Query 007421
Match_columns 604
No_of_seqs 407 out of 2184
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 23:22:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007421.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007421hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03144 Carbon catabolite rep 100.0 2E-146 4E-151 1208.7 57.5 602 1-604 1-606 (606)
2 COG5239 CCR4 mRNA deadenylase, 100.0 9E-52 2E-56 419.1 16.0 312 253-600 30-367 (378)
3 KOG0620 Glucose-repressible al 100.0 2.3E-49 5.1E-54 416.5 13.4 330 224-603 2-356 (361)
4 KOG2338 Transcriptional effect 100.0 2.8E-45 6E-50 386.2 23.2 314 252-598 115-493 (495)
5 TIGR03395 sphingomy sphingomye 99.9 1.6E-24 3.4E-29 223.9 23.3 185 254-476 1-199 (283)
6 PRK11756 exonuclease III; Prov 99.9 4.3E-24 9.4E-29 219.2 19.1 254 254-598 1-268 (268)
7 COG3568 ElsH Metal-dependent h 99.9 5.7E-23 1.2E-27 205.3 15.7 243 253-599 9-258 (259)
8 PRK05421 hypothetical protein; 99.9 1.3E-21 2.7E-26 200.6 20.6 158 250-469 40-197 (263)
9 COG0708 XthA Exonuclease III [ 99.9 1.1E-21 2.3E-26 196.7 15.4 247 254-598 1-261 (261)
10 TIGR00195 exoDNase_III exodeox 99.9 1.1E-20 2.4E-25 192.4 18.8 241 254-596 1-254 (254)
11 PTZ00297 pantothenate kinase; 99.8 2E-19 4.3E-24 218.1 25.1 189 249-477 6-226 (1452)
12 TIGR00633 xth exodeoxyribonucl 99.8 4E-19 8.8E-24 180.3 19.3 150 254-468 1-155 (255)
13 PRK13911 exodeoxyribonuclease 99.8 8.2E-19 1.8E-23 178.2 18.3 236 254-596 1-249 (250)
14 KOG3873 Sphingomyelinase famil 99.8 4.8E-18 1.1E-22 172.9 14.8 272 251-602 6-296 (422)
15 smart00476 DNaseIc deoxyribonu 99.7 6.7E-17 1.5E-21 165.4 19.6 170 251-468 15-190 (276)
16 PF03372 Exo_endo_phos: Endonu 99.7 1.5E-16 3.3E-21 157.2 17.4 155 285-471 17-173 (249)
17 KOG2756 Predicted Mg2+-depende 99.7 4.6E-16 9.9E-21 152.8 15.7 159 250-466 96-255 (349)
18 PLN03158 methionine aminopepti 99.7 5.2E-17 1.1E-21 174.3 5.6 51 62-113 9-59 (396)
19 PRK15251 cytolethal distending 99.6 1.6E-13 3.4E-18 138.7 17.8 165 249-475 20-205 (271)
20 COG2374 Predicted extracellula 99.4 3.7E-12 8E-17 141.1 17.0 282 249-600 459-790 (798)
21 COG3021 Uncharacterized protei 99.4 2.1E-12 4.5E-17 131.9 11.8 159 250-476 85-244 (309)
22 KOG2738 Putative methionine am 99.3 4.9E-13 1.1E-17 133.3 2.2 69 62-135 6-75 (369)
23 smart00128 IPPc Inositol polyp 99.0 7.9E-09 1.7E-13 108.5 15.6 65 415-479 137-210 (310)
24 KOG0566 Inositol-1,4,5-triphos 98.0 8.5E-05 1.8E-09 85.0 13.9 67 415-481 672-744 (1080)
25 PF14529 Exo_endo_phos_2: Endo 97.6 0.00011 2.5E-09 65.1 6.1 43 538-593 77-119 (119)
26 PF01753 zf-MYND: MYND finger; 96.7 0.0014 3.1E-08 46.3 2.9 34 67-107 2-35 (37)
27 PLN03191 Type I inositol-1,4,5 96.2 0.015 3.3E-07 65.2 8.2 64 415-478 419-496 (621)
28 KOG1294 Apurinic/apyrimidinic 96.1 0.045 9.8E-07 57.9 11.3 63 523-597 265-334 (335)
29 COG5411 Phosphatidylinositol 5 96.1 0.0052 1.1E-07 65.9 4.1 50 416-465 165-217 (460)
30 COG5239 CCR4 mRNA deadenylase, 96.1 0.0052 1.1E-07 64.3 3.8 82 392-481 121-202 (378)
31 PTZ00312 inositol-1,4,5-tripho 92.1 0.46 1E-05 48.9 7.3 61 415-476 79-151 (356)
32 KOG1710 MYND Zn-finger and ank 90.0 0.15 3.3E-06 52.0 1.6 47 51-110 313-360 (396)
33 KOG1976 Inositol polyphosphate 89.8 0.4 8.7E-06 49.3 4.3 61 415-476 168-240 (391)
34 PF09889 DUF2116: Uncharacteri 80.4 1.6 3.4E-05 34.3 2.6 33 76-110 5-37 (59)
35 PF04438 zf-HIT: HIT zinc fing 68.7 4.5 9.7E-05 27.3 2.2 28 63-99 3-30 (30)
36 PRK00418 DNA gyrase inhibitor; 59.2 5.8 0.00013 31.5 1.5 27 73-99 5-34 (62)
37 PRK01343 zinc-binding protein; 57.0 5.8 0.00013 30.9 1.2 25 74-99 9-33 (57)
38 PF03884 DUF329: Domain of unk 53.7 5.5 0.00012 31.1 0.6 25 74-98 2-29 (57)
39 KOG3612 PHD Zn-finger protein 50.9 5.4 0.00012 44.3 0.2 39 65-113 530-568 (588)
40 COG3350 Uncharacterized conser 42.8 14 0.0003 28.3 1.3 11 90-100 28-38 (53)
41 PF02069 Metallothio_Pro: Prok 41.6 14 0.00031 28.2 1.2 19 82-100 20-38 (52)
42 PF06467 zf-FCS: MYM-type Zinc 35.9 24 0.00052 25.2 1.6 12 89-100 31-42 (43)
43 COG3024 Uncharacterized protei 35.7 19 0.00041 28.6 1.1 26 74-99 7-35 (65)
44 PTZ00235 DNA polymerase epsilo 33.8 84 0.0018 32.9 5.7 48 414-467 27-77 (291)
45 PF13824 zf-Mss51: Zinc-finger 24.6 1.3E+02 0.0028 23.4 3.9 31 73-110 13-43 (55)
46 COG4306 Uncharacterized protei 23.4 20 0.00044 32.3 -0.8 19 63-82 29-47 (160)
47 COG4068 Uncharacterized protei 23.2 34 0.00074 26.7 0.5 30 75-106 9-38 (64)
48 PF04181 RPAP2_Rtr1: Rtr1/RPAP 22.9 43 0.00093 27.7 1.1 12 90-101 59-70 (79)
49 KOG0565 Inositol polyphosphate 22.3 1.1E+02 0.0024 28.1 3.9 55 415-469 58-123 (145)
50 PF04945 YHS: YHS domain; Int 22.0 43 0.00092 24.6 0.8 11 90-100 25-35 (47)
51 KOG0808 Carbon-nitrogen hydrol 21.9 85 0.0018 32.1 3.1 27 283-309 99-125 (387)
52 COG1407 Predicted ICC-like pho 21.5 82 0.0018 31.9 3.0 51 415-465 20-75 (235)
No 1
