Query 007406
Match_columns 605
No_of_seqs 209 out of 790
Neff 6.1
Searched_HMMs 29240
Date Tue Mar 26 01:01:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.8 1.9E-20 6.3E-25 176.4 11.3 112 467-587 8-120 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 3.6E-21 1.2E-25 205.2 4.3 153 432-601 296-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.7 8.8E-17 3E-21 151.4 11.4 125 422-570 23-150 (157)
4 3akh_A Putative secreted alpha 99.3 6.2E-12 2.1E-16 137.9 10.5 126 458-593 311-437 (468)
5 1wd3_A Alpha-L-arabinofuranosi 99.2 7.5E-11 2.6E-15 126.3 11.4 149 400-568 324-481 (482)
6 3akh_A Putative secreted alpha 99.1 3.7E-10 1.3E-14 123.7 11.8 135 408-568 322-459 (468)
7 1nc5_A Hypothetical protein YT 97.9 2.3E-05 7.8E-10 83.2 9.0 167 2-193 17-187 (373)
8 3k7x_A LIN0763 protein; Q92DQ0 97.8 2.4E-05 8.1E-10 82.6 6.2 137 24-183 45-184 (349)
9 2gz6_A N-acetyl-D-glucosamine 97.5 6.5E-05 2.2E-09 79.2 5.6 156 35-196 119-285 (388)
10 3pmm_A Putative cytoplasmic pr 97.3 0.00043 1.5E-08 73.8 8.6 142 33-193 70-214 (382)
11 3k7x_A LIN0763 protein; Q92DQ0 97.2 0.00037 1.3E-08 73.5 6.9 126 38-177 99-242 (349)
12 2gz6_A N-acetyl-D-glucosamine 97.0 0.00077 2.6E-08 70.9 7.2 179 38-222 179-377 (388)
13 2zbl_A Putative isomerase; N-a 96.3 0.013 4.6E-07 62.7 10.1 155 37-199 178-367 (421)
14 3gt5_A N-acetylglucosamine 2-e 96.2 0.0075 2.6E-07 64.3 7.5 157 38-197 120-296 (402)
15 3gt5_A N-acetylglucosamine 2-e 96.0 0.01 3.5E-07 63.2 7.6 134 37-177 179-339 (402)
16 2zzr_A Unsaturated glucuronyl 95.9 0.026 9E-07 60.4 10.1 133 38-179 180-341 (397)
17 2ahf_A Unsaturated glucuronyl 95.9 0.026 8.7E-07 60.1 9.7 133 38-179 155-316 (377)
18 3k11_A Putative glycosyl hydro 95.1 0.027 9.3E-07 61.2 6.9 145 33-193 84-248 (445)
19 2zzr_A Unsaturated glucuronyl 94.7 0.048 1.7E-06 58.4 7.3 125 36-166 251-392 (397)
20 2ahf_A Unsaturated glucuronyl 93.8 0.11 3.8E-06 55.2 7.8 125 36-166 226-367 (377)
21 2zbl_A Putative isomerase; N-a 93.4 0.097 3.3E-06 56.0 6.5 124 36-178 56-202 (421)
22 1nc5_A Hypothetical protein YT 93.3 0.15 5.2E-06 53.7 7.7 128 38-183 150-313 (373)
23 1fp3_A N-acyl-D-glucosamine 2- 91.9 0.13 4.6E-06 54.1 5.1 74 39-115 255-348 (402)
24 3pmm_A Putative cytoplasmic pr 90.6 0.24 8.2E-06 52.5 5.4 129 36-186 174-334 (382)
25 3h7l_A Endoglucanase; dehydrog 87.4 1.6 5.6E-05 48.8 9.4 162 31-202 304-498 (586)
26 1fp3_A N-acyl-D-glucosamine 2- 85.9 0.68 2.3E-05 48.7 5.1 106 90-199 256-365 (402)
27 2yug_A Protein FRG1; spliceoso 79.3 27 0.00093 32.0 12.7 92 418-533 34-127 (155)
28 1ia6_A Cellulase CEL9M; cellul 74.0 13 0.00046 39.9 10.3 140 38-201 215-356 (441)
29 1nxc_A Mannosyl-oligosaccharid 69.0 7.5 0.00026 42.4 6.9 150 30-187 172-346 (478)
30 1ks8_A Endo-B-1,4-glucanase; c 68.2 11 0.00038 40.4 8.0 134 38-201 217-352 (433)
31 3e6u_A LANC-like protein 1; al 68.1 6.5 0.00022 41.8 6.1 120 35-178 235-365 (411)
32 1g87_A Endocellulase 9G; endog 62.1 28 0.00096 39.1 10.1 72 38-114 216-290 (614)
33 3k11_A Putative glycosyl hydro 61.1 4.8 0.00016 43.6 3.5 101 84-195 85-191 (445)
34 2xfg_A Endoglucanase 1; hydrol 59.8 67 0.0023 34.7 12.3 72 38-114 238-313 (466)
35 1dl2_A Class I alpha-1,2-manno 56.4 13 0.00043 41.0 5.8 27 91-117 183-209 (511)
36 2g0d_A Nisin biosynthesis prot 53.0 38 0.0013 35.2 8.7 69 90-179 288-356 (409)
37 3e6u_A LANC-like protein 1; al 52.9 13 0.00046 39.3 5.2 77 34-116 292-370 (411)
38 1dl2_A Class I alpha-1,2-manno 50.1 16 0.00054 40.2 5.3 123 30-158 172-317 (511)
39 2kll_A Interleukin-33; beta-tr 48.2 1.5E+02 0.0053 26.6 15.4 113 404-533 20-134 (161)
40 1jlx_A Agglutinin, amaranthin, 45.6 2.2E+02 0.0075 29.0 12.3 31 500-532 92-123 (303)
41 2w87_A Esterase D, XYL-CBM35; 44.7 1E+02 0.0035 27.3 9.0 38 282-321 40-78 (139)
42 2w3j_A Carbohydrate binding mo 44.0 1.1E+02 0.0037 27.4 9.2 38 282-321 40-78 (145)
43 2v8i_A Pectate lyase; periplas 41.8 26 0.0009 38.0 5.2 86 38-126 380-470 (543)
44 1tf4_A T. fusca endo/EXO-cellu 41.4 36 0.0012 38.1 6.6 74 38-114 218-292 (605)
45 1x9d_A Endoplasmic reticulum m 41.1 29 0.001 38.4 5.6 95 87-185 175-271 (538)
46 1hcu_A Alpha-1,2-mannosidase; 40.5 12 0.00042 41.0 2.6 23 37-59 395-417 (503)
47 2ri9_A Mannosyl-oligosaccharid 39.8 74 0.0025 34.6 8.5 140 31-176 162-322 (475)
48 1hcu_A Alpha-1,2-mannosidase; 39.8 76 0.0026 34.7 8.7 141 30-176 175-335 (503)
49 3gzk_A Cellulase; fold from GH 39.2 61 0.0021 35.7 7.9 75 90-176 252-332 (537)
50 1nxc_A Mannosyl-oligosaccharid 37.7 35 0.0012 37.1 5.6 131 38-184 68-208 (478)
51 2ila_A Interleukin-1 alpha; cy 37.0 20 0.00068 33.2 3.0 26 516-545 114-139 (155)
52 2wry_A IL-1 beta, interleukin- 36.7 25 0.00086 32.8 3.7 36 505-545 111-146 (162)
53 2nvh_A IL-1 beta, interleukin- 36.2 16 0.00055 33.8 2.2 28 516-545 108-135 (153)
54 2g0d_A Nisin biosynthesis prot 36.1 24 0.00082 36.8 3.9 70 34-109 282-353 (409)
55 1md6_A Interleukin 1 family, m 35.7 15 0.00053 34.0 2.0 27 517-545 107-133 (154)
56 1x9d_A Endoplasmic reticulum m 32.6 76 0.0026 35.0 7.3 150 30-187 234-408 (538)
57 3llp_A Fascin; beta-trefoil, a 31.9 3E+02 0.01 29.9 11.8 51 477-533 226-276 (493)
58 1ilt_A Interleukin-1 receptor 31.8 18 0.00061 33.4 1.8 27 517-545 108-134 (152)
59 2w47_A Lipolytic enzyme, G-D-S 27.6 2.3E+02 0.0078 24.9 8.5 38 282-321 41-79 (144)
60 3ltq_A Interleukin-1 beta; lan 25.3 31 0.0011 32.5 2.1 28 516-545 126-153 (171)
61 1dm9_A Hypothetical 15.5 KD pr 24.6 91 0.0031 27.7 5.1 35 312-355 34-68 (133)
62 3h7l_A Endoglucanase; dehydrog 23.8 1.6E+02 0.0054 32.9 7.9 133 36-180 255-395 (586)
63 1i8d_A Riboflavin synthase; ri 23.6 1.6E+02 0.0055 28.5 6.9 55 296-350 21-90 (213)
64 2ri9_A Mannosyl-oligosaccharid 23.4 58 0.002 35.4 4.2 133 33-185 41-198 (475)
65 2x2s_A Agglutinin, agglutinin 23.0 1.4E+02 0.0047 27.4 5.8 45 500-545 92-138 (153)
66 4aw7_A GH86A beta-porphyranase 23.0 4.7E+02 0.016 29.1 11.3 42 282-325 490-534 (591)
67 3gzk_A Cellulase; fold from GH 22.9 1E+02 0.0035 33.8 6.2 76 34-111 246-334 (537)
68 4fbj_A CIF, hypothetical prote 21.7 39 0.0013 32.9 2.1 53 3-58 164-221 (261)
69 3ddy_A Lumazine protein, LUMP; 21.4 2.1E+02 0.0073 27.0 7.2 56 295-350 20-89 (186)
70 4f9p_D 103.2 anti-BTN3A1 antib 21.2 1.9E+02 0.0066 28.7 7.1 110 484-604 104-226 (254)
71 3a35_A Lumazine protein, LUMP; 21.0 1.5E+02 0.0052 28.1 6.1 53 297-350 22-89 (190)
72 2gjh_A Designed protein; oblig 20.5 26 0.0009 26.2 0.5 19 326-345 29-47 (62)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.83 E-value=1.9e-20 Score=176.42 Aligned_cols=112 Identities=19% Similarity=0.351 Sum_probs=98.2
Q ss_pred CceeeeccCCCCCceEEEecCceeEEEeCCCCCCCCceEEEeecCCCCC-CeeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 467 GKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKD-ETISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 467 g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-~~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
++.|+||+++.||+||||.+...+| +.++...+|++|++||||++++ |+|||||+++||+|||+. |..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~~~~--~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFDARI--DENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTEEEE--ESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCeEEE--ccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence 4589999999999999999855554 4456668899999999998765 899999999999999984 8899999
Q ss_pred eccCCCccccccccccccccCccccCcceEEEecCCCceeec
Q 007406 546 CSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLA 587 (605)
Q Consensus 546 ~~~~~~~~~f~~~asF~~~~gl~~~~~~Sf~a~g~~~~~ll~ 587 (605)
+ . ++++.|+++|+|+..+||++...+||++...++.||..
T Consensus 81 ~-~-~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh 120 (157)
T 3kmv_A 81 K-N-DGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH 120 (157)
T ss_dssp E-C-CSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred c-c-CCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence 6 3 66778999999999999999999999999999999976
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.81 E-value=3.6e-21 Score=205.23 Aligned_cols=153 Identities=19% Similarity=0.260 Sum_probs=126.4
Q ss_pred eecCCCCCcccccEEEEEEecCCCCccccccccCCCceeeeccCC--CCCceEEEecCceeEEEeCCCC---CCCCceEE
Q 007406 432 EKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFD--FPGMLVVQQGTDGELVVSDSPK---EGDSSVFR 506 (605)
Q Consensus 432 ~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd--~Pg~~v~~~~~~~~l~v~~~~~---~~~~s~f~ 506 (605)
...|..+||.++||+||.+ ....++....|.-..+..|+||+.+ +|++||||.+...+|.+..+.. ...+++|+
T Consensus 296 ~~~Psd~Td~aVqAnivAa-~y~~~s~~s~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~ 374 (482)
T 1wd3_A 296 SGYPSDDTENSVQENIVAA-KYVVGSLVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWT 374 (482)
T ss_dssp SSCCCHHHHHHHHHHHHHH-CEEECCCCCSSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEE
T ss_pred ecCCChHHHHHHhhceeee-eccCCccccCCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEE
Confidence 3468889999999999955 3222224566767889999999998 9999999998666665532222 24689999
Q ss_pred EeecCCCCCCeeEEEeccCCCeEEEeccccCCCCeEEEEeccCCCccccccccccccccCccccCcceEEEecCCCceee
Q 007406 507 LVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLL 586 (605)
Q Consensus 507 ~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asF~~~~gl~~~~~~Sf~a~g~~~~~ll 586 (605)
+||||++ +++|||||.++||+|||+. +.+|+|+ +. +.++.|+++|+|++++||++++ +||++.+
T Consensus 375 VVpGLAd-~g~VSFES~n~PG~YLRH~-----n~~LrL~-~~-DgS~~FrqDATF~~~~GL~~~g-vSFeS~n------- 438 (482)
T 1wd3_A 375 VVTGLAN-SQCFSFESVDTPGSYIRHY-----NFELLLN-AN-DGTKQFHEDATFCPQAALNGEG-TSLRSWS------- 438 (482)
T ss_dssp EEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEE-EC-CCCHHHHHHTCEEEEECTTSSS-EEEEESS-------
T ss_pred EeccccC-CCeEEEEecCCCCceEEEe-----CCEEEEe-cC-CCCcccccCceeEeccCCCCCc-eeEEEEC-------
Confidence 9999988 7999999999999999985 7899999 44 6677899999999999999988 9999998
Q ss_pred cccccccccceEEEE
Q 007406 587 APLLSFRDETYTVYF 601 (605)
Q Consensus 587 ~pl~~~~~~~~~~~~ 601 (605)
.|..-||++.|++|-
T Consensus 439 ~PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 439 YPTRYFRHYENVLYA 453 (482)
T ss_dssp STTCEEEEETTEEEE
T ss_pred CCCcEEEEeCCEEEE
Confidence 677778899999986
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.69 E-value=8.8e-17 Score=151.38 Aligned_cols=125 Identities=14% Similarity=0.254 Sum_probs=93.4
Q ss_pred EeccCCceeeeecCCCCCcccccEEEEEEecCCCCccccccccCCCceeeeccCCCCCceEEEecCceeEEEeCCCCC--
Q 007406 422 LSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKE-- 499 (605)
Q Consensus 422 ~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~-- 499 (605)
+...+..+.+.. +....-.|+||++.+-.++ .+-.|+||+.++||+||||.+. .|.++....+
T Consensus 23 lRh~~~~~~~~~----~~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh~~~--~l~L~~~~~s~~ 87 (157)
T 3kmv_A 23 IRHANFDARIDE----NVTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRHSNY--DLSLEKNDGTSL 87 (157)
T ss_dssp EEEETTEEEEES----SCSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEEETT--EEEEEECCSCHH
T ss_pred EEEeCCeEEEcc----CCCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEEeCC--EEEEeccCCCCC
Confidence 344556666554 3445778999999552322 1137999999999999999984 4555433332
Q ss_pred -CCCceEEEeecCCCCCCeeEEEeccCCCeEEEeccccCCCCeEEEEeccCCCccccccccccccccCcccc
Q 007406 500 -GDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEY 570 (605)
Q Consensus 500 -~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asF~~~~gl~~~ 570 (605)
..|++|++||||++ +|.|||||.++||||||+. |..|+|+|. +++.|+++|+|...+|.-+-
T Consensus 88 f~~dATF~~~~GLa~-~~~vSfeS~n~Pg~yLrh~-----~~~l~l~~~---~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 88 FAESATFKIVPGLAD-PSYISFQSYNFPTRYIRHY-----NYLLRLDEI---VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp HHHTTCEEEEECSSC-TTSEEEEESSSTTEEEEEE-----TTEEEEEEC---CSHHHHHHTCEEEEC-----
T ss_pred ccCCceEEEccCccC-CCcEEEEEEcCCCeEEEEE-----CCEEEEecC---CCchhccCCeEEEecCcchh
Confidence 47899999999988 6999999999999999985 889999973 67889999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.28 E-value=6.2e-12 Score=137.88 Aligned_cols=126 Identities=19% Similarity=0.255 Sum_probs=107.4
Q ss_pred cccccccCCCceeeeccCCCCCceEEEecCceeEEEeCCCCCCCCceEEEeecCCCCCCeeEEEeccCCCeEEEeccccC
Q 007406 458 EVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFN 537 (605)
Q Consensus 458 ~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~ 537 (605)
.+..|..++.+.+++++.+.||.+|+|.. ..|+++.+.....+++|++||||.+ .++|||||.++||.|||+.
