BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007415
(604 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WU9|C3H64_ARATH Zinc finger CCCH domain-containing protein 64 OS=Arabidopsis
thaliana GN=At5g56900 PE=2 SV=1
Length = 596
Score = 891 bits (2303), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/602 (71%), Positives = 499/602 (82%), Gaps = 9/602 (1%)
Query: 4 PRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
PRILLCGD LGRLNQLFKRVQSV+KSAGPFDA++CVGQFFPDS E+LDEF++YVEGR+++
Sbjct: 3 PRILLCGDPLGRLNQLFKRVQSVSKSAGPFDALICVGQFFPDSPEILDEFLDYVEGRAQV 62
Query: 64 PIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLSVAYL 123
PIPTYF GDYGV A K+L SK + NQGFKMDG +V NLFWL+GSG F+LHGLSVAYL
Sbjct: 63 PIPTYFTGDYGVVAPKILSTTSKKAENQGFKMDGLEVCHNLFWLRGSGKFSLHGLSVAYL 122
Query: 124 SGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVGISDS 183
SGRQSSE Q FG YSQDDVDALRALAEEPG VDLFLTNEWP+GVTN+AA SD+ VGISDS
Sbjct: 123 SGRQSSESQ-FGKYSQDDVDALRALAEEPGGVDLFLTNEWPAGVTNRAAVSDIPVGISDS 181
Query: 184 SNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQKFIH 243
S +DSTVSELV E+KPRYHIAGS GVFYAREPY N ++ HVTRF+GLA VGNK KQKF+H
Sbjct: 182 SCSDSTVSELVMEVKPRYHIAGSMGVFYAREPYLNAESTHVTRFIGLAQVGNKNKQKFLH 241
Query: 244 ALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQK 303
ALSPTP +TMS A++S K P TTL PY D + SK KRP+DS SDSQYWRYDV K
Sbjct: 242 ALSPTPTSTMSPAELSAKPPKTTLWPYNLQDGAAESK---KRPNDSDSDSQYWRYDVP-K 297
Query: 304 RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPEC 363
RQK G G+K+CFKF+ SGSCPRGE C+F+H+ +AREQC RGVCLD IIKGKCEKGPEC
Sbjct: 298 RQK-SGSQGEKLCFKFVCSGSCPRGEDCHFQHNAEAREQCRRGVCLDLIIKGKCEKGPEC 356
Query: 364 SYKHSLQNDDS-QRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLV 422
SYKH Q++ S QR RSENA NRSKECWFCLSSPSVESHLIVSVGE +YCALPKG LV
Sbjct: 357 SYKHEFQDESSIQRKPRSENA--NRSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLV 414
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQ 482
EDH+L+IP+EH+PNT+ SPE E EL R+QN L YK+QG +AVFFE +SKR +HANLQ
Sbjct: 415 EDHILIIPIEHLPNTLVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQ 474
Query: 483 AVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEG 542
VP+P+S+A + +IF+LAAEKLGFK + K + S+DGR+ L+ +++ FYVELP+G
Sbjct: 475 VVPVPSSRARLLPNIFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELPDG 534
Query: 543 TVLSHLIEENERFPAQFGREVLAGLLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFDP 602
TVLSH +EENE FPAQFGREVLAGLL I D+ADWRNC + +EEE K+ EDFKK+F+ FDP
Sbjct: 535 TVLSHTLEENEVFPAQFGREVLAGLLKIPDRADWRNCKISQEEEAKLAEDFKKQFQEFDP 594
Query: 603 NQ 604
Q
Sbjct: 595 CQ 596
>sp|Q69NK8|C3H59_ORYSJ Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa
subsp. japonica GN=Os09g0364000 PE=2 SV=1
Length = 613
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/606 (59%), Positives = 449/606 (74%), Gaps = 13/606 (2%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF-PDSSELLD----EFMNYVEG 59
RILL GD GRL+QLFKRV SVN+S GPF A+LCVGQFF PD+ + E +Y+EG
Sbjct: 15 RILLAGDANGRLHQLFKRVTSVNQSTGPFHALLCVGQFFSPDAGDGDGGGGGEVADYLEG 74
Query: 60 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTLHGLS 119
R+ +PIPTYF GDYG A ++L A+ S+ +GF G ++ NLFWL+GS FTLHGLS
Sbjct: 75 RAAVPIPTYFTGDYGPAAPRLLAKAA--SSARGFSPGGIQICPNLFWLRGSARFTLHGLS 132
Query: 120 VAYLSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAAASDMLVG 179
V YLSGR+ G G YSQDDVDALRALAEEPGIVDLFLTNEWP+GV N S+
Sbjct: 133 VVYLSGRKGPGGP--GCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVNGVDTSNAPSQ 190
Query: 180 ISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHVTRFLGLAPVGNKEKQ 239
ISD D V+ELVAEIKPRYHIAGSKGVFYAREPY + A HVTRF+GLA VGNKEKQ
Sbjct: 191 ISDPHGYDPVVAELVAEIKPRYHIAGSKGVFYAREPYVSDSAAHVTRFIGLANVGNKEKQ 250
Query: 240 KFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQYWRYD 299
KFIHA+SPTPA+TMS+ DI + PNTTLSPY + +E KRP++ +D QYWRYD
Sbjct: 251 KFIHAISPTPASTMSSVDIHARPPNTTLSPYISPAKSVPVEETPKRPAED-ADLQYWRYD 309
Query: 300 VSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEK 359
V K+Q+HG G+++CFKF SGSCPRG KCN+RHD +ARE R VC DF+ KGKCEK
Sbjct: 310 V--KKQRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHDEEAREHYNRNVCFDFLNKGKCEK 367
Query: 360 GPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG 419
GPEC + HSL ++ + R + + CWFCLSSP VESHL++S+GE YYCAL KG
Sbjct: 368 GPECRFAHSLSDEGAVRDTKPRSERRRVESSCWFCLSSPDVESHLVISIGEGYYCALAKG 427
Query: 420 PLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHA 479
PLV +HVLVIPVEH +T+ E E ELGR++++L Y++ QGK A++FEW+S++ HA
Sbjct: 428 PLVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQQSRHA 487
Query: 480 NLQAVPIPTSKAAAVQDIFNLAAEKLGFKF-LATKSSKSSDGRRSLRAQFDRNCSFFYVE 538
NLQAVP+P SKA++V+ IF+LAA++LGF+F + ++ R LR++ D S FYVE
Sbjct: 488 NLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGDANRARELLRSECDSKSSLFYVE 547
Query: 539 LPEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWRNCMLGKEEETKMVEDFKKRFE 598
LPEG+VL HL++ NE+FPAQFGREVLAGLL++AD+ADWRNC + KEEE +MV+DFK+ F
Sbjct: 548 LPEGSVLLHLVDSNEKFPAQFGREVLAGLLSMADRADWRNCKVSKEEEIQMVDDFKQGFR 607
Query: 599 AFDPNQ 604
FDP +
Sbjct: 608 EFDPAE 613
>sp|Q5RGJ5|C19L1_DANRE CWF19-like protein 1 OS=Danio rerio GN=cwf19l1 PE=2 SV=1
Length = 544
Score = 276 bits (707), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 295/617 (47%), Gaps = 100/617 (16%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV GR+N LF RV ++ K +G FD +LCVG FF S E E+ Y G +
Sbjct: 5 PLRVLACGDVEGRINALFNRVNAIQKKSGQFDLLLCVGDFFGSSPEAEAEWATYKSGAKK 64
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI T +G AAS+ + DG ++ +N+ L G FT GL +A
Sbjct: 65 APIHTCILG-----------AASQETVKYFPSSDGCELAENITCLGRRGIFTGASGLQIA 113
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRA-LAEEPGI--VDLFLTNEWPSGVTN--KAAASD 175
Y+SGR++ E ++ D+ AL A L VD+ LT++WP GV + +D
Sbjct: 114 YVSGREAHQEPAPSHCFTPKDITALVAPLLSNSKFRGVDILLTSQWPRGVCQYGNSPETD 173
Query: 176 M-LVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLG 229
M G+S ++++L ++KPRYH AG +GV Y R PY N + HV+RF+
Sbjct: 174 MKFCGVS-------SIADLADKLKPRYHFAGLEGVHYERLPYRNHVVLQENTQHVSRFIA 226
Query: 230 LAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDS 289
LA V N K+K+++A + P M + ++ + + T +PY L
Sbjct: 227 LATVNNPAKKKYLYAFNIIPMKNMDSTELVKQPQDVTENPYRKL---------------- 270
Query: 290 VSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCL 349
+ D + R S TDA+E+
Sbjct: 271 MKDGKKERQSASM----------------------------------TDAQEEPASQFFF 296
Query: 350 DFIIKGKCEKGPECSYKHSLQND-DSQRTHRSENASANRSKECWFCLSSPSVESHLIVSV 408
D +K P+ + Q+D D H+ + CWFCL+SP VE HL++S+
Sbjct: 297 DL-----GQKNPQRQHGRKRQSDGDRPNQHKQPRRPPQPTGPCWFCLASPEVEKHLVISI 351
Query: 409 GEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVF 468
G + Y AL KG L DHVL++P+ H + + + E +E+ +++++ + K++GK V
Sbjct: 352 GTHCYMALAKGGLTPDHVLLLPIGHYQSVVDLASEVVEEMEKYKSAFKKFCKSKGKRCVL 411
Query: 469 FEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRA 526
FE + R H LQAVP+P K + +++ F AE+ + + + L+
Sbjct: 412 FE-RNYRSQHLQLQAVPVPMEKCSTEDIKEAFMTQAEEQQMELMEIPA------HTDLKQ 464