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=100.00 E-value=2e-146 Score=1208.66 Aligned_cols=602 Identities=85% Similarity=1.358 Sum_probs=559.5
Q ss_pred CccEEEEecCCCCceeceeeeeEEEEecCCCCCCCCCCCCCCCCCCceeEEEEEeeccccccccccCCCCCCceeecchh
Q 007421 1 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDNAVTTEDVPESAPIDGHFLRYKWYRIQSDRKVAVCSVHPSEQATLQCLGC 80 (604)
Q Consensus 1 ~~~~~~~~l~~~~p~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~r~~~~~~~~~c~~~~~~~~~l~cp~c 80 (604)
||+|||||||+|||||||||+|||++||+||++++|||||++|++|+||||||||+|+++++++|++|++++|+||||+|
T Consensus 1 ~~~~~~~~l~~~~pi~g~~~~p~v~~~~~~~~~~~~d~~~~~~~~~~~~~~~w~r~~~~~~~~~c~~h~~~~a~lqCp~C 80 (606)
T PLN03144 1 MLSVVRVHLPSDIPIVGCELTPYVLLRRPDGTLTTDDVPESAPLDGYFLRYRWYRIQSDRKVAVCSVHPSEPATLQCVGC 80 (606)
T ss_pred CeeEEEEEcCCCCCeeeeeeEEEEEEEcCCCCcCcccCcccCCCCcceEEEEEEecCCCccceeEeecCCCcccccCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCceeecChHHHHHhHHHHHHHHHhhhcccccCCCchhhhccCcCCCCCccccccCCCCCCCCCccCCCccccC
Q 007421 81 VKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGSGVINASLSGSASNSSLTNGSTPLYP 160 (604)
Q Consensus 81 ~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (604)
+|+|+++..||||||+|||++|++||.+|+.|+.+.+|+++|+++++++++++|+|....+++|+.++.+++|||+++||
T Consensus 81 ~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (606)
T PLN03144 81 VKAKLPVSKSYHCSPKCFSDAWRHHRVLHERAASAVRENGNEEDELFGRFNSSGSGVLSTSDSGSASSASLTNGSVPLYP 160 (606)
T ss_pred hhcCCCcCcceeeCHHHHHHHHHHHHHHHHHhhhhhcccCccccccccccCCCccccccccccccccccccccCcccccc
Confidence 99999878899999999999999999999999888899999999999999999999999889888888899999999999
Q ss_pred cccccCC---CCceEEeccceeecCCccCCCceEEEEEEEeeCCcCCCCCCcceeeeccccCCCCCCCCceeeeCCCCCC
Q 007421 161 AAVTRSG---GETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLPVGHPNTLLTSRVIPAPSPSPRRLFPVNGSDMN 237 (604)
Q Consensus 161 ~~~~~~~---~~~w~~v~~~~~y~P~~~diG~~l~l~~~~~~~~~~~~~g~~~~i~~~~v~p~p~p~~R~~i~~~~~~~~ 237 (604)
.+..+.. +++|++||++++|||+++|||+.|||||+|+++..+.+.|.+.+++|.+|+|+|.|++|+||+++. .+
T Consensus 161 ~~~~~~~~~~~~~w~~vg~~~~y~p~~~d~g~~lk~~~~~~~~~~~~~~~~~~~~~t~~v~~~p~p~~R~~~~~~~--~~ 238 (606)
T PLN03144 161 SGIEQKTQVGGETWIEVGRSKTYTPTADDVGHVLKFECVVVDAETGLPVGHPQSILTSRVIPAPSPTPRRLIQVNG--LD 238 (606)
T ss_pred cccccccCCCCCceEEeCCCccccCChhhCCceEEEEEEEcccccCCCCccceeecccceecCCCCCCcceEEecc--cc
Confidence 9987777 899999999999999999999999999999999987888888899999999999999999999876 34
Q ss_pred cccccCCCCCCCCCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHH
Q 007421 238 MMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAP 317 (604)
Q Consensus 238 ~~~~~~~~~~~~~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~ 317 (604)
.++|++.+++..+..+|||||||||++.|+++++|+|||+|+|+|+||+++|+++|..++|||||||||+.++|+++|.+
T Consensus 239 ~~~~~~~~~~~~~~~~frVmSYNILAd~ya~~dly~ycp~~aL~W~yRk~lIl~EI~~~~aDIICLQEV~~~~~~d~~~p 318 (606)
T PLN03144 239 GMGHLDLDGRTSSAGTFTVLSYNILSDLYATSDMYSYCPPWALSWTYRRQNLLREIVGYRADILCLQEVQSDHFEEFFAP 318 (606)
T ss_pred cccccccccccCCCCCEEEEEeeeccccccCcccccCCCccccCHHHHHHHHHHHHHhcCCCEEEEeecCHHHHHHHHHh
Confidence 56677777777888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCeEEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEE
Q 007421 318 ELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALI 397 (604)
Q Consensus 318 ~L~~~GY~~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~ 397 (604)
.|.++||.++|..|++.++.++....||||||||++||++++.+.|+|++.++++++...++.++.++++|++++|+|++
T Consensus 319 ~L~~~GY~Gv~~~Kt~~~~~~~~~~~DGcAIFyr~drFeLv~~~~ief~~~~lslt~~~~~s~~~~~~l~Rl~kdNVAli 398 (606)
T PLN03144 319 ELDKHGYQALYKKKTTEVYTGNTYVIDGCATFFRRDRFSLVKKYEVEFNKAAQSLTEALIPSAQKKAALNRLLKDNVALI 398 (606)
T ss_pred hhhhcCceEEEeCCCCccccccccCCceeEEEEECcceEEEEeeeeeccchhhccCccccccccchhhhhhhccCcEEEE
Confidence 99999999999998776665666678999999999999999999999999999888877666678889999999999999
Q ss_pred EEEeeeecCCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhc
Q 007421 398 VVLEAKFSNQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAM 477 (604)
Q Consensus 398 ~~Le~k~~~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~ 477 (604)
++|+.+.+.......+.++.|+|+||||+|+|.+.++|+.|+..|++.|+++....++|+|||||||+.|+|++|++|++
T Consensus 399 v~Le~k~~~~~~~~~~~~~~l~VaNTHL~~~p~~~dvRl~Q~~~Ll~~l~~~~~~~~~PvIlcGDFNS~P~S~vy~lLt~ 478 (606)
T PLN03144 399 VVLEAKFGNQGADNGGKRQLLCVANTHIHANQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHCLLAT 478 (606)
T ss_pred EEEEEecccccccCCCCccEEEEEEeeeccCCccchhHHHHHHHHHHHHHHHhhcCCCceEEeccCCCCCCChhhhhhhc
Confidence 99999754322222234568999999999999999999999999999999987767899999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcCCCCccccCCCCcchhhhhhh-hccCCccccccccCCCCCCCCccccccCCCCcceeEEEEe