T Consensus 311 ~~~~~~~~g~~~~s~~s~~~pg~ylrh~~--~~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~ypg~~lr~~---- 383 (468)
T 3akh_A 311 NFGIPVADGVTPVRFSSYNYPDRYIRHWD--FRARIEANVTNLADSQFRVVTGLAG-SGTISLESANYPGYYLRHK---- 383 (468)
T ss_dssp ECCCCCCSEECCBCEEESSSTTCEEEEET--TEEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSSTTEEEEEE----
T ss_pred EeccccccCccccccccccccccEEEEec--CcEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCCCeEEEEE----
Confidence 46677767777889999999999999987 5677776655678999999999977 5999999999999999985
Q ss_pred CCCeEEEEeccCCCccccccccccccccCcccc-CcceEEEecCCCceeeccccccc
Q 007406 538 SGASLKLSCSTESSEDGFNEAVSFVMEKGISEY-HPISFVAKGARRNFLLAPLLSFR 593 (605)
Q Consensus 538 ~g~~~~~~~~~~~~~~~f~~~asF~~~~gl~~~-~~~Sf~a~g~~~~~ll~pl~~~~ 593 (605)
+..|+|+ +. .+++.|+++|+|++++||++- ..+||++...+..||.+==++|+
T Consensus 384 -~~~~~~~-~~-~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 384 -NYEVWVE-KN-DGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp -TTEEEEE-EC-CSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred -CCEEEEe-cC-CCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 6799999 43 666889999999999999997 89999999999999986544444
No 5
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.17 E-value=7.5e-11 Score=126.28 Aligned_cols=149 Identities=18% Similarity=0.273 Sum_probs=109.5
Q ss_pred ccCCCCCceeeeeecc-CCceEEEeccCCceeeeecCCC-CCcccccEEEEEEecCCCCccccccccCCCceeeeccCCC
Q 007406 400 IPASYNGQLVTFAQES-GDSAFVLSNSNQSITMEKFPES-GTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDF 477 (605)
Q Consensus 400 ~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~p~~-g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~ 477 (605)
.|.......++|+-.+ +-+.+.|.+.++.+.+++.... .+...-+|+|+++.+-.+ ...|+||+.+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd-----------~g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-----------SQCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-----------TTSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEeccccC-----------CCeEEEEecCC
Confidence 4444456788886654 3445566688888887764322 334466899999865222 23689999999
Q ss_pred CCceEEEecCceeEEEeCCCC---CCCCceEEEeecCCCCCCeeEEEeccCCCeEEEeccccCCCCeEEEEec----cCC
Q 007406 478 PGMLVVQQGTDGELVVSDSPK---EGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCS----TES 550 (605)
Q Consensus 478 Pg~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~----~~~ 550 (605)
||.||||.+ ..|+|+.... -..|+.|++++||.+ .| |||||.+.||.|||+. +..|+|.-. ..+
T Consensus 393 PG~YLRH~n--~~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH~-----n~~Lyla~~gg~~~~d 463 (482)
T 1wd3_A 393 PGSYIRHYN--FELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRHY-----ENVLYAASNGGVQTFD 463 (482)
T ss_dssp TTEEEEEET--TEEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEEE-----TTEEEEECSSCSSGGG
T ss_pred CCceEEEeC--CEEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEEe-----CCEEEEecCCCccccc
Confidence 999999997 6777764332 126899999999988 46 9999999999999985 679999621 113
Q ss_pred CccccccccccccccCcc
Q 007406 551 SEDGFNEAVSFVMEKGIS 568 (605)
Q Consensus 551 ~~~~f~~~asF~~~~gl~ 568 (605)
+.+.|++++||+...|++
T Consensus 464 ~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 464 SKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp CSTTHHHHTCEEEEECTT
T ss_pred CcccccCCceEEeccCCC
Confidence 466799999999998876
No 6
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.07 E-value=3.7e-10 Score=123.74 Aligned_cols=135 Identities=19% Similarity=0.230 Sum_probs=96.8
Q ss_pred eeeeeeccCCceEEEeccCCceeeeecCCCCCcccccEEEEEEecCCCCccccccccCCCceeeeccCCCCCceEEEecC
Q 007406 408 LVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGT 487 (605)
Q Consensus 408 ~~~~~~~~~~~~f~~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~ 487 (605)
+++|....-...|. .+.++.|.++.- ++ ....++||++.+-. +...++||..++||.||||++
T Consensus 322 ~~s~~s~~~pg~yl-rh~~~~v~l~~~---~~-~~~d~tf~~~~gl~-----------~~~~~s~~s~~ypg~~lr~~~- 384 (468)
T 3akh_A 322 PVRFSSYNYPDRYI-RHWDFRARIEAN---VT-NLADSQFRVVTGLA-----------GSGTISLESANYPGYYLRHKN- 384 (468)
T ss_dssp CBCEEESSSTTCEE-EEETTEEEEESS---CS-SGGGGCEEEEECTT-----------CTTCEEEEESSSTTEEEEEET-
T ss_pred ccccccccccccEE-EEecCcEEEccC---CC-CcccceEEEccCCC-----------CCceEEEEEEeCCCeEEEEEC-
Confidence 34454433223454 466778887752 22 36899999884311 123589999999999999998
Q ss_pred ceeEEEeCCCC---CCCCceEEEeecCCCCCCeeEEEeccCCCeEEEeccccCCCCeEEEEeccCCCccccccccccccc
Q 007406 488 DGELVVSDSPK---EGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVME 564 (605)
Q Consensus 488 ~~~l~v~~~~~---~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asF~~~ 564 (605)
..|+++.... -..|+.|++||||++..+.|||||.+.||.|||+. +..|+|+ +. +++.|+++|+|...
T Consensus 385 -~~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~-----~~~l~~~-~~--~~~~~~~~atf~~~ 455 (468)
T 3akh_A 385 -YEVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHY-----ENLLRIQ-PV--STALDRQDATFYAE 455 (468)
T ss_dssp -TEEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEE-----TTEEEEE-EC--CSHHHHHHTCEEEC
T ss_pred -CEEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEe-----CCeEEEc-cC--CCchhcccceeeec
Confidence 5666653322 13689999999998844899999999999999985 6789999 43 35679999999998
Q ss_pred cCcc
Q 007406 565 KGIS 568 (605)
Q Consensus 565 ~gl~ 568 (605)
.++.
T Consensus 456 ~~~~ 459 (468)
T 3akh_A 456 KLAA 459 (468)
T ss_dssp C---
T ss_pred cchh
Confidence 8864
No 7
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.90 E-value=2.3e-05 Score=83.24 Aligned_cols=167 Identities=13% Similarity=0.044 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHhhhhhccccHHHH-HHHhhhcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCC--cc
Q 007406 2 TKWMVEYFYNRVQNVITKYSVERH-WNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDIS--GF 78 (605)
Q Consensus 2 ~~~m~~~~~~r~~~~~~~~~~~~~-~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~--g~ 78 (605)
+.+|+||+.+|-...++.. ...| |. .|-|..+|.++|++|||++|++.|+...+.-+ .. .+ .+. ..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~-~~~W~w~-----~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~-~~--~g--~l~~~~~ 85 (373)
T 1nc5_A 17 AEALANTIMNTYTVEELPP-ANRWHYH-----QGVFLCGVLRLWEATGEKRYFEYAKAYADLLI-DD--NG--NLLFRRD 85 (373)
T ss_dssp HHHHHHHHHHHCCTTTSSS-TTCCCHH-----HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB-CT--TC--CBCCCTT
T ss_pred HHHHHHHHHHhCCCcccCC-CCCcchh-----HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh-CC--CC--cccCCCC
Confidence 3567777766533211110 1111 22 57778999999999999999999987643211 10 00 010 00
Q ss_pred ccccccceeehhhhHHHHhCCchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchh-hHHHHHH
Q 007406 79 HANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTT-YNMLKVS 157 (605)
Q Consensus 79 HanthiP~~~G~a~~Y~~TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas-~nmlkl~ 157 (605)
+ -.+..+..+++.+|++|||++|++++...++.+.. + +-++ .+-+|..+. ....+-|.. +=.+-+.
T Consensus 86 ~-lDd~~~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~-~-~r~~---~G~fw~~~~-------~~~~~w~D~l~m~~p~L 152 (373)
T 1nc5_A 86 E-LDAIQAGLILFPLYEQTKDERYVKAAKRLRSLYGT-L-NRTS---EGGFWHKDG-------YPYQMWLDGLYMGGPFA 152 (373)
T ss_dssp C-GGGTGGGGGHHHHHHHHCCHHHHHHHHHHHGGGGT-S-CBCT---TSCBCSCTT-------STTEEETHHHHHHHHHH
T ss_pred C-cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-c-cCCC---CCCeeccCC-------CCCeEEeCcHHHHHHHH
Confidence 1 12233556788999999999999999999999853 2 2222 112243211 111222333 2123456
Q ss_pred HHHHhccCCCchHHHHHHHHhcccccccCCCCCCcE
Q 007406 158 RHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVM 193 (605)
Q Consensus 158 ~~Lf~~tgD~~YaD~~ERalyN~ila~q~~~~~g~~ 193 (605)
-+|.++|||++|.|..++.+-...--..++ +.|.+
T Consensus 153 ~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~tGl~ 187 (373)
T 1nc5_A 153 LKYANLKQETELFDQVVLQESLMRKHTKDA-KTGLF 187 (373)
T ss_dssp HHHHHHHTCTHHHHHHHHHHHHHHHHHBCT-TTSCB
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHhcCC-CCCCE
Confidence 778999999999999999776555444554 44544
No 8
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.76 E-value=2.4e-05 Score=82.62 Aligned_cols=137 Identities=13% Similarity=0.143 Sum_probs=90.1
Q ss_pred HHHHHhhhcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccc-eeehhhhHHHHhCCchH
Q 007406 24 RHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIP-VVIGSQMRYEVTGDPLY 102 (605)
Q Consensus 24 ~~~~~l~~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP-~~~G~a~~Y~~TGd~~y 102 (605)
.||. +||..+|.+.|+.|||++|+++|+.... +. ...+.+.+...+ +..+- .+.++...|++|||+.|
T Consensus 45 yWW~------a~~~~~l~d~~~~tgd~~y~~~a~~~~~--~~--~~~~~~~~~~~~-~DD~a~~~la~~~aye~t~~~~y 113 (349)
T 3k7x_A 45 YWWL------AHLVEVRLDAYLRTKKQADLEVAEKTYL--HN--KNRNGGTLIHDF-YDDMLWNALAAYRLYKATGKSIY 113 (349)
T ss_dssp HHHH------HHHHHHHHHHHHHHCCHHHHHHHHHHHH--HH--HHHTTSSSCCSB-HHHHHHHHHHHHHHHHHHCCHHH
T ss_pred ccHH------HHHHHHHHHHHHHhCCHHHHHHHHHHHH--HH--HhcCCCCCCccC-ccHHHHHHHHHHHHHHHHCCchH
Confidence 4776 4667999999999999999999997532 00 011112221111 11122 34678889999999999
Q ss_pred HHHHHHHHHHhhccCeEe--ecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHHhcc
Q 007406 103 KVTGTFFMDIVNASHGYA--TGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNG 180 (605)
Q Consensus 103 ~~aa~~fw~~v~~~h~y~--TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~ 180 (605)
++.|+..++.+...+--. .||+ +|..+. ..+--+|+.--++.+.-+|++.|+|.+|.|..|+++ +-
T Consensus 114 L~~A~~l~~~l~~~~wd~~~gGGi----~W~~~~-------~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~-~w 181 (349)
T 3k7x_A 114 LEDAQLVWQDLVDTGWNDIMGGGF----AWRRPQ-------MYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTY-EW 181 (349)
T ss_dssp HHHHHHHHHHHHHHTBCSGGGSCB----EEETTE-------EEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCce----EecCCC-------ccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HH
Confidence 999999999883222222 2444 343321 123445666667788889999999999999999764 34
Q ss_pred ccc
Q 007406 181 VLS 183 (605)
Q Consensus 181 ila 183 (605)
+..
T Consensus 182 ~~~ 184 (349)
T 3k7x_A 182 QTK 184 (349)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.53 E-value=6.5e-05 Score=79.22 Aligned_cols=156 Identities=6% Similarity=-0.185 Sum_probs=89.7
Q ss_pred chhHHHHHHHHHcCCHHHHHHHhhccc---CCcchhh------hhcCCCCCccccccccceeehhhhHHHHhCCchHHHH
Q 007406 35 GMNDVLYRLYTITQDPKHLLLAHLFDK---PCFLGLL------AVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVT 105 (605)
Q Consensus 35 Gmne~L~~LY~~TGd~~yL~lA~~F~~---~~~~~~l------~~~~D~l~g~HanthiP~~~G~a~~Y~~TGd~~y~~a 105 (605)
=|..+|.++|+.|||++||+.|+...+ ..+.++. ......+.+ .+.+.-.+.+++.+|++|+|+.|++.
T Consensus 119 f~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~--~~~~~~~~~all~l~~~t~d~~~~~~ 196 (388)
T 2gz6_A 119 FAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKA--LAVPMILANLTLEMEWLLPQETLENV 196 (388)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC--------------CCCCEE--THHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCC--CCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 355899999999999999999988632 1221110 000001111 11222234567788999999999999
Q ss_pred HHHHHHHhhccCeEe--ecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHHhccccc
Q 007406 106 GTFFMDIVNASHGYA--TGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLS 183 (605)
Q Consensus 106 a~~fw~~v~~~h~y~--TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~ila 183 (605)
++...+.+.+ +.+- .|++ .|+|...............+-....++..+.-++.+++||.+|.+..++.+=..+--
T Consensus 197 A~~~~~~~~~-~~~~~~~g~~--~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~ 273 (388)
T 2gz6_A 197 LAATVQEVMG-DFLDQEQGLM--YENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNF 273 (388)
T ss_dssp HHHHHHHHHH-TTEETTTTEE--CSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHhccCCCeE--EEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999999875 4332 2332 233332211101001122343444566667778888899999999988776544333
Q ss_pred ccCCCCCCcEEEe
Q 007406 184 IQRGTEPGVMIYM 196 (605)
Q Consensus 184 ~q~~~~~g~~~Y~ 196 (605)
+.++ +.|.++|.
T Consensus 274 g~d~-~~Gg~~~~ 285 (388)
T 2gz6_A 274 AWDN-EYGGLYYF 285 (388)
T ss_dssp HBCT-TTCSBCSC
T ss_pred hccC-CCCCEEEe
Confidence 4454 43455543
No 10
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.31 E-value=0.00043 Score=73.83 Aligned_cols=142 Identities=15% Similarity=0.073 Sum_probs=87.5
Q ss_pred ccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccceeehhhhHHHHhCCchHHHHHHHHHHH
Q 007406 33 TGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDI 112 (605)
Q Consensus 33 ~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~~~G~a~~Y~~TGd~~y~~aa~~fw~~ 112 (605)
.|-|..+|.++|++|||++|++.|+.+.+.. +. .+ .. ..|.++.-+ ...++..|+.|||++|++++..+.+.
T Consensus 70 ~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~-~~---~~-~~--~~n~D~~~~-~~~l~~lY~~Tgd~~Yl~~a~~~ad~ 141 (382)
T 3pmm_A 70 HGVGLYGIYQYYQQTGDIEMRDIIDRWFADR-FA---EG-AT--TKNVNTMAP-FLTLAYRFEETGRMAYLPWLESWAEW 141 (382)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HH---HC-CC--CCCTTTTTT-HHHHHHHHHHHCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-Hc---CC-CC--cCcccchHH-HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4777899999999999999999999865421 11 11 11 123233322 34678999999999999999999998
Q ss_pred hhccC-eEeecCCCCCCCCCCCccccccCCCCccccchh--hHHHHHHHHHHhccCCCchHHHHHHHHhcccccccCCCC
Q 007406 113 VNASH-GYATGGTSAGEFWSDPKRLASTLGTENEESCTT--YNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTE 189 (605)
Q Consensus 113 v~~~h-~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas--~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~ila~q~~~~ 189 (605)
+..+. --..||+-.. ... . ...+.-=|.. .++. +.-++.+.|||++|.|...+-+....--..++ +
T Consensus 142 L~~~~~r~~~Ggf~~~-----~~~--~--~~~~~~WiDgl~M~~p-~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~-~ 210 (382)
T 3pmm_A 142 AMHEMPRTEQGGMQHM-----TLA--E--ENHQQMWDDTLMMTVL-PLAKIGKLLNRPQYVEEATYQFLLHVQNLMDR-E 210 (382)
T ss_dssp HHHTSCBCGGGCBCCC-----CSS--C--CCTTEEETTHHHHTHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCT-T
T ss_pred HHhhCCCCcCCCeeee-----cCC--C--CCCCcEEecchhhhHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHccCC-C
Confidence 86432 1244555321 000 0 0011111221 2332 44678899999999998877666554444454 4
Q ss_pred CCcE
Q 007406 190 PGVM 193 (605)
Q Consensus 190 ~g~~ 193 (605)
.|.+
T Consensus 211 tGl~ 214 (382)
T 3pmm_A 211 TGLW 214 (382)
T ss_dssp TSCB
T ss_pred CCCe
Confidence 4443
No 11
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.23 E-value=0.00037 Score=73.51 Aligned_cols=126 Identities=24% Similarity=0.206 Sum_probs=77.8
Q ss_pred HHHHHHHHHcCCHHHHHHHhhccc----CCcchhhhhcCCCCCccccc----------cccceeehhhhHHHHhCCchHH
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDK----PCFLGLLAVQADDISGFHAN----------THIPVVIGSQMRYEVTGDPLYK 103 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~----~~~~~~l~~~~D~l~g~Han----------thiP~~~G~a~~Y~~TGd~~y~ 103 (605)
.++.++|++|||++||++|+..-+ ..+.++.. .|+.-+ +.-+.+..++++|++|||+.|+
T Consensus 99 la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~g------GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl 172 (349)
T 3k7x_A 99 LAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMG------GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYL 172 (349)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGG------SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCC------CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHH
Confidence 689999999999999999986521 11111110 122111 2223345678899999999999
Q ss_pred HHHHHHHHHhhccCeEe-ecCCCCCCCCCCCccccccCCCCccccchhhH---HHHHHHHHHhccCCCchHHHHHHHH
Q 007406 104 VTGTFFMDIVNASHGYA-TGGTSAGEFWSDPKRLASTLGTENEESCTTYN---MLKVSRHLFRWTKEMVYADYYERAL 177 (605)
Q Consensus 104 ~aa~~fw~~v~~~h~y~-TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~n---mlkl~~~Lf~~tgD~~YaD~~ERal 177 (605)
+.|+..|+.+.+ +++- .|.+-.++. ... ......+..=+|| +|.-+-.|++.|+|++|.+..++.+
T Consensus 173 ~~A~~~~~w~~~-~l~d~~g~v~Dg~~------~~~-~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 173 EWAMKTYEWQTK-VLVREDGFVEDGIN------RLE-DGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HHHHHHHHHHHH-HHBCTTSCBCCEEC------TTS-SSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCCCCeEecCCc------cCC-CCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 999999999975 4432 122211110 000 0001112233333 5666788999999999999998765
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.05 E-value=0.00077 Score=70.93 Aligned_cols=179 Identities=11% Similarity=-0.053 Sum_probs=94.4
Q ss_pred HHHHHHHHHcCCHHHHHHHhhccc---CCcchhhh----h--cCC--CCCccccccccce--ee---hhhhHHHHhCCch
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDK---PCFLGLLA----V--QAD--DISGFHANTHIPV--VI---GSQMRYEVTGDPL 101 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~---~~~~~~l~----~--~~D--~l~g~HanthiP~--~~---G~a~~Y~~TGd~~ 101 (605)
++|.+||++|||++|++.|+...+ ..|.++.. . ..| .+.......-.|- ++ -..+.+++|||+.