Query: 527 QFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADWRNCMLGKE 584
+FYVEL G L + I++N FP QFGREVLA ++NI ++DWR C + +E
Sbjct: 465 IAPPGTPYFYVELDTGDKLFYRIKKN--FPLQFGREVLASEAVMNIPMRSDWRECKISRE 522
Query: 585 EETKMVEDFKKRFEAFD 601
EE + + +E FD
Sbjct: 523 EEEDQAKQVRSDYEPFD 539
>sp|Q8AVL0|C19L1_XENLA CWF19-like protein 1 OS=Xenopus laevis GN=cwf19l1 PE=2 SV=1
Length = 540
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 197/613 (32%), Positives = 299/613 (48%), Gaps = 100/613 (16%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
R+L CGDV GR + LF RV+ + K +G FD +LCVG FF S E + Y G + P
Sbjct: 7 RVLTCGDVYGRFDVLFNRVRVIQKKSGQFDMLLCVGSFFGTSPESQTHWDEYKSGAKKAP 66
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFK-MDGFKVTDNLFWLKGSGNFT-LHGLSVAY 122
I TY +G A+ + FK +DG ++ N+ +L G FT GL +AY
Sbjct: 67 IQTYVLG------------ANNQETVKHFKDVDGCELAANITYLGRKGLFTGASGLQIAY 114
Query: 123 LSG-RQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAAASDMLV 178
LSG SSE ++ DV +L+ +L VD+ LT+ WP V+N A L
Sbjct: 115 LSGIESSSEPAPAYCFTAKDVTSLKMSLMSNSKFKGVDILLTSSWPKDVSNYGNA---LP 171
Query: 179 GISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLAPV 233
+ + +S L +KPRYH A +G Y R PY N +A HV+RF+ LA V
Sbjct: 172 NEASKKCGSALISNLAFNLKPRYHFAALEGENYERLPYRNHLVLQENAQHVSRFISLASV 231
Query: 234 GNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDS 293
GN +K+K+I+A + P + AD+ K+P D V+++
Sbjct: 232 GNLDKKKYIYAFNIVPMSLTDIADL------------------------VKQPLD-VTEN 266
Query: 294 QYWRYDVSQKRQK-HGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFI 352
Y + D + K + + ++ +F + + P+G+K TD
Sbjct: 267 PYRKSDKDTPKSKGNKSAEEEEPTQQFFFDLNKPQGKK----RQTDG------------- 309
Query: 353 IKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYY 412
KG + + KH + CWFCL+SP VE HL+VS+G+
Sbjct: 310 -KGGRQSQAKQPRKH-----------------PQPTGPCWFCLASPEVEKHLVVSIGDNC 351
Query: 413 YCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWL 472
Y AL KG L+ DHVL++P+ H +T+ S + KE+ +++ +L ++K +GK V FE
Sbjct: 352 YVALAKGGLMSDHVLILPIGHYQSTVDLSSDVVKEVEQYKAALRTFFKTKGKRYVMFER- 410
Query: 473 SKRGTHANLQAVPIPTS--KAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDR 530
+ + H LQ VP+P S +++ F L A++ G + L + SD ++ +
Sbjct: 411 NYKSQHLQLQVVPLPLSCCTTEDIKETFILQAQEQGMELLEI--PEHSDIKQIAQP---- 464
Query: 531 NCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADWRNCMLGKEEETK 588
+FYVEL G L H I+++ FP QFGREVLA +LNI +ADW++C + EE
Sbjct: 465 GTPYFYVELDSGEKLFHRIKKH--FPLQFGREVLASEAILNIPTRADWKDCKSSRAEEED 522
Query: 589 MVEDFKKRFEAFD 601
+ + F+ FE FD
Sbjct: 523 LTKTFRDAFEPFD 535
>sp|O16216|C19L1_CAEEL CWF19-like protein 1 homolog OS=Caenorhabditis elegans GN=F17A9.2
PE=3 SV=2
Length = 533
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 277/608 (45%), Gaps = 100/608 (16%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
+IL CGDV G +L K++ + K GPFD++ CVG+FF D + ++ +N G E P
Sbjct: 7 KILCCGDVNGNFVELIKKISTTEKKNGPFDSLFCVGEFFGDDDDSNEKVIN---GNIEFP 63
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLSVAYL 123
IPTY +G + + + + + + NL +L G T GL +AYL
Sbjct: 64 IPTYILG------------PANPRYSYLYPEESIEFSSNLTYLGKKGLLNTASGLQIAYL 111
Query: 124 SGRQSSEGQQFGTYSQDDVDALR-ALAEEPGI--VDLFLTNEWPSGVTNKAAASDMLVGI 180
SG + S + + + DV+ L L + G D+ LT+ WP+ + +
Sbjct: 112 SGVEGSS-KDLSCFDKADVEELLIPLGTQVGFSGTDILLTSVWPADIARHSHNQP----- 165
Query: 181 SDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLAPVGN 235
S +S+L A +KPRYH AG GV Y R+PY N A H TRF+GLA +GN
Sbjct: 166 SKPQPGSVLLSKLAAHLKPRYHFAGL-GVHYERQPYRNHRVLLEPARHTTRFIGLAAIGN 224
Query: 236 KEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVSDSQY 295
EKQK+++A + P M +++ + PN + PY L + +KE R + + +
Sbjct: 225 PEKQKWLYACNVKPMRKMEKEELTAQPPNASEFPYRELLEEIAAKETLSRMNGNGQRPEG 284
Query: 296 WRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKG 355
+Y + G G+G K RH+ + G
Sbjct: 285 SQYRFEMGGAEDGAGNGRK-------------------RHNDGGND-------------G 312
Query: 356 KCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCA 415
K P L N D+++ HL+V++G Y A
Sbjct: 313 PRNKQPVGPCWFCLSNVDAEK--------------------------HLVVAIGNKCYAA 346
Query: 416 LPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKR 475
+PKGPL EDHV+V+ V H+ + +S E E+ +F+++ + QGK V FE + R
Sbjct: 347 MPKGPLTEDHVMVLSVGHIQSQVSAPVEVRDEIEKFKSAFTLMANKQGKALVTFER-NFR 405
Query: 476 GTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFF 535
H +Q V I S + A++ F AA GF+ + + SL + C +F
Sbjct: 406 TQHLQVQMVMIDKSSSKALKSSFTTAAACAGFELVTMGPDE------SLLDMVNEGCPYF 459
Query: 536 YVELPEGTVLSHLIEENERFPAQFGREVLAG--LLNIADKADWRNCMLGKEEETKMVEDF 593
ELP+G+ L + FP FGREVLA +L+ DK DW+ C+L KE+E ++V
Sbjct: 460 VAELPDGSKL--FTRSMKGFPLHFGREVLASTPILDCEDKVDWKACVLAKEKEVELVNKL 517
Query: 594 KKRFEAFD 601
K F+ FD
Sbjct: 518 KSDFKPFD 525
>sp|Q8CI33|C19L1_MOUSE CWF19-like protein 1 OS=Mus musculus GN=Cwf19l1 PE=2 SV=2
Length = 537
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 282/618 (45%), Gaps = 109/618 (17%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RV+++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSAQDA--EWEEYKTGNKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ +AN DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIV 111
Query: 122 YLSGRQS-SEGQQFGTYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S E ++S DV +LR + A + VD+ LT+ WP V + +S
Sbjct: 112 YLSGTESLDEPVPAHSFSPKDVSSLRTMLCSASQFKGVDILLTSPWPKYVGSFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ N S +S L +KPRYH A + +Y R PY N A H TRF+ LA
Sbjct: 169 -GEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNHVVLQESAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M+ A++ + P+ T +PY D G + P+
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYR--DSGKQAAGGKHIPAPQEE 285
Query: 292 DSQYWRYDVSQK--RQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCL 349
+ + +D+S+K R++ G + C F
Sbjct: 286 SACQFFFDLSEKQGRKRPSTGRDTRPPHAKQPRKPPQPPGPCWF---------------- 329
Query: 350 DFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH-LIVS 407
C PE KH + N C+ L+ + + H LI+
Sbjct: 330 -------CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDHVLILP 366
Query: 408 VGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAV 467
+G Y +VE E EK ++ +L ++K++GK V
Sbjct: 367 IGHYQSVVELSAEVVE-------------------EVEK----YKATLQRFFKSRGKRCV 403
Query: 468 FFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLR 525
FE + R H LQ +P+P S A ++D F A++ + L + SD ++ +
Sbjct: 404 LFE-RNYRSHHLQLQVIPVPLSCCATDDIKDAFITQAQEQQIELLEI--PEHSDIKQIAQ 460
Query: 526 AQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADWRNCMLGK 583
++FYVEL G L H I++N FP QFGREVLA +LNI +KADWR C K
Sbjct: 461 P----GAAYFYVELDTGEKLFHRIKKN--FPLQFGREVLASEAILNIPEKADWRQCQTSK 514
Query: 584 EEETKMVEDFKKRFEAFD 601
+EE + F+K FE FD
Sbjct: 515 DEEEALARRFRKDFEPFD 532
>sp|Q69YN2|C19L1_HUMAN CWF19-like protein 1 OS=Homo sapiens GN=CWF19L1 PE=1 SV=2
Length = 538
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 280/616 (45%), Gaps = 104/616 (16%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSE 62
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF + + E+ Y G +