Q 007421 478 GKVEPVHPDLAVDPLTILRPHTKLTHQLPLVSAYSSFAR-IGVGLGMEHQRRRMDPTTNEPLFTHCTRDFIGTLDYIFYT 556 (604)
Q Consensus 478 G~v~~~h~d~~~~~~~~~~~~~~l~~~~~L~Say~~~~~-~~~g~g~~~~~~~~d~~~~~p~fTn~t~~f~~~LDYIf~s 556 (604)
|.++.+|+||..++++.+++..++.|+|+|.|||..+.+ .|.+.+++.+..++|+.+++|.||||+++|.++||||||+
T Consensus 479 G~v~~~h~d~~~~~~~~~~~~~~l~H~~~L~SAY~~~~~~~g~~~~~~~~~~r~~~~~geP~fTNyt~~F~gtlDYIfys 558 (606)
T PLN03144 479 GKVDPLHPDLAVDPLGILRPASKLTHQLPLVSAYSSFARMPGSGSGLEQQRRRMDPATNEPLFTNCTRDFIGTLDYIFYT 558 (606)
T ss_pred CCcCCCchhhccCccccccccccccCCCcccchhhhhccccccccchhhhhhccccccCCCCceeecCCcceeEEEEEEc
Confidence 999999999999999888866899999999999998743 3345567889999999999999999999999999999999
Q ss_pred CCCceeeeeeccCChhhhccCCCCCCCCCCCCcccEEEEEEEeecCCC
Q 007421 557 ADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEFRCKPRARR 604 (604)
Q Consensus 557 ~~~l~v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef~~k~~~~~ 604 (604)
++.|.+.+++++++++++.+..||||.+|||||+||+|||+|++|.||
T Consensus 559 ~~~L~v~~vL~lp~e~~l~~~~gLPn~~~PSDHI~L~AeF~~~~~~~~ 606 (606)
T PLN03144 559 ADSLTVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCKPRTRR 606 (606)
T ss_pred CCCceEEeecCCCCHHHhcccCCCCCCCCCCccccEeEEEEeccCCCC
Confidence 989999999999999999999999999999999999999999999886
No 2
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=100.00 E-value=9e-52 Score=419.06 Aligned_cols=312 Identities=34% Similarity=0.556 Sum_probs=255.8
Q ss_pred cEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEEecC
Q 007421 253 TFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKT 332 (604)
Q Consensus 253 ~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~~k~ 332 (604)
+|+|||||+||+.|+++.+|+|. +||++|.||...|++||..|+|||||||||+...|.+||++.|..+||+++|.+++
T Consensus 30 ~ftimTYN~Laq~y~~r~~y~~s-~~aL~W~~R~~~L~~EL~~Yn~Di~CLQEvd~~~~~~fw~~~l~~~gY~~if~~k~ 108 (378)
T COG5239 30 DFTIMTYNVLAQTYATRKMYPYS-GWALKWSYRSRLLLQELLYYNADILCLQEVDAEDFEDFWKDQLGKLGYDGIFIPKE 108 (378)
T ss_pred eeEEEehhhhhhhhccccccCCc-hhhhhhHHHHHHHHHHHhccCCceeeeehhhhhHHHHHHHHHhcccccceEEecCC
Confidence 79999999999999999999999 99999999999999999999999999999999999999999999999999999998
Q ss_pred Cc-ccCCCC--CCccceEEeeec----CceEEeEeEEEeechhhcccccccCcchhhhhhhhhhc-cCceE---EEEEEe
Q 007421 333 NE-VYNGNP--HTIDGCATFFRR----DRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLV-KDNVA---LIVVLE 401 (604)
Q Consensus 333 ~~-~~~~~~--~~~~G~Aif~r~----srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~-~~nva---l~~~Le 401 (604)
+. -++... ..++||||||++ +|+-++-.....|........ ...+....++|++ +++++ +++.+.
T Consensus 109 ~k~~~m~~~d~t~~dGc~if~k~~~~~sk~~li~~~~~~f~~p~~~~e----r~r~t~~~lnri~e~~~~~w~~l~~~l~ 184 (378)
T COG5239 109 RKVKWMIDYDTTKVDGCAIFLKRFIDSSKLGLILAVTHLFWHPYGYYE----RFRQTYILLNRIGEKDNIAWVCLFVGLF 184 (378)
T ss_pred CcccccccccccccceEEEEEEeccccchhhhhhhhhHhhcccceeeh----hhhHHHHHHHHHhhhhhcchhheeeeec
Confidence 73 222222 378999999998 553344332222222211100 0123346788887 67888 666666
Q ss_pred eeecCCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcC--------------CCcEEEEccCCCCC
Q 007421 402 AKFSNQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASA--------------DIPMLVCGDFNSVP 467 (604)
Q Consensus 402 ~k~~~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~--------------~~pvIlcGDFNs~p 467 (604)
.+. ++.+++|+|||++|+|.+.++++.|..++++++++...+. ..++.+||||||..
T Consensus 185 n~e---------~gd~~~va~Th~~w~~~~~dvk~iq~s~l~~~~k~~~~e~~~~d~~~~d~k~~~~~~~l~~gd~ns~~ 255 (378)
T COG5239 185 NKE---------PGDTPYVANTHLPWDPKYRDVKLIQCSLLYRELKKVLKEELNDDKEEGDIKSYPEVDILITGDFNSLR 255 (378)
T ss_pred cCC---------CCCceeEEeccccccCCCCchheehhhHHHHHHHHHhhhcCCcchhccccccCcccccccCCCcccee
Confidence 642 5778999999999999999999999999999999876432 23789999999999
Q ss_pred CChhHHhHhcCCCCCCCCCCCCCCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCCccccccCCCC
Q 007421 468 GSAPHALLAMGKVEPVHPDLAVDPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEPLFTHCTRDFI 547 (604)
Q Consensus 468 ~S~~~~lL~~G~v~~~h~d~~~~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p~fTn~t~~f~ 547 (604)
.|.+|.+|.++.+ ..|.++..+.++.+..+.+..|+..+.|.+ ..+++.||||+++|.
T Consensus 256 ~s~vy~~l~~~~~-q~H~~~~~~~~~lysvg~~~~h~~n~~~~~---------------------~~~~~~fTN~t~~~k 313 (378)
T COG5239 256 ASLVYKFLVTSQI-QLHESLNGRDFSLYSVGYKFVHPENLKSDN---------------------SKGELGFTNWTPGFK 313 (378)
T ss_pred cceehhhhhhHHH-HhhhcccccchhhhcccccccChhhcccCC---------------------CcCCccccccccccc
Confidence 9999999998544 468878777777777667788887776632 246899999999999
Q ss_pred cceeEEEEeCC-CceeeeeeccCChhhhccCCCCCCCCCCCCcccEEEEEEEee
Q 007421 548 GTLDYIFYTAD-SLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEFRCKP 600 (604)
Q Consensus 548 ~~LDYIf~s~~-~l~v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef~~k~ 600 (604)
|.||||||... .+++...+..+++++..+..|+|+..+||||+|+.++|....