T Consensus 179 ~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~ 258 (388)
T 2gz6_A 179 NLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSK 258 (388)
T ss_dssp HHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHH
Confidence 788999999999999999887632 11221110 0 000 0000000111110 11 1345578999999
Q ss_pred HHHHHHHHHHHhhccCeEe--ecCCCCCCCC-CCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHHh
Q 007406 102 YKVTGTFFMDIVNASHGYA--TGGTSAGEFW-SDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALT 178 (605)
Q Consensus 102 y~~aa~~fw~~v~~~h~y~--TGG~g~~E~f-~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERaly 178 (605)
|+++|+..++.+.+ +.+- +||+-..-.+ +.| ...+.....-.+...+.+.-.-.+++.|||.+|.+.+++..
T Consensus 259 ~~~~A~~~~~~~~~-~g~d~~~Gg~~~~~~~~g~~---~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~- 333 (388)
T 2gz6_A 259 TINQAVDVVLNILN-FAWDNEYGGLYYFMDAAGHP---PQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMH- 333 (388)
T ss_dssp HHHHHHHHHHHHHH-HHBCTTTCSBCSCEETTSCC---CSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHH-HhccCCCCCEEEeecCCCCc---cccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-
Confidence 99999888888754 3221 2444321111 111 00001133344666778888888999999999999998853
Q ss_pred cccccc-cCCCCCCcEEEeccCCCCCCCCcCCCCCCCccCccccc
Q 007406 179 NGVLSI-QRGTEPGVMIYMLPLGRGDSKAKSYHGWGTRFSSFWCC 222 (605)
Q Consensus 179 N~ila~-q~~~~~g~~~Y~~pL~~g~~k~~~~~~~~~~~~~f~CC 222 (605)
+-+... .++..++.|.+..+-+.... ......|-.+++.+.||
T Consensus 334 ~~~~~~~~D~~~G~w~~~l~~~g~~~~-~~~~~~~K~~YH~~~~~ 377 (388)
T 2gz6_A 334 DYSWQHFADPEYGEWFGYLNRRGEVLL-NLKGGKWKGCFHVPRAM 377 (388)
T ss_dssp HHHHHHHBCTTTSSBCCEECTTSCBSS-CBSCCSSCSSSHHHHHH
T ss_pred HHHHHhCcCCCCCceEEeeCCCcCCCC-cCCCCCCCCCcchHHHH
Confidence 222222 23334455666655432111 11112344456655555
No 13
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=96.27 E-value=0.013 Score=62.69 Aligned_cols=155 Identities=12% Similarity=0.029 Sum_probs=86.8
Q ss_pred hHHHHHHHHHcCCHHHHHHHhhccc---CCcch----hhh----hcCCCCCcc----cccccc-----c--e---eehhh
Q 007406 37 NDVLYRLYTITQDPKHLLLAHLFDK---PCFLG----LLA----VQADDISGF----HANTHI-----P--V---VIGSQ 91 (605)
Q Consensus 37 ne~L~~LY~~TGd~~yL~lA~~F~~---~~~~~----~l~----~~~D~l~g~----Hanthi-----P--~---~~G~a 91 (605)
.++|.+||++|||++|++.|+...+ ..+.. .+. .+...+.+. -.+... | . +-+.+
T Consensus 178 ~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl 257 (421)
T 2zbl_A 178 VEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLML 257 (421)
T ss_dssp HHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHH
Confidence 4889999999999999987766521 11111 010 000001000 000011 1 0 11346
Q ss_pred hHHHHh---CC--c-hHHHHHHHHHHHhhccCeEe-e--cCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHh
Q 007406 92 MRYEVT---GD--P-LYKVTGTFFMDIVNASHGYA-T--GGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFR 162 (605)
Q Consensus 92 ~~Y~~T---Gd--~-~y~~aa~~fw~~v~~~h~y~-T--GG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~ 162 (605)
+.|+++ || + .|++.|...++.+.+ +.+- . ||.--. ..+ .+.+.....+.+..-++++-.-.|++
T Consensus 258 ~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~-~g~d~~~~GG~~~~---~~~---~g~~~~~~k~~w~~aea~~all~l~~ 330 (421)
T 2zbl_A 258 HLHAALEARFETPPAWLLEDAKGLFHATIR-DAWAPDGADGFVYS---VDW---DGKPIVRERVRWPIVEAMGTAYALYT 330 (421)
T ss_dssp HHHHHHHHTTCCCCTHHHHHHHHHHHHHHH-HHBSCSSSSSBCSC---BCT---TSCBSCCCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHcccccccchHHHHHHHHHHHHHHHH-HhcCCCCCCcEEEe---ecC---CCCccCCCcccHHHHHHHHHHHHHHH
Confidence 678998 66 5 899999999998864 4543 2 443211 111 11112345556666777778888999
Q ss_pred ccCCCchHHHHHHHHhccccccc-CCCCCCcEEEeccC
Q 007406 163 WTKEMVYADYYERALTNGVLSIQ-RGTEPGVMIYMLPL 199 (605)
Q Consensus 163 ~tgD~~YaD~~ERalyN~ila~q-~~~~~g~~~Y~~pL 199 (605)
.|||.+|.+.+++. .+.+.... ++..++.+.+..+-
T Consensus 331 ~tgd~~yl~~a~~~-~~~~~~~~~d~~~G~w~~~l~~~ 367 (421)
T 2zbl_A 331 LTDDSQYEEWYQKW-WDYCIKYLMDYENGSWWQELDAD 367 (421)
T ss_dssp HHCCHHHHHHHHHH-HHHHHHHTBCTTTSSBCSEECTT
T ss_pred HhCCHHHHHHHHHH-HHHHHHhCCCCCCCeeEeeECcC
Confidence 99999999999885 33333322 22233445555444
No 14
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.17 E-value=0.0075 Score=64.28 Aligned_cols=157 Identities=10% Similarity=-0.046 Sum_probs=90.5
Q ss_pred HHHHHHHHHcCCHHHHHHHhhccc---CCcchhhhh------cCC-CCCc-cccccccceeehhhhHHHHhCCchHHHHH
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDK---PCFLGLLAV------QAD-DISG-FHANTHIPVVIGSQMRYEVTGDPLYKVTG 106 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~---~~~~~~l~~------~~D-~l~g-~HanthiP~~~G~a~~Y~~TGd~~y~~aa 106 (605)
.+|.+ |..|||++||++|+...+ ..|.++... ..+ .+.. .-.|.|.-++..+..+|++|||+.|++.+
T Consensus 120 ~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a 198 (402)
T 3gt5_A 120 LAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERA 198 (402)
T ss_dssp HHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 68889 778999999999987632 122222110 001 0100 01233333455678889999999999999
Q ss_pred HHHHHHhhccCeEeecCCCCCCCCCCCcccc-cc--------CCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHH
Q 007406 107 TFFMDIVNASHGYATGGTSAGEFWSDPKRLA-ST--------LGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERAL 177 (605)
Q Consensus 107 ~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~-~~--------l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERal 177 (605)
+...+.+.+ +.+---+-.-.|+|..+.... +. ....+.+.=-.+++..+.-++.+.+++.+|.+..++.+
T Consensus 199 ~~l~~~~~~-~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~ 277 (402)
T 3gt5_A 199 LVLADRITR-RQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLF 277 (402)
T ss_dssp HHHHHHHHT-HHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHH
T ss_pred HHHHHHHHH-HhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 999998864 433221113346665333210 00 00001222233556666777777899999999999876
Q ss_pred hcccccccCCCCCCcEEEec
Q 007406 178 TNGVLSIQRGTEPGVMIYML 197 (605)
Q Consensus 178 yN~ila~q~~~~~g~~~Y~~ 197 (605)
=..+--+.++ +.|.++|..
T Consensus 278 ~~~~~~gwd~-~~Gg~~~~~ 296 (402)
T 3gt5_A 278 DVAVARSWDA-VRGGLCYGF 296 (402)
T ss_dssp HHHHHHHBCT-TTCSBCSEE
T ss_pred HHHHHhcccC-CCCcEEEEE
Confidence 4333335554 456666654
No 15
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.02 E-value=0.01 Score=63.20 Aligned_cols=134 Identities=14% Similarity=0.155 Sum_probs=81.9
Q ss_pred hHHHHHHHHHcCCHHHHHHHhhccc---CCcchhh----hhcCC-CCC-ccccccccc--------eeehh--------h
Q 007406 37 NDVLYRLYTITQDPKHLLLAHLFDK---PCFLGLL----AVQAD-DIS-GFHANTHIP--------VVIGS--------Q 91 (605)
Q Consensus 37 ne~L~~LY~~TGd~~yL~lA~~F~~---~~~~~~l----~~~~D-~l~-g~HanthiP--------~~~G~--------a 91 (605)
.+++.+||++|||++|++.|+...+ ..|.++. .+.-+ +.. ....|..-| +--|| .
T Consensus 179 ~eall~L~~~tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl 258 (402)
T 3gt5_A 179 CEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLL 258 (402)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHH
Confidence 3789999999999999999987632 1122211 00000 000 000011111 22354 4
Q ss_pred hHHHHhCCchHHHHHHHHHHHhhccCeEe--ecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCch
Q 007406 92 MRYEVTGDPLYKVTGTFFMDIVNASHGYA--TGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVY 169 (605)
Q Consensus 92 ~~Y~~TGd~~y~~aa~~fw~~v~~~h~y~--TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~Y 169 (605)
+.+++++++.|++.|+..++.+.+ +.+- .||+-.. ..++ +.........+...+.|.-.-.|++.|||.+|
T Consensus 259 ~~~~~~~~~~~~~~A~~l~~~~~~-~gwd~~~Gg~~~~---~d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~y 331 (402)
T 3gt5_A 259 ILDRYIEVEWLVPVARSLFDVAVA-RSWDAVRGGLCYG---FAPD---GTICDDDKYFWVQAESLAAAALLATRSGDERY 331 (402)
T ss_dssp HHHHHCCCTTHHHHHHHHHHHHHH-HHBCTTTCSBCSE---ECTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHH-hcccCCCCcEEEE---EcCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHH
Confidence 557889999999999998888754 3332 3555321 0111 11113455677778888888899999999999
Q ss_pred HHHHHHHH
Q 007406 170 ADYYERAL 177 (605)
Q Consensus 170 aD~~ERal 177 (605)
.+.+++..
T Consensus 332 l~~a~~~~ 339 (402)
T 3gt5_A 332 WQWYDRLW 339 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998875
No 16
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=95.90 E-value=0.026 Score=60.43 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=74.2
Q ss_pred HHHHHHHHHcCCHHHHHHHhhc-c--cCCcchh---hh--hcCCCCCcc--ccccc-------------cceeehhhhHH
Q 007406 38 DVLYRLYTITQDPKHLLLAHLF-D--KPCFLGL---LA--VQADDISGF--HANTH-------------IPVVIGSQMRY 94 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F-~--~~~~~~~---l~--~~~D~l~g~--Hanth-------------iP~~~G~a~~Y 94 (605)
+.|++.+++|||++|++.|..- + -...+.+ +. ..-|...|. |-.++ -=.+.|.+..|
T Consensus 180 ~~L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY 259 (397)
T 2zzr_A 180 QLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSY 259 (397)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHH
Confidence 7899999999999999999852 1 0011100 00 001111111 10111 11357788999
Q ss_pred HHhCCchHHHHHHHHHHHhhccCeEeecCCCCCCCCC-CCccccccCCCCccccchhhHHHHHHHHHHhccCC---Cc--
Q 007406 95 EVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWS-DPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE---MV-- 168 (605)
Q Consensus 95 ~~TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~-~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD---~~-- 168 (605)
+.|+|+.|++.|+..-+.+.+ |. .-.|+. +|. ..+.++....+...-.+++.++++ |.+++++ .+
T Consensus 260 ~~T~d~~yL~~A~~la~~~l~-~~-~~d~~p---ywdt~~~~~~~~~~D~Sa~aiaA~~Ll~----L~~~~~~~~~~~~~ 330 (397)
T 2zzr_A 260 RKMKDYQQIILFKGMTNYFLN-RL-PEDKVS---YWDLIFTDGSGQPRDTSATATAVCGIHE----MLKYLPEVDPDKET 330 (397)
T ss_dssp HHHCCHHHHHHHHHHHHHHHH-TC-CTTSCC---BSBTTCCTTSCCCBCHHHHHHHHHHHHH----HHTTSCTTCTTHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHH-hh-HHhCCc---cccCCCCCCCCCcCCCCHHHHHHHHHHH----HHHhcCccchhhHH
Confidence 999999999999999888875 43 322221 332 111122211122233344455555 4555665 67
Q ss_pred hHHHHHHHHhc
Q 007406 169 YADYYERALTN 179 (605)
Q Consensus 169 YaD~~ERalyN 179 (605)
|.+..|++|=.
T Consensus 331 Y~~~A~~~l~~ 341 (397)
T 2zzr_A 331 YKYAMHTMLRS 341 (397)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887754
No 17
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=95.86 E-value=0.026 Score=60.11 Aligned_cols=133 Identities=15% Similarity=0.111 Sum_probs=75.1
Q ss_pred HHHHHHHHHcCCHHHHHHHhhc-c--cCCcchh---hh--hcCCCCCcc--cccccc-------------ceeehhhhHH
Q 007406 38 DVLYRLYTITQDPKHLLLAHLF-D--KPCFLGL---LA--VQADDISGF--HANTHI-------------PVVIGSQMRY 94 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F-~--~~~~~~~---l~--~~~D~l~g~--Hanthi-------------P~~~G~a~~Y 94 (605)
+.|++.+++|||++|++.|..- + -...+.+ +. ...|...|. |-.++- =.+.|.+..|
T Consensus 155 ~~L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly 234 (377)
T 2ahf_A 155 PLLLWAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNS 234 (377)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHH
Confidence 6999999999999999999982 1 1111100 00 001111111 111211 1357889999
Q ss_pred HHhCCchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCC-ccccccCCCCccccchhhHHHHHHHHHHhccC-----CCc
Q 007406 95 EVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDP-KRLASTLGTENEESCTTYNMLKVSRHLFRWTK-----EMV 168 (605)
Q Consensus 95 ~~TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p-~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tg-----D~~ 168 (605)
+.|+|++|++.|+..-+.+.++ . .-.|+. +|.-. ..++....+...-.+++.+++++++ +++ +.+
T Consensus 235 ~~T~d~~yL~~A~~la~~~l~~-~-~~d~~p---ywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~----~~~~~~~~~~~ 305 (377)
T 2ahf_A 235 RYLGNADLLETAKRMARHFLAR-V-PEDGVV---YWDFEVPQEPSSYRDSSASAITACGLLEIAS----QLDESDPERQR 305 (377)
T ss_dssp HHHTCHHHHHHHHHHHHHHHTT-C-CTTSSC---BSBTTSCCCTTSCBCHHHHHHHHHHHHHHHH----TSCTTCHHHHH
T ss_pred HHHCChHHHHHHHHHHHHHHHh-h-HHhCCc---ccccCCCccCCCccCCCHHHHHHHHHHHHHH----hcCccccchHH
Confidence 9999999999999998888754 3 221211 33211 1122111112223445566665544 454 577
Q ss_pred hHHHHHHHHhc
Q 007406 169 YADYYERALTN 179 (605)
Q Consensus 169 YaD~~ERalyN 179 (605)
|.+..|+++=.
T Consensus 306 Y~~~A~~~l~~ 316 (377)
T 2ahf_A 306 FIDAAKTTVTA 316 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887754
No 18
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.13 E-value=0.027 Score=61.20 Aligned_cols=145 Identities=13% Similarity=-0.001 Sum_probs=85.8
Q ss_pred ccchhHHHHHHHHHcCCHHHHHHHhhcccCCcch-------hhhhcCCCCC-------cccccccc-ceeehhhhHHHHh
Q 007406 33 TGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLG-------LLAVQADDIS-------GFHANTHI-PVVIGSQMRYEVT 97 (605)
Q Consensus 33 ~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~-------~l~~~~D~l~-------g~Hanthi-P~~~G~a~~Y~~T 97 (605)
.|-|..+|.++|+.|||++|++.|+...+ |.. .+....-.+. ..+.-... .++.++...|+.|
T Consensus 84 ~Gv~l~gl~~ay~~Tgd~kY~~ya~~~~d--fi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T 161 (445)
T 3k11_A 84 WGVTYSALIAAAETTGDKRYTDYVQNRFR--FLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDDAGAVCTAMIKLRLKD 161 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHhccchhhhhhhccCCeecccccccCCCcchhHHHHHHHHHHHHHhc
Confidence 47889999999999999999999997543 111 1111111110 01111111 1234567889999
Q ss_pred CCchHHHHHHHHHHHhhccCe-EeecCCCCCCCCCCCccccccCCCCccccchh--hHHHHHHHHHHhccCCCc--hHHH
Q 007406 98 GDPLYKVTGTFFMDIVNASHG-YATGGTSAGEFWSDPKRLASTLGTENEESCTT--YNMLKVSRHLFRWTKEMV--YADY 172 (605)
Q Consensus 98 Gd~~y~~aa~~fw~~v~~~h~-y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas--~nmlkl~~~Lf~~tgD~~--YaD~ 172 (605)
+|+.|++++..+++.+..+.- -..||+-- .+ ...+.-=|.. .++. +.-++.+.++|++ |.|.
T Consensus 162 ~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h-----~~-------~~~~q~WiD~lyM~~p-fla~~~~~tgd~~~~y~d~ 228 (445)
T 3k11_A 162 ESLPVDGLIQNYFDFIINKEYRLADGTFAR-----NR-------PQRNTLWLDDMFMGIP-AVAQMSRYDKEAKNKYLAE 228 (445)
T ss_dssp TTCCCHHHHHHHHHHHHHTSCBCTTCCBCB-----CS-------SSTTEEETHHHHHHHH-HHHHHHHHCGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCceee-----cC-------CCCCceEecchhhHHH-HHHHHHHHHCCcchHHHHH
Confidence 999999999999999875321 23355442 10 0111111222 2333 4555688899999 9998
Q ss_pred HHHHHhcccccccCCCCCCcE
Q 007406 173 YERALTNGVLSIQRGTEPGVM 193 (605)
Q Consensus 173 ~ERalyN~ila~q~~~~~g~~ 193 (605)
+.+-+-...--..++ +.|.+
T Consensus 229 A~~q~~~~~~~l~D~-~tGL~ 248 (445)
T 3k11_A 229 AVKQFLQFADRMFIP-EKGLY 248 (445)
T ss_dssp HHHHHHHHHHHHEET-TTTEE
T ss_pred HHHHHHHHHHhcccC-CCCCE
Confidence 888665544333444 44544
No 19
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=94.69 E-value=0.048 Score=58.38 Aligned_cols=125 Identities=14% Similarity=0.045 Sum_probs=75.7
Q ss_pred hhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCcccc-ccccc-----------eeehhhhHHHHhCC---c
Q 007406 36 MNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHA-NTHIP-----------VVIGSQMRYEVTGD---P 100 (605)
Q Consensus 36 mne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~Ha-nthiP-----------~~~G~a~~Y~~TGd---~ 100 (605)
+..++..||+.|||++||++|+.+.+- +...+ ..|..+-.+. ..++| .+.|+.++++.|++ +
T Consensus 251 ~i~gl~~lY~~T~d~~yL~~A~~la~~-~l~~~--~~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~ 327 (397)
T 2zzr_A 251 GIYGIPLSYRKMKDYQQIILFKGMTNY-FLNRL--PEDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPD 327 (397)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHTC--CTTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTT
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHhh--HHhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchh
Confidence 458899999999999999999876320 00000 0111111110 01111 13567888999987 7
Q ss_pred h--HHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCC
Q 007406 101 L--YKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE 166 (605)
Q Consensus 101 ~--y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD 166 (605)
+ |+++|+...+.+.....-..|..+.+.--+.-+..+. ......|..|+--++.+-|.++.++
T Consensus 328 ~~~Y~~~A~~~l~~l~~~y~~~~~~~~~glL~h~~~~~~~---~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 328 KETYKYAMHTMLRSLIEQYSNNELIAGRPLLLHGVYSWHS---GKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHTBCCCCCTTCCSBCCEEEETTT---TEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCCCCceeeeceeeCCC---CCCCCCCcchHHHHHHHHHHHHhcC
Confidence 7 9999999999887542222233333332221112221 3467788889988888888888765
No 20
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=93.83 E-value=0.11 Score=55.17 Aligned_cols=125 Identities=9% Similarity=-0.004 Sum_probs=73.6
Q ss_pred hhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCcccc-------ccccc-----eeehhhhHHHHhC-----
Q 007406 36 MNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHA-------NTHIP-----VVIGSQMRYEVTG----- 98 (605)
Q Consensus 36 mne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~Ha-------nthiP-----~~~G~a~~Y~~TG----- 98 (605)
+..++..||+.|+|++||+.|+.+.+- ++..+ ..|...-.+. .-..| .+.|+.++++.++
T Consensus 226 ~i~gl~~ly~~T~d~~yL~~A~~la~~-~l~~~--~~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~ 302 (377)
T 2ahf_A 226 GIYGFALNSRYLGNADLLETAKRMARH-FLARV--PEDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPE 302 (377)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTC--CTTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHH
T ss_pred HHHHHHHHHHHHCChHHHHHHHHHHHH-HHHhh--HHhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccc
Confidence 458899999999999999999886320 00000 0111100110 01122 1356778899996
Q ss_pred CchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCC
Q 007406 99 DPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE 166 (605)
Q Consensus 99 d~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD 166 (605)
++.|+++|+...+.+.+...-..|..+.+..-+.-+..+. ......|..|+--++.+-|.++.++
T Consensus 303 ~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 303 RQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHTBCCCCSSCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHcC
Confidence 6789999999999887533222233333333222222221 2346678888888888888877654
No 21
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=93.37 E-value=0.097 Score=55.98 Aligned_cols=124 Identities=14% Similarity=0.091 Sum_probs=75.0
Q ss_pred hhHHHHHHHHHcCCHHHHHHHhhcc---cCCcchhhhhcCCCCCccc--------------cccccceeehhhhHHHHhC
Q 007406 36 MNDVLYRLYTITQDPKHLLLAHLFD---KPCFLGLLAVQADDISGFH--------------ANTHIPVVIGSQMRYEVTG 98 (605)
Q Consensus 36 mne~L~~LY~~TGd~~yL~lA~~F~---~~~~~~~l~~~~D~l~g~H--------------anthiP~~~G~a~~Y~~TG 98 (605)
|.-++++.|. ||+++|+++|+.-. ...+.+... .|+| ...+.=++.+++. |++||
T Consensus 56 ~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~------GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg 127 (421)
T 2zbl_A 56 MLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKY------GGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTG 127 (421)
T ss_dssp HHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTT------SSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTT
T ss_pred HHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCC------CeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhC
Confidence 4578999998 99999999998742 122222110 1221 1111112346777 99999
Q ss_pred CchHHHHHHHHHHHhhccCeEe--ecCCCCC--CCCCCCccccccCCCCccccchhhHH--HHHHHHHHhccCCCchHHH
Q 007406 99 DPLYKVTGTFFMDIVNASHGYA--TGGTSAG--EFWSDPKRLASTLGTENEESCTTYNM--LKVSRHLFRWTKEMVYADY 172 (605)
Q Consensus 99 d~~y~~aa~~fw~~v~~~h~y~--TGG~g~~--E~f~~p~~L~~~l~~~~~EtCas~nm--lkl~~~Lf~~tgD~~YaD~ 172 (605)
++.|++.++...+.+.+ |+.- .||.-.. ..+.. +.+ . ..-.-+| +.-.-+|++.++|.+|.+.
T Consensus 128 ~~~~l~~a~~~~~~l~~-~~~d~~~Ggf~~~~d~d~~~---~~~-----~--~~~n~~m~~~~al~~l~~~tgd~~~~~~ 196 (421)
T 2zbl_A 128 HPEARKLLDYTIEVIEK-YFWSEEEQMCLESWDEAFSQ---TED-----Y--RGGNANMHAVEAFLIVYDVTHDKKWLDR 196 (421)
T ss_dssp CTTHHHHHHHHHHHHHH-HTEETTTTEECCEECTTSCS---BCS-----C--EEHHHHHHHHHHHHHHHHTTCCTHHHHH
T ss_pred CccHHHHHHHHHHHHHH-HhccCCCCCeeeeecCCCCc---ccc-----c--CCCcHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 99999999999998875 5554 3543211 11110 101 1 1112233 4455578999999999999
Q ss_pred HHHHHh
Q 007406 173 YERALT 178 (605)
Q Consensus 173 ~ERaly 178 (605)
.++++=
T Consensus 197 A~~~~~ 202 (421)
T 2zbl_A 197 ALRIAS 202 (421)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887763
No 22
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=93.25 E-value=0.15 Score=53.67 Aligned_cols=128 Identities=14% Similarity=0.153 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCHHHHHHHhhccc---CCcchhhhhcCCCCCcccccccc-------------c---------eeehhhh
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDK---PCFLGLLAVQADDISGFHANTHI-------------P---------VVIGSQM 92 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~---~~~~~~l~~~~D~l~g~Hanthi-------------P---------~~~G~a~ 92 (605)
..|++||++|||++|++.|.+-.+ ..++++ .+.| -.|..++- | .+.|.++
T Consensus 150 p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~----~tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~ 224 (373)
T 1nc5_A 150 PFALKYANLKQETELFDQVVLQESLMRKHTKDA----KTGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLAD 224 (373)
T ss_dssp HHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT----TTSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC----CCCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHH
Confidence 778999999999999999976311 111111 1111 11322211 2 1355777
Q ss_pred HHHH-----hCCchHHHHHHHHHHHhhccCeEe-ecCCCCCCCCCCCcccc-ccCCCCccc----cchhhHHHHHHHHHH
Q 007406 93 RYEV-----TGDPLYKVTGTFFMDIVNASHGYA-TGGTSAGEFWSDPKRLA-STLGTENEE----SCTTYNMLKVSRHLF 161 (605)
Q Consensus 93 ~Y~~-----TGd~~y~~aa~~fw~~v~~~h~y~-TGG~g~~E~f~~p~~L~-~~l~~~~~E----tCas~nmlkl~~~Lf 161 (605)
.|+. ++++.|++.+++.-+.+.++.. . +| .|.. .+- ...+.++-| .+.+|.|++..+.-+
T Consensus 225 ~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~-~~dG------~W~~--~ld~~~~~~~~~EsSatA~~ay~l~~g~~~g~ 295 (373)
T 1nc5_A 225 MIEELPKKHPNRHVWKNTLQDMIKSICRYQD-KETG------LWYQ--IVDKGDRSDNWLESSGSCLYMYAIAKGINKGY 295 (373)
T ss_dssp HGGGSCTTCHHHHHHHHHHHHHHHHHHTTSC-TTTS------CCBS--BTTCTTSTTCCBCHHHHHHHHHHHHHHHHHTS
T ss_pred HHHhCCccchhHHHHHHHHHHHHHHHHHhcC-CCCC------ceee--ecCCCCCCCCCccccHHHHHHHHHHHHHHCCC
Confidence 8887 6788999999998888876542 2 33 2321 010 111244566 344478887775533
Q ss_pred hccCCCchHHHHHHHHhccccc
Q 007406 162 RWTKEMVYADYYERALTNGVLS 183 (605)
Q Consensus 162 ~~tgD~~YaD~~ERalyN~ila 183 (605)
. |.+|.+..||++ ++++.
T Consensus 296 l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 296 L---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp S---CGGGHHHHHHHH-HHHHH
T ss_pred C---cHHHHHHHHHHH-HHHHH
Confidence 2 468999999987 66655
No 23
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=91.89 E-value=0.13 Score=54.14 Aligned_cols=74 Identities=19% Similarity=0.044 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCC-Cc-ccc---ccccc---------------eeehhhhHHHHhC
Q 007406 39 VLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDI-SG-FHA---NTHIP---------------VVIGSQMRYEVTG 98 (605)
Q Consensus 39 ~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l-~g-~Ha---nthiP---------------~~~G~a~~Y~~TG 98 (605)
.|.++++++||++|++.|+..-+.. .+..+-|.- .+ .|. ..+.+ .+.|++.+|++||
T Consensus 255 lL~~a~~~~~~~~~l~~A~~~~~~~---~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tg 331 (402)
T 1fp3_A 255 FLLRHSSRSGDAKLRAHVIDTFLLL---PFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESG 331 (402)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTHH---HHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHH---HHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999997753311 011111110 01 111 11111 1578999999999
Q ss_pred CchHHHHHHHHHHHhhc
Q 007406 99 DPLYKVTGTFFMDIVNA 115 (605)
Q Consensus 99 d~~y~~aa~~fw~~v~~ 115 (605)
|+.|++.++..|+.+..
T Consensus 332 d~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 332 DPALLRLFYQVAEYTFR 348 (402)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999999864
No 24
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=90.56 E-value=0.24 Score=52.54 Aligned_cols=129 Identities=19% Similarity=0.211 Sum_probs=77.1
Q ss_pred hh-HHHHHHHHHcCCHHHHHHHhh-ccc--CCcchhhhhcCCCCCc--cccccccc------e---------eehhhhHH
Q 007406 36 MN-DVLYRLYTITQDPKHLLLAHL-FDK--PCFLGLLAVQADDISG--FHANTHIP------V---------VIGSQMRY 94 (605)
Q Consensus 36 mn-e~L~~LY~~TGd~~yL~lA~~-F~~--~~~~~~l~~~~D~l~g--~HanthiP------~---------~~G~a~~Y 94 (605)
|+ ..|+++|++|||++|++.|.+ |+. ..++ |.-.| .|..++.. . +.|.++.|
T Consensus 174 M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~-------D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l 246 (382)
T 3pmm_A 174 MTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLM-------DRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFL 246 (382)
T ss_dssp HTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHB-------CTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHcc-------CCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHH
Confidence 55 678999999999999998843 321 1122 11122 24333222 2 35688888
Q ss_pred HH-------hCCchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchh----hHHHHHHHHHHhc
Q 007406 95 EV-------TGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTT----YNMLKVSRHLFRW 163 (605)
Q Consensus 95 ~~-------TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas----~nmlkl~~~Lf~~ 163 (605)
+. ++++.|++..+..-+.+.++.- .+| .|.. +.+ -+..+-||-+| |.|++..+.=+
T Consensus 247 ~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~-~~G------~W~~---~~d-~~~~y~EsSatA~~ay~ll~~~~~g~-- 313 (382)
T 3pmm_A 247 ELVDLPEGNAVRRYLITVLDAQIAALAECQD-DSG------LWHT---LLD-DPHSYLEASATAGFAYGILKAVRKRY-- 313 (382)
T ss_dssp HHHCCCTTCHHHHHHHHHHHHHHHHHHHHCC-TTS------CEES---BTT-CTTSCEEHHHHHHHHHHHHHHHHTTS--
T ss_pred HhhcCCcchhhHHHHHHHHHHHHHHHHHcCC-CCC------Chhh---ccC-CCCCCccccHHHHHHHHHHHHHHcCC--
Confidence 87 5566777777777777765442 333 3432 111 12356665444 77887766322
Q ss_pred cCCCchHHHHHHHHhcccccccC
Q 007406 164 TKEMVYADYYERALTNGVLSIQR 186 (605)
Q Consensus 164 tgD~~YaD~~ERalyN~ila~q~ 186 (605)
- +.+|.+..||+ +++++...+
T Consensus 314 l-~~~Y~~~a~ka-~~~l~~~i~ 334 (382)
T 3pmm_A 314 V-GQHYAGVAEKA-IRGIVQNIS 334 (382)
T ss_dssp S-CGGGHHHHHHH-HHHHHHTBC
T ss_pred C-cHHHHHHHHHH-HHHHHhhCC
Confidence 1 46899999994 567776654
No 25
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=87.40 E-value=1.6 Score=48.79 Aligned_cols=162 Identities=14% Similarity=0.055 Sum_probs=82.8
Q ss_pred hcccchhHHHHHHHHHcCCHHHHHHHhhccc-----------CCcchhhhhcCCCC-CccccccccceeehhhhHHHHhC
Q 007406 31 EETGGMNDVLYRLYTITQDPKHLLLAHLFDK-----------PCFLGLLAVQADDI-SGFHANTHIPVVIGSQMRYEVTG 98 (605)
Q Consensus 31 ~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~-----------~~~~~~l~~~~D~l-~g~HanthiP~~~G~a~~Y~~TG 98 (605)
-|+ .|..+.+|||+.|||++||+.|..+.+ ..++|.-. .|.- +..|+...---++.+++..++++
T Consensus 304 De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~--d~~~r~~~d~a~~gl~~iaLl~l~~~~~ 380 (586)
T 3h7l_A 304 DEY-CALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSAN--QDGSRPYFHAAEAGLPTIALCEYLAIED 380 (586)
T ss_dssp HHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSS--SSSSSBCCCTTTTTHHHHHHHHHHHHCC
T ss_pred hHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCc--ccCCcccccccccHHHHHHHHHhhhhcC
Confidence 444 456789999999999999999987421 12333211 1111 11232221112344566778999
Q ss_pred CchHHHHHH----HHHH---Hhhcc--------CeEeecCCC-CCCCCCCCccccccCCCCc-cccchhhHHHHHHHHHH
Q 007406 99 DPLYKVTGT----FFMD---IVNAS--------HGYATGGTS-AGEFWSDPKRLASTLGTEN-EESCTTYNMLKVSRHLF 161 (605)
Q Consensus 99 d~~y~~aa~----~fw~---~v~~~--------h~y~TGG~g-~~E~f~~p~~L~~~l~~~~-~EtCas~nmlkl~~~Lf 161 (605)
|+.+++.++ ...+ .++++ +.|+.+..+ ....|.-|..... ...- .+.=...|...++...+
T Consensus 381 d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~--~y~WqGsN~~~an~a~~~~~a~ 458 (586)
T 3h7l_A 381 DSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNES--GYWWQGENARLGSLATMAYLAQ 458 (586)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTT--SSCCCCCHHHHHHHHHHHHHSG
T ss_pred ChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCC--CCeeeChHHHHHHHHHHHHHHH
Confidence 874444333 3333 12211 145543222 2233433322100 0112 33334456666777777
Q ss_pred hccCC----CchHHHHHHHHhcccccccCCCCCCcEEEeccCCCC
Q 007406 162 RWTKE----MVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGRG 202 (605)
Q Consensus 162 ~~tgD----~~YaD~~ERalyN~ila~q~~~~~g~~~Y~~pL~~g 202 (605)
.+++| .+|.|.....+ |=|||. +| -.+.|++..+..
T Consensus 459 ~~~~~~~~~~~y~~~a~~ql-dyiLG~-Np---~~~s~v~G~G~~ 498 (586)
T 3h7l_A 459 PHIASQEIQQQLSVFAQDAL-NWIVGL-NP---YDMCMLDGHGRN 498 (586)
T ss_dssp GGCCCHHHHHHHHHHHHHHH-HHHBTC-ST---TCCBCBTTSSSC
T ss_pred HhcCCchhHHHHHHHHHHhh-hhhccC-CC---CCCccEEeeCCC
Confidence 88998 67777766543 556665 33 245666555543
No 26
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=85.90 E-value=0.68 Score=48.66 Aligned_cols=106 Identities=7% Similarity=-0.105 Sum_probs=64.6
Q ss_pred hhhHHHHhCCchHHHHHHHHHHHh-hccCeEe-e-cCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCC
Q 007406 90 SQMRYEVTGDPLYKVTGTFFMDIV-NASHGYA-T-GGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE 166 (605)
Q Consensus 90 ~a~~Y~~TGd~~y~~aa~~fw~~v-~~~h~y~-T-GG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD 166 (605)
.+..++++||+.|+++|+...+.+ .+ +++- - ||.--.-.+. ......+.......+...+++.-.-.|++.|+|
T Consensus 256 L~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~d~~~gg~~~~~~~~--g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd 332 (402)
T 1fp3_A 256 LLRHSSRSGDAKLRAHVIDTFLLLPFR-SGWDADHGGLFYFQDAD--GLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGD 332 (402)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTHHHHH-HHBCTTTCSBCSCEETT--SCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHH-HhccCCCCCEEEeecCC--CCccccCcCCCcCcHHHHHHHHHHHHHHHHhCC
Confidence 344588999999999999988888 64 4442 2 5443211110 111112223444556777788888899999999
Q ss_pred CchHHHHHHHHhccccccc-CCCCCCcEEEeccC
Q 007406 167 MVYADYYERALTNGVLSIQ-RGTEPGVMIYMLPL 199 (605)
Q Consensus 167 ~~YaD~~ERalyN~ila~q-~~~~~g~~~Y~~pL 199 (605)
.+|.+.+++. .+-+.... ++..++.|.+..+-
T Consensus 333 ~~yl~~a~~~-~~~~~~~f~D~~~G~w~~~~~~~ 365 (402)
T 1fp3_A 333 PALLRLFYQV-AEYTFRQFRDPEYGEWFGYLNRE 365 (402)
T ss_dssp HHHHHHHHHH-HHHHHHHTBCTTTSSBCCEECTT
T ss_pred HHHHHHHHHH-HHHHHHhCcCCCCCceEeeECCC
Confidence 9999988874 44444432 33233444555443
No 27
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=79.30 E-value=27 Score=32.03 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=56.2
Q ss_pred ceEEEeccCCceeeeecCCC--CCcccccEEEEEEecCCCCccccccccCCCceeeeccCCCCCceEEEecCceeEEEeC
Q 007406 418 SAFVLSNSNQSITMEKFPES--GTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSD 495 (605)
Q Consensus 418 ~~f~~~~~~~~~~~~~~p~~--g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~ 495 (605)
..|..+..+|.+++.+ |.. +....-.-+|.+..- .++.|.|.... |.|++-.. +-.|. .+
T Consensus 34 ~~y~~A~~~G~~t~~~-~~~~~~~~~~~~E~f~l~~~-------------~~~~v~LRs~~--GkYLs~~~-~G~v~-a~ 95 (155)
T 2yug_A 34 GAYIHALDNGLFTLGA-PHREVDEGPSPPEQFTAVKL-------------SDSRIALKSGY--GKYLGINS-DGLVV-GR 95 (155)
T ss_dssp SCBEEECTTSCEEECC-CCSSSSCCCCTTTCEEEEEC-------------SSSCEEEEETT--SCBEEECS-SSBEE-EC
T ss_pred CCEEEEEcCCcEEEcc-ccccccCCCCCcceEEEEEC-------------CCCEEEEEeCC--CCEEEecC-CCcEE-ec
Confidence 3566666667665532 322 344455668887642 11235555433 78887643 22333 34
Q ss_pred CCCCCCCceEEEeecCCCCCCeeEEEeccCCCeEEEec
Q 007406 496 SPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSG 533 (605)
Q Consensus 496 ~~~~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~ 533 (605)
..+-++..+|.+++- + |.+.|.+. -|+||.+.
T Consensus 96 a~~~g~~E~F~l~~~-~---G~~aLra~--nG~yl~~~ 127 (155)
T 2yug_A 96 SDAIGPREQWEPVFQ-D---GKMALLAS--NSCFIRCN 127 (155)
T ss_dssp CSSCCTTTBEEEECS-T---TCCEEEET--TSCBEEEC
T ss_pred cCCCCCCCEEEEEEE-C---CEEEEEeC--CCCEEEEc
Confidence 455578899999986 3 57999993 59999975
No 28
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=74.01 E-value=13 Score=39.91 Aligned_cols=140 Identities=15% Similarity=0.086 Sum_probs=74.6
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCC-CCCccccccccceeehhhh-HHHHhCCchHHHHHHHHHHHhhc
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQAD-DISGFHANTHIPVVIGSQM-RYEVTGDPLYKVTGTFFMDIVNA 115 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D-~l~g~HanthiP~~~G~a~-~Y~~TGd~~y~~aa~~fw~~v~~ 115 (605)
.+-+|||+.|||++||+.|+.+..... .. ...+ .....|.-. .+..|+.. +.++++++.|++.++.+.+....
T Consensus 215 WAAa~Ly~aTgd~~Yl~~a~~~~~~~~--~~-~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ 289 (441)
T 1ia6_A 215 WAATWLYTATNDSTYITDAEQFITLGN--TM-NENKMQDKWTMCWD--DMYVPAALRLAQITGKQIYKDAIEFNFNYWKT 289 (441)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHTTC---------CGGGCSSCSSSS--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhhhh--hc-ccccccCCCcCCcc--chHHHHHHHHHhccCcHHHHHHHHHHHHHHHh
Confidence 566799999999999999987643210 00 0000 000001000 01234333 46678999999988887766542
Q ss_pred cCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHHhcccccccCCCCCCcEEE
Q 007406 116 SHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIY 195 (605)
Q Consensus 116 ~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~ila~q~~~~~g~~~Y 195 (605)
.-.+--||..-.-.| ...=-+.|+.+++..-..++++.+|.+...+ -.|=|||. +|. .+.|
T Consensus 290 ~~~~tp~Gl~~~~~W--------------Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~-qldYiLG~-NP~---~~Sy 350 (441)
T 1ia6_A 290 QVTTTPGGLKWLSNW--------------GVLRYAAAESMVMLVYCKQNPDQSLLDLAKK-QVDYILGD-NPA---NMSY 350 (441)
T ss_dssp TSCBCTTSCBCCCST--------------THHHHHHHHHHHHHHHHHHSCCHHHHHHHHH-HHHHHHTC-STT---CCCS
T ss_pred hcccCCCCceecCCc--------------chHHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHhcCC-CCC---Ccee
Confidence 111222443311111 1111123444555555567788899988865 45778885 342 3566
Q ss_pred eccCCC
Q 007406 196 MLPLGR 201 (605)
Q Consensus 196 ~~pL~~ 201 (605)
+.-.+.
T Consensus 351 vvG~G~ 356 (441)
T 1ia6_A 351 IIGYGS 356 (441)
T ss_dssp BTTSSS
T ss_pred EEecCC
Confidence 665543
No 29
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=69.03 E-value=7.5 Score=42.44 Aligned_cols=150 Identities=13% Similarity=0.068 Sum_probs=82.8
Q ss_pred hhcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCC--------Cccccccccceeeh---------hhh
Q 007406 30 NEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDI--------SGFHANTHIPVVIG---------SQM 92 (605)
Q Consensus 30 ~~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l--------~g~HanthiP~~~G---------~a~ 92 (605)
..|.|-+..-+.+|.++|||++|.+.|++..+ .++... ..+.| .|...+.++ -+| +..
T Consensus 172 lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~--~l~~~~-~~~GL~p~~i~~~tg~~~~~~~--~~Ga~~DS~YEYLlK 246 (478)
T 1nxc_A 172 LAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRT--VLNKLD-KPEGLYPNYLNPSSGQWGQHHV--SVGGLGDSFYEYLLK 246 (478)
T ss_dssp HHHHTTCHHHHHHHHHHHCCTHHHHHHHHHHH--HHHHSC-CGGGCCCSEECTTTCCBCSCEE--CSSTTTHHHHHHHHH
T ss_pred cccccchhhhHHHHHHHHCChHHHHHHHHHHH--HHHhcC-CCCCccccccCCCCCCccCcee--eecCCCchHHHHHHH
Confidence 35678888889999999999999999998743 111110 01111 111111121 233 345
Q ss_pred HHHHhC--CchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchH
Q 007406 93 RYEVTG--DPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYA 170 (605)
Q Consensus 93 ~Y~~TG--d~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~Ya 170 (605)
.|.++| |+.|++.-...++-|.+ |+.-.. . .+-.|-....-....+....=+|=.-+|+-|.-.++......+|+
T Consensus 247 ~~il~g~~d~~~~~m~~~a~~~i~~-~l~~~~-~-~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l 323 (478)
T 1nxc_A 247 AWLMSDKTDLEAKKMYFDAVQAIET-HLIRKS-S-GGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYL 323 (478)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHH-HTEEEC-T-TSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHH
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHH-HhcccC-C-CCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHH
Confidence 677787 67888888888888764 443210 0 010110000000001234556898888888877666544445677
Q ss_pred HHHHHH------HhcccccccCC
Q 007406 171 DYYERA------LTNGVLSIQRG 187 (605)
Q Consensus 171 D~~ERa------lyN~ila~q~~ 187 (605)
+..++. .|+....+..|
T Consensus 324 ~~a~~l~~tC~~~y~~~~tgl~P 346 (478)
T 1nxc_A 324 ELGAEIARTCHESYNRTYVKLGP 346 (478)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCC
Confidence 666543 46655555444
No 30
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=68.16 E-value=11 Score=40.44 Aligned_cols=134 Identities=16% Similarity=0.099 Sum_probs=73.7
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccceeehh-hhHHHHhCCchHHHHHHHHHHHhhcc
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGS-QMRYEVTGDPLYKVTGTFFMDIVNAS 116 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~~~G~-a~~Y~~TGd~~y~~aa~~fw~~v~~~ 116 (605)
.+-+|||+.|||++||+.|+.+... + .. ......+. ..+ +..|. +.+.++++++.|++.++.|.+.+...
T Consensus 217 WAAa~Ly~aTgd~~Yl~~~~~~~~~-~-~~-~~~~~~~~--Wd~----~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~ 287 (433)
T 1ks8_A 217 WAAAWLYRATNDNTYLNTAESLYDE-F-GL-QNWGGGLN--WDS----KVSGVQVLLAKLTNKQAYKDTVQSYVNYLINN 287 (433)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHH-T-TG-GGSCCCCC--SSC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHh-c-Cc-CcCcCCcC--ccc----hhhHHHHHHhhccChHHHHHHHHHHHHHHHhc
Confidence 5667999999999999999875321 1 00 00000000 111 12333 33457789999999999998887642
Q ss_pred CeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhc-cCCCchHHHHHHHHhcccccccCCCCCCcEEE
Q 007406 117 HGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRW-TKEMVYADYYERALTNGVLSIQRGTEPGVMIY 195 (605)
Q Consensus 117 h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~-tgD~~YaD~~ERalyN~ila~q~~~~~g~~~Y 195 (605)
-.+--||..-. ..-...=-+.|+.+++-....+ +++.+|.+...+. .|=|||. ++ ..|
T Consensus 288 ~~~tp~Gl~~~--------------~~WGs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~q-ldYiLG~-n~-----~Sy 346 (433)
T 1ks8_A 288 QQKTPKGLLYI--------------DMWGTLRHAANAAFIMLEAAELGLSASSYRQFAQTQ-IDYALGD-GG-----RSF 346 (433)
T ss_dssp SCBCTTSCBCC--------------CSTTHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHH-HHHHHTT-TS-----SCC
T ss_pred CCcCCCCceee--------------cCCchhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHh-HhhccCC-CC-----cce
Confidence 21111222111 1111111123444444455556 7888898888654 5778886 22 366
Q ss_pred eccCCC
Q 007406 196 MLPLGR 201 (605)
Q Consensus 196 ~~pL~~ 201 (605)
+.-.+.
T Consensus 347 vvG~G~ 352 (433)
T 1ks8_A 347 VCGFGS 352 (433)
T ss_dssp BTTSSS
T ss_pred EeccCC
Confidence 665554
No 31
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=68.14 E-value=6.5 Score=41.76 Aligned_cols=120 Identities=15% Similarity=0.010 Sum_probs=73.4
Q ss_pred chhHHHHHHHHHcCCHHHHHHHhhccc----CCc---chhhhh--cCCCCCccccccccc--eeehhhhHHHHhCCchHH
Q 007406 35 GMNDVLYRLYTITQDPKHLLLAHLFDK----PCF---LGLLAV--QADDISGFHANTHIP--VVIGSQMRYEVTGDPLYK 103 (605)
Q Consensus 35 Gmne~L~~LY~~TGd~~yL~lA~~F~~----~~~---~~~l~~--~~D~l~g~HanthiP--~~~G~a~~Y~~TGd~~y~ 103 (605)
|+--+|.++|+.|++++++++++...+ ..+ .|+... ..+.+ .+-=|-. ++......+++++|+.|+
T Consensus 235 GI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~---~~wChG~~Gi~~~l~~~~~~~~~~~~~ 311 (411)
T 3e6u_A 235 GIYYYLMQPSLQVSQGKLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLL---VHWCHGAPGVIYMLIQAYKVFREEKYL 311 (411)
T ss_dssp HHHHHHTCGGGCCCHHHHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCC---CSSSSSHHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHHHHHhhccCCCCCCCCCcccCcc---ccccCCcHHHHHHHHHHHHHcCCHHHH
Confidence 566889999999999999988776421 110 111100 00000 0000111 112244567899999999
Q ss_pred HHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHHh
Q 007406 104 VTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALT 178 (605)
Q Consensus 104 ~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERaly 178 (605)
+.+....+.+.+. | . + ....+=.|..-+...+..+|++.|+|++|.+..++.+-
T Consensus 312 ~~a~~~~~~~~~~-----g-~-----------~----~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 312 CDAYQCADVIWQY-----G-L-----------L----KKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHHHHH-----C-S-----------B----TTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----C-c-----------c----CCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9888777766542 1 0 0 01223345567777888899999999999999888663
No 32
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=62.07 E-value=28 Score=39.08 Aligned_cols=72 Identities=21% Similarity=0.131 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCC--CCCccccccccceeehhhhH-HHHhCCchHHHHHHHHHHHhh
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQAD--DISGFHANTHIPVVIGSQMR-YEVTGDPLYKVTGTFFMDIVN 114 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D--~l~g~HanthiP~~~G~a~~-Y~~TGd~~y~~aa~~fw~~v~ 114 (605)
.+-+|||+.|||++||+.|+.+... +.. ..+.. ...+.+.-.. +..|+..+ .++++++.|++.++.+.+...
T Consensus 216 WAAawLy~ATgd~~Yl~~a~~~~~~-~~~--~~~~~~~~~~~~~~Wd~--~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 216 WAAVWLYLATNDSTYLDKAESYVPN-WGK--EQQTDIIAYKWGQCWDD--VHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHTGGG-SCB--CTTSSSBCCSSCCBTTB--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHh-hcc--ccccccccccCCcCccc--hHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 5667999999999999999875422 100 00000 0000111011 23455543 778999999999999887654
No 33
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=61.15 E-value=4.8 Score=43.56 Aligned_cols=101 Identities=10% Similarity=-0.000 Sum_probs=58.1
Q ss_pred cceeehhhhHHHHhCCchHHHHHHHHHHHhhccCe----E--eecCCCCCCCCCCCccccccCCCCccccchhhHHHHHH
Q 007406 84 IPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHG----Y--ATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVS 157 (605)
Q Consensus 84 iP~~~G~a~~Y~~TGd~~y~~aa~~fw~~v~~~h~----y--~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~ 157 (605)
...+.|+++.|++|||++|++.++.+.+.+.+..- + -.|..... |.. . ....+-+-|+...+..+
T Consensus 85 Gv~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~--~r~---~---~~~~~LDD~g~~~~~Li- 155 (445)
T 3k11_A 85 GVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ--LLQ---I---LTPHALDDAGAVCTAMI- 155 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH--HHH---H---HSCCSGGGTHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecc--ccc---c---cCCCcchhHHHHHHHHH-
Confidence 34567899999999999999999999887653110 0 12322110 000 0 01123333554433333
Q ss_pred HHHHhccCCCchHHHHHHHHhcccccccCCCCCCcEEE
Q 007406 158 RHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIY 195 (605)
Q Consensus 158 ~~Lf~~tgD~~YaD~~ERalyN~ila~q~~~~~g~~~Y 195 (605)
.+++.|+|.+|.+.++.. .+.++..+..+..|.|.+
T Consensus 156 -~lY~~T~d~~yl~~a~~~-ad~L~~~~pRt~~Ggf~h 191 (445)
T 3k11_A 156 -KLRLKDESLPVDGLIQNY-FDFIINKEYRLADGTFAR 191 (445)
T ss_dssp -HHHHHCTTCCCHHHHHHH-HHHHHHTSCBCTTCCBCB
T ss_pred -HHHHhcCCHHHHHHHHHH-HHHHHHcCCCCCCCceee
Confidence 788899999999999654 334444442223345543
No 34
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=59.84 E-value=67 Score=34.73 Aligned_cols=72 Identities=18% Similarity=0.073 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCC--CCccccccccceeehhhh-HHHHhCCc-hHHHHHHHHHHHh
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADD--ISGFHANTHIPVVIGSQM-RYEVTGDP-LYKVTGTFFMDIV 113 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~--l~g~HanthiP~~~G~a~-~Y~~TGd~-~y~~aa~~fw~~v 113 (605)
.+-+|||+.|||++||+.|+.+... +.. ..+... ..+.+.-. .+..|+.. +.++++++ .|++.++.+.+..
T Consensus 238 WAAawLy~ATgd~~Yl~~a~~~~~~-~~~--~~~~~~~~~~~~~~Wd--~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 312 (466)
T 2xfg_A 238 WAAVWLYLATNDSSYLDKAESYSDK-WGY--EPQTNIPKYKWAQCWD--DVTYGTYLLLARIKNDNGKYKEAIERHLDWW 312 (466)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHTTTT-SCB--STTSSSBCCSSCCBTT--BCHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH-hcc--ccccccccccCcCCcc--hhHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 5567999999999999999875321 100 000000 00011101 12345544 36778877 8999888887766
Q ss_pred h
Q 007406 114 N 114 (605)
Q Consensus 114 ~ 114 (605)
.
T Consensus 313 ~ 313 (466)
T 2xfg_A 313 T 313 (466)
T ss_dssp T
T ss_pred H
Confidence 5
No 35
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=56.43 E-value=13 Score=41.01 Aligned_cols=27 Identities=11% Similarity=0.024 Sum_probs=21.7
Q ss_pred hhHHHHhCCchHHHHHHHHHHHhhccC
Q 007406 91 QMRYEVTGDPLYKVTGTFFMDIVNASH 117 (605)
Q Consensus 91 a~~Y~~TGd~~y~~aa~~fw~~v~~~h 117 (605)
.++.++|||++|.+++++.++.+.+.+
T Consensus 183 ~~LS~LTGd~~Y~~~a~r~~~~l~~~~ 209 (511)
T 1dl2_A 183 KYLAYLTGNRTYWELVERVYEPLYKNN 209 (511)
T ss_dssp HHHHHHHTCHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHCChHHHHHHHHHHHHHHhcc
Confidence 456799999999999988777776543
No 36
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=53.05 E-value=38 Score=35.23 Aligned_cols=69 Identities=6% Similarity=-0.053 Sum_probs=51.1
Q ss_pred hhhHHHHhCCchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCch
Q 007406 90 SQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVY 169 (605)
Q Consensus 90 ~a~~Y~~TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~Y 169 (605)
....|+.++|+.|++.++...+.+.++ ++. ....+=.|....++.+..+|++.++|++|
T Consensus 288 l~~~~~~~~d~~~~~~a~~~~~~~~~~-----~~~----------------~~~~~LCHG~aG~~~~l~~l~~~~~~~~~ 346 (409)
T 2g0d_A 288 YLYGGLALDNDYFVDKAEKILESAMQR-----KLG----------------IDSYMICHGYSGLIEICSLFKRLLNTKKF 346 (409)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH-----CTT----------------CCSCCTTTSHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh-----ccC----------------CCCCCCCChHHHHHHHHHHHHHHhCCHHH
Confidence 456689999999999999888887754 110 11233345667888889999999999999
Q ss_pred HHHHHHHHhc
Q 007406 170 ADYYERALTN 179 (605)
Q Consensus 170 aD~~ERalyN 179 (605)
.+..++..+.
T Consensus 347 ~~~a~~~~~~ 356 (409)
T 2g0d_A 347 DSYMEEFNVN 356 (409)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHcCCc
Confidence 9998874443
No 37
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=52.92 E-value=13 Score=39.28 Aligned_cols=77 Identities=16% Similarity=0.024 Sum_probs=50.1
Q ss_pred cchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccc--eeehhhhHHHHhCCchHHHHHHHHHH
Q 007406 34 GGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIP--VVIGSQMRYEVTGDPLYKVTGTFFMD 111 (605)
Q Consensus 34 GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP--~~~G~a~~Y~~TGd~~y~~aa~~fw~ 111 (605)
.|+..+|..+++.++|++|++.|...-+. .+. .+ .+...+..=|-- +..-..+.|+.|+|+.|++.|..+.+
T Consensus 292 ~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~--~~~--~g--~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 292 PGVIYMLIQAYKVFREEKYLCDAYQCADV--IWQ--YG--LLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHH--HHH--HC--SBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HHh--cC--ccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 46779999999999999999999875321 111 00 000001111111 11225677999999999999999999
Q ss_pred Hhhcc
Q 007406 112 IVNAS 116 (605)
Q Consensus 112 ~v~~~ 116 (605)
.+.++
T Consensus 366 ~~~~~ 370 (411)
T 3e6u_A 366 WCLEY 370 (411)
T ss_dssp HHTTT
T ss_pred HHHHh
Confidence 88753
No 38
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=50.10 E-value=16 Score=40.23 Aligned_cols=123 Identities=16% Similarity=0.045 Sum_probs=70.1
Q ss_pred hhcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhh---hcCCCCCccccccccc------eeeh---------hh
Q 007406 30 NEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLA---VQADDISGFHANTHIP------VVIG---------SQ 91 (605)
Q Consensus 30 ~~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~---~~~D~l~g~HanthiP------~~~G---------~a 91 (605)
..|.|-+..-+.+|-++|||++|.++|++..+ .++... ...+.|-+.+-+.+-. +-+| +.
T Consensus 172 ~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~--~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLl 249 (511)
T 1dl2_A 172 TAEFTTLQMEFKYLAYLTGNRTYWELVERVYE--PLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLL 249 (511)
T ss_dssp HHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHH--HHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHH
T ss_pred cccccceeeeHHHHHHHHCChHHHHHHHHHHH--HHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHH
Confidence 45778888889999999999999999998743 111111 0112222222111111 1233 45
Q ss_pred hHHHHhCCchHHHHHHHHHHHhhccCeEeecCCCC----CCCCCCCccccccC-CCCccccchhhHHHHHHH
Q 007406 92 MRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSA----GEFWSDPKRLASTL-GTENEESCTTYNMLKVSR 158 (605)
Q Consensus 92 ~~Y~~TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~----~E~f~~p~~L~~~l-~~~~~EtCas~nmlkl~~ 158 (605)
..|.+++|+.|++.=...++-|.+ |+.-.-.... +|.-... .+.+ +....=+|=.-+|+-|..
T Consensus 250 K~~il~~d~~y~~m~~~a~~~i~~-~L~~~~~~~~~~~~~~~~~~~---~g~~~~~~~hL~cF~gG~~aLg~ 317 (511)
T 1dl2_A 250 KQYLLTHETLYYDLYRKSMEGMKK-HLLAQSKPSSLWYIGEREQGL---HGQLSPKMDHLVCFMGGLLASGS 317 (511)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHH-HTEEECTTTCCEEECBBTTCT---TSCCBCEEEGGGGGHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHH-HhccCCCCCCcEEEEEeecCC---CCccccccchhhhchhHHHHhcc
Confidence 667888999999888888888764 4442210000 1111000 0111 234566899888888876
No 39
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=48.21 E-value=1.5e+02 Score=26.58 Aligned_cols=113 Identities=19% Similarity=0.275 Sum_probs=68.3
Q ss_pred CCCceeeeeeccCCceEEEeccCCceeeeecCCCCCcccccEEEEEEecCCCCccccccccCCCceee--eccCCCCCce
Q 007406 404 YNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVM--LEPFDFPGML 481 (605)
Q Consensus 404 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~--lepfd~Pg~~ 481 (605)
||+|-.++.-++|.-...+.. .- +...--...||.......|+..+.- .+|+.+| |.|-- .-.
T Consensus 20 YNDQsitFv~EdgsYeIyveD---------l~--kdqekDkVLlryY~Sq~ps~etgdg--vdg~~LmVnlSP~K--Df~ 84 (161)
T 2kll_A 20 YNDQSITFALEDESYEIYVED---------LK--KDEKKDKVLLSYYESQHPSNESGDG--VDGKMLMVTLSPTK--DFW 84 (161)
T ss_dssp TTTEEEEEEECSSCEEEEEEE---------CC--SCCCCCCEEEEEEECCCCTTTSCCC--CSCCCEEEEEESSS--SEE
T ss_pred ccCceEEEEEeCCcEEEEehh---------hc--cchhcceEEEEeccCCCCccccCCC--ccccEEEEEccccc--cee
Confidence 566666665555544333332 11 4444556778866553333222322 4666666 77765 444
Q ss_pred EEEecCceeEEEeCCCCCCCCceEEEeecCCCCCCeeEEEeccCCCeEEEec
Q 007406 482 VVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSG 533 (605)
Q Consensus 482 v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~ 533 (605)
+--...+..+-+..-.-..+++.|.+.--.. ..+||||-.+.||.|+-+.
T Consensus 85 LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~cVSFEck~~PGvfiGVK 134 (161)
T 2kll_A 85 LHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNCVSFECKTDPGVFIGVK 134 (161)
T ss_dssp EEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSCEEEEESSSTTEEEEES
T ss_pred EecCCccceeEeecccCCCCcceEEEEecCC--CceEEEEecCCCceEEEec
Confidence 4444455666665445557888888875543 4799999999999999764
No 40
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=45.60 E-value=2.2e+02 Score=29.00 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=27.1
Q ss_pred CCCceEEEeecC-CCCCCeeEEEeccCCCeEEEe
Q 007406 500 GDSSVFRLVAGL-DGKDETISLEAVNQNGCFVYS 532 (605)
Q Consensus 500 ~~~s~f~~vpgl-~g~~~~vsles~~~pg~~~~~ 532 (605)
.+.++|++++ + +|.+|+|+|.++ ++|-||+.
T Consensus 92 ~~ctlFkp~~-v~~~~~~~~~f~~v-q~g~~~~~ 123 (303)
T 1jlx_A 92 WACTLFKPLY-VEEGNMKKVRLLHV-QLGHYTQN 123 (303)
T ss_dssp TTCCCEEEEE-SSTTCSSEEEEEET-TTTEECEE
T ss_pred ccccceEEEE-eccCCCceEEEEEE-ecCceEEe
Confidence 4578999998 7 788999999995 99999984
No 41
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=44.68 E-value=1e+02 Score=27.29 Aligned_cols=38 Identities=18% Similarity=0.231 Sum_probs=25.6
Q ss_pred eEEEEEEeCCCCCeeeEEEEeecC-cccCCCcEEEECCeee
Q 007406 282 RMTHTFSSKQEASQSSSLNLRIPL-WTNSNGAKATLNGQSL 321 (605)
Q Consensus 282 ~V~ltv~~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 321 (605)
.|+++|+.+ +....+|.+|.-. +.......|.|||+.+
T Consensus 40 ~v~~~V~v~--~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT--SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES--SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC--CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 566777663 3667888888864 3221258899999765
No 42
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=43.98 E-value=1.1e+02 Score=27.36 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=26.0
Q ss_pred eEEEEEEeCCCCCeeeEEEEeec-CcccCCCcEEEECCeee
Q 007406 282 RMTHTFSSKQEASQSSSLNLRIP-LWTNSNGAKATLNGQSL 321 (605)
Q Consensus 282 ~V~ltv~~~~~~~~~ftL~LRIP-~Wa~~~~~~v~VNG~~~ 321 (605)
.|+++|+.+ +....+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~--~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA--SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES--SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC--CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 577777763 366788888886 33222257999999875
No 43
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=41.78 E-value=26 Score=37.99 Aligned_cols=86 Identities=19% Similarity=0.112 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCcccccccc----c-eeehhhhHHHHhCCchHHHHHHHHHHH
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHI----P-VVIGSQMRYEVTGDPLYKVTGTFFMDI 112 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~Hanthi----P-~~~G~a~~Y~~TGd~~y~~aa~~fw~~ 112 (605)
.++++-|++++|+..++++.-+.+.--++.+-. +.....-.|.+- | .+.++..+|+.|+++.|++.|+..=++
T Consensus 380 l~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~--~~~~~~~~~~~~~~~sp~lL~allEL~~atq~~~~l~lA~~~g~n 457 (543)
T 2v8i_A 380 ISYARAYAIDNDPLLWKVARGIANDQGLGDIGT--APGKEVKVNMDTTNSDPYALFALLDLYHASQVADYRKLAEKIGDN 457 (543)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTT--BTTBSCEECTTCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhCCccccCC--CcCcccccccCCCCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 789999999999999999887754322222211 011001112222 2 346788999999999999999888888
Q ss_pred hhccCeEeecCCCC
Q 007406 113 VNASHGYATGGTSA 126 (605)
Q Consensus 113 v~~~h~y~TGG~g~ 126 (605)
+.+ +.|.-|=+-.
T Consensus 458 l~~-~~~~~G~Fv~ 470 (543)
T 2v8i_A 458 IIK-IRYIDGFFMA 470 (543)
T ss_dssp HHH-HHEETTEECS
T ss_pred HHH-HhhcCceecC
Confidence 875 6666665543
No 44
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=41.41 E-value=36 Score=38.11 Aligned_cols=74 Identities=18% Similarity=0.004 Sum_probs=42.8
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccceeehhhh-HHHHhCCchHHHHHHHHHHHhh
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVVIGSQM-RYEVTGDPLYKVTGTFFMDIVN 114 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~~~G~a~-~Y~~TGd~~y~~aa~~fw~~v~ 114 (605)
.+-+|||+.|||++||+.|+.+...--.... .......+.|.=.. +..|+.. +.++++++.|++.++.+.+...
T Consensus 218 WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~-~~~~~~~~~~~Wd~--~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 218 WGAYWLYKATGDDSYLAKAEYEYDFLSTEQQ-TDLRSYRWTIAWDD--KSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHGGGSCBCTT-SSCBCCSSCCSSSC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcccccc-cccccccccccccc--hHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 5667999999999999999875321000000 00000000111000 2345444 3678999999999999988654
No 45
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=41.07 E-value=29 Score=38.36 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=55.5
Q ss_pred eehhhhHHHHhCCchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchh-hHHHHH-HHHHHhcc
Q 007406 87 VIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTT-YNMLKV-SRHLFRWT 164 (605)
Q Consensus 87 ~~G~a~~Y~~TGd~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas-~nmlkl-~~~Lf~~t 164 (605)
+=|+.-.|.++||+.+++.|...=+.+..---..||---..=.+... .+. ......++|.+ ...|.+ -.+|-++|
T Consensus 175 LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g--~~~-~~~~~~~s~lAe~GSl~LEF~~LS~LT 251 (538)
T 1x9d_A 175 LGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTG--VAH-PPRWTSDSTVAEVTSIQLEFRELSRLT 251 (538)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTC--CEE-CCTTCSEEEHHHHHSSHHHHHHHHHHH
T ss_pred hhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeeccc--ccC-CCCcCCCceeccccceeeeHHHHHHHh
Confidence 34788899999999999999888888754322233322111111100 000 01112346655 222222 24588999
Q ss_pred CCCchHHHHHHHHhccccccc
Q 007406 165 KEMVYADYYERALTNGVLSIQ 185 (605)
Q Consensus 165 gD~~YaD~~ERalyN~ila~q 185 (605)
||++|.|..+|+ ++.+...+
T Consensus 252 Gd~~Y~~~a~r~-~~~l~~~~ 271 (538)
T 1x9d_A 252 GDKKFQEAVEKV-TQHIHGLS 271 (538)
T ss_dssp CCTHHHHHHHHH-HHHHHTCS
T ss_pred CCcHHHHHHHHH-HHHHHhcc
Confidence 999999999987 35555444
No 46
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=40.52 E-value=12 Score=40.99 Aligned_cols=23 Identities=35% Similarity=0.322 Sum_probs=21.0
Q ss_pred hHHHHHHHHHcCCHHHHHHHhhc
Q 007406 37 NDVLYRLYTITQDPKHLLLAHLF 59 (605)
Q Consensus 37 ne~L~~LY~~TGd~~yL~lA~~F 59 (605)
.|+++-||++|||++|++.|-.+
T Consensus 395 iES~fylyR~TgD~~yre~gw~i 417 (503)
T 1hcu_A 395 LESLYYAYRVTGDSKWQDLAWEA 417 (503)
T ss_dssp HHHHHHHHHHHCBHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHH
Confidence 59999999999999999998755
No 47
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=39.82 E-value=74 Score=34.56 Aligned_cols=140 Identities=12% Similarity=0.012 Sum_probs=74.8
Q ss_pred hcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhh----hcCCCCCcccccccc------ceeeh---------hh
Q 007406 31 EETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLA----VQADDISGFHANTHI------PVVIG---------SQ 91 (605)
Q Consensus 31 ~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~----~~~D~l~g~Hanthi------P~~~G---------~a 91 (605)
.|.|-+..-+..|-++|||++|.+.|++..+ .++... ...+.|-+.+-+.+- -+-+| +.
T Consensus 162 Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~--~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLl 239 (475)
T 2ri9_A 162 AVTGTLVLEWTRLSDLTGDEEYAKLSQKAES--YLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLI 239 (475)
T ss_dssp HHHHSCHHHHHHHHHHHSCTHHHHHHHHHHH--HHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHH
T ss_pred hccccceeeHHHHHHHhCCHHHHHHHHHHHH--HHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHH
Confidence 5667777789999999999999999998742 111100 001122122211111 11233 45
Q ss_pred hHHHHhCCc--hHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCch
Q 007406 92 MRYEVTGDP--LYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVY 169 (605)
Q Consensus 92 ~~Y~~TGd~--~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~Y 169 (605)
..|.++|+. .|++.=...++.|.+ |+.-.-....+=.|-....-....+....=+|=.-+|+-|.-.++. ..+|
T Consensus 240 K~~il~g~~~~~~~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~ 315 (475)
T 2ri9_A 240 KMYVYDPKRFETYKDRWVLAAESTIK-HLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDF 315 (475)
T ss_dssp HHHHHCTTTTHHHHHHHHHHHHHHHH-HTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHHHT---CHHH
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccccc---cHHH
Confidence 667888875 677766666666653 4332210000000100000000112345678999999999987764 4566
Q ss_pred HHHHHHH
Q 007406 170 ADYYERA 176 (605)
Q Consensus 170 aD~~ERa 176 (605)
++..++.
T Consensus 316 ~~~a~~l 322 (475)
T 2ri9_A 316 IDFGLEL 322 (475)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
No 48
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=39.81 E-value=76 Score=34.73 Aligned_cols=141 Identities=16% Similarity=0.009 Sum_probs=75.7
Q ss_pred hhcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhh---hcCCCCCccccccccc------eeeh---------hh
Q 007406 30 NEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLA---VQADDISGFHANTHIP------VVIG---------SQ 91 (605)
Q Consensus 30 ~~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~---~~~D~l~g~HanthiP------~~~G---------~a 91 (605)
..|.|-+..-+..|-++|||++|.+.|++..+ .++... ...+.|-+.+-+.+-- +-+| +.
T Consensus 175 ~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~--~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLl 252 (503)
T 1hcu_A 175 VAEIGSLVLEWTRLSDLTGNPQYAQLAQKGES--YLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLI 252 (503)
T ss_dssp HHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHH--HHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHH
T ss_pred cccccceeeehHHHHHHhCChHHHHHHHHHHH--HHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHH
Confidence 35677788889999999999999999998742 111100 0011121112111111 1233 45
Q ss_pred hHHHHhCCc--hHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCch
Q 007406 92 MRYEVTGDP--LYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVY 169 (605)
Q Consensus 92 ~~Y~~TGd~--~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~Y 169 (605)
..|.++|+. .|++.=...++.|.+ |+.-.-....+=.|-....-....+....=+|=.-+|+-|.-.++. ..+|
T Consensus 253 K~~il~g~~~~~y~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~ 328 (503)
T 1hcu_A 253 KMYLYDPVAFAHYKDRWVLGADSTIG-HLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLN---EQKY 328 (503)
T ss_dssp HHHHHCTTTTHHHHHHHHHHHHHHHH-HTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHH
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccc---cHHH
Confidence 667888875 677766666666653 4332210000000100000000112445678999999999987764 4566
Q ss_pred HHHHHHH
Q 007406 170 ADYYERA 176 (605)
Q Consensus 170 aD~~ERa 176 (605)
++..++.
T Consensus 329 ~~~a~~L 335 (503)
T 1hcu_A 329 IDFGIKL 335 (503)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666554
No 49
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=39.25 E-value=61 Score=35.69 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=50.2
Q ss_pred hhhHHHHhCC------chHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhc
Q 007406 90 SQMRYEVTGD------PLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRW 163 (605)
Q Consensus 90 ~a~~Y~~TGd------~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~ 163 (605)
+|..+++-++ ++++++|+..|+...++..-. +..+.. .....|+.+.-.=+++.=+-.||+.
T Consensus 252 lA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~---~~~~~Y~~~~~~Del~wAA~~Ly~a 319 (537)
T 3gzk_A 252 MAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDG---ILTGEYGDAELRDELLWASCALLRM 319 (537)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTT---CCSCCCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCcc---cccCCcCCCccchHHHHHHHHHHHH
Confidence 4455677666 688999999999987654311 111100 0112344445555678888899999
Q ss_pred cCCCchHHHHHHH
Q 007406 164 TKEMVYADYYERA 176 (605)
Q Consensus 164 tgD~~YaD~~ERa 176 (605)
|+|.+|.++++..
T Consensus 320 Tgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 320 TGDSAWARVCEPL 332 (537)
T ss_dssp HCCGGGHHHHHHH
T ss_pred hCCHHHHHHHHHh
Confidence 9999999999874
No 50
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=37.73 E-value=35 Score=37.12 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=70.0
Q ss_pred HHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccce-------eehhhhHHHHhCCchHHHHHHHHH
Q 007406 38 DVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPV-------VIGSQMRYEVTGDPLYKVTGTFFM 110 (605)
Q Consensus 38 e~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~-------~~G~a~~Y~~TGd~~y~~aa~~fw 110 (605)
|+|--||=+ |..+-++-|..+....+.. -.+..|++ +=|..-.|.++||+.|++.|...=
T Consensus 68 DsLDTL~IM-gl~~Ef~~A~~~v~~~l~f------------~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLa 134 (478)
T 1nxc_A 68 DALDTLFIM-GMKTEFQEAKSWIKKYLDF------------NVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELG 134 (478)
T ss_dssp HHHHHHHHT-TCHHHHHHHHHHHHHHCCC------------CCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ecccceeec-CCHHHHHHHHHHHHhhcCc------------cCCCccchhheehhhhhhhhhhhhccCCHHHHHHHHHHH
Confidence 888888866 4554444454443221100 01233443 347888899999999999998888
Q ss_pred HHhhccCeEeecCCCCCCCCCCCccccccCC-CCccccchh-hHHHHH-HHHHHhccCCCchHHHHHHHHhcccccc
Q 007406 111 DIVNASHGYATGGTSAGEFWSDPKRLASTLG-TENEESCTT-YNMLKV-SRHLFRWTKEMVYADYYERALTNGVLSI 184 (605)
Q Consensus 111 ~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~-~~~~EtCas-~nmlkl-~~~Lf~~tgD~~YaD~~ERalyN~ila~ 184 (605)
+.+..---..||---..=.+... .+.... ....++|.+ ...|.+ -.+|-++|||++|.|..+|+ .+.+...
T Consensus 135 d~LlpAFdTptgiP~~~vnl~~g--~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~-~~~l~~~ 208 (478)
T 1nxc_A 135 VKLLPAFHTPSGIPWALLNMKSG--IGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKI-RTVLNKL 208 (478)
T ss_dssp HHHGGGGCSSSSCCCSEEETTTC--CEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHH-HHHHHHS
T ss_pred HHHHHhhcCCCCCCcceeecccc--cCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHH-HHHHHhc
Confidence 88754322233322111111100 000000 112234433 222221 25688999999999999986 4544433
No 51
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=37.01 E-value=20 Score=33.22 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=21.4
Q ss_pred CeeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 516 ETISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 516 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
.+.+|||+.+||||+-.. .++.|.|.
T Consensus 114 ~~~~FESaa~PgWFI~Ts----~~qPV~Lt 139 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIATK----QDYWVCLA 139 (155)
T ss_pred CeeEEEeccCCCcEEEcC----CCCCeEee
Confidence 589999999999999863 26677776
No 52
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=36.74 E-value=25 Score=32.79 Aligned_cols=36 Identities=17% Similarity=0.373 Sum_probs=25.9
Q ss_pred EEEeecCCCCCCeeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 505 FRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 505 f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
||-..|. ..+.+|||+.+||||+-.. ...++-|.|.
T Consensus 111 yr~~~G~---~~~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 146 (162)
T 2wry_A 111 YRLDSPT---EGTTRFESAAFPGWFICTS--LQPRQPVGIT 146 (162)
T ss_dssp EEEEETT---TTEEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred EEecCCC---CCceEEEeccCCCcEEEcC--CCCCeEEEee
Confidence 3444664 3689999999999999853 2246677776
No 53
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=36.24 E-value=16 Score=33.77 Aligned_cols=28 Identities=7% Similarity=0.191 Sum_probs=22.1
Q ss_pred CeeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 516 ETISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 516 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
.+.+|||+.+||||+-.. ...++-|.|.
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt 135 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLG 135 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEee
Confidence 699999999999999853 2246677777
No 54
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=36.12 E-value=24 Score=36.79 Aligned_cols=70 Identities=6% Similarity=-0.176 Sum_probs=43.1
Q ss_pred cchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccc--eeehhhhHHHHhCCchHHHHHHHH
Q 007406 34 GGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIP--VVIGSQMRYEVTGDPLYKVTGTFF 109 (605)
Q Consensus 34 GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP--~~~G~a~~Y~~TGd~~y~~aa~~f 109 (605)
.|+-.++.++|+.++|++|++.|+...+...- . ..+...+..=|-. ++.-....|+.|+|+.|++.++.|
T Consensus 282 ~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~----~--~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 282 PGISLLYLYGGLALDNDYFVDKAEKILESAMQ----R--KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----H--CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----h--ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 36668899999999999999999976432110 0 0000001111111 111145678999999999888763
No 55
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=35.65 E-value=15 Score=33.95 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=21.5
Q ss_pred eeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 517 TISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 517 ~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
+.+|||+.+||||+-.. ...++-|.+.
T Consensus 107 ~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 133 (154)
T 1md6_A 107 TSSFESAAYPGWFLCTS--PEADQPVRLT 133 (154)
T ss_dssp CEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred eEEEEeccCCCcEEecC--CCCCeEEEee
Confidence 89999999999999853 2246677776
No 56
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=32.59 E-value=76 Score=35.03 Aligned_cols=150 Identities=11% Similarity=0.009 Sum_probs=81.6
Q ss_pred hhcccchhHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCcccccccc-------ceeeh---------hhhH
Q 007406 30 NEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHI-------PVVIG---------SQMR 93 (605)
Q Consensus 30 ~~E~GGmne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~Hanthi-------P~~~G---------~a~~ 93 (605)
..|.|-+..-+.+|-++|||++|.+.|++..+ .++......+.|-+.+-+.+- -+-+| +...
T Consensus 234 lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~--~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~ 311 (538)
T 1x9d_A 234 VAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQ--HIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQ 311 (538)
T ss_dssp HHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHH--HHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHH
T ss_pred eccccceeeeHHHHHHHhCCcHHHHHHHHHHH--HHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHH
Confidence 35677788889999999999999999998742 111110011111111211110 11233 4566
Q ss_pred HHHhC--CchHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCcccccc-CCCCccccchhhHHHHHHHHHHhccCCCchH
Q 007406 94 YEVTG--DPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLAST-LGTENEESCTTYNMLKVSRHLFRWTKEMVYA 170 (605)
Q Consensus 94 Y~~TG--d~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~-l~~~~~EtCas~nmlkl~~~Lf~~tgD~~Ya 170 (605)
|.++| |+.|++.=...++-|.+ |++-....+ +-.|-.... .+. .+....=+|=.-+|+-|...++. +.+|+
T Consensus 312 ~il~g~~d~~y~~my~~a~~~i~~-~L~~~~~~~-~~~~v~~~~-~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l 385 (538)
T 1x9d_A 312 WIQGGKQETQLLEDYVEAIEGVRT-HLLRHSEPS-KLTFVGELA-HGRFSAKMDHLVCFLPGTLALGVYHGL---PASHM 385 (538)
T ss_dssp HHHTTSCCHHHHHHHHHHHHHHHH-HTEEECTTT-CCEEECEEE-TTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHH
T ss_pred HHHcCCchHHHHHHHHHHHHHHHH-HhccCCCCC-CceEEEecc-CCccCcccchHhhhhhhHHHhcCcccC---cHHHH
Confidence 78888 78888877777777764 443221110 000100000 001 13456678999999999887753 34466
Q ss_pred HHHHHH------HhcccccccCC
Q 007406 171 DYYERA------LTNGVLSIQRG 187 (605)
Q Consensus 171 D~~ERa------lyN~ila~q~~ 187 (605)
+.-++. +|+....+..|
T Consensus 386 ~~a~~L~~tC~~~Y~~~~tGl~P 408 (538)
T 1x9d_A 386 ELAQELMETCYQMNRQMETGLSP 408 (538)
T ss_dssp HHHHHHHHHHHHHHHTSTTSCCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCc
Confidence 655443 35554444433
No 57
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=31.92 E-value=3e+02 Score=29.89 Aligned_cols=51 Identities=24% Similarity=0.327 Sum_probs=37.5
Q ss_pred CCCceEEEecCceeEEEeCCCCCCCCceEEEeecCCCCCCeeEEEeccCCCeEEEec
Q 007406 477 FPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSG 533 (605)
Q Consensus 477 ~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~ 533 (605)
.-|.|+.-.+....|.+.++..-+.+.+|.++- ..+.|+|++. .|+||.+.
T Consensus 226 ~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~----~~~qVaL~s~--ngkyVsa~ 276 (493)
T 3llp_A 226 CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ----SCAQVVLQAA--NERNVSTR 276 (493)
T ss_dssp TTSCBEEEETTTTEEEECC---CCGGGCEEEEE----CCCEEEEECT--TSCEEECC
T ss_pred CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe----CCCEEEEEec--CCcEEEec
Confidence 567778777766667665566667789999996 3689999987 89999864
No 58
>1ilt_A Interleukin-1 receptor antagonist; cytokine; 2.00A {Homo sapiens} SCOP: b.42.1.2 PDB: 1ilr_1 1ira_X* 2irt_A 1irp_A
Probab=31.84 E-value=18 Score=33.44 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=21.1
Q ss_pred eeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 517 TISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 517 ~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
+.+|||+.+||||+-.. ...+.-|.+.
T Consensus 108 ~~~fESaa~PgWFI~Ts--~~~~~PV~Lt 134 (152)
T 1ilt_A 108 TTSFESAACPGWFLCTA--MEADQPVSLT 134 (152)
T ss_pred ceEEEeccCCCcEEEcC--CcCCeEEEee
Confidence 89999999999999853 1235677776
No 59
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=27.65 E-value=2.3e+02 Score=24.88 Aligned_cols=38 Identities=21% Similarity=0.220 Sum_probs=23.0
Q ss_pred eEEEEEEeCCCCCeeeEEEEeecC-cccCCCcEEEECCeee
Q 007406 282 RMTHTFSSKQEASQSSSLNLRIPL-WTNSNGAKATLNGQSL 321 (605)
Q Consensus 282 ~V~ltv~~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~~ 321 (605)
.|+++|+.. +....+|.+|.=. -.......|.|||+.+
T Consensus 41 ~v~~~V~v~--~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~ 79 (144)
T 2w47_A 41 YIEWNVNAP--SSGSYALIFRYANGTTANRPMRITVNGNIV 79 (144)
T ss_dssp EEEEEEEES--SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC--CCcEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 566667653 3556677777622 1111257899999863
No 60
>3ltq_A Interleukin-1 beta; lanthanide binding TAG, LBT, terbium, IL1B, cytokine, inflam response, mitogen, pyrogen, secreted; 2.10A {Homo sapiens} SCOP: b.42.1.2
Probab=25.29 E-value=31 Score=32.48 Aligned_cols=28 Identities=7% Similarity=0.191 Sum_probs=21.5
Q ss_pred CeeEEEeccCCCeEEEeccccCCCCeEEEE
Q 007406 516 ETISLEAVNQNGCFVYSGVNFNSGASLKLS 545 (605)
Q Consensus 516 ~~vsles~~~pg~~~~~~~~~~~g~~~~~~ 545 (605)
.+.+|||+.+||||+-.. ...++.|.|.
T Consensus 126 s~stFESaa~PGWFI~Ts--~~~~qPV~Lt 153 (171)
T 3ltq_A 126 NKLEFESAQFPNWYISTS--QAENMPVFLG 153 (171)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CceEEEecCCCCCEEeec--CCCCeeEEee
Confidence 478999999999999853 2245677776
No 61
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=24.58 E-value=91 Score=27.69 Aligned_cols=35 Identities=26% Similarity=0.200 Sum_probs=23.6
Q ss_pred cEEEECCeeecCCCCCCEEEEEeeeCCCCEEEEEecceeEEEec
Q 007406 312 AKATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAI 355 (605)
Q Consensus 312 ~~v~VNG~~~~~~~~ggy~~I~R~W~~GD~V~L~lpm~lr~~~~ 355 (605)
-.|+|||+.+.. + +. =+.||+|+|.++-..+...+
T Consensus 34 G~V~VNG~~vk~---s-~~-----V~~GD~I~I~~~~~~~~~~v 68 (133)
T 1dm9_A 34 GKVHYNGQRSKP---S-KI-----VELNATLTLRQGNDERTVIV 68 (133)
T ss_dssp TCEEETTEECCT---T-CB-----CCTTCEEEEEETTEEEEEEE
T ss_pred CcEEECCEEcCC---C-CE-----eCCCCEEEEEeCCceeeEEE
Confidence 368999997532 1 11 26799999999876655443
No 62
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=23.78 E-value=1.6e+02 Score=32.87 Aligned_cols=133 Identities=9% Similarity=0.023 Sum_probs=72.1
Q ss_pred hhHHHHHHHHH-----cCCHHHHHHHhhccc---CCcchhhhhcCCCCCccccccccceeehhhhHHHHhCCchHHHHHH
Q 007406 36 MNDVLYRLYTI-----TQDPKHLLLAHLFDK---PCFLGLLAVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGT 107 (605)
Q Consensus 36 mne~L~~LY~~-----TGd~~yL~lA~~F~~---~~~~~~l~~~~D~l~g~HanthiP~~~G~a~~Y~~TGd~~y~~aa~ 107 (605)
|.-+|+.-+++ .+.++||+.|++... .. ..... ++.-.+. ....-.+-|++.+|+.|||+.|++.++
T Consensus 255 ~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~-~~~y~--~~g~~~~--~De~~~~WAA~eLy~ATgd~~YL~~a~ 329 (586)
T 3h7l_A 255 AIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEH-NTQYL--NDGEENI--IDEYCALLASVELFKATKETRYLEESR 329 (586)
T ss_dssp HHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHH-HHHHS--TTSCCCH--HHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhc-Ccccc--CCCCccc--hhHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 45888888888 667899999997421 00 01111 1100110 111112578899999999999999999
Q ss_pred HHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchhhHHHHHHHHHHhccCCCchHHHHHHHHhcc
Q 007406 108 FFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNG 180 (605)
Q Consensus 108 ~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas~nmlkl~~~Lf~~tgD~~YaD~~ERalyN~ 180 (605)
.+-+.+.. |..... . .+=+|..+++-.... .... =++..++-|++ |...++|.++.+.++..+-++
T Consensus 330 ~~a~~l~~-~~~~~~-~-~g~~w~~~d~~~r~~-~d~a--~~gl~~iaLl~-l~~~~~d~~~~~~a~~~i~~~ 395 (586)
T 3h7l_A 330 LWAQRLVA-RQMSDE-Q-IQHFWSANQDGSRPY-FHAA--EAGLPTIALCE-YLAIEDDSVQTESVKCIVNRA 395 (586)
T ss_dssp HHHHHHHT-TEECCS-S-CSSEEBSSSSSSSBC-CCTT--TTTHHHHHHHH-HHHHCCSTTTTHHHHHHHHHH
T ss_pred HHHHHHHH-hccCCc-c-CCCcCCCcccCCccc-cccc--ccHHHHHHHHH-hhhhcCChHHHHHHHHHHHHH
Confidence 88888764 322211 1 112344333211100 1111 14555554444 457788776666655554444
No 63
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=23.56 E-value=1.6e+02 Score=28.51 Aligned_cols=55 Identities=18% Similarity=0.296 Sum_probs=35.0
Q ss_pred eeEEEEeec-CcccC--CCcEEEECCeeecCCC-CCCEEEEE-----------eeeCCCCEEEEEeccee
Q 007406 296 SSSLNLRIP-LWTNS--NGAKATLNGQSLSLPA-PGNFISVT-----------QRWSSTDKLTIQLPINL 350 (605)
Q Consensus 296 ~ftL~LRIP-~Wa~~--~~~~v~VNG~~~~~~~-~ggy~~I~-----------R~W~~GD~V~L~lpm~l 350 (605)
...|.+++| .+.+. -+-.|.|||.-..... .++.+.++ ..|+.||.|-|+-.|++
T Consensus 21 ~~~l~i~~~~~~~~~l~~g~SIAvnGvcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEral~~ 90 (213)
T 1i8d_A 21 FRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKF 90 (213)
T ss_dssp EEEEEEECCGGGTTTCCTTCEEEETTEEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEECCBT
T ss_pred cEEEEEEEChHHhccCCCCcEEEECCEEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCcCCCC
Confidence 456777777 34221 2578999998765532 34455554 34889999888866643
No 64
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=23.44 E-value=58 Score=35.36 Aligned_cols=133 Identities=12% Similarity=0.044 Sum_probs=72.7
Q ss_pred ccch----hHHHHHHHHHcCCHHHHHHHhhcccCCcchhhhhcCCCCCccccccccce-------eehhhhHHHHh-CC-
Q 007406 33 TGGM----NDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPV-------VIGSQMRYEVT-GD- 99 (605)
Q Consensus 33 ~GGm----ne~L~~LY~~TGd~~yL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~-------~~G~a~~Y~~T-Gd- 99 (605)
+||+ .|+|--||=+ |..+-++-|..+.+. +.. .. .+..|++ +=|+.-.|.++ ||
T Consensus 41 ~gg~g~TlVDsLDTL~IM-gl~~Ef~~a~~~v~~-~~f----~~-------~~~~vsvFETtIR~LGGLLSAy~Ls~g~~ 107 (475)
T 2ri9_A 41 RNGWGASAVDALSTAVIM-GKADVVNAILEHVAD-IDF----SK-------TSDTVSLFETTIRYLAGMLSGYDLLQGPA 107 (475)
T ss_dssp TTTSCHHHHHHHHHHHHH-TCHHHHHHHHHHHHH-CCT----TC-------CSSCEEHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcceeehhhccchhhc-CCHHHHHHHHHHHHh-CCC----Cc-------CCCccchhheehHhHhHHhHHHHhccCcc
Confidence 5664 3888888865 555444444444321 100 00 0223443 44788889999 87
Q ss_pred ----------chHHHHHHHHHHHhhccCeEeecCCCCCCCCCCCccccccCCCCccccchh-hHHHHH-HHHHHhccCCC
Q 007406 100 ----------PLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTT-YNMLKV-SRHLFRWTKEM 167 (605)
Q Consensus 100 ----------~~y~~aa~~fw~~v~~~h~y~TGG~g~~E~f~~p~~L~~~l~~~~~EtCas-~nmlkl-~~~Lf~~tgD~ 167 (605)
+.+++.|...=+.+..---..||---..=.+... ......++|.+ ...|.+ -.+|-++|||+
T Consensus 108 ~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~------~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~ 181 (475)
T 2ri9_A 108 KNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSH------GNDGATTNGLAVTGTLVLEWTRLSDLTGDE 181 (475)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTC------CBCCCSEEEHHHHHSCHHHHHHHHHHHSCT
T ss_pred ccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccC------CCcCCCccchhccccceeeHHHHHHHhCCH
Confidence 6888888887777754322334432222111110 01123345644 222222 24588999999
Q ss_pred chHHHHHHHHhccccccc
Q 007406 168 VYADYYERALTNGVLSIQ 185 (605)
Q Consensus 168 ~YaD~~ERalyN~ila~q 185 (605)
+|.|..+|+ ++.+...+
T Consensus 182 ~Y~~~a~~~-~~~l~~~~ 198 (475)
T 2ri9_A 182 EYAKLSQKA-ESYLLKPQ 198 (475)
T ss_dssp HHHHHHHHH-HHHHHSCS
T ss_pred HHHHHHHHH-HHHHHhhc
Confidence 999999987 45554443
No 65
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=23.01 E-value=1.4e+02 Score=27.38 Aligned_cols=45 Identities=11% Similarity=0.035 Sum_probs=33.6
Q ss_pred CCCceEEEee-cCCCCCCeeEEEeccCCCeEEEec-cccCCCCeEEEE
Q 007406 500 GDSSVFRLVA-GLDGKDETISLEAVNQNGCFVYSG-VNFNSGASLKLS 545 (605)
Q Consensus 500 ~~~s~f~~vp-gl~g~~~~vsles~~~pg~~~~~~-~~~~~g~~~~~~ 545 (605)
.++..|||.| |-+| .|+..+|+...+|.=+-+. ..-..|++|..-
T Consensus 92 ~~~~rWrI~~~G~~~-~G~f~I~nk~~s~~vldV~~~~t~~GAdVi~~ 138 (153)
T 2x2s_A 92 DPSARWTIKPATTHQ-YEVFTINNKVSELGQLTVKDYSTHSGADVLSA 138 (153)
T ss_dssp CGGGCEEEEESCC---CCCEEEEESSGGGCEEEEGGGCCSTTCBEEEE
T ss_pred CccceEEEEeccccC-cceEEEecccCCCceEEeccCCCCCCceEEEe
Confidence 3889999997 8899 6999999999999887643 444577777554
No 66
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=22.98 E-value=4.7e+02 Score=29.11 Aligned_cols=42 Identities=21% Similarity=0.372 Sum_probs=25.6
Q ss_pred eEEEEEEeCCCCCeeeEEEE---eecCcccCCCcEEEECCeeecCCC
Q 007406 282 RMTHTFSSKQEASQSSSLNL---RIPLWTNSNGAKATLNGQSLSLPA 325 (605)
Q Consensus 282 ~V~ltv~~~~~~~~~ftL~L---RIP~Wa~~~~~~v~VNG~~~~~~~ 325 (605)
.++|+|+.-+.+..+.+|++ |..+=.+ .++|+|||+++..+.
T Consensus 490 ~~~F~i~~v~tg~g~A~LRvg~gR~~g~s~--~p~V~vNG~~v~vP~ 534 (591)
T 4aw7_A 490 SLSFPFTGIESGSGRASLRMSIGRPVSASK--KPVVKINGTAVSVPD 534 (591)
T ss_dssp CEEEEEEEECCCSEEEEEEEEEEEETTSCS--CCEEEETTEEECCCS
T ss_pred ceEEEEecccCCCceEEEEEEcCcCCCcCC--CCEEEECCEEeccCc
Confidence 46677762111234455555 4555444 689999999998653
No 67
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=22.87 E-value=1e+02 Score=33.83 Aligned_cols=76 Identities=9% Similarity=0.007 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHHcCC------HHHHHHHhhccc-----CCcchhhhhcCCCCCccccccccc--eeehhhhHHHHhCCc
Q 007406 34 GGMNDVLYRLYTITQD------PKHLLLAHLFDK-----PCFLGLLAVQADDISGFHANTHIP--VVIGSQMRYEVTGDP 100 (605)
Q Consensus 34 GGmne~L~~LY~~TGd------~~yL~lA~~F~~-----~~~~~~l~~~~D~l~g~HanthiP--~~~G~a~~Y~~TGd~ 100 (605)
|-|.-+|+.-+++-++ +++|+-|+...+ +... .....+...+.+.-+..- .+-+++.+|+.|||+
T Consensus 246 ~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~--~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~ 323 (537)
T 3gzk_A 246 ATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP--FHNPDGILTGEYGDAELRDELLWASCALLRMTGDS 323 (537)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC--CCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc--ccCCcccccCCcCCCccchHHHHHHHHHHHHhCCH
Confidence 4455778888888877 899999987531 1110 001112223333211111 356789999999999
Q ss_pred hHHHHHHHHHH
Q 007406 101 LYKVTGTFFMD 111 (605)
Q Consensus 101 ~y~~aa~~fw~ 111 (605)
.|++.++..++
T Consensus 324 ~Yl~~a~~~~~ 334 (537)
T 3gzk_A 324 AWARVCEPLLD 334 (537)
T ss_dssp GGHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999887665
No 68
>4fbj_A CIF, hypothetical protein; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.60A {Photorhabdus luminescens subsp} PDB: 3gqj_A
Probab=21.72 E-value=39 Score=32.91 Aligned_cols=53 Identities=13% Similarity=0.197 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhhhhccccHHHHHHHhhhcccchh-----HHHHHHHHHcCCHHHHHHHhh
Q 007406 3 KWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMN-----DVLYRLYTITQDPKHLLLAHL 58 (605)
Q Consensus 3 ~~m~~~~~~r~~~~~~~~~~~~~~~~l~~E~GGmn-----e~L~~LY~~TGd~~yL~lA~~ 58 (605)
.+++||+-+|-+ ++.+++..-++|..||-+|. +-++.++.+-||.+-+++-+.
T Consensus 164 lr~eDWm~~rg~---~pIsLd~l~~~ls~~F~~ms~d~~~~lIA~ifdIdkdv~~v~~~~i 221 (261)
T 4fbj_A 164 LKIADWLNSRGK---DAVSLNKLKKLLSREFNLLSDDEKRALISETLDIHKDVSNVELDRI 221 (261)
T ss_dssp BCHHHHHHHGGG---SEEEHHHHHHHHSGGGGGSCHHHHHHHHHHHHCTTCCGGGCCGGGS
T ss_pred eeHHHHHhhcCC---CCccHHHHHHHHHHhhccCCchHHHHHHHHHHcccCCHHHhhhhhh
Confidence 468999977654 68899999899999999996 567888888888877776554
No 69
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=21.39 E-value=2.1e+02 Score=26.96 Aligned_cols=56 Identities=13% Similarity=0.178 Sum_probs=31.6
Q ss_pred eeeEEEEeecCcccC---CCcEEEECCeeecCCC-CCCEEEEE----------eeeCCCCEEEEEeccee
Q 007406 295 QSSSLNLRIPLWTNS---NGAKATLNGQSLSLPA-PGNFISVT----------QRWSSTDKLTIQLPINL 350 (605)
Q Consensus 295 ~~ftL~LRIP~Wa~~---~~~~v~VNG~~~~~~~-~ggy~~I~----------R~W~~GD~V~L~lpm~l 350 (605)
....|.++.|..... -+-.|.|||.-..... .++.+.++ ..|+.||.|-|+-.|++
T Consensus 20 ~~~~l~i~~~~~~~~~~~~GdSIAvnGvCLTV~~~~~~~f~vdv~ETl~~T~Lg~l~~G~~VNLEral~~ 89 (186)
T 3ddy_A 20 DSQRHGIAFPEGMFQLVDVDTVMLVNGCSNTVVRILGDMVYFDIDQALGTTTFDGLKEGDQVNLEIHPKF 89 (186)
T ss_dssp SCEEEEEECCTTTGGGCCTTCEEEETTEEEEEEEEETTEEEEEECTTTTTSSGGGCCTTCEEEEECCC--
T ss_pred CcEEEEEEeChHHhccCCCCCeEEEeeEEEEEEEEcCCEEEEEhHHhhhhCchhhcCCCCEEEECCCCCC
Confidence 345677777765211 1578999998665432 33344433 24677777766655543
No 70
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=21.15 E-value=1.9e+02 Score=28.72 Aligned_cols=110 Identities=25% Similarity=0.258 Sum_probs=53.3
Q ss_pred EecCceeEEEeCCCCCCCCceEEEeecCCC-CCCeeEEEeccCCCeEEEeccccCCCCeEEEEeccCCCccccccccccc
Q 007406 484 QQGTDGELVVSDSPKEGDSSVFRLVAGLDG-KDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFV 562 (605)
Q Consensus 484 ~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g-~~~~vsles~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asF~ 562 (605)
+||-.-.++|. ++...+.+.|-+.|+..+ ..+.|- .++..-.|.+. .|..|.|.|+...+. .+--+=|.
T Consensus 104 ~WGqGT~VTVS-Sast~~ps~~~l~~~~sgGSgsdiv---ltQsP~slsvs----~G~~vtlsC~~S~~~--~~~l~Wyq 173 (254)
T 4f9p_D 104 YWGQGTLVTVS-AAGGGGSGGGGSGGGGSGGGGSDIV---LTQSPVTLSVT----PGDSVSLSCRASQSI--SNNLHWYR 173 (254)
T ss_dssp EECCCEEEEEC-C-------------------CCSCC---EEEECSEEEEC----TTCEEEEEEEESSCC--TTCCEEEE
T ss_pred CcCCCEEEEEe-CCCCcCCCCCCCccccccccccccc---cccCCceeEEc----CCCcEeeEEEccCcc--cCCcEEEE
Confidence 46655567765 455566788888887633 222222 24444445432 599999999632221 22233444
Q ss_pred cccCcc------------ccCcceEEEecCCCceeecccccccccceEEEEeec
Q 007406 563 MEKGIS------------EYHPISFVAKGARRNFLLAPLLSFRDETYTVYFNIQ 604 (605)
Q Consensus 563 ~~~gl~------------~~~~~Sf~a~g~~~~~ll~pl~~~~~~~~~~~~~~~ 604 (605)
+++|=+ +--|--|-..|.+-+|-|. +.+|+-|--.+||=.|
T Consensus 174 Q~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLt-Is~lq~eD~A~YYC~q 226 (254)
T 4f9p_D 174 QKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLS-INSVETEDFGIYFCQQ 226 (254)
T ss_dssp ECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEE-EESCCTTCCEEEEEEE
T ss_pred ECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEE-ECCCCHHHCEEEEEee
Confidence 555522 1124457777777777654 7899999999999654
No 71
>3a35_A Lumazine protein, LUMP; luminous bacteria, homologue of riboflavin synthase, luminescent protein; HET: RBF; 1.42A {Photobacterium kishitanii} PDB: 3a3b_B* 3a3g_A*
Probab=20.98 E-value=1.5e+02 Score=28.08 Aligned_cols=53 Identities=15% Similarity=0.319 Sum_probs=32.7
Q ss_pred eEEEEeecC-c---ccCCCcEEEECCeeecCCC-CCCEEEEE----------eeeCCCCEEEEEeccee
Q 007406 297 SSLNLRIPL-W---TNSNGAKATLNGQSLSLPA-PGNFISVT----------QRWSSTDKLTIQLPINL 350 (605)
Q Consensus 297 ftL~LRIP~-W---a~~~~~~v~VNG~~~~~~~-~ggy~~I~----------R~W~~GD~V~L~lpm~l 350 (605)
..+.|+||. + ... +-.|.|||.-..... .++.+.++ ..|+.||.|-|+..|++
T Consensus 22 ~~~~i~i~~~~~~~l~~-g~SIAvnGvcLTV~~v~~~~F~v~ipeTl~~T~Lg~l~~Gd~VNLEral~~ 89 (190)
T 3a35_A 22 QRHGITFPKDILESVEK-GTVMLVNGCSLTVVRISGDVVYFDIDQAINTTTFRELEVGNKVNLEVRPEF 89 (190)
T ss_dssp EEEEEECCHHHHHTCCT-TCEEEETTEEEEEEEEETTEEEEEESTTTTTSSGGGCCTTCEEEEECCCSS
T ss_pred EEEEEEECchhhccCCC-CCEEEECCEEeeEEEEcCCEEEEecHHHHhhcccccCCCCCEEEeCcCCcC
Confidence 456677763 2 222 578999998665432 33344444 23888888888876654
No 72
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=20.48 E-value=26 Score=26.22 Aligned_cols=19 Identities=16% Similarity=0.487 Sum_probs=15.2
Q ss_pred CCCEEEEEeeeCCCCEEEEE
Q 007406 326 PGNFISVTQRWSSTDKLTIQ 345 (605)
Q Consensus 326 ~ggy~~I~R~W~~GD~V~L~ 345 (605)
+=||-.|..+| +||+|+++
T Consensus 29 elgyndinvtw-dgdtvtve 47 (62)
T 2gjh_A 29 ELGYNDINVTW-DGDTVTVE 47 (62)
T ss_dssp HTTCCSCEEEE-CSSCEEEE
T ss_pred HhCcccceeEE-cCCEEEEE
Confidence 45788899999 68888775
Done!