Sbjct: 5 PLRLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDA--EWEEYKTGIKK 62
Query: 63 IPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGLSVA 121
PI TY +G A ++ + DG ++ +N+ +L G FT GL +
Sbjct: 63 APIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIV 111
Query: 122 YLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAASDML 177
YLSG +S G ++S DV +LR + + VD+ LT+ WP V N +S
Sbjct: 112 YLSGTESLNEPVPGYSFSPKDVSSLRMMLCTTSQFKGVDILLTSPWPKCVGNFGNSS--- 168
Query: 178 VGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFLGLA 231
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+ LA
Sbjct: 169 -GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIALA 227
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSDSVS 291
VGN EK+K+++A S P M AA++ + P+ T +PY Q + + P + +
Sbjct: 228 NVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASIGKQILAPVEESA 287
Query: 292 DSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDF 351
++ + Q R++ G K S P H R+ F
Sbjct: 288 CQFFFDLNEKQGRKRSSTGRDSK---------SSP--------HPKQPRKPPQPPGPCWF 330
Query: 352 IIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSV-ESH-LIVSVG 409
C PE KH + N C+ L+ + + H LI+ +G
Sbjct: 331 -----CLASPEVE-KHLV---------------VNIGTHCYLALAKGGLSDDHVLILPIG 369
Query: 410 EYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFF 469
Y +VE+ VE T L RF +K++GK V F
Sbjct: 370 HYQSVVELSAEVVEE------VEKYKAT----------LRRF-------FKSRGKWCVVF 406
Query: 470 EWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQ 527
E + + H LQ +P+P S + ++D F A++ + L + SD ++ +
Sbjct: 407 E-RNYKSHHLQLQVIPVPISCSTTDDIKDAFITQAQEQQIELLEI--PEHSDIKQIAQP- 462
Query: 528 FDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--GLLNIADKADWRNCMLGKEE 585
++FYVEL G L H I++N FP QFGREVLA +LN+ DK+DWR C + KE+
Sbjct: 463 ---GAAYFYVELDTGEKLFHRIKKN--FPLQFGREVLASEAILNVPDKSDWRQCQISKED 517
Query: 586 ETKMVEDFKKRFEAFD 601
E + F+K FE +D
Sbjct: 518 EETLARRFRKDFEPYD 533
>sp|Q10414|MU161_SCHPO CWF19-like protein mug161 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=mug161 PE=1 SV=1
Length = 561
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 161/642 (25%), Positives = 263/642 (40%), Gaps = 130/642 (20%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
+ P +L+ G GR+ + + + ++K G F +C+G F + + +
Sbjct: 7 LKPADVLVIGSADGRVIEAIEYIADLHKQHG-FKFAICLGNLFSHKRTTSADVVKLKNEK 65
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNF-TLHGLS 119
++PIP YF GVG A + S M G +V NLF + G T + +
Sbjct: 66 VKVPIPVYF----GVGTAGL-----PESIISHMAMYGPEVAPNLFCMGICGFMKTFYKFT 116
Query: 120 VAYLSGRQSSEG-----QQF------GTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVT 168
+A L G + E ++F + + DV L D+ ++EWP V
Sbjct: 117 IAQLGGSYNEEKYYQPPEKFEQSLNEKCFHRSDVQKLSKRC------DILFSSEWPEDVQ 170
Query: 169 NKAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPYSNVDAVHV---- 224
+ + + ++ L A P+Y V+Y REPY N A++V
Sbjct: 171 ENSTLPERKL-----PKGCMPLAALAANCMPQYFFVPGP-VYYEREPYKNSAAINVNTGT 224
Query: 225 -TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAA 283
T F+ LAP N + +KF +A + P ++ + PN T SP+ H
Sbjct: 225 VTHFVALAPFKNSKNEKFSYAFTLYP---LTTEYMQPAPPNCTASPF------EHRPIPL 275
Query: 284 KRPS-DSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQ 342
KR S D + Q ++ S+ ++ N H +++
Sbjct: 276 KRASEDQIIPQQTNKFHKSKSSTA-------------LFKSKKDSSSSLNKMHKSES--- 319
Query: 343 CLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASA---NRSK----ECWFCL 395
HS N+ H+SE+ ++ RSK C+FCL
Sbjct: 320 ------------------------HSALNN----LHKSESGTSLNNRRSKVGPGSCFFCL 351
Query: 396 SSPSVESHLIVSVGEYYYCALPKGPLVED-----------HVLVIPVEHVPNTISTSPEC 444
S+P+V HLIV++G Y ALPKGPL HVL+IP+ H + +ST +
Sbjct: 352 SNPNVALHLIVAIGNEAYMALPKGPLTTTASNTPALASSGHVLIIPIAHA-SALSTLSDT 410
Query: 445 E-----KELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAAVQDIFN 499
E+ RF+ ++ Y +A+ +E G H + Q +PIP + ++ +F
Sbjct: 411 SYEKTLNEMNRFRKAVTDMYNACDSDALVYEISRANGVHLHWQMIPIPKISSHRIESVFL 470
Query: 500 LAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQF 559
A++ G+ F R + ++F V LP G +L H ++ ERF QF
Sbjct: 471 EMAKEAGYDF----------EERDVEPH---ELNYFRVFLPSGKILIHRLQLRERFDLQF 517
Query: 560 GREVLAGLLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFD 601
GR A +L + D+ DWR C+ ++EE E FK F+ +D
Sbjct: 518 GRRAAAKILGLEDRVDWRKCVQTEDEEKAESEAFKMCFKPYD 559
>sp|Q5R8R4|C19L1_PONAB CWF19-like protein 1 OS=Pongo abelii GN=CWF19L1 PE=2 SV=1
Length = 538
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 130/215 (60%), Gaps = 13/215 (6%)
Query: 391 CWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVPNTISTSPECEKELGR 450
CWFCL+SP VE HL+V++G + Y AL KG L +DHVL++P+ H + + S E +E+ +
Sbjct: 328 CWFCLASPEVEKHLVVNIGTHCYLALAKGGLSDDHVLILPIGHYQSVVELSAEVVEEVEK 387
Query: 451 FQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKAAA--VQDIFNLAAEKLGFK 508
++ +L ++K++GK V FE + + H LQ +P+P S A ++D F A++ +
Sbjct: 388 YKATLRRFFKSRGKRCVVFE-RNYKSHHLQLQVIPVPVSCCATDDIKDAFITQAQEQQIE 446
Query: 509 FLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA--G 566
L + SD ++ + ++FYVEL G L H I++N FP QFGREVLA
Sbjct: 447 LLEI--PEHSDIKQIAQP----GAAYFYVELDTGEKLFHRIKKN--FPLQFGREVLASEA 498
Query: 567 LLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFD 601
+LN+ DK+DWR C + KE+E + F+K FE +D
Sbjct: 499 ILNVPDKSDWRQCQISKEDEETLARCFRKDFEPYD 533
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/326 (33%), Positives = 163/326 (50%), Gaps = 34/326 (10%)
Query: 3 PPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFF---PDSSELLDEFMNYVEG 59
P R+L CGDV G+ + LF RVQ++ K +G FD +LCVG FF PD+ E+ Y G
Sbjct: 5 PLRLLTCGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTPDA-----EWEEYKTG 59
Query: 60 RSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFT-LHGL 118
+ PI TY +G A ++ + DG ++ +N+ +L G FT GL
Sbjct: 60 TKKAPIQTYVLG-----------ANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGL 108
Query: 119 SVAYLSGRQSSEGQQFG-TYSQDDVDALRAL---AEEPGIVDLFLTNEWPSGVTNKAAAS 174
+ YLSG +S G ++S DV +LR + + VD+ LT+ WP V N +S
Sbjct: 109 QIVYLSGTESLNEPVPGYSFSPKDVSSLRTMLCTTSQFKGVDILLTSPWPKYVGNFGNSS 168
Query: 175 DMLVGISDSSNTDST-VSELVAEIKPRYHIAGSKGVFYAREPYSN-----VDAVHVTRFL 228
G D+ S VS L +KPRYH A + +Y R PY N +A H TRF+
Sbjct: 169 ----GEVDTKKCGSALVSSLATGLKPRYHFAALEKTYYERLPYRNHIVLQENAQHATRFI 224
Query: 229 GLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAKRPSD 288
LA VGN EK+K+++A S P M AA++ + P+ T +PY Q + + + P +
Sbjct: 225 ALANVGNPEKKKYLYAFSIVPMKLMDAAELVKQPPDVTENPYRKSGQEASTGKQILAPVE 284
Query: 289 SVSDSQYWRYDVSQKRQKHGGGDGDK 314
+ ++ + Q R++ G K
Sbjct: 285 ESACQFFFDLNEKQGRKRSSTGRDSK 310
>sp|A1Z8J0|C19L1_DROME CWF19-like protein 1 homolog OS=Drosophila melanogaster GN=CG7741
PE=2 SV=1
Length = 545
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 161/330 (48%), Gaps = 52/330 (15%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEIP 64
+IL+ GDV GR QLF+RV+ VNK AGPF+ + CVG FF + + +E + Y G I
Sbjct: 27 KILVVGDVRGRFKQLFQRVEQVNKKAGPFEILCCVGDFFGEDKQ-NEELIAYKNGFKHIT 85
Query: 65 IPTYFIGDYGVGAAKVLLAASKNSANQGFK--MDGFKVTDNLFWLKGSGNFTL-HGLSVA 121