T Consensus 314 G~iDYIfy~~~~~~~~~~~l~~ve~e~~~k~~G~pn~~~pSdhipl~~ef~~~~ 367 (378)
T COG5239 314 GVIDYIFYHGGLLTRQTGLLGVVEGEYASKVIGLPNMPFPSDHIPLLAEFASDH 367 (378)
T ss_pred ceeEEEEEecCcceeeeccccccccchhhhhcccCCCCCccccccchhcccccc
Confidence 99999999988 678888889999888889999999999999999999998854
No 3
>KOG0620 consensus Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins [Transcription]
Probab=100.00 E-value=2.3e-49 Score=416.46 Aligned_cols=330 Identities=47% Similarity=0.712 Sum_probs=265.2
Q ss_pred CCCceeeeCCCCCCcccccCCCCCCCCCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEE
Q 007421 224 SPRRLFPVNGSDMNMMGHIDSDGRISSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCL 303 (604)
Q Consensus 224 ~~R~~i~~~~~~~~~~~~~~~~~~~~~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcL 303 (604)
..|.++.++.. .......|+||||||+++.|+....|.|||.|++.|.||++.|+++|..++||||||
T Consensus 2 ~~~~~~~~~~~------------~~~~~~~~~v~s~n~l~~~~~~~~~~~~~~~~~~~w~~r~~~~~~ei~~~~ad~icL 69 (361)
T KOG0620|consen 2 FWRDLISVSGK------------DVPQGETFTVLSYNILSQLYATSKLYMYCPSWALSWEYRRQLLLEEILNYNADILCL 69 (361)
T ss_pred ChhheeeccCC------------CccCCceEEeechhhhhhhhcccCCCcccchhhccHHHHHHHHHHHHhCCCcceeec
Confidence 34667776541 123334999999999999999999999999999999999999999999999999999
Q ss_pred EccchhHHHHHhHHHHhhCCCeEEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhh
Q 007421 304 QEVQNDHFEEFFAPELDKHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKK 383 (604)
Q Consensus 304 QEV~~~~~~~~l~~~L~~~GY~~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~ 383 (604)
||| +.|.+++.+.|...||.+.|.+|++ ++....+..+|||||||+++|.++.+..++|+..++++.+. ..
T Consensus 70 qev--~~~~~~~~p~l~~~gY~g~~~~k~~-~~~~~~~~~dGcaiffk~s~f~li~~~~i~~n~~~~~~~~~------~~ 140 (361)
T KOG0620|consen 70 QEV--DRYHDFFSPELEASGYSGIFIEKTR-MGEVELEKIDGCAIFFKPSLFQLIHSSAIELNQLALSRLPP------NI 140 (361)
T ss_pred chh--hHHHHHccchhhhcCCcceeecccc-cchhhcccCceeeeeecchHHhhhhhhhhhhHHHHHhhcch------hH
Confidence 999 7899999999998999999999987 66666778999999999999999999999999987665222 23
Q ss_pred hhhhhhc-cCceEE-EEEEeeeecCCCCCCCCCceeEE--EEeeccccCCCCchhHHHHHHHHHHHHH-------HHh--
Q 007421 384 NALNRLV-KDNVAL-IVVLEAKFSNQGADTPGKRQLLC--VANTHVNVHQELKDVKLWQVHTLLKGLE-------KIA-- 450 (604)
Q Consensus 384 ~~~~R~~-~~nval-~~~Le~k~~~~~~~~~~~g~~l~--V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~-------~~~-- 450 (604)
...+|.+ .|+++. ++.|+.... ....++ ++|+|++|.+.+.++|+.|+..++..++ ++.
T Consensus 141 ~~~~~~~~~d~~~~~l~~L~~~~~--------~~~~~~~~~~n~h~~~~~~~~~vkl~qv~~l~~~~~~~~~~~~~~~~~ 212 (361)
T KOG0620|consen 141 AQLNRLTTLDNSGNKLVSLKAELG--------NMVSLPHLLLNTHILWDLPYEDVKLFQVLTLLLELAPLSPEILKIYRE 212 (361)
T ss_pred HHHHhhhccccccchhhhhhhhcC--------CceeeccccccceeccCCCccchHHHHHHHHhhcccccchhhhhhhcc
Confidence 3455655 677766 455555321 111122 4899999999999999999999998843 111
Q ss_pred -----hcCCCcEEEEccCCCCCCChhHHhHhcCCCCCCCCCCCCCCCCCcCC------CCccccCCCCcchhhhhhhhcc
Q 007421 451 -----ASADIPMLVCGDFNSVPGSAPHALLAMGKVEPVHPDLAVDPLTILRP------HTKLTHQLPLVSAYSSFARIGV 519 (604)
Q Consensus 451 -----~~~~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~d~~~~~~~~~~~------~~~l~~~~~L~Say~~~~~~~~ 519 (604)
.....|+++|||||+.|.+++|.++..|.+...|.||...++..-.. ...+.|.+.++++|
T Consensus 213 ~~~~~~~~~~p~l~~gdfNs~p~~~v~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 284 (361)
T KOG0620|consen 213 GNLATRIASFPLLLCGDFNSTPLSPVYALLASGILSPEDADNKDLPLMSALGSKVNKSYEEMSHDQRRKLEY-------- 284 (361)
T ss_pred ccccccccccceeeeccccCCCCccceeecccCCCCcchhhHhhccccccccccccccccccchhhhccccc--------
Confidence 11358999999999999999999999999999998887654432110 01134444444443
Q ss_pred CCccccccccCCCCCCCCccccccCCCCcceeEEEEeCCCceeeeeeccCCh-hhhccCCCCCCCCCCCCcccEEEEEEE
Q 007421 520 GLGMEHQRRRMDPTTNEPLFTHCTRDFIGTLDYIFYTADSLSVESLLELLDE-DSLRKDTALPSPEWSSDHIALLAEFRC 598 (604)
Q Consensus 520 g~g~~~~~~~~d~~~~~p~fTn~t~~f~~~LDYIf~s~~~l~v~~~~~~~~~-~~~~~~~~lP~~~~pSDHipl~aef~~ 598 (604)
.++++.|||++++|.|+||||||+.+.+.+..++..+++ +++.+++++||.++||||+||+|+|++
T Consensus 285 -------------~~~~~~ftn~t~~F~g~~DYIfys~~~~~~~~~L~~~~e~~~~~~~~~lPs~~~pSDHi~L~~ef~~ 351 (361)
T KOG0620|consen 285 -------------TTGEPRFTNYTPGFKGTLDYIFYSKAALIVESALELLDEDELVIKVTGLPSPHHPSDHIPLLAEFEI 351 (361)
T ss_pred -------------ccCccccccccCCccceeeEEEEccccccccccccCCChhhhhcccccCCCCCCCCccchhhccccc
Confidence 367888999999999999999999999999999999994 788999999999999999999999999
Q ss_pred eecCC
Q 007421 599 KPRAR 603 (604)
Q Consensus 599 k~~~~ 603 (604)
.+.++
T Consensus 352 ~~~~~ 356 (361)
T KOG0620|consen 352 APPKD 356 (361)
T ss_pred cCccc
Confidence 87654
No 4
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=100.00 E-value=2.8e-45 Score=386.20 Aligned_cols=314 Identities=33% Similarity=0.542 Sum_probs=242.9
Q ss_pred CcEEEEEecccCCcC---CCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEE
Q 007421 252 GTFSVLSYNILSDVY---ATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALY 328 (604)
Q Consensus 252 ~~~rVmSyNIl~~~y---a~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~ 328 (604)
-.|+||||||||+.+ ..+.+|+ |+..+|+|.+|.+.|+.||..++|||||||||+.+++..++.+.+..+||.++|
T Consensus 115 f~ftvmSYNILAQ~l~~~~~r~~~~-~s~~~L~W~~R~~~Ll~EL~~~dpDIlCLQEVq~d~~~~~~~~~~~~lGy~~~~ 193 (495)
T KOG2338|consen 115 FDFTVMSYNILAQDLLRDIRRLYFP-ESGPALKWLRRSQNLLNELKHYDPDVLCLQEVQEDHYPEFWQPLLGKLGYTGFF 193 (495)
T ss_pred cceEEEEehHhHHHHHHHhHHhhcc-CChhhcchhHHhHHHHHHHhhcCCCeeeehhhhhhhhHHHHHHHHhhcCceEEE
Confidence 489999999999988 4455777 999999999999999999999999999999999999999999999999999998
Q ss_pred EecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhc-cCceEEEEEEeeeecCC
Q 007421 329 KRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLV-KDNVALIVVLEAKFSNQ 407 (604)
Q Consensus 329 ~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~-~~nval~~~Le~k~~~~ 407 (604)
...++. +.+||||+|+.++|+++....+.|.... .+++ .+||++++.|+.++..
T Consensus 194 ~r~t~~-------KthG~ai~w~~~~F~lv~~~~l~y~~~~-----------------~~l~n~~NV~lvv~l~f~~~~- 248 (495)
T KOG2338|consen 194 KRRTGT-------KTHGVAILWHSAKFKLVNHSELNYFDSG-----------------SALANRDNVGLVVSLEFRLVD- 248 (495)
T ss_pred EeccCC-------CCceEEEEEecccceecccchhhccccc-----------------chhhcccceeEEEEEEecccC-
Confidence 887643 4689999999999999999998876321 1223 5899999999987532
Q ss_pred CCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcC--CCcEEEEccCCCCCCChhHHhHhcCCCCCCCC
Q 007421 408 GADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASA--DIPMLVCGDFNSVPGSAPHALLAMGKVEPVHP 485 (604)
Q Consensus 408 ~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~--~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~ 485 (604)
..++.|+|+||||.|+|...++|+.|..+|++.++++.+.. ..|+|+|||||+.|++.+|.+|+.|.+..+..
T Consensus 249 -----~~sq~ilVanTHLl~np~~~~vrL~Q~~iiL~~~~~~~~~~~~~~pi~l~GDfNt~p~~~~y~fl~~~~l~~~~~ 323 (495)
T KOG2338|consen 249 -----ESSQGILVANTHLLFNPSRSDVRLAQVYIILAELEKMSKSSKSHWPIFLCGDFNTEPDSPPYLFLTSGPLIYDGR 323 (495)
T ss_pred -----cccCceEEEeeeeeecCcccchhhHHHHHHHHHHHHHHhhcccCCCeEEecCCCCCCCCCcchhhhcCCceeccc
Confidence 13458999999999999999999999999999999997654 57999999999999999999999877653321
Q ss_pred -CCCC--------C--C---CCC--------------------cCCCCccccCCC----C-cchhhhhh-------hhcc
Q 007421 486 -DLAV--------D--P---LTI--------------------LRPHTKLTHQLP----L-VSAYSSFA-------RIGV 519 (604)
Q Consensus 486 -d~~~--------~--~---~~~--------------------~~~~~~l~~~~~----L-~Say~~~~-------~~~~ 519 (604)
.+.. . . .|. .+. .+..+... + ...|.... -.+.
T Consensus 324 ~~~~~e~s~~~~~~~~~~ge~g~d~~~~~~~~s~~k~~~~~~s~~~-~e~~t~~g~~~~~~~~~~~~h~~~~~~~s~~s~ 402 (495)
T KOG2338|consen 324 AAHTIEDSHRYVFSESRLGEEGEDDEEESAAFSRGKGQLSQASIPK-PEIFTATGDKNHLVELTYSEHESLKVNVSLYSH 402 (495)
T ss_pred ccccccccccccccccccCcccccchhhhhhhccCccccccccCCC-ccccccccccchhHHHHHHHhhhhhcccceeec
Confidence 1100 0 0 000 000 00000000 0 00000000 0012
Q ss_pred CCccccccccCCCCCCCCccccccCCCCcceeEEEEeCC-------------CceeeeeeccCChhhhccCCCCCCCCCC
Q 007421 520 GLGMEHQRRRMDPTTNEPLFTHCTRDFIGTLDYIFYTAD-------------SLSVESLLELLDEDSLRKDTALPSPEWS 586 (604)
Q Consensus 520 g~g~~~~~~~~d~~~~~p~fTn~t~~f~~~LDYIf~s~~-------------~l~v~~~~~~~~~~~~~~~~~lP~~~~p 586 (604)
|.|++....... ..++|.+|||...+.|.+|||||++. .+++...+.+|.++.+.+....|++.++
T Consensus 403 g~~~~~~~~~~~-~~gep~vt~~~~~~~g~~dyif~~~~~~~~~~~~~~~~~~ikl~~~l~ip~~~e~~k~~~p~~~~~~ 481 (495)
T KOG2338|consen 403 GYGLVHTENAWL-DRGEPGVTNYALTWKGTLDYIFYSPGDCKQSNREFEEDEAIKLKGLLRIPSPQEMWKAGQPPNGRYG 481 (495)
T ss_pred cccccchhhccc-cCCCcceecHHhhhccceeeEEeccCcccccchhhhcccceeEEEEecCCCHHHhhccCCCCCCCCc
Confidence 333333222211 46799999999999999999999988 7888889999999999888899999999
Q ss_pred CCcccEEEEEEE
Q 007421 587 SDHIALLAEFRC 598 (604)
Q Consensus 587 SDHipl~aef~~ 598 (604)
|||++|+|+|.+
T Consensus 482 SDH~aL~~~~~~ 493 (495)
T KOG2338|consen 482 SDHIALVAQFSL 493 (495)
T ss_pred ccceEeeEeeEe
Confidence 999999999987
No 5
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=99.93 E-value=1.6e-24 Score=223.92 Aligned_cols=185 Identities=17% Similarity=0.157 Sum_probs=123.4
Q ss_pred EEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHh-hCCCeEEEEecC
Q 007421 254 FSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELD-KHGYQALYKRKT 332 (604)
Q Consensus 254 ~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~-~~GY~~~~~~k~ 332 (604)
||||||||..-.+. -.+...|+.|.++|.+.+...++||||||||......+.|...|+ .++|...+....
T Consensus 1 lkVmtyNv~~l~~~--------~~~~~g~~~R~~~i~~~~~~~~~DVV~LQEv~~~~~~~~l~~~L~~~yp~~~~~~g~~ 72 (283)
T TIGR03395 1 IKILSHNVYMLSTN--------LYPNWGQMERADLIASADYIKNQDVVILNEAFDTSASKRLLDNLREEYPYQTDVIGRS 72 (283)
T ss_pred CeEEEEEeeeeccc--------ccCCccHhHHHHHHHHhhcccCCCEEEEecccchHHHHHHHHHHHhhCCceEeecccc
Confidence 68999999862211 112346899999999999999999999999987665555566674 456654332221
Q ss_pred Cc-------ccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeec
Q 007421 333 NE-------VYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFS 405 (604)
Q Consensus 333 ~~-------~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~ 405 (604)
.. .+........|++|| |||++++.....|.... ..+ ++ ..+.++.+.++.
T Consensus 73 ~~g~~~~~g~~~~~~~~~~G~~iL---Sr~Pi~~~~~~~f~~~~-----------~~d----~~-~~kg~l~a~i~~--- 130 (283)
T TIGR03395 73 KKGWDKTLGNYSSSALEDGGVAIV---SKWPIEEKIQYIFNKGC-----------GAD----NL-SNKGFAYVKINK--- 130 (283)
T ss_pred cccchhccccccccCccCCEEEEE---ECCCccccEEEEccCCC-----------CCc----cc-cCCceEEEEEec---
Confidence 10 011112345699999 88999887766554211 000 00 112334444443
Q ss_pred CCCCCCCCCceeEEEEeeccccCCC------CchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHh
Q 007421 406 NQGADTPGKRQLLCVANTHVNVHQE------LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 476 (604)
Q Consensus 406 ~~~~~~~~~g~~l~V~NTHL~~~p~------~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~ 476 (604)
.|+.|.|+||||.+... ....|..|+..|.+.+++.....+.|+|||||||..|++..|+.|.
T Consensus 131 --------~g~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~~~i~~~~~~~~~pvIl~GDfN~~~~s~~~~~ml 199 (283)
T TIGR03395 131 --------NGKKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQDFIDSKNIPKDETVLIGGDLNVNKGSNEYHDMF 199 (283)
T ss_pred --------CCeEEEEEEeCCCCCcccccccccHHHHHHHHHHHHHHHhhccCCCCceEEEEeeCCCCCCCHHHHHHH
Confidence 36789999999976421 2468999999999988754323467899999999999999997554
No 6
>PRK11756 exonuclease III; Provisional
Probab=99.92 E-value=4.3e-24 Score=219.23 Aligned_cols=254 Identities=20% Similarity=0.226 Sum_probs=146.4
Q ss_pred EEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEEecCC
Q 007421 254 FSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTN 333 (604)
Q Consensus 254 ~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~~k~~ 333 (604)
||||||||.. +..|...|++.|...+||||||||+....- .+-...+...||..++..+.
T Consensus 1 mri~T~Nv~g------------------~~~~~~~i~~~i~~~~pDIi~LQE~~~~~~-~~~~~~~~~~gy~~~~~~~~- 60 (268)
T PRK11756 1 MKFVSFNING------------------LRARPHQLEAIIEKHQPDVIGLQETKVHDE-MFPLEEVEALGYHVFYHGQK- 60 (268)
T ss_pred CEEEEEEcCC------------------HHHHHHHHHHHHHhcCCCEEEEEecccccc-cCCHHHHHhcCCEEEEeCCC-
Confidence 5899999986 345667799999999999999999854211 11122345679987765432
Q ss_pred cccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCCCCCC
Q 007421 334 EVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGADTPG 413 (604)
Q Consensus 334 ~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~~~~~ 413 (604)
...|+||| +|++++.... .+.. . ... ..+.++.+.++..
T Consensus 61 --------~~~Gvail---Sr~p~~~~~~-~~~~------------~-~~~------~~~r~l~~~i~~~---------- 99 (268)
T PRK11756 61 --------GHYGVALL---SKQTPIAVRK-GFPT------------D-DEE------AQRRIIMATIPTP---------- 99 (268)
T ss_pred --------CCCEEEEE---ECCChHHeEE-CCCC------------c-ccc------ccCCEEEEEEEcC----------
Confidence 24699999 4555543321 1110 0 000 0122345555441
Q ss_pred CceeEEEEeeccccCCC-----CchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhcCCCCCCCCCCC
Q 007421 414 KRQLLCVANTHVNVHQE-----LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEPVHPDLA 488 (604)
Q Consensus 414 ~g~~l~V~NTHL~~~p~-----~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~d~~ 488 (604)
.+ .+.|+|+|+..... ....|..|+..|.+.|.+.. ..+.|+|+|||||..|++.-.. .+ ..++..|.
T Consensus 100 ~g-~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~~~-~~~~pvIl~GDfN~~~~~~D~~---~~--~~~~~~~~ 172 (268)
T PRK11756 100 NG-NLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLETEL-SPDNPLLIMGDMNISPTDLDIG---IG--EENRKRWL 172 (268)
T ss_pred CC-CEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHHHh-ccCCCEEEEeecccCCChhhcC---Cc--ccChHHhc
Confidence 22 38999999954322 11357788888888887763 3456999999999998643110 00 00011110
Q ss_pred CCCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCCcccccc-------CCCCcceeEEEEeCCCce
Q 007421 489 VDPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEPLFTHCT-------RDFIGTLDYIFYTADSLS 561 (604)
Q Consensus 489 ~~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p~fTn~t-------~~f~~~LDYIf~s~~~l~ 561 (604)
.... . .+ .....+.+..+ ...|+.|.+|.+++. ..+.||+|. .+...||||||+++. +.
T Consensus 173 ~~~~------~----~~-~~~er~~~~~l-~~~~l~D~~R~~~p~-~~~~~T~~~~~~~~~~~~~g~RIDyi~~s~~-~~ 238 (268)
T PRK11756 173 RTGK------C----SF-LPEEREWLDRL-MDWGLVDTFRQLNPD-VNDRFSWFDYRSKGFDDNRGLRIDLILATQP-LA 238 (268)
T ss_pred ccCC------c----cC-CHHHHHHHHHH-HhCCcEeehhhhCCC-CCCcccCcCCcccccccCCceEEEEEEeCHH-HH
Confidence 0000 0 00 01122222222 234678888877764 245788762 235679999999987 43
Q ss_pred --eeeeeccCChhhhccCCCCCCCCCCCCcccEEEEEEE
Q 007421 562 --VESLLELLDEDSLRKDTALPSPEWSSDHIALLAEFRC 598 (604)
Q Consensus 562 --v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef~~ 598 (604)
+.......+ . ....+||||.||+++|++
T Consensus 239 ~~v~~~~i~~~--~-------~~~~~~SDH~PV~~~~~~ 268 (268)
T PRK11756 239 ERCVETGIDYD--I-------RGMEKPSDHAPIWATFKL 268 (268)
T ss_pred hhheEeEEeHH--H-------hCCCCCCCcccEEEEEeC
Confidence 333322211 1 124579999999999974
No 7
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=99.90 E-value=5.7e-23 Score=205.30 Aligned_cols=243 Identities=27% Similarity=0.294 Sum_probs=148.4
Q ss_pred cEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhH------HHHHhHHHHh-hCCCe
Q 007421 253 TFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDH------FEEFFAPELD-KHGYQ 325 (604)
Q Consensus 253 ~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~------~~~~l~~~L~-~~GY~ 325 (604)
.++|+||||..+.-. .++.++.+.|.+.|....+||||||||+..+ +.+. ...+. ..+..
T Consensus 9 ~~~v~TyNih~~~~~------------~d~r~~~~r~~~~i~~~~~Div~LQEv~~~~~~~r~~~~~~-~~~~~~~~~~~ 75 (259)
T COG3568 9 RFKVLTYNIHKGFGA------------FDRRFDLPRIAEVIREVGADIVALQEVDGAFGRHRDGLLDL-PHLLGRLGLAP 75 (259)
T ss_pred eeEEEEEEEEEccCc------------cCceecHHHHHHHHHhhccCeeeeecccccccccccccchh-HHHHHHhcCCc
Confidence 489999999986422 1566778999999999999999999998621 2221 12222 22333
Q ss_pred EEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeec
Q 007421 326 ALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFS 405 (604)
Q Consensus 326 ~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~ 405 (604)
+.+...... ....-..+|+||+ ++.++.......+... ..+..|.++++.++..
T Consensus 76 ~~~~~~~~~--a~~~~~~~GnaiL---S~~pi~~v~~~~lp~~-------------------~~~~~Rgal~a~~~~~-- 129 (259)
T COG3568 76 YWWSGAAFG--AVYGEGQHGNAIL---SRLPIRDVENLALPDP-------------------TGLEPRGALLAEIELP-- 129 (259)
T ss_pred cccchhhhh--hhcccceeeeEEE---ecCcccchhhccCCCC-------------------CCCCCceeEEEEEEcC--
Confidence 222221100 0112246899999 4655555433221110 0113457788888862
Q ss_pred CCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhcCCCCCCCC
Q 007421 406 NQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEPVHP 485 (604)
Q Consensus 406 ~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~ 485 (604)
.++.|.|+|+||.+.. ..|+.|+..|++.+.- . ...|+|+|||||+.|+|+.|+++..-..+.-.
T Consensus 130 --------~g~~l~V~~~HL~l~~---~~R~~Q~~~L~~~~~l--~-~~~p~vl~GDFN~~p~s~~yr~~~~~~~~~~~- 194 (259)
T COG3568 130 --------GGKPLRVINAHLGLSE---ESRLRQAAALLALAGL--P-ALNPTVLMGDFNNEPGSAEYRLAARSPLNAQA- 194 (259)
T ss_pred --------CCCEEEEEEEeccccH---HHHHHHHHHHHhhccC--c-ccCceEEEccCCCCCCCccceeccCCchhhcc-
Confidence 3678999999998644 6799999999883221 1 12299999999999999999766532211000
Q ss_pred CCCCCCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCCccccccCCCCcceeEEEEeCCCceeeee
Q 007421 486 DLAVDPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEPLFTHCTRDFIGTLDYIFYTADSLSVESL 565 (604)
Q Consensus 486 d~~~~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p~fTn~t~~f~~~LDYIf~s~~~l~v~~~ 565 (604)
.+..+.. .....+ .+.|.-+++-. +|||||+++. +.+.+.
T Consensus 195 --------------------~~~~~~~----------------~a~~~~-~~tfps~~p~l--riD~Ifvs~~-~~i~~~ 234 (259)
T COG3568 195 --------------------ALTGAFA----------------PAVGRT-IRTFPSNTPLL--RLDRIFVSKE-LAIRSV 234 (259)
T ss_pred --------------------ccccccC----------------cccCcc-cCCCCCCCccc--cccEEEecCc-ccEEEE
Confidence 0000000 000000 23555555543 9999999987 777766
Q ss_pred eccCChhhhccCCCCCCCCCCCCcccEEEEEEEe
Q 007421 566 LELLDEDSLRKDTALPSPEWSSDHIALLAEFRCK 599 (604)
Q Consensus 566 ~~~~~~~~~~~~~~lP~~~~pSDHipl~aef~~k 599 (604)
....+.. ....|||+||.|++.++
T Consensus 235 ~v~~~~~----------a~~aSDHlPl~aeL~~~ 258 (259)
T COG3568 235 HVLTDRL----------ARVASDHLPLLAELRLK 258 (259)
T ss_pred EeecCCC----------ccccccccceEEEEecC
Confidence 5544321 23479999999999986
No 8
>PRK05421 hypothetical protein; Provisional
Probab=99.88 E-value=1.3e-21 Score=200.61 Aligned_cols=158 Identities=22% Similarity=0.203 Sum_probs=98.2
Q ss_pred CCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEE
Q 007421 250 STGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYK 329 (604)
Q Consensus 250 ~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~ 329 (604)
.+++||||||||+..... +....++.| .++|||||||||+.... +...+...|+.+.|.
T Consensus 40 ~~~~lri~t~NI~~~~~~-----------------~~~~~l~~l-~~~~DiI~LQEv~~~~~---~~~~~~~~~~~~~~~ 98 (263)
T PRK05421 40 TEERLRLLVWNIYKQQRA-----------------GWLSVLKNL-GKDADLVLLQEAQTTPE---LVQFATANYLAADQA 98 (263)
T ss_pred cCCceeEEEEEccccccc-----------------cHHHHHHHh-ccCCCEEEEEecccCcc---hHHHhhcccchHHhc
Confidence 347899999999985421 123455555 89999999999975432 122233445544333
Q ss_pred ecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCC
Q 007421 330 RKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGA 409 (604)
Q Consensus 330 ~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~ 409 (604)
..... .....|+||+ |||++.....+.... + ....++.++++.++..
T Consensus 99 ~~~~~-----~~~~~GvaiL---SR~pi~~~~~~~~~~----------~---------~~~~~r~~l~a~~~~~------ 145 (263)
T PRK05421 99 PAFVL-----PQHPSGVMTL---SKAHPVYCCPLRERE----------P---------WLRLPKSALITEYPLP------ 145 (263)
T ss_pred ccccc-----CCCccceeEe---eecccceeeccCCCC----------c---------cccCcceeEEEEEEeC------
Confidence 22110 1235699999 788887654331100 0 0012346677777652
Q ss_pred CCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCC
Q 007421 410 DTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGS 469 (604)
Q Consensus 410 ~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S 469 (604)
.++.|.|+||||.+.......|..|+..|.+.+... ..|+|+|||||+.+.+
T Consensus 146 ----~g~~l~v~ntHl~~~~~~~~~r~~q~~~l~~~~~~~----~~p~Il~GDFN~~~~~ 197 (263)
T PRK05421 146 ----NGRTLLVVNIHAINFSLGVDVYSKQLEPIGDQIAHH----SGPVILAGDFNTWSRK 197 (263)
T ss_pred ----CCCEEEEEEECccccCcChHHHHHHHHHHHHHHHhC----CCCEEEEcccccCccc
Confidence 356799999999532122366888998888777543 4699999999997653
No 9
>COG0708 XthA Exonuclease III [DNA replication, recombination, and repair]
Probab=99.87 E-value=1.1e-21 Score=196.69 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=146.9
Q ss_pred EEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEEecCC
Q 007421 254 FSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTN 333 (604)
Q Consensus 254 ~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~~k~~ 333 (604)
+||+||||.+ ...|...+++.|..++||||||||+-... ..|=...++..||+.++....
T Consensus 1 mkI~SwNVNg------------------iRar~~~~~~~l~~~~pDVlclQEtK~~~-~~fp~~~~~~~GY~~~~~~gq- 60 (261)
T COG0708 1 MKIASWNVNG------------------LRARLKKLLDWLEEEQPDVLCLQETKAQD-EQFPREELEALGYHHVFNHGQ- 60 (261)
T ss_pred CeeEEEehhh------------------HHHHHHHHHHHHHHhCCCEEEEEecccCc-ccCCHhHHhhCCceEEEecCc-
Confidence 5899999998 34677779999999999999999995431 223245566789965554332
Q ss_pred cccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCCCCCC
Q 007421 334 EVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGADTPG 413 (604)
Q Consensus 334 ~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~~~~~ 413 (604)
+...|+||++|... .+. ...|... ...+...|+ ++..+.
T Consensus 61 -------KgysGVailsr~~~---~~v-~~g~~~~------------~~~d~e~R~----------I~a~~~-------- 99 (261)
T COG0708 61 -------KGYSGVAILSKKPP---DDV-RRGFPGE------------EEDDEEGRV----------IEAEFD-------- 99 (261)
T ss_pred -------CCcceEEEEEccCc---hhh-hcCCCCC------------ccccccCcE----------EEEEEC--------
Confidence 23469999966433 211 1111100 001111232 222121
Q ss_pred CceeEEEEeeccccCCC----CchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhcCCCCCCCCC--C
Q 007421 414 KRQLLCVANTHVNVHQE----LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEPVHPD--L 487 (604)
Q Consensus 414 ~g~~l~V~NTHL~~~p~----~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~d--~ 487 (604)
.|.|+|.-+..... ..+.|+.-...+.+++++... .+.|+|+|||||..|. .+|..++. |
T Consensus 100 ---~~~v~~~Y~PnG~~~~~~k~~yKl~f~~~l~~~l~~l~~-~~~~~vl~GD~NIap~----------~iDv~~~~~~~ 165 (261)
T COG0708 100 ---GFRVINLYFPNGSSIGLEKFDYKLRFLDALRNYLEELLK-KGKPVVLCGDFNIAPE----------EIDVANPKKRW 165 (261)
T ss_pred ---CEEEEEEEcCCCCCCCCcchHHHHHHHHHHHHHHHHHhh-cCCCEEEecccccCCc----------hhcccCchhhh
Confidence 16777776533221 134677777777778877754 4589999999999886 23333221 2
Q ss_pred C-CCCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCCcccccc-------CCCCcceeEEEEeCCC
Q 007421 488 A-VDPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEPLFTHCT-------RDFIGTLDYIFYTADS 559 (604)
Q Consensus 488 ~-~~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p~fTn~t-------~~f~~~LDYIf~s~~~ 559 (604)
. .+..+ -+....+++..+ ...|+.|++|.+.++.+. ||+|. .+...|||||+.|+.
T Consensus 166 ~n~~~~~------------f~~eeR~~~~~l-l~~G~~D~~R~~~p~~~~--YTwW~YR~~~~~~n~G~RID~~l~S~~- 229 (261)
T COG0708 166 LNEGNSG------------FLPEERAWFRRL-LNAGFVDTFRLFHPEPEK--YTWWDYRANAARRNRGWRIDYILVSPA- 229 (261)
T ss_pred hcCCCCC------------CCHHHHHHHHHH-HHcchhhhhHhhCCCCCc--ccccccccchhhhcCceeEEEEEeCHH-
Confidence 1 11111 112234445444 667899999999876554 99983 246789999999987
Q ss_pred ceeeeeeccCChhhhccCCCCCCCCCCCCcccEEEEEEE
Q 007421 560 LSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEFRC 598 (604)
Q Consensus 560 l~v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef~~ 598 (604)
|.-.-....++. .++. ...||||.||+++|.+
T Consensus 230 L~~~~~~a~I~~-~~rg------~e~pSDHaPV~~e~~~ 261 (261)
T COG0708 230 LADRLKDAGIDR-EVRG------WEKPSDHAPVWVELDL 261 (261)
T ss_pred HHHHHHhcCccH-HHhc------CCCCCCcCcEEEEecC
Confidence 322111111121 1221 3469999999999964
No 10
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=99.86 E-value=1.1e-20 Score=192.42 Aligned_cols=241 Identities=22% Similarity=0.332 Sum_probs=134.1
Q ss_pred EEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEEecCC
Q 007421 254 FSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKTN 333 (604)
Q Consensus 254 ~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~~k~~ 333 (604)
|||+||||... ..+...++++|..++||||||||+.... ..+....+...||..++....
T Consensus 1 mri~t~Ni~g~------------------~~~~~~~~~~l~~~~~DIi~LQE~~~~~-~~~~~~~~~~~g~~~~~~~~~- 60 (254)
T TIGR00195 1 MKIISWNVNGL------------------RARLHKGLAWLKENQPDVLCLQETKVQD-EQFPLEPFHKEGYHVFFSGQK- 60 (254)
T ss_pred CEEEEEEcCcH------------------HHhHHHHHHHHHhcCCCEEEEEecccch-hhCCHHHhhcCCcEEEEecCC-
Confidence 68999999862 1234558999999999999999996543 122233345579987765431
Q ss_pred cccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCCCCCC
Q 007421 334 EVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGADTPG 413 (604)
Q Consensus 334 ~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~~~~~ 413 (604)
...|+||++|.....+.. .+.... .+ ...++ +. ++.
T Consensus 61 --------g~~Gvailsr~~~~~~~~--~~~~~~---------------~~-----~~~r~-i~--~~~----------- 96 (254)
T TIGR00195 61 --------GYSGVAIFSKEEPLSVRR--GFGVEE---------------ED-----AEGRI-IM--AEF----------- 96 (254)
T ss_pred --------CcceEEEEEcCCcceEEE--CCCCcc---------------cc-----cCCCE-EE--EEE-----------
Confidence 235899997754333211 010000 00 01121 11 222
Q ss_pred CceeEEEEeeccccCCC----CchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhcCCCCCCCCCCCC
Q 007421 414 KRQLLCVANTHVNVHQE----LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEPVHPDLAV 489 (604)
Q Consensus 414 ~g~~l~V~NTHL~~~p~----~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~d~~~ 489 (604)
+.+.|+|||+..... ....|..+...|.+.+.++.. .+.|+|+|||||..+...-. ..++...
T Consensus 97 --~~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~-~~~pvIi~GDfN~~~~~~d~----------~~~~~~~ 163 (254)
T TIGR00195 97 --DSFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLEKLVD-KDKPVLICGDMNIAPTEIDL----------HSPDENR 163 (254)
T ss_pred --CCEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCcEEEEeecccCCChhhc----------cChhhcC
Confidence 127899999865211 224577778888888877643 35699999999998874211 0000000
Q ss_pred CCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCCccccccC-------CCCcceeEEEEeCCCce-
Q 007421 490 DPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEPLFTHCTR-------DFIGTLDYIFYTADSLS- 561 (604)
Q Consensus 490 ~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p~fTn~t~-------~f~~~LDYIf~s~~~l~- 561 (604)
+..+ +.+ .....+..+ ...|+.|..+...+. ...||+|.. +...+|||||++++ +.
T Consensus 164 ~~~~-~~~-----------~e~~~~~~l-~~~~l~D~~r~~~~~--~~~~T~~~~~~~~~~~~~g~RID~i~~s~~-~~~ 227 (254)
T TIGR00195 164 NHTG-FLP-----------EEREWLDRL-LEAGLVDTFRKFNPD--EGAYSWWDYRTKARDRNRGWRIDYFLVSEP-LKE 227 (254)
T ss_pred CCcC-cCh-----------HHHHHHHHH-HHcCCEeeecccCCC--CCCCcccCCcCCccccCCceEEEEEEECHH-HHh
Confidence 0000 000 011112111 123566666655554 346887631 23459999999987 44
Q ss_pred -eeeeeccCChhhhccCCCCCