=0.059 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhCCC----hhHHHHHHHHHHHHHHHhhhHHHHHhhhccchH-------HHHHHHHHHHHHHHHHHHHh
Q 007405 88 LSVNMVTFMFYVMHKS----FADSSNAVNNFLGISQASSVLGGFLADAYLGRY-------WTIAIFTTIYLAGLTGITLC 156 (605)
Q Consensus 88 ~~~~l~~yl~~~~~~s----~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~-------~~~~~~~~~~~~~~~~~~~~ 156 (605)
..+.+..|..+.-+.+ .-...+..+.-.+...+..|+..++--+. +|+ .-+-+++++..++.+.+...
T Consensus 303 ~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~ 381 (498)
T COG3104 303 MGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLA 381 (498)
T ss_pred ccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3455666765532222 11223444444445555566666665553 433 22334555555555554443
Q ss_pred hhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHH
Q 007405 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (605)
Q Consensus 157 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~ 236 (605)
.... . .+.+..+.++++.+.+++++|.=+..|...++++...|++- .+..++.+.+
T Consensus 382 ~~~~-~-----------------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfL 437 (498)
T COG3104 382 GIWF-G-----------------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFL 437 (498)
T ss_pred HHhh-c-----------------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHH
Confidence 1110 0 00122567888888999999999999999999999999987 8888899888
Q ss_pred HHHHHHHHHHHHHHH------HHhhhchHHHHHHHHHHHHHHHHHHH
Q 007405 237 SVTVGAIVAFTLVVY------IQMEHGWGSAFGALAIAMGISNMLFF 277 (605)
Q Consensus 237 ~~~ig~~i~p~i~~~------l~~~~gw~~~f~~~~~~~~i~~~~~~ 277 (605)
+...|..++..+.+. ..+.......|+..+....+..+..+
T Consensus 438 t~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 438 TVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 888888887766652 22223344556655555444433333
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.54 E-value=0.11 Score=56.09 Aligned_cols=133 Identities=13% Similarity=0.124 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhH
Q 007405 427 LQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAM 506 (605)
Q Consensus 427 ~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~ 506 (605)
++-+.+|.+++.++-+++..++.. ++...+++....++.|+|.+. ....=.|+.+..-.+.
T Consensus 102 k~Pli~s~ii~~~g~llY~~l~~~------------------~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~d 162 (488)
T KOG2325|consen 102 KKPLIVSFLIAIIGNLLYLALAYV------------------PNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVED 162 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhc------------------ccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccc
Confidence 334778888888888887655432 212678889999999998544 3455666666555566
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhhcee
Q 007405 507 KSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKY 583 (605)
Q Consensus 507 rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~~~~ 583 (605)
|.++++.....+.+|..+||.+...+..... .+..|++. +.-+.|...=|+.+++.++.+++..++.++...
T Consensus 163 R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~----~G~~i~~~-~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 163 RPRAFAATSGGFVLGIILGPTIQLAFTPLGE----KGFMILPG-LIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC----CceEEcCc-ceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 7777777777777888888877766544221 11223332 222223344567778888888877777765443
No 267
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.47 E-value=2.2 Score=46.03 Aligned_cols=114 Identities=20% Similarity=0.140 Sum_probs=73.2
Q ss_pred HHHHHhhhHHHHHhhhc--cchHHHHHHHHHHHHHHHHHHHHhhhccc-cCCCCCcccccccccCCCCCccchhHHHHHH
Q 007405 116 GISQASSVLGGFLADAY--LGRYWTIAIFTTIYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGSCEPAKSWQMLYLYT 192 (605)
Q Consensus 116 ~~~~~~~~~~G~laD~~--~GR~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 192 (605)
.+..++..+.+.+++|. +||++++.++.++..++.++.-++...-. +.++ ..-.....++.....+
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t-----------~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPT-----------DSPPLLFTPSYYLALI 358 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCC-----------cccccccccchhHHHH
Confidence 34444556666776654 59999999999999988888776522100 1110 0001111123334444
Q ss_pred HHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 007405 193 VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (605)
Q Consensus 193 ~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~ 247 (605)
.-++.|++-++.......++++.+ +++ |..+++++-+--.++..++-.
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~-~~~------~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLY-PDD------RAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHh-cCc------hHHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999 455 788888876666666655443
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.45 E-value=3.4 Score=47.07 Aligned_cols=91 Identities=27% Similarity=0.382 Sum_probs=73.5
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 007405 471 LSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQN 550 (605)
Q Consensus 471 ~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~ 550 (605)
++.+|++++|+++++||.+.....+|+.++++|+++|+..++++.+..++|+.+...+...=. -...|
T Consensus 563 ~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~--------~~~~~---- 630 (654)
T TIGR00926 563 VSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFEN--------FSVQA---- 630 (654)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------ChHHH----
Confidence 788999999999999999999999999999999999999999999999999999988875411 01122
Q ss_pred CcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 551 INTGRFDYLYWLLAVLSVINFCAFLYSAYR 580 (605)
Q Consensus 551 ~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 580 (605)
.-|.+++.+.++..+++.++++.
T Consensus 631 -------~~~~~~~~~~~~~~~~f~~~a~~ 653 (654)
T TIGR00926 631 -------AEFFLFASLMLVVMAIFSILAYF 653 (654)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 34666666666666666666654
No 269
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.96 E-value=0.9 Score=48.09 Aligned_cols=63 Identities=8% Similarity=0.074 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
+.+.+++..+..|+..|+.+.+....+.|..++++ |.-.++....+-.+|..++.+++-++..
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 55666666678899999999999999999988888 9999999888888888888877766543
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.01 E-value=1.3 Score=47.97 Aligned_cols=90 Identities=16% Similarity=0.185 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhh---cchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCC
Q 007405 472 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEE---APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA 548 (605)
Q Consensus 472 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~---~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~ 548 (605)
+.......+++..+|..+......+...|. -|.+ +|..++.....+.+|+.++..+.+...+..+
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~----------- 152 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG----------- 152 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-----------
Confidence 344455566667888888888888888775 4555 8899999999999999999999887655222
Q ss_pred CCCcCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007405 549 QNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 580 (605)
Q Consensus 549 ~~~~~~~~~~~f~~~a~l~~v~~~~~~~~~~~ 580 (605)
.+..|.+.+++..+..+..+++..+
T Consensus 153 -------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 153 -------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred -------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 1234666666666666555555554
No 271
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.17 E-value=1.6 Score=44.51 Aligned_cols=121 Identities=17% Similarity=0.091 Sum_probs=71.5
Q ss_pred CcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH
Q 007405 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (605)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~ 140 (605)
++.+++.-|.++.+....++...+|-+ ..++...+..++|.... ...........++.+.+..+ +|-|+++.
T Consensus 21 ~r~~~~~~knv~i~s~~fl~~f~a~~g-l~nlq~~vn~~lg~~sl------~~~y~~l~~s~m~~~~~Ir~-~g~K~tm~ 92 (390)
T KOG3097|consen 21 RRKRLGILKNVLILSIAFLLTFTAYLG-LQNLQTSVNYDLGTVSL------GALYLSLIDSSMFMPLLIRF-LGTKWTMV 92 (390)
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHH-HHHHHHHHhcCcccchh------hhhhHHHHHHHHHHHHHHHH-HhhHHHHH
Confidence 344455556666666666666555443 34555555544432211 11122233344444566666 59999998
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 007405 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (605)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (605)
++...+......--. ..+..++.+-...|+|.+..+..-.+++++.-..
T Consensus 93 lav~~Y~lyiA~Nl~-----------------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ 141 (390)
T KOG3097|consen 93 LAVFPYALYIAANLE-----------------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQN 141 (390)
T ss_pred HHHHHHHHHHHhhcc-----------------------------hhHHhhccHHHhhccccccccccCcceecHHHHH
Confidence 888776644322211 3556677777889999999998888887765443
No 272
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.30 E-value=8 Score=39.93 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.1
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 007405 471 LSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQN 550 (605)
Q Consensus 471 ~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~~~~~~~~~~~~w~~~~ 550 (605)
.++|+.-..|++...-..+..+....-+.+....+.-|...|+..+. +-.+=+.+.-++.+..| +.-+
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g---------~~L~ 391 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFV---ALILQSILTLIVVDDRG---------LGLD 391 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEcccc---------cCCC
Confidence 46778888899988888888888887788778888888888887763 33344444444444222 1111
Q ss_pred Cc--CcchhHHHHHHHHHHHHHHHHHHH
Q 007405 551 IN--TGRFDYLYWLLAVLSVINFCAFLY 576 (605)
Q Consensus 551 ~~--~~~~~~~f~~~a~l~~v~~~~~~~ 576 (605)
+. -.-|..+|.+++++.++.....+.
T Consensus 392 ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 392 IRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred cceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 11 111334577777777777555443
No 273
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=90.92 E-value=25 Score=38.37 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=53.7
Q ss_pred HHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q 007405 195 YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (605)
Q Consensus 195 ~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~ 272 (605)
++.++........--..+.+++|.+++ |..+++-+....++...+..++++.+.+..||.....+.-++.++.
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~-----~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNE-----YSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 335555566666666778888876543 8999999888888888777667799999999998777665555443
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.43 E-value=2.6 Score=38.49 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Q 007405 472 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 533 (605)
Q Consensus 472 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 533 (605)
+.+.+++.-++.|+|.++.+++.-.++.+...++.|++..|++....+.+..+|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888899999999999999999999999999999999999999988888877765543
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.58 E-value=34 Score=36.99 Aligned_cols=60 Identities=10% Similarity=0.109 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 007405 472 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSI 531 (605)
Q Consensus 472 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~ 531 (605)
+-++.++..+++|+..+......+.+..+.++++.|..+..+..++-.+|-.+|+.+.-.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566668889999999999999999999999999999999999999999999887543
No 276
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.04 E-value=3.5 Score=40.82 Aligned_cols=140 Identities=13% Similarity=0.078 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhhhccchHH---HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCcc
Q 007405 107 SSNAVNNFLGISQASSVLGGFLADAYLGRYW---TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAK 183 (605)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~G~laD~~~GR~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 183 (605)
-|.+.+.|+++..+++-+...+..|- |.+ .+.+..++......+..+... ..|+
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~Lpilt~~---vsP~------------------ 340 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALLLPILTSS---VSPS------------------ 340 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHHHHHHHhc---cCCC------------------
Confidence 46778888888887777776666553 222 233333322222222111110 1121
Q ss_pred chhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHH
Q 007405 184 SWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFG 263 (605)
Q Consensus 184 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~ 263 (605)
+.++..-+++..++-.+.|.++|.+.-+=.+..|++. |.+.++++....++..-++-...-.=....+-|..|.
T Consensus 341 kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~ 414 (454)
T KOG4332|consen 341 KESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFG 414 (454)
T ss_pred cCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhh
Confidence 1334444666667778889999999988888889888 9999999998887755543211000001234567788
Q ss_pred HHHHHHHHHHHH
Q 007405 264 ALAIAMGISNML 275 (605)
Q Consensus 264 ~~~~~~~i~~~~ 275 (605)
++.+...++.+.
T Consensus 415 icS~~~~~a~i~ 426 (454)
T KOG4332|consen 415 ICSAFLFVASIL 426 (454)
T ss_pred hhHHHHHHHHHH
Confidence 877766655443
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.87 E-value=4.3 Score=43.84 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007405 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (605)
Q Consensus 187 ~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i 248 (605)
-+..++..++.|+..|-.......+..+..++++ |..+-.+..++.++|-.+|..+
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566788999999888888888888888766 7777777777777777766654
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=86.03 E-value=1.4 Score=46.85 Aligned_cols=90 Identities=9% Similarity=-0.158 Sum_probs=58.2
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChh---------------H-HHHHHHHHHHHHHHhhhHHH
Q 007405 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSFA---------------D-SSNAVNNFLGISQASSVLGG 126 (605)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-~~~s~~---------------~-~~~~~~~~~~~~~~~~~~~G 126 (605)
.+..+|..+.+++..++..++.+...-+...++-++ ++=++. + -.|-+.++.....+.+..--
T Consensus 274 ~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~ 353 (498)
T KOG0637|consen 274 LKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVE 353 (498)
T ss_pred HhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 355667888999999999888877666666665442 222211 1 12556667777788888889
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHH
Q 007405 127 FLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (605)
Q Consensus 127 ~laD~~~GR~~~~~~~~~~~~~~~~~~~ 154 (605)
++.|++ |-|+.++.+...+.++..+.+
T Consensus 354 ~l~~~~-g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 354 KLSRKF-GTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred HHHHhc-CcceEEeehhHHHHHHHHHHh
Confidence 999997 855555555444444444444
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=82.99 E-value=36 Score=36.28 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=52.2
Q ss_pred chHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 471 LSAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 471 ~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
.+.+++....++.|++... -.+-.++++..+|++.--++++......-+|.+++..++..+..
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888887544 67778999999999988899999999999999999999887665
No 280
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=81.86 E-value=85 Score=34.33 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 474 YWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 474 ~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
..++.++++-.+..-..+.+..+|-.+++.+..=|++|.+.|...++|+.--..++-.+.+
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD 466 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVD 466 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 3456678888888899999999999999999999999999999999998877666555443
No 281
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=80.98 E-value=70 Score=32.76 Aligned_cols=50 Identities=14% Similarity=0.238 Sum_probs=37.5
Q ss_pred HHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHh
Q 007405 483 IGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSII 532 (605)
Q Consensus 483 ~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i 532 (605)
-|+-.+..++...--+.++.+++.|-.+|+.....-.+|-.++..+.--+
T Consensus 352 EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 352 EGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 35444555556666666778899999999999999999988888776443
No 282
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=78.69 E-value=1.1e+02 Score=33.64 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=51.4
Q ss_pred HHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 007405 196 ITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 196 l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 274 (605)
..|+........--..+.+++|+.++ +..++|-+....++-..+-.++++.+....||+..-.+.-+.+++..+
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~-----ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPND-----YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 35566566666666777788887653 788888877776666666667888999999999877665444444333
No 283
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=71.82 E-value=1.6e+02 Score=32.19 Aligned_cols=165 Identities=10% Similarity=0.023 Sum_probs=99.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---hhHHHHHHHHHHH-HHHHhhhHHHHHhhhccchHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKS---FADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAIF 142 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~~~s---~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~GR~~~~~~~ 142 (605)
-++.++.+.+..+|..+.++.+. -+.+.+..+ ++...++-....+ ...+..++-+++.+++ -|.+++.+.
T Consensus 25 E~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~ 98 (509)
T COG3202 25 ELKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHH
Confidence 45566666666666555543222 234444433 4444555555555 6778889999999996 999999988
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCC-----CCCc-c---------chhHHHHHHHHHHHHHhhccc-ch
Q 007405 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS-----CEPA-K---------SWQMLYLYTVLYITGFGAAGI-RP 206 (605)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~-----~~~~-~---------~~~~~~~~~~~~l~g~g~g~~-~~ 206 (605)
+..+....+++++... | .|+.-||+..- -..| . .++...+++. .-+-.... .-
T Consensus 99 ~~~F~~fF~LFa~Vi~-----P---~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~---aELWgslV~S~ 167 (509)
T COG3202 99 LGFFLGFFALFAFVIY-----P---YKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIM---AELWGSLVLSL 167 (509)
T ss_pred HHHHHHHHHHHHHHHh-----c---cccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHH---HHHHHHHHHHH
Confidence 8888888888777533 1 12222232110 0111 0 0111122211 11111111 12
Q ss_pred hhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 207 ~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
....+..|++..++ -.+++++++...|++..++..+..++..
T Consensus 168 lFw~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 168 LFWQFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45677788888888 7899999999999999999888888765
No 284
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=70.85 E-value=1.5e+02 Score=31.54 Aligned_cols=58 Identities=14% Similarity=0.209 Sum_probs=51.4
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHH
Q 007405 472 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILN 529 (605)
Q Consensus 472 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~ 529 (605)
+-+|.++..+++|+..+-.....+.++.+..|++.+-.+..+....-..|-++|+.+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 5677888888999999999999999999999999999999999998888888887775
No 285
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.29 E-value=15 Score=30.75 Aligned_cols=31 Identities=16% Similarity=-0.039 Sum_probs=21.8
Q ss_pred HHHhhhHHHHHhhhccchHHHHHHHHHHHHH
Q 007405 118 SQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (605)
Q Consensus 118 ~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~ 148 (605)
+.+.....|||-|+|.|-++..+|..++...
T Consensus 55 GilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 55 GILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 3344456699999999999887776554433
No 286
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=69.98 E-value=89 Score=30.16 Aligned_cols=62 Identities=23% Similarity=0.249 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHhHhhhhhhHHHHHhhcch-hHHHHHHHHHHH-HhhHHHHHHHHHHHHhhc
Q 007405 473 AYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPD-AMKSIGSAYAAL-AGGLGCFAASILNSIIKS 534 (605)
Q Consensus 473 ~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~lg~~l~~~l~~~i~~ 534 (605)
.+.++...++.|++.+...+....+..+..|. +.|+...+.... ...+|..+++.+.+.+..
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLG 157 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566668888889999999999999998 678888888888 577888888866666554
No 287
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=69.33 E-value=55 Score=35.74 Aligned_cols=59 Identities=12% Similarity=0.116 Sum_probs=45.2
Q ss_pred HHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhch
Q 007405 194 LYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (605)
Q Consensus 194 ~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw 258 (605)
-++..+..-.....+.++-+...+|.. -|+.|.+.+...|+|+---..+.-++.|...+
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~ 470 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTV 470 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhhccc
Confidence 345556666777888899999999999 89999999999999877666566666665443
No 288
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=61.61 E-value=2.9 Score=42.93 Aligned_cols=56 Identities=7% Similarity=0.154 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 007405 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (605)
Q Consensus 187 ~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i 248 (605)
-+..++..++.|+..|-.......+..+..++++ |..+-.+..++.++|-.+|..+
T Consensus 248 d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 248 DAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -------------------HHHH---------------------------------------
T ss_pred hHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666778999999988888888889888777 6666666666666666665543
No 289
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=59.96 E-value=2.7e+02 Score=30.61 Aligned_cols=171 Identities=12% Similarity=0.023 Sum_probs=91.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCChhHHHHHHHHHHH-HHHHhhhHHHHHhhhccchHHHHHHH
Q 007405 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIAIF 142 (605)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~~---~~s~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~GR~~~~~~~ 142 (605)
-++.++.+.+..++..+.+..+. -+++.+ ...++....+-....+ ...+...+-.++++++ +|.+++.+.
T Consensus 22 E~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~ 95 (491)
T PF03219_consen 22 ELKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYII 95 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHH
Confidence 34556666666666555532211 122211 1123333333332333 4555677789999997 999999888
Q ss_pred HHHHHHHHHHHHHhhhcc--ccCCCCCcccccccccCCCCCccchh------HHHHHHHHHHHHHhhcccch-hhhhhhh
Q 007405 143 TTIYLAGLTGITLCATMK--VFMPNQDNCDRISQLLGSCEPAKSWQ------MLYLYTVLYITGFGAAGIRP-CVSSFGA 213 (605)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~--~~~~~~~~c~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~g~g~~~~-~~~~~~~ 213 (605)
...+.....+.++...+. .++|+ ..|.+. +...++.-.. .|.+.+.-++.-+-...... ....+..
T Consensus 96 ~~~F~~fF~~f~~vlyP~~~~lhp~-~~~~~~----~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN 170 (491)
T PF03219_consen 96 IIPFLGFFALFAFVLYPNRDILHPD-AFADKL----LAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFAN 170 (491)
T ss_pred HHHHHHHHHHHHHHHhhchhhcCCC-HHHHHh----hhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777666666542210 12221 001000 0000110000 01111111111111112222 4578889
Q ss_pred ccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007405 214 DQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (605)
Q Consensus 214 d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~ 254 (605)
|.++.++ -.+++++++.+.|+|..++..+..++.+
T Consensus 171 ~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 171 EITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred hcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888 7899999999999999999988888776
No 290
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=53.86 E-value=3e+02 Score=29.21 Aligned_cols=56 Identities=11% Similarity=0.099 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHH
Q 007405 474 YWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILN 529 (605)
Q Consensus 474 ~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~ 529 (605)
..+.......-+|.-+.-++..-...+..|++.|....|+.|..+..-..+--.++
T Consensus 387 ~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilv 442 (503)
T KOG2601|consen 387 YLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILV 442 (503)
T ss_pred HHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEE
Confidence 33333333333455555666666777889999999999999998888777765554
No 291
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=53.19 E-value=2.4e+02 Score=28.05 Aligned_cols=231 Identities=13% Similarity=0.047 Sum_probs=0.0
Q ss_pred CCCchhhhhhhHHHHHHHHHHHHHHHHH--HHHHH---HHHhhhchHHHHHHHHHHHHHHHHHHHHhcccccccCCC---
Q 007405 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVA--FTLVV---YIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPG--- 289 (605)
Q Consensus 218 ~~~~~~~~~r~~~~~~~~~~~~ig~~i~--p~i~~---~l~~~~gw~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~--- 289 (605)
.++ |+....+..++.++|+.++ |.+.. .......|++++.+.+++.++-++++.+.-.+....+++
T Consensus 1 ~k~------K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~ 74 (267)
T PF07672_consen 1 QKK------KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQ 74 (267)
T ss_pred CCc------cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccc
Q ss_pred -CCchhHHHHHHHHHHHhhccccCccccccccccCCCcccccCCcccccCCCcchhhHhhhhhccccCCCCCCccccchh
Q 007405 290 -GSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQ 368 (605)
Q Consensus 290 -~~~~~~~~~v~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (605)
+.......+.......|+
T Consensus 75 ~k~~~~~~~~~s~~~~LK~------------------------------------------------------------- 93 (267)
T PF07672_consen 75 EKENSTLSKKPSYKSILKE------------------------------------------------------------- 93 (267)
T ss_pred ccccccccccchHHHHHcc-------------------------------------------------------------
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHhhhhhHHHHHHhhhccCCCCeeeCC-------------------------CCCCCC
Q 007405 369 VEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHMGKLKLPV-------------------------TCHPRG 423 (605)
Q Consensus 369 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-------------------------~~~~~~ 423 (605)
++.-....+-..++...++-..........-....+.+....+-.+.. +...||
T Consensus 94 -K~tw~w~~~Yg~wLv~~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk 172 (267)
T PF07672_consen 94 -KETWKWILIYGIWLVVVVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRK 172 (267)
T ss_pred -chHHHHHHHHHHHheeEEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceeeccchhhhhhhh
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCcchHHHHHHHHHHHHHHhHhhhhhhHHHHHhh--
Q 007405 424 ASQLQRVGIGLAVSILSVIWAGIFERYRRNYAISHGYEFSFLTAMPDLSAYWLLIQYCLIGIAEVFCIVGLLEFLYEE-- 501 (605)
Q Consensus 424 ~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~-- 501 (605)
+-....+..|+++.+++.++..... .....+...+.+.-++.|...-.+.+.....-.|.
T Consensus 173 ~fi~~~~~~gi~~~~l~~~~~~~~g------------------~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~ 234 (267)
T PF07672_consen 173 PFIHFIISLGIVFFVLSIVVVYFVG------------------PGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKG 234 (267)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhC------------------cchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcC
Q ss_pred cchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 502 APDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 502 ~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
..++.-|...|+....+.+...+.-.+...+.+
T Consensus 235 ~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~~ 267 (267)
T PF07672_consen 235 YNPKKIGIQFGLIWGFGYIFYTIYDIILSVIAD 267 (267)
T ss_pred CCcceehhHHHHHHHHHHHHHHHHHHHHHHhcC
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=52.65 E-value=36 Score=38.10 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=56.8
Q ss_pred hhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007405 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (605)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~ 256 (605)
-+..+++--.+++|++.........-+.=+++|++- |..+.+++.....+|..++..+...+....
T Consensus 456 mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 456 MSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred eeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 567777777789999999988888888899999999 999999999999999999998887665544
No 293
>PRK10263 DNA translocase FtsK; Provisional
Probab=49.67 E-value=1.9e+02 Score=35.62 Aligned_cols=13 Identities=31% Similarity=0.547 Sum_probs=8.6
Q ss_pred HhhhHHHHHhhhc
Q 007405 120 ASSVLGGFLADAY 132 (605)
Q Consensus 120 ~~~~~~G~laD~~ 132 (605)
.+..+|.|++|-+
T Consensus 63 l~GiVGA~LAD~L 75 (1355)
T PRK10263 63 LGGMPGAWLADTL 75 (1355)
T ss_pred ccchHHHHHHHHH
Confidence 4556777777754
No 294
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=49.42 E-value=1.9e+02 Score=33.39 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=32.6
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhccc
Q 007405 130 DAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGI 204 (605)
Q Consensus 130 D~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~ 204 (605)
|++-||.+-++++.++++++.+...+.. ...+.+..+.++.+++.++.
T Consensus 51 ~~~~~R~~~l~~t~~~f~i~sl~v~ll~---------------------------~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 51 DRLTGRLKNVIFTLICFSIASFSVELLF---------------------------GKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------cCcHHHHHHHHHHHHHHHHH
Confidence 4456788888888888888877766542 24566667776666665543
No 295
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=48.52 E-value=87 Score=22.69 Aligned_cols=34 Identities=9% Similarity=0.139 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 007405 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (605)
Q Consensus 112 ~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~ 145 (605)
.....+..+.....|+..|+.+|..+...+..++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 3344555666677889999988986665554443
No 296
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=47.91 E-value=4.1e+02 Score=29.11 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=52.4
Q ss_pred HHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 007405 196 ITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG-AIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (605)
Q Consensus 196 l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig-~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~ 274 (605)
..|++.......--+-+.+.+|.... +..+++-+..-.++- ..+.-.+++.+...+||-+.-.+.-+.++++.+
T Consensus 293 ~Y~v~inLvE~~wKs~ik~~~~~~~~-----~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~ 367 (509)
T COG3202 293 AYGVSINLVEGVWKSGIKELYPTTNE-----YTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGV 367 (509)
T ss_pred HHHHHHHHHHHHHHHhHHHhcCChhH-----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 34555555555555667778887653 777777766654444 555566778888999999888777777777766
Q ss_pred HHH
Q 007405 275 LFF 277 (605)
Q Consensus 275 ~~~ 277 (605)
+++
T Consensus 368 lFF 370 (509)
T COG3202 368 LFF 370 (509)
T ss_pred HHH
Confidence 554
No 297
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=47.51 E-value=96 Score=32.96 Aligned_cols=127 Identities=13% Similarity=0.022 Sum_probs=69.1
Q ss_pred HHHHHHHHHhCCC---hhHHHHHHHH-HHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 007405 91 NMVTFMFYVMHKS---FADSSNAVNN-FLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (605)
Q Consensus 91 ~l~~yl~~~~~~s---~~~~~~~~~~-~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (605)
..|.+..+..+-. ..-.-..... |.+.-.+|.+...++-+. +||+. .+..++-.+..-+..++...|
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l-~i~v~lR~lfiPlF~~cn~~~------ 335 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKL-TIPVLLRLLFIPLFLLCNYPP------ 335 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCcee-hHHHHHHHHHHHHHHHhccCC------
Confidence 4566665543322 2223344444 667777776666666553 44444 344444444444444332111
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHH
Q 007405 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (605)
Q Consensus 167 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~ 245 (605)
.++.=.+-+++++...+.|+..|=...+...+.....++++ +..+-++.......|-..|
T Consensus 336 -------------~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 336 -------------LPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred -------------CCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHh
Confidence 01111344666777788999999888888888888888877 4444444444444444433
No 298
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=43.43 E-value=1.7e+02 Score=33.77 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=21.7
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHh
Q 007405 129 ADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (605)
Q Consensus 129 aD~~~GR~~~~~~~~~~~~~~~~~~~~~ 156 (605)
-|++-||.+-++++.++++++.+...+.
T Consensus 50 ~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 50 DDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455578899999999988888777764
No 299
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=41.49 E-value=56 Score=29.55 Aligned_cols=48 Identities=13% Similarity=0.138 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 007405 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (605)
Q Consensus 187 ~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 243 (605)
...+++..+++|+|.- +..+.+++--.++++ -|+++|+-.+-.|++-+
T Consensus 97 ~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r------~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGLL---GISYGILSASWDPER------EGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hHHHHHHHHHHHHHHH---hhhhhhcccccCCCC------CCCcccHHHHHHhHHHH
Confidence 3444455455555543 355666777778887 68999887777777554
No 300
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=40.14 E-value=1.6e+02 Score=29.37 Aligned_cols=28 Identities=18% Similarity=0.231 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhceeccc
Q 007405 559 LYWLLAVLSVINFCAFLYSAYRYKYRSE 586 (605)
Q Consensus 559 ~f~~~a~l~~v~~~~~~~~~~~~~~~~~ 586 (605)
.=+++-++.++.+++|+++++|.|....
T Consensus 264 aalvllil~vvliiLYiWlyrrRK~swk 291 (295)
T TIGR01478 264 AALVLIILTVVLIILYIWLYRRRKKSWK 291 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3455567777788888888877766543
No 301
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=38.35 E-value=3.1e+02 Score=27.22 Aligned_cols=25 Identities=20% Similarity=0.145 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHHH
Q 007405 505 AMKSIGSAYAALAGGLGCFAASILN 529 (605)
Q Consensus 505 ~~rg~~~g~~~~~~~lg~~l~~~l~ 529 (605)
-+|..+.|+..+..+..+.+..-..
T Consensus 75 ii~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555544443
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.22 E-value=2.5e+02 Score=23.79 Aligned_cols=33 Identities=6% Similarity=0.038 Sum_probs=26.8
Q ss_pred cchhHHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Q 007405 502 APDAMKSIGSAYAALAGGLGCFAASILNSIIKS 534 (605)
Q Consensus 502 ~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~~ 534 (605)
...+.++.++++-...-.+++.+-.+.++++.+
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD 67 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLD 67 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678888998888888888888888888776
No 303
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=36.16 E-value=3.8e+02 Score=31.89 Aligned_cols=42 Identities=5% Similarity=-0.179 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhc
Q 007405 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY 132 (605)
Q Consensus 89 ~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~ 132 (605)
..++...+...+|++....++.+..+ +..+.-++..+++-|-
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArk 993 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARK 993 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHc
Confidence 34556666677888887766544333 4444444444444443
No 304
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=35.77 E-value=1.6e+02 Score=23.16 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 007405 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (605)
Q Consensus 233 ~~~~~~~ig~~i~p~i~~~l~~~~gw~~~f~~~~~~~~i~~~~ 275 (605)
++.....+++.++ .+.||+.++ .+..+++.++..++++++
T Consensus 12 l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 12 LMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhh
Confidence 3444555666666 466777665 455555555555555444
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=34.93 E-value=4e+02 Score=25.21 Aligned_cols=40 Identities=13% Similarity=-0.096 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhhHHHHHhh---hccchHHHHHHHHHHHHHHHHH
Q 007405 112 NNFLGISQASSVLGGFLAD---AYLGRYWTIAIFTTIYLAGLTG 152 (605)
Q Consensus 112 ~~~~~~~~~~~~~~G~laD---~~~GR~~~~~~~~~~~~~~~~~ 152 (605)
....+...++..+++.+.+ +. .+++.....+.+..+....
T Consensus 53 ~~~i~~F~~G~~~~~~i~~~~~~~-~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 53 LLAILSFILGAFLAGLIVRRSRRR-RRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHHHHH
Confidence 3344556666667777722 22 3444444444444443333
No 306
>PRK03612 spermidine synthase; Provisional
Probab=34.01 E-value=5.9e+02 Score=28.23 Aligned_cols=50 Identities=18% Similarity=0.102 Sum_probs=30.7
Q ss_pred HHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHHHhh
Q 007405 483 IGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNSIIK 533 (605)
Q Consensus 483 ~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~~i~ 533 (605)
.++-.++..|...-+..+... +.-|...|-......+|+.+|+++.+.+.
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 344445555555544433222 12355667777888899999999888654
No 307
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=33.09 E-value=4e+02 Score=28.01 Aligned_cols=86 Identities=7% Similarity=-0.036 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhH
Q 007405 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (605)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~G~laD~~~GR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~ 187 (605)
|.+=.+..+.++++.+..|++--.+ -|..-++++..-...+..+..++.. ++.
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~t--------------------------~~I 326 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQT--------------------------QHI 326 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhcc--------------------------cce
Confidence 3444556667777888888886664 5554444443322222222222211 567
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 007405 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (605)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (605)
+..+++-++...-.....+....-++.-...+.
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~ 359 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIATFQIARNLSSEL 359 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh
Confidence 777777777766666666666666676666655
No 308
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=32.23 E-value=22 Score=31.20 Aligned_cols=17 Identities=12% Similarity=-0.031 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 007405 259 GSAFGALAIAMGISNML 275 (605)
Q Consensus 259 ~~~f~~~~~~~~i~~~~ 275 (605)
||++++..++.++.+++
T Consensus 1 RW~l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLF 17 (130)
T ss_pred CeeeHHHHHHHHHHHHH
Confidence 45555444444333333
No 309
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=32.16 E-value=75 Score=31.62 Aligned_cols=61 Identities=13% Similarity=0.044 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHH---------hhhccchHHH
Q 007405 76 GNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFL---------ADAYLGRYWT 138 (605)
Q Consensus 76 ~~~~~~~~~~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l---------aD~~~GR~~~ 138 (605)
+..+.+-..-....+++..|+++ .|.++...+.++.+..+.-++..++.|.. -||+ |||+.
T Consensus 24 vGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~ 93 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMS 93 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceee
Confidence 34555555556677888889875 56777777788888889999999988744 5776 98874
No 310
>PTZ00370 STEVOR; Provisional
Probab=31.19 E-value=1.1e+02 Score=30.56 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhceeccc
Q 007405 559 LYWLLAVLSVINFCAFLYSAYRYKYRSE 586 (605)
Q Consensus 559 ~f~~~a~l~~v~~~~~~~~~~~~~~~~~ 586 (605)
.=+++-++.++.+++|+++++|.|....
T Consensus 260 aalvllil~vvliilYiwlyrrRK~swk 287 (296)
T PTZ00370 260 AALVLLILAVVLIILYIWLYRRRKNSWK 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 3455567777888888888877765543
No 311
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.90 E-value=2.1e+02 Score=23.91 Aligned_cols=21 Identities=14% Similarity=0.044 Sum_probs=12.3
Q ss_pred HhhhHHHHHhhhccchHHHHH
Q 007405 120 ASSVLGGFLADAYLGRYWTIA 140 (605)
Q Consensus 120 ~~~~~~G~laD~~~GR~~~~~ 140 (605)
+...+.|...|+.+|-.+.+.
T Consensus 57 l~G~~lG~WLD~~~~t~~~~t 77 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWT 77 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHH
Confidence 334556777777667655333
No 312
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=26.77 E-value=6.5e+02 Score=25.15 Aligned_cols=14 Identities=14% Similarity=0.399 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHH
Q 007405 473 AYWLLIQYCLIGIA 486 (605)
Q Consensus 473 ~~~lv~~~~l~g~g 486 (605)
.|.+.+.+++.+++
T Consensus 23 ~~l~~~~~~~~~F~ 36 (284)
T PF12805_consen 23 PWLLILVLALLTFF 36 (284)
T ss_pred cHHHHHHHHHHHHH
Confidence 34444444444444
No 313
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.63 E-value=4e+02 Score=22.28 Aligned_cols=36 Identities=11% Similarity=0.338 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc----hHHHHHHHHHHHH
Q 007405 235 YLSVTVGAIVAFTLVVYIQMEHG----WGSAFGALAIAMG 270 (605)
Q Consensus 235 ~~~~~ig~~i~p~i~~~l~~~~g----w~~~f~~~~~~~~ 270 (605)
.+.+.+..++|..++-||-..++ |..+|.+.++++.
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G 88 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIG 88 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 33444445555556666666554 4444444444433
No 314
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=23.65 E-value=5.9e+02 Score=27.26 Aligned_cols=61 Identities=8% Similarity=-0.016 Sum_probs=47.4
Q ss_pred HHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhchHHH
Q 007405 195 YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSA 261 (605)
Q Consensus 195 ~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~i~p~i~~~l~~~~gw~~~ 261 (605)
.+.+...-.......++.+...|+.- -++.+++.+...|+|+---..++.++.|..+|.-.
T Consensus 377 ~~~~~~~ts~fv~~maf~aqisdp~i------ggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 377 AFHQVFVTSMFVSGMAFHAQISDPAI------GGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCccc------CccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 34444444455667788899999998 89999999999999998888888888887766543
No 315
>PRK11715 inner membrane protein; Provisional
Probab=23.23 E-value=9.7e+02 Score=25.88 Aligned_cols=20 Identities=15% Similarity=0.047 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 007405 431 GIGLAVSILSVIWAGIFERY 450 (605)
Q Consensus 431 ~~G~~~~~~~~~~~~~~~~~ 450 (605)
--|+++.++.++.+.++|..
T Consensus 305 KYgiLFI~LTF~~fFlfE~~ 324 (436)
T PRK11715 305 KYAILFIALTFAAFFLFELL 324 (436)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 34777778888888888764
No 316
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.00 E-value=1.1e+03 Score=25.53 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007405 432 IGLAVSILSVIWAGIFERY 450 (605)
Q Consensus 432 ~G~~~~~~~~~~~~~~~~~ 450 (605)
-|+++.++.++.+.++|..
T Consensus 300 YgiLFI~LTF~~fflfE~~ 318 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELL 318 (430)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4667777888888888764
No 317
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=20.48 E-value=7.8e+02 Score=26.69 Aligned_cols=130 Identities=16% Similarity=0.029 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhhhHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 007405 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-RYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (605)
Q Consensus 85 ~~~~~~~l~~yl~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (605)
.|+-....|.-.-..+|++.++...+++.-.+.+.+++++--..-- +.| |-+.++.+.+.++.-++...-. .
T Consensus 29 mfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~-~~g~~lP~~lG~sFafi~p~i~~~~~-~----- 101 (451)
T COG2233 29 MFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTG-PGGSGLPSYLGSSFAFVAPMIAIGGT-T----- 101 (451)
T ss_pred HHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-CcccCCCeeEechHHHHHHHHHHHhc-c-----
Confidence 3444444566667789999999999999988888888887765333 324 4555555555444333332221 0
Q ss_pred CCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 007405 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (605)
Q Consensus 164 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 243 (605)
+ ......+.+.+..|+..-...+.....+...|||-. -+... ..+|..
T Consensus 102 g--------------------~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvV------tG~Vi------~~IGls 149 (451)
T COG2233 102 G--------------------DGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVV------TGPVV------LVIGLS 149 (451)
T ss_pred C--------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCce------EEeEe------eeehhh
Confidence 0 123444555555554444333333227778888877 34432 235555
Q ss_pred HHHHHHHHHH
Q 007405 244 VAFTLVVYIQ 253 (605)
Q Consensus 244 i~p~i~~~l~ 253 (605)
+.|....+..
T Consensus 150 L~~vai~~~~ 159 (451)
T COG2233 150 LAPVAINMAG 159 (451)
T ss_pred hHHHHHHHhh
Confidence 5555555443
No 318
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=20.41 E-value=7e+02 Score=24.95 Aligned_cols=18 Identities=22% Similarity=-0.011 Sum_probs=9.7
Q ss_pred hHHHHHHHHHHHHHhhcc
Q 007405 186 QMLYLYTVLYITGFGAAG 203 (605)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~ 203 (605)
+.+.+.+..++.+++.++
T Consensus 22 ~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 22 YPWLLILVLALLTFFFGM 39 (284)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 345555555555555554
No 319
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=20.02 E-value=41 Score=34.40 Aligned_cols=59 Identities=15% Similarity=0.290 Sum_probs=3.8
Q ss_pred hHHHHHHHHHHHHHHhHhhhhhhHHHHHhhcchhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 007405 472 SAYWLLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIGSAYAALAGGLGCFAASILNS 530 (605)
Q Consensus 472 s~~~lv~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l~~~l~~ 530 (605)
+-++.++..+++|+..|......+.+..+.++++.|..+..+..+.-.+|-.+|+.+.-
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --------------------HHHH-----------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677788999999999999999999999999999999999999999888887753
Done!