+PTY +G ++ + F+ DG ++ NL +L G +TL G+ +A
Sbjct: 86 VPTYILG------------PNQREHEKYFENLTDG-EICTNLTYLGRRGVYTLSSGVKIA 132
Query: 122 YLSGRQS-----SEGQQFGTYSQDDVDALR-------ALAEEPGIVDLFLTNEWPSGVTN 169
YLSG ++ S G + +++ DV A+R + E VD+ LT++WP G+
Sbjct: 133 YLSGLEAQGTADSAGSEH-EFTKADVIAVRNSCLVSKNCSTEYRGVDVLLTSQWPFGMQE 191
Query: 170 KAAASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGVFYAREPY-----SNVDAVHV 224
K A+ VS L EIKPRYH G Y P+
Sbjct: 192 KENAT-----------ASKLVSFLCREIKPRYHFCAINGTHYESAPFRMPKDETTQFELC 240
Query: 225 TRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYTFLDQGSHSKEAAK 284
TRF+ LA VGN EK K+I+ALS P D++ KT N P+ LD G A
Sbjct: 241 TRFISLAEVGNAEKAKYIYALSLKPVDKSRLLDLAQKTTNEIPCPFIGLDLG-----GAI 295
Query: 285 RPSDSVSDSQYWRYDVSQKRQKHGGGDGDK 314
+DS + QY+ YD+ R+K GGD +K
Sbjct: 296 GKNDSSENRQYF-YDMDGGRRKRQGGDNNK 324
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 13/232 (5%)
Query: 372 DDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVEDHVLVIPV 431
D+++R R + K CWFCLSSP VE HLI++VGE++Y AL KGP+ + HV+++
Sbjct: 321 DNNKRDKRPRIPQIEQDK-CWFCLSSPDVEKHLIITVGEHFYLALAKGPINKHHVMILST 379
Query: 432 EHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKA 491
+HVP SP+ KEL +F+ +L ++K G+ F E K H + A+ A
Sbjct: 380 KHVPCAAQLSPDDWKELNKFKAALRKFFKTLGQVVCFTERHYK-SVHLQINALAFEEGYA 438
Query: 492 AAVQDIFNLAAEKLGFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEE 551
++ F AE+ +F ++ + D + L +F ELP+ + L + +
Sbjct: 439 WKIKHSFEDKAEEFNLEF---ETLPALDSEKMLPEM----GPYFLAELPDDSTL--ITRQ 489
Query: 552 NERFPAQFGREVLA--GLLNIADKADWRNCMLGKEEETKMVEDFKKRFEAFD 601
+ FP F R+V LLN +K +W++C+L K+EE VEDF+K F FD
Sbjct: 490 MKHFPIHFARDVFCSENLLNCDEKVNWKDCLLDKDEEVAYVEDFRKAFAPFD 541
>sp|P53255|DRN1_YEAST CWF19-like protein DRN1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DRN1 PE=1 SV=1
Length = 507
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 22/233 (9%)
Query: 391 CWFCLSSPSVESHLIVSVGEYYYCALPKGPL--------VEDHVLVIPVEHVPNT-ISTS 441
C FC S+P++E H+I+S+G+ Y KGPL + H L+IP+EH+P S +
Sbjct: 269 CHFCFSNPNLEDHMIISIGKLVYLTTAKGPLSVPKGDMDISGHCLIIPIEHIPKLDPSKN 328
Query: 442 PECEKELGRFQNSLM-MYYKNQGKEAVFFEWLSKRGTHANLQAVPIPTSKA----AAVQD 496
E + + ++ SL+ M Y + FE S+R H + Q +P+P +A+
Sbjct: 329 AELTQSILAYEASLVKMNYIKFDMCTIVFEIQSERSIHFHKQVIPVPKYLVLKFCSALDR 388
Query: 497 IFNLAAEKLG----FKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEEN 552
+ EK +F S S + Q + F E PE +L N
Sbjct: 389 QVHFNNEKFTRNAKLEFQCYDSHSSKQYVDVINNQSNNYLQFTVYETPEADPKIYLATFN 448
Query: 553 --ERFPAQFGREVLAGLLNIADKADWRN--CMLGKEEETKMVEDFKKRFEAFD 601
E QFGR VLA LLN+ + W + C+ K++ET E F+K + +D
Sbjct: 449 ASETIDLQFGRRVLAFLLNLPRRVKWNSSTCLQTKQQETIEAEKFQKAYRTYD 501
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 78/308 (25%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQFFPDSSELLDEFMNYVEGR 60
M+ +IL+ ++ ++++ VN+ +GPFD ++ + ++ EL +
Sbjct: 1 MTNAKILVAHISESDADEAIRKIKKVNEKSGPFDLIIIFSNSYDENFELNTD-------- 52
Query: 61 SEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGSGNFTL-HGLS 119
G +++L + + N K K+ +N+ L G + L +G++
Sbjct: 53 ---------------GLPQLILLSCDKANNSKSK----KINENVTLLHNMGTYKLANGIT 93
Query: 120 VAY-------LSGRQSSEGQQFGTYSQDDVDALRALAEEPGIVDLFLTNEWPSGVTNKAA 172
++Y L G + S +FG S+D VD L LT EW ++ +
Sbjct: 94 LSYFIYPDDTLQGEKKSILDEFGK-SEDQVDIL-------------LTKEWGLSISERCG 139
Query: 173 ASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGV-FYAREPYSNVDAVHVTRFLGLA 231
L G V EL +++ RYH A S + FY EP+ + ++RFL +
Sbjct: 140 R---LSG-------SEVVDELAKKLQARYHFAFSDEINFYELEPFQ-WERERLSRFLNIP 188
Query: 232 PVGNKEKQKFIHALSPTPAATMSAADISMKT----PNTTLSPYTFLDQGSHSKEAAKRPS 287
G+ +K + A M D +K PN +PY + S+ KRP
Sbjct: 189 KYGSGKKWAY--------AFNMPIGDNELKDEPEPPNLIANPYNSVVTNSN-----KRPL 235
Query: 288 DSVSDSQY 295
++ +++ +
Sbjct: 236 ETETENSF 243
>sp|Q10946|C19L2_CAEEL CWF19-like protein 2 homolog OS=Caenorhabditis elegans
GN=B0361.2/B0361.1 PE=2 SV=2
Length = 460
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 10/217 (4%)
Query: 390 ECWFCLSSPSVESHLIVSVGEYYYCALPKGPLVED-HVLVIPVEHVPNTISTSPECEKEL 448
+C C+ S ++ H I++VG Y A+ + ++D H++++P +H +TI E+
Sbjct: 238 DCSRCIDSSRLKKHNIIAVGINTYLAVVEWDGLDDEHLIIVPTQHCSSTIQLDENVWDEM 297
Query: 449 GRFQNSLMMYYKNQGKEAVFFEWLSKR---GTHANLQAVPIPTSKAAAVQDIFNLAAEKL 505
++ L+ +K+Q ++ +FFE +S+ H ++ VP+ F A +
Sbjct: 298 RLWRKGLVAVWKSQNRDCIFFE-MSRHVDSNPHVFIECVPVEQEIGDMASIYFKKAINEC 356
Query: 506 GFKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLA 565
+++ K + + LR Q + S+F V+ +H+IE ++ FP+ F E++A
Sbjct: 357 EGEYMDNKKLIET---KDLRRQIPKGFSYFAVDFGLSNGFAHVIESHDHFPSTFATEIIA 413
Query: 566 GLLNIADKADWRNCMLGKEEETK-MVEDFKKRFEAFD 601
G+L++ K WR + + K E+FKK +E D
Sbjct: 414 GMLDLPPKK-WRKRETDEMSKQKSRAENFKKLWEPVD 449
>sp|Q9VXT5|C19L2_DROME CWF19-like protein 2 homolog OS=Drosophila melanogaster GN=CG9213
PE=1 SV=2
Length = 687
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 391 CWFCLSSPSVESHLIVSVGEYYYCALP-KGPLVEDHVLVIPVEHVPNTISTSPECEKELG 449
C C S ++ L+VS+G+ Y +LP L H ++ ++HVP + +E+
Sbjct: 473 CERCFDSAKLDKQLLVSLGDKIYLSLPWYMGLQSGHCILTTLQHVPCCTQLDEDAWEEIS 532
Query: 450 RFQNSLMMYYKNQGKEAVFFEWLSK--RGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGF 507
F+ +L + + ++ VF+E +K R H ++ +PIP S+ F A E+
Sbjct: 533 NFRKALTRMFAARRQDVVFYEIANKLHRRPHLSVHCIPIPASQGEMAPFYFKKAIEESEQ 592
Query: 508 KFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLAGL 567
++ K S ++SLRA + + +V + +H+IE+ +RFPA F +E+L G+
Sbjct: 593 EWCINKQLVSL-RQKSLRAAIPKGLPYVWVHFGMDSGFAHVIEDEDRFPANFAQEILGGM 651
Query: 568 LNIADKADWR 577
L + A WR
Sbjct: 652 LELNPNA-WR 660
>sp|Q3LSS0|C19L2_DANRE CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1
Length = 960
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 8/222 (3%)
Query: 385 ANRSKECWFCLSSPSVESHLIVSVGEYYYCALPKG-PLVEDHVLVIPVEHVPNTISTSPE 443
A R ++C C S + HLI++VG Y LP L E H L++PV+H +
Sbjct: 736 AGRMEKCPHCFDSAELPKHLIIAVGTKVYLCLPNSVSLTEGHCLIVPVQHHTAATGLDED 795
Query: 444 CEKELGRFQNSLMMYYKNQGKEAVFFE--WLSKRGTHANLQAVPIPTSKAAAVQDIFNLA 501
E+ F+ +L+ +++Q + VF E KR H + VP+P F A
Sbjct: 796 IWGEIQMFRRALVRMFESQELDCVFLETHMNPKRHLHMVYECVPMPRELGDMAPIYFKKA 855
Query: 502 AEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFG 560
+ ++ K K D +R +R R +F V+ +H+IE ++FP FG
Sbjct: 856 IMESDEEWAMNK--KVVDLSKRDIRQAVPRGLPYFSVDFGLQGGFAHVIENEQKFPHYFG 913
Query: 561 REVLAGLLNIADKADWRNCMLGK-EEETKMVEDFKKRFEAFD 601
+E+L G+L++ + WR + +++ K V F + ++ FD
Sbjct: 914 KEILGGMLDLEPRR-WRKPIRENFDDQRKKVLKFAQWWKPFD 954
>sp|Q28C44|C19L2_XENTR CWF19-like protein 2 OS=Xenopus tropicalis GN=cwf19l2 PE=2 SV=1
Length = 922
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 348 CLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVS 407
LD + K K + + + HRS A+ + C FC + + HLIV+
Sbjct: 666 TLDDMFVTKAAKKEHTDKEEERERMQAMHEHRSLTATMEK---CRFCFDNAELPKHLIVA 722
Query: 408 VGEYYYCALPKG-PLVEDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEA 466
+G Y LP L E H L++P++H + + E+ F+ +L+ ++++G +
Sbjct: 723 IGTKVYLCLPNHLSLTEGHCLIVPLQHHTASTLLDEDIYNEIQVFRKALVRMFESKGLDC 782
Query: 467 VFFE--WLSKRGTHANLQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSD-GRRS 523
VF E +++ H + +P+P F A + ++ K K D +
Sbjct: 783 VFLESNIYARKRLHLVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMNK--KLIDLSTKD 840
Query: 524 LRAQFDRNCSFFYVELPEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWRNCMLGK 583
+R + +F V+ +H+IE+ +FP+ FG+E++ G+L++ + WR + +
Sbjct: 841 IRRAVPKGLPYFSVDFGLQGGYAHVIEDEHKFPSYFGKEIIGGMLDLEPRI-WRKAVRER 899
Query: 584 -EEETKMVEDFKKRFEAFD 601
E++ K V +F + ++ FD
Sbjct: 900 FEDQRKKVLEFAQWWKPFD 918
>sp|Q2TBE0|C19L2_HUMAN CWF19-like protein 2 OS=Homo sapiens GN=CWF19L2 PE=1 SV=4
Length = 894
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 10/204 (4%)
Query: 378 HRSENASANRSKECWFCLSSPSVESHLIVSVGEYYYCALPK-GPLVEDHVLVIPVEHVPN 436
HRS A + C +C S HLIV++G Y LP L E H L++P++H
Sbjct: 665 HRSLAAQMEK---CLYCFDSSQFPKHLIVAIGVKVYLCLPNVRSLTEGHCLIVPLQHHRA 721
Query: 437 TISTSPECEKELGRFQNSLMMYYKNQGKEAVFFE--WLSKRGTHANLQAVPIPTSKAAAV 494
+ +E+ F+ SL+ ++++G + +F E K+ H + +P+P
Sbjct: 722 ATLLDEDIWEEIQMFRKSLVKMFEDKGLDCIFLETNMSMKKQYHMVYECIPLPKEVGDMA 781
Query: 495 QDIFNLAAEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENE 553
F A + ++ K K D + +R R +F V+ +H+IE+
Sbjct: 782 PIYFKKAIMESDEEWSMNK--KLIDLSSKDIRKSVPRGLPYFSVDFGLHGGFAHVIEDQH 839
Query: 554 RFPAQFGREVLAGLLNIADKADWR 577
+FP FG+E++ G+L+I + WR
Sbjct: 840 KFPHYFGKEIIGGMLDIEPRL-WR 862
>sp|Q8BG79|C19L2_MOUSE CWF19-like protein 2 OS=Mus musculus GN=Cwf19l2 PE=2 SV=1
Length = 887
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 366 KHSLQNDDSQRTHR-SENAS-ANRSKECWFCLSSPSVESHLIVSVGEYYYCALPK-GPLV 422
+H + ++SQR +E+ S A + +C +C S HLIV++G Y LP L
Sbjct: 641 EHLGKKEESQRRRAIAEHQSLAAKMAKCLYCFDSSQFPKHLIVAIGVKVYLCLPSFQSLT 700
Query: 423 EDHVLVIPVEHVPNTISTSPECEKELGRFQNSLMMYYKNQGKEAVFFEWLS--KRGTHAN 480
E H ++P++H + +E+ F+ SL+ ++++ + +F E K+ H
Sbjct: 701 EGHCFIVPLQHHQAATVLDEDVWEEIQMFRKSLVKMFEDKELDCIFLETNMGLKKHYHMV 760
Query: 481 LQAVPIPTSKAAAVQDIFNLAAEKLGFKFLATKSSKSSD-GRRSLRAQFDRNCSFFYVEL 539
+ +P+P F A + ++ K K D + +R R +F V+
Sbjct: 761 YECIPLPKEVGDMAPIYFKKAIMESDEEWSMNK--KLIDLSSKDIRKSVPRGLPYFAVDF 818
Query: 540 PEGTVLSHLIEENERFPAQFGREVLAGLLNIADKADWR 577
+H+IE+ RFP FG+E++ G+L++ + WR
Sbjct: 819 GLQGGFAHIIEDQYRFPHYFGKEIIGGMLDLEPRL-WR 855
>sp|O13765|DBR1_SCHPO Lariat debranching enzyme OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=dbr1 PE=3 SV=2
Length = 478
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 47/233 (20%)
Query: 5 RILLCGDVLGRLNQLF----KRVQSVNKSAGPFDAVLCVGQF----FPDSSELLDEFMNY 56
R+ + G G L+ L+ KR + G F A+ V + P + L +F NY
Sbjct: 17 RVGVQGCCHGILDNLYILAEKRKVDLLIIGGDFQALRNVSDYHGISMPPKFKRLGDFFNY 76
Query: 57 VEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTDNLFWLKGSGNFTL 115
GR++ PI T F+G + ++N ++ G V N++++ S +
Sbjct: 77 YNGRNKAPILTIFVG------------GNHEASNYLDELPYGGWVAPNIYYMGRSSVINV 124
Query: 116 HGLSVAYLSGRQSSEGQQFGTYS----------------QDDVDALRALAEEPGIVDLFL 159
GL +A +SG S+ + G Y + DV +L++L + +D+FL
Sbjct: 125 GGLRIAGISGIYSAMDYKKGRYEGLPYNYKMLKSIYHTREFDVLSLKSLQKP---IDIFL 181
Query: 160 TNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAG 205
+++WP G+ + +L + + + EL+ E+KPRY +A
Sbjct: 182 SHDWPRGIEQHGDVAKLLRHKPFFRNEVERNDLGSPALEELLVELKPRYWMAA 234
>sp|P24309|DBR1_YEAST Lariat debranching enzyme OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=DBR1 PE=1 SV=1
Length = 405
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 93/241 (38%), Gaps = 39/241 (16%)
Query: 1 MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDAVLCVGQF-------------FPDSS 47
M+ RI + G G+LNQ++K V ++ + P D ++ +G F P
Sbjct: 1 MTKLRIAVQGCCHGQLNQIYKEVSRIH-AKTPIDLLIILGDFQSIRDGQDFKSIAIPPKY 59
Query: 48 ELLDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWL 107
+ L +F++Y E P+PT FIG ++L + G+ N+ W
Sbjct: 60 QRLGDFISYYNNEIEAPVPTIFIGGNHESMRHLMLLPHGGYVAKNIFYMGYS---NVIWF 116
Query: 108 KGSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQ------------DDVDALRALAEEPGIV 155
KG +L G+ + +Q + + D+ L + +
Sbjct: 117 KGIRIGSLSGIWKEWDFNKQRPDWNDLENNNWKANIRNLYHVRISDIAPLFMIKHR---I 173
Query: 156 DLFLTNEWPSGVTNKAAASDML-------VGISDSSNTDSTVSELVAEIKPRYHIAGSKG 208
D+ L+++WP+GV +L I + +L+ +++P++ ++
Sbjct: 174 DIMLSHDWPNGVVYHGDTKHLLKLKPFFEQDIKEGKLGSPVTWQLLRDLRPQWWLSAHLH 233
Query: 209 V 209
V
Sbjct: 234 V 234
>sp|Q09909|CWF19_SCHPO Pre-mRNA-splicing factor cwf19 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf19 PE=1 SV=1
Length = 639
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 22/227 (9%)
Query: 391 CWFCLSSPSVESHLIVSVGEYYYCALPKGP-LVEDHVLVIPVEHVPNTISTSPECEKELG 449
C CL+ + ++S+ Y +LP P L + H L++P H NT+S + E+
Sbjct: 412 CPLCLNYETQPLAPVISLSHRAYVSLPTQPELAKYHCLIVPTGHRINTLSCDEDEWDEIR 471
Query: 450 RFQNSLMMYYKNQGKEAVFFEWL--SKRGTHANLQAVPIPTS----KAAAVQDIFNLAAE 503
F + + + + +F+E +R H ++ +P+ A ++ + + E
Sbjct: 472 NFMKCIALMFDSMNLGVIFYENAPSPQRYMHTAIECIPVSKRILSLAPAYFREALSTSDE 531
Query: 504 KLG--FKFLATKSSKSSDGRRSLRAQFDRNCSFFYVELPEGTVLSHLIEENERFPA--QF 559
+ K + T G+ + R + +F+V H++E+ + + Q
Sbjct: 532 EWSQHRKIIDTLEGSKKYGKWAFRKMMVKELGYFHVWFSIDGGYGHVVEDEKAWGRHDQV 591
Query: 560 GREVLAGLLN-----IADKADWRNCMLGKEEETKMVEDFKKRFEAFD 601
R+V A +LN I K W GK++ + + F+ RFE FD
Sbjct: 592 PRQVFASMLNLPPEVIRRKGSW----TGKKDPREDM--FRSRFEKFD 632
>sp|Q61D44|DBR1_CAEBR Lariat debranching enzyme OS=Caenorhabditis briggsae GN=dbr-1 PE=3
SV=1
Length = 511
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 113/287 (39%), Gaps = 60/287 (20%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAG-PFDAVLCVGQF-------------FPDSSELL 50
+I + G G ++ +++ + + + G FD ++C G + P L
Sbjct: 46 KIAVVGCSHGEMDAIYETMALIEEKKGYKFDLLICCGDYQAVRNHGDLPHMSIPPKYRSL 105
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110
F Y G + P+ T FIG G A L N G V N+F++ +
Sbjct: 106 QTFYKYYSGEKKAPVLTLFIG--GNHEASGFLCELPN---------GGWVAPNIFYMGFA 154
Query: 111 GNFTLHGLSVAYLSGRQSSEGQQFGTYSQD----------------DVDALRALA----- 149
GL +A LSG S +F Y + D+ LR L
Sbjct: 155 NCIQFAGLRIAGLSGIYSHGDVEFSHYERPAFAERDVKSAYHVRNVDMFRLRQLKAANND 214
Query: 150 EEPGIVDLFLTNEWPSGVTNKAAAS------DMLVGISDSSNT-DSTVSELVAEIKPRYH 202
+ +D+ L+++WP G+ + ++ D+ S + + +L+ + +PRY+
Sbjct: 215 KLSNPIDIMLSHDWPGGIPDFGDSAWLFKKKDLFEADHKSGKLGNPALMKLIYDCRPRYY 274
Query: 203 IAGSKGV-FYAREPY--SNVDAVHVTRFLGL-APVGNKEKQKFIHAL 245
+A + F A P+ S + TRFL L P+ ++ F+ AL
Sbjct: 275 LAAHLHIKFAALVPHKGSGSERPQPTRFLSLDKPIPGRQ---FMQAL 318
>sp|Q6GPB8|DBR1A_XENLA Lariat debranching enzyme A OS=Xenopus laevis GN=dbr1-a PE=2 SV=1
Length = 534
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 52/265 (19%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGP-FDAVLCVGQF-------------FPDSSELL 50
+I + G G L+++++ +Q + K D +LC G F P +
Sbjct: 2 KIAVEGCCHGELDKIYETIQFLEKKENTKVDLLLCCGDFQAVRNEGDMKCMAVPMKYRQM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110
F Y G + PI T FIG G A L Q G+ V N++++ +
Sbjct: 62 QTFYKYYSGEKKAPILTIFIG--GNHEASNYL--------QELPYGGW-VAPNIYYMGYA 110
Query: 111 GNFTLHGLSVAYLSGRQSSEGQQFG-----TYSQDDVDA---LRALA-------EEPGIV 155
G G+ + +SG S + G YS+D V + +R++ +EP +
Sbjct: 111 GVVKYRGVRIGGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRSIEVFKLKQLKEP--M 168
Query: 156 DLFLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKG 208
D+FL+++WP + + +L + D++ SEL+ I+P Y +
Sbjct: 169 DIFLSHDWPRSIYHYGNKKQLLKKKDFFRQEVEDNTLGSPAASELLLHIQPSYWFSAHLH 228
Query: 209 VFYA--REPYSNVDAV-HVTRFLGL 230
V +A + +NV + T+FL L
Sbjct: 229 VKFAAFMQHQNNVGEIPKATKFLAL 253
>sp|Q966M6|DBR1_CAEEL Lariat debranching enzyme OS=Caenorhabditis elegans GN=dbr-1 PE=3
SV=2
Length = 500
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 112/287 (39%), Gaps = 60/287 (20%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAG-PFDAVLCVGQF-------------FPDSSELL 50
RI + G G ++ +++ + + + G FD ++C G + P L
Sbjct: 42 RIAVVGCSHGEMDAIYETMTLIEQKNGYKFDLLICCGDYQAVRNYGDLPHMSIPPKYRSL 101
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110
F Y G + P+ T FIG G A L N G V N++++ +
Sbjct: 102 QTFYKYYSGEQKAPVLTLFIG--GNHEASGYLCELPN---------GGWVAPNIYYMGFA 150
Query: 111 GNFTLHGLSVAYLSGRQSSEGQQFGTY-----SQDDVDA-----------LRALAEE--- 151
L +A LSG S QF Y S+ DV + LR L +
Sbjct: 151 NCIRFANLRIAGLSGIFSQGDFQFSHYERPSFSERDVKSAYHVRNVDMFRLRQLKSDNEN 210
Query: 152 --PGIVDLFLTNEWPSGVTNKA------AASDMLVGISDSSNT-DSTVSELVAEIKPRYH 202
+D+ L+++WP G+ + D+ +S + + +L+ + +PRY+
Sbjct: 211 KISNPIDIMLSHDWPGGIPDFGDKEWLFRKKDLFEADHNSGKLGNPSGMKLIYDCRPRYY 270
Query: 203 IAGSKGV-FYAREPY--SNVDAVHVTRFLGL-APVGNKEKQKFIHAL 245
+A + F A P+ S TRFL L P+ + KF+ AL
Sbjct: 271 LAAHLHIAFAALVPHKGSGSGRPQPTRFLSLDKPIPGR---KFMQAL 314
>sp|Q94K01|DBR1_ARATH Lariat debranching enzyme OS=Arabidopsis thaliana GN=DBR1 PE=2 SV=1
Length = 418
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 106/265 (40%), Gaps = 56/265 (21%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGP-FDAVLCVGQF-------------FPDSSELL 50
+I + G + G L+ ++K +Q + D +LC G F P +
Sbjct: 2 KIAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYREM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKM--DGFKVTDNLFWLK 108
F Y G+ PIPT FIG + ++N +++ G+ T N+++L
Sbjct: 62 KSFWKYYSGQEVAPIPTIFIG------------GNHEASNYLWELYYGGWAAT-NIYFLG 108
Query: 109 GSGNFTLHGLSVAYLSGRQSSEGQQFGTYSQD----------------DVDALRALAEEP 152
+G + + LSG + + G + + DV L L EEP
Sbjct: 109 FAGVVKFGNVRIGGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQL-EEP 167
Query: 153 GIVDLFLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAG 205
+D+FL+++WP G+T+ + ++ I + + + L+ ++KP+Y +
Sbjct: 168 --LDIFLSHDWPVGITDYGDSESLMRQKPYFRQEIEEKTLGSKPAALLLEKLKPQYWFSA 225
Query: 206 SKGVFYAREPYSNVDAVHVTRFLGL 230
+A D VT+FL L
Sbjct: 226 HLHCKFAAAVQHGNDG-SVTKFLAL 249
>sp|Q7T3E4|DBR1_DANRE Lariat debranching enzyme OS=Danio rerio GN=dbr1 PE=1 SV=1
Length = 568
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 52/265 (19%)
Query: 5 RILLCGDVLGRLNQLFKRVQSV-NKSAGPFDAVLCVGQF-------------FPDSSELL 50
++ + G G L+++++ + + NK D +LC G F P +
Sbjct: 2 KVAVEGCCHGELDKIYESISYLENKDGVKVDLLLCCGDFQAVRNEGDMKCMAVPAKYRHM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTDNLFWLKG 109
F Y G + P+ T FIG + ++N ++ G V N+++L
Sbjct: 62 QTFYKYYSGEKKAPVLTIFIG------------GNHEASNHLQELPYGGWVAPNIYYLGY 109
Query: 110 SGNFTLHGLSVAYLSGRQSSEGQQFG--------------TYSQDDVDALRALAEEPGIV 155
+G G+ + LSG S + G Y ++D + L + +
Sbjct: 110 AGVIRYKGVRIGGLSGIFKSHDFKKGHFEFPPYNPETLRSVYHIRNIDVFK-LKQIKMPI 168
Query: 156 DLFLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKG 208
D+F+T++WP G+ + + +L + S+ ++L+ ++P Y +
Sbjct: 169 DIFMTHDWPRGIYHYGNTNALLRQKKFLRQEVESSTLGSPAAADLLEHLQPSYWFSAHLH 228
Query: 209 VFYA---REPYSNVDAVHVTRFLGL 230
V +A + N A +T+FL L
Sbjct: 229 VKFAALMQHEAKNNTAPKITKFLSL 253
>sp|Q29FE1|DBR1_DROPS Lariat debranching enzyme OS=Drosophila pseudoobscura pseudoobscura
GN=DBR1 PE=3 SV=2
Length = 537
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 40/246 (16%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNK-SAGPFDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
+I + G G L +++ + + K S D +LC G F S+ L++ + +
Sbjct: 2 KIAIEGCAHGELERIYDTIACIEKESNTKIDLLLCCGDF--QSTRNLEDLQTMAVPKKYL 59
Query: 64 PIPT---YFIGDYGVGAAKVLLAASKNSAN--QGFKMDGFKVTDNLFWLKGSGNFTLHGL 118
I T Y+ G+ + + + ++N Q G+ V N+++L +G ++G+
Sbjct: 60 DICTFYKYYSGECVAPVLTIFIGGNHEASNYLQELPYGGW-VAPNIYYLGYAGVVNVNGV 118
Query: 119 SVAYLSGRQSSEG-----QQFGTYSQD---------DVDALRALAEEPGIVDLFLTNEWP 164
+A +SG +F Y++ ++ R L + G +D+FL+++WP
Sbjct: 119 RIAGISGIYKGHDFLRGHHEFPPYTESTCRSVYHVRQLEVFR-LKQLSGKIDIFLSHDWP 177
Query: 165 SGVT---NKAA--------ASDMLVGISDSSNTDSTVSELVAEIKPRYHIAGSKGV-FYA 212
+G+ NKA A+DM G S + EL+ ++P Y A F A
Sbjct: 178 TGIYEYGNKAQLLRKKPYFAADMESGQLGS----RPLEELLKAVQPSYWFAAHLHCKFAA 233
Query: 213 REPYSN 218
P+ N
Sbjct: 234 LVPHQN 239
>sp|Q7ZWU9|DBR1B_XENLA Lariat debranching enzyme B OS=Xenopus laevis GN=dbr1-b PE=2 SV=1
Length = 533
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 53/266 (19%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGP-FDAVLCVGQF-------------FPDSSELL 50
+I + G G L+++++ +Q + K + +LC G F P +
Sbjct: 2 KIAVEGCCHGELDKIYETIQFLEKKENTKVELLLCCGDFQAVRNEGDMKCMAVPVKYRQM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110
F Y G + PI T FIG G A L Q G+ V N++++ +
Sbjct: 62 QTFYKYYSGEKKAPILTIFIG--GNHEASNYL--------QELPYGGW-VAPNIYYMGYA 110
Query: 111 GNFTLHGLSVAYLSGRQSSEGQQFG-----TYSQDDVDA---LRALA-------EEPGIV 155
G G+ + +SG S + G Y +D V + +R++ +EP +
Sbjct: 111 GVVKYRGVRIGGISGIFKSHDYRKGHFERLPYGKDTVRSAYHVRSIEVFKLKQLKEP--M 168
Query: 156 DLFLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKG 208
D+FL+++WP + + +L + D++ SEL+ I+P Y +
Sbjct: 169 DIFLSHDWPRSIYHYGNKKQLLKKKDFFRQEVEDNTLGSPAASELLLHIQPSYWFSAHLH 228
Query: 209 VFYA--REPYSNVDAV--HVTRFLGL 230
V +A + +NVD T+FL L
Sbjct: 229 VKFAAFMQHQTNVDGEIPKATKFLAL 254
>sp|Q9UK59|DBR1_HUMAN Lariat debranching enzyme OS=Homo sapiens GN=DBR1 PE=1 SV=2
Length = 544
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 102/265 (38%), Gaps = 51/265 (19%)
Query: 5 RILLCGDVLGRLNQLFKRVQ-SVNKSAGPFDAVLCVGQF-------------FPDSSELL 50
R+ + G G L+++++ + + + GP D +LC G F P +
Sbjct: 2 RVAVAGCCHGELDKIYETLALAERRGPGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRHM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTDNLFWLKG 109
F Y G + P+ T FIG + ++N ++ G V N+++L
Sbjct: 62 QTFYRYYSGEKKAPVLTLFIG------------GNHEASNHLQELPYGGWVAPNIYYLGL 109
Query: 110 SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDA--LRALAEEPGI-----------VD 156
+G G+ + +SG S + G + ++ +R++ I +D
Sbjct: 110 AGVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPID 169
Query: 157 LFLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKGV 209
+FL+++WP + + +L + +++ SEL+ +KP Y + V
Sbjct: 170 IFLSHDWPRSIYHYGNKKQLLKTKSFFRQEVENNTLGSPAASELLEHLKPTYWFSAHLHV 229
Query: 210 FYA----REPYSNVDAVHVTRFLGL 230
+A + T+FL L
Sbjct: 230 KFAALMQHQAKDKGQTARATKFLAL 254
>sp|Q9VSD7|DBR1_DROME Lariat debranching enzyme OS=Drosophila melanogaster GN=ldbr PE=1
SV=1
Length = 534
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGP-FDAVLCVGQFFPDSSELLDEFMNYVEGRSEI 63
+I + G G L +++ ++ + K G D +LC G F S+ L++ + +
Sbjct: 2 KIAVEGCAHGELERIYDTIEGIEKVGGTKIDLLLCCGDF--QSTRNLEDLQTMAVPKKYL 59
Query: 64 PIPT---YFIGDYGVGAAKVLLAASKNSAN--QGFKMDGFKVTDNLFWLKGSGNFTLHGL 118
+ + Y+ G+ + + + ++N Q G+ V N+++L +G ++G+
Sbjct: 60 DMCSFYKYYSGELVAPVLTIFIGGNHEASNYLQELPYGGW-VAPNIYYLGYAGVVNVNGV 118
Query: 119 SVAYLSG--------RQSSEGQQF------GTYSQDDVDALRALAEEPGIVDLFLTNEWP 164
+A +SG R E + Y ++ R L + G VD+FL+++WP
Sbjct: 119 RIAGISGIFKGHDFLRGHHEFPPYTDSTCRSVYHVRQLEVFR-LKQISGRVDIFLSHDWP 177
Query: 165 SGVT---NKAA--------ASDMLVGISDSSNTDSTVSELVAEIKPRYHIAG 205
+G+ NKA A+DM G S + EL+ ++P Y A
Sbjct: 178 TGIYEYGNKAQLLRKKPFFAADMESGKLGS----QPLEELLKAVQPAYWFAA 225
>sp|Q6P886|DBR1_XENTR Lariat debranching enzyme OS=Xenopus tropicalis GN=dbr1 PE=2 SV=1
Length = 534
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 55/267 (20%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAGP-FDAVLCVGQF-------------FPDSSELL 50
+I + G G L+++++ +Q + K D +LC G F P +
Sbjct: 2 KIAVEGCCHGELDKIYETIQFLEKKENTKVDLLLCCGDFQAVRNEGDMKCMAVPQKYRQM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110
F Y G PI T FIG G A L Q G+ V N++++ +
Sbjct: 62 QTFYKYYSGEKLAPILTIFIG--GNHEASNYL--------QELPYGGW-VAPNIYYVGYA 110
Query: 111 GNFTLHGLSVAYLSGRQSSEGQQFG-----TYSQDDVDA-----------LRALAEEPGI 154
G G+ + +SG S + G YS+D V + L+ L E
Sbjct: 111 GVVKYRGVRIGGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRNIEVFRLKQLKEP--- 167
Query: 155 VDLFLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSK 207
+D+F++++WP + + +L + +++ SEL+ I+P Y +
Sbjct: 168 MDIFMSHDWPRSIYHYGNKKQLLKKKDFFRQEVENNTLGSPAASELLLHIQPSYWFSAHL 227
Query: 208 GVFYA--REPYSNVDA--VHVTRFLGL 230
V +A + +NV+ T+FL L
Sbjct: 228 HVKFAAFMQHQTNVEGEIPKATKFLAL 254
>sp|Q923B1|DBR1_MOUSE Lariat debranching enzyme OS=Mus musculus GN=Dbr1 PE=1 SV=2
Length = 550
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 45/242 (18%)
Query: 5 RILLCGDVLGRLNQLFKRVQ-SVNKSAGPFDAVLCVGQF-------------FPDSSELL 50
R+ + G G L+++++ + + + +GP D +LC G F P +
Sbjct: 2 RVAVAGCCHGELDKIYETLALAERRGSGPVDLLLCCGDFQAVRNEADLRCMAVPPKYRHM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKGS 110
F Y G + P+ T FIG G A L Q G+ V N+++L +
Sbjct: 62 QTFYRYYSGEKKAPVLTIFIG--GNHEASNHL--------QELPYGGW-VAPNIYYLGLA 110
Query: 111 GNFTLHGLSVAYLSGRQSSEGQQFGTYSQDDVDA--LRALAEEPGI-----------VDL 157
G G+ + +SG S + G + ++ +R++ I V +
Sbjct: 111 GVVKYRGVRIGGISGIFKSHDYRKGHFECPPYNSSTIRSIYHVRNIEVYKLKQLKQPVHI 170
Query: 158 FLTNEWPSGVTNKAAASDMLVG-------ISDSSNTDSTVSELVAEIKPRYHIAGSKGVF 210
FL+++WP + + +L + +S+ SEL+ ++P Y + V
Sbjct: 171 FLSHDWPRNIYHYGNKKQLLKTKSFFRQEVENSTLGSPAASELLEHLQPAYWFSAHLHVK 230
Query: 211 YA 212
+A
Sbjct: 231 FA 232
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 318 KFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRT 377
KF +G+C GE C F H + R +C + +KG C+ GP+C+ H+L + +
Sbjct: 48 KFFRNGTCTAGENCPFSHSLETE----RPIC-KYFLKGNCKFGPKCALSHALPGNTNLPN 102
Query: 378 HRSENASA 385
S N A
Sbjct: 103 GTSTNTMA 110
>sp|Q5ZLM2|DBR1_CHICK Lariat debranching enzyme OS=Gallus gallus GN=DBR1 PE=2 SV=1
Length = 536
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 103/265 (38%), Gaps = 51/265 (19%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNK--SAGPFDAVLCVGQF-------------FPDSSEL 49
++ + G G L+++++ ++ + + + P D +LC G F P
Sbjct: 2 KVAVAGCCHGALDKMYETLELLQRRHNVRP-DLLLCCGDFQAVRNEADLRCMAVPAKYRH 60
Query: 50 LDEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMDGFKVTDNLFWLKG 109
+ F Y G + P+ T FIG G A L Q G+ V N+++L
Sbjct: 61 MQTFYRYYSGEKKAPVLTVFIG--GNHEASNHL--------QELPYGGW-VAPNIYYLGY 109
Query: 110 SGNFTLHGLSVAYLSGRQSSEGQQFG-----TYSQDDVDA--------LRALAEEPGIVD 156
+G G+ + +SG S + G Y+Q + + + L + +D
Sbjct: 110 AGVVRFRGVRIGGISGIFKSHDYRKGHFECPPYNQQTIRSAYHVRNIEVFKLKQLKHPMD 169
Query: 157 LFLTNEWPSGVTNKAAASDMLVGIS-----DSSNT--DSTVSELVAEIKPRY----HIAG 205
+F++++WP + + +L S SNT SEL+ +KP Y H+
Sbjct: 170 IFMSHDWPQSIYHYGNKKQLLKMKSFFRQEVESNTLGSPAASELLQHLKPNYWFSAHLHV 229
Query: 206 SKGVFYAREPYSNVDAVHVTRFLGL 230
F E S + T+FL L
Sbjct: 230 KFAAFMQHETKSKEELPKATKFLAL 254
>sp|Q6AU07|DBR1_ORYSJ Lariat debranching enzyme OS=Oryza sativa subsp. japonica GN=DBR1
PE=2 SV=1
Length = 407
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 81/194 (41%), Gaps = 44/194 (22%)
Query: 5 RILLCGDVLGRLNQLFKRVQSVNKSAG-PFDAVLCVGQFFPDSSE-------------LL 50
+I + G + G L++++ ++ + K+ G D +LC G F +E +
Sbjct: 2 KIAVEGCMHGELDKVYDTLRELEKAEGVKIDLLLCCGDFQAVRNENDLQCLNVKPRFREM 61
Query: 51 DEFMNYVEGRSEIPIPTYFIGDYGVGAAKVLLAASKNSANQGFKMD-GFKVTDNLFWLKG 109
F Y G++ P PT FIG + ++N +++ G N+++L
Sbjct: 62 KSFWKYYSGQAVAPYPTIFIG------------GNHEASNYLWELYYGGWAAPNIYFLGF 109
Query: 110 SGNFTLHGLSVAYLSGRQSSEGQQFGTYSQD--------------DVDALRAL-AEEPGI 154
+G + + LSG + G Y + D L+ + +EP
Sbjct: 110 AGVVKFGNIRIGGLSGIYKQQHYHLGHYERPPYNENTIRSVYHVRHYDVLKLMHVKEP-- 167
Query: 155 VDLFLTNEWPSGVT 168
+D+F++++WP G+T
Sbjct: 168 LDIFMSHDWPLGIT 181
>sp|Q8BYK8|ZC3H6_MOUSE Zinc finger CCCH domain-containing protein 6 OS=Mus musculus
GN=Zc3h6 PE=2 SV=2
Length = 1177
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 312 GDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHS 368
G ++C K+ G C +G+ C F HD + ++ + VC + ++G C KG C Y HS
Sbjct: 272 GKQIC-KYFLEGRCIKGDHCKFNHDAELEKK--KEVC-KYYLQGYCTKGENCIYMHS 324
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 312 GDKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHS 368
G ++C K+ G C +G++C F HD + ++ + +C F ++G C KG C Y H+
Sbjct: 274 GKQIC-KYFLEGRCIKGDQCKFDHDAELEKR--KEIC-KFYLQGYCTKGENCIYMHN 326
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 313 DKMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKH 367
++MC F +GSC RG+ C+F H + A R +C F+ C G CS+ H
Sbjct: 726 NEMCV-FFLNGSCNRGDTCHFSHSSRAP----RPICKFFLTLQGCRNGNSCSFSH 775
>sp|Q6C4K3|DUS3_YARLI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=DUS3 PE=3 SV=1
Length = 622
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 311 DGDKMC---FKFIYSGS---CPRGEKCNFRHDT----DAREQCLRGVCLDFIIKGKCEKG 360
D KMC +F GS C G+KC F HD +++ + + GVC F + G+C +G
Sbjct: 89 DAIKMCSSALQFKEDGSPQECSYGDKCKFEHDLQKYLESKPKDIEGVCPVFDLTGQCPQG 148
Query: 361 PECSYKHSLQNDDSQRTHRSENASAN 386
+C + S ++ + + E AN
Sbjct: 149 YKCRWLSSHRDSEGKLLVDEEKKKAN 174
>sp|P47974|TISD_HUMAN Zinc finger protein 36, C3H1 type-like 2 OS=Homo sapiens GN=ZFP36L2
PE=1 SV=3
Length = 494
Score = 40.4 bits (93), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 9/79 (11%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 367
++C F SG+C GEKC F H R +C F G C GP C H
Sbjct: 157 ELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRC---H 213
Query: 368 SLQNDDSQRTHRSENASAN 386
+ N D +R S AS +
Sbjct: 214 FIHNADERRPAPSGGASGD 232
>sp|P47977|CTH2_YEAST mRNA decay factor CTH2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TIS11 PE=1 SV=1
Length = 285
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRH---DTDAREQCLR---GVCLDFIIKGKCEKGPECSYKH 367
++C F GSCP G KC F H + ++ C C+++ G C G C +KH
Sbjct: 173 ELCESFTLKGSCPYGSKCQFAHGLGELKVKKSCKNFRTKPCVNWEKLGYCPYGRRCCFKH 232
Query: 368 SLQND 372
ND
Sbjct: 233 GDDND 237
>sp|Q657B3|C3H7_ORYSJ Zinc finger CCCH domain-containing protein 7 OS=Oryza sativa subsp.
japonica GN=Os01g0572100 PE=2 SV=1
Length = 698
Score = 40.0 bits (92), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 24/120 (20%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTD-----------AREQCLRG------------VCLD 350
K+C +++ G C +G C F HDT AR CL+G C +
Sbjct: 433 KVCHFYLH-GKCQQGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPCHN 491
Query: 351 FIIKGKCEKGPECSYKHSLQNDDSQRTHRSENASANRSKECWFCLSSPSVESHLIVSVGE 410
F+ G C +G +C + H + + T ++ ++A+ E C S + V GE
Sbjct: 492 FMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNASSVPEKANCQEQTSRQKTSTVYSGE 551
>sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein 39 OS=Oryza sativa
subsp. japonica GN=Os05g0576300 PE=2 SV=1
Length = 343
Score = 39.7 bits (91), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 367
++C K+ +G+CP G++C F H +R VC + G C G C ++H
Sbjct: 272 ELCNKWEETGACPYGDQCQFAHGVAELRPVIRHPRYKTQVCRMVLAGGVCPYGHRCHFRH 331
Query: 368 SLQNDD 373
S+ D
Sbjct: 332 SITPAD 337
>sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens
GN=ZC3H3 PE=1 SV=3
Length = 948
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 10/62 (16%)
Query: 315 MCFKFIYSGSCPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDS 374
+C F+ G CP G KC +H +C DF +G C +G +C H Q S
Sbjct: 755 VCSDFL-KGYCPLGAKCKKKHTL---------LCPDFARRGACPRGAQCQLLHRTQKRHS 804
Query: 375 QR 376
+R
Sbjct: 805 RR 806
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 302 QKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNFRHDTDAREQC---LRGVCLDFIIKGKC- 357
Q+R+K + C + G C RGE+C + HD + C +RG C G C
Sbjct: 664 QRREKR-----KEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKK--TDGTCP 716
Query: 358 -------EKGPECSY 365
EK P CSY
Sbjct: 717 FSHHVSKEKMPVCSY 731
>sp|P0CS64|YTH1_CRYNJ mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=YTH1 PE=3 SV=1
Length = 332
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 23/126 (18%)
Query: 325 CPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENAS 384
C G+ C + HD + R VC+ F+ +GKCE G EC Y H R R E
Sbjct: 107 CKMGDNCEYTHDFNLRTM---PVCIWFVKQGKCELGGECLYFHP-------RDRRVECPD 156
Query: 385 ANRSKECWFCLSSPSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVP------NT 437
NR FC+ P+ H+ + + Y P +D L P + P N
Sbjct: 157 YNRG----FCVLGPNCPRKHIRRRLCDAYAAGF--CPDGKDCKLAHPSPNRPPAESYINP 210
Query: 438 ISTSPE 443
I PE
Sbjct: 211 IPPDPE 216
>sp|P0CS65|YTH1_CRYNB mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=YTH1 PE=3 SV=1
Length = 332
Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 50/126 (39%), Gaps = 23/126 (18%)
Query: 325 CPRGEKCNFRHDTDAREQCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTHRSENAS 384
C G+ C + HD + R VC+ F+ +GKCE G EC Y H R R E
Sbjct: 107 CKMGDNCEYTHDFNLRTM---PVCIWFVKQGKCELGGECLYFHP-------RDRRVECPD 156
Query: 385 ANRSKECWFCLSSPSV-ESHLIVSVGEYYYCALPKGPLVEDHVLVIPVEHVP------NT 437
NR FC+ P+ H+ + + Y P +D L P + P N
Sbjct: 157 YNRG----FCVLGPNCPRKHIRRRLCDAYAAGF--CPDGKDCKLAHPSPNRPPAESYINP 210
Query: 438 ISTSPE 443
I PE
Sbjct: 211 IPPDPE 216
>sp|A2ZVY5|C3H9_ORYSJ Zinc finger CCCH domain-containing protein 9 OS=Oryza sativa subsp.
japonica GN=Os01g0645000 PE=2 SV=1
Length = 333
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 274 DQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYSGSCPRGEKCNF 333
D G E +P+DS ++ + + + G ++C K+ +G CP G++C F
Sbjct: 232 DGGKKGDEQKAQPADSGAELEVY----------NQGMFKTELCNKWEETGDCPYGDQCQF 281
Query: 334 RHDTDAREQCLR------GVCLDFIIKGKCEKGPECSYKHSL 369
H +R VC + C G C ++HSL
Sbjct: 282 AHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHFRHSL 323
>sp|P53781|TTP_BOVIN Tristetraprolin OS=Bos taurus GN=ZFP36 PE=2 SV=1
Length = 324
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 367
++C F SG C G KC F H Q R +C F ++G+C G C + H
Sbjct: 105 ELCRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTELCHKFYLQGRCPYGSRCHFIH 164
Query: 368 SLQNDDSQRTH 378
+ D + H
Sbjct: 165 NPSEDLAAPGH 175
>sp|Q5BF62|DUS3_EMENI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=dus3 PE=3 SV=1
Length = 714
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 15/75 (20%)
Query: 311 DGDKMCFKFIYS-----GSCPRGEKCNFRHDTDA------RE--QCLRGVCLDFIIKGKC 357
D +C +YS CP G+KC F HD RE GVC + +GKC
Sbjct: 112 DSKGLCASRVYSPEFSPAECPFGDKCRFEHDLRTYLKEHKREDLNTFNGVCPVWSARGKC 171
Query: 358 EKGPECSY--KHSLQ 370
+ G +C + HS++
Sbjct: 172 DAGWKCRFVGSHSIE 186
>sp|P26651|TTP_HUMAN Tristetraprolin OS=Homo sapiens GN=ZFP36 PE=1 SV=1
Length = 326
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 314 KMCFKFIYSGSCPRGEKCNFRHDTDAREQCLRG------VCLDFIIKGKCEKGPECSYKH 367
++C F SG C G KC F H Q R +C F ++G+C G C + H
Sbjct: 107 ELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHFIH 166
Query: 368 SLQNDDSQRTH 378
+ D + H
Sbjct: 167 NPSEDLAAPGH 177
>sp|Q2UL89|DUS3_ASPOR tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=dus3 PE=3 SV=1
Length = 730
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 76/192 (39%), Gaps = 43/192 (22%)
Query: 212 AREPYSNVDAVHVTRFLGLAPVGNKEKQKFIHALSPTPAATMSAADISMKTPNTTLSPYT 271
A P +N + + R G+APV K +FI P AT + PNT +
Sbjct: 46 ASTPDNNANNIAPQRMRGVAPV----KPEFI-----IPRATGTEPQ-----PNTDDAAEA 91
Query: 272 FLDQGSHSKEAAKRPSDSVSDSQYWRYDVSQKRQKHGGGDGDKMCFKFIYS-----GSCP 326
+G+ +EA K+ + R S + +K +C I++ G+C
Sbjct: 92 ARHEGAQGQEAGKKKKKKPTGQNTNRTFGSSQDEK-------GLCPSRIFTPEFSPGACQ 144
Query: 327 RGEKCNFRHD--TDARE------QCLRGVCLDFIIKGKCEKGPECSYKHSLQNDDSQRTH 378
GEKC F HD T +E GVC + KGKC G +C S H
Sbjct: 145 WGEKCRFEHDLRTYLKEYKRGDLTTFDGVCPVWDAKGKCLSGWKCRLVGS---------H 195
Query: 379 RSENASANRSKE 390
+E +A+ KE
Sbjct: 196 MTERETADGRKE 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,993,675
Number of Sequences: 539616
Number of extensions: 9769970
Number of successful extensions: 23658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 23157
Number of HSP's gapped (non-prelim): 426
length of query: 604
length of database: 191,569,459
effective HSP length: 123
effective length of query: 481
effective length of database: 125,196,691
effective search space: 60219608371
effective search space used: 60219608371
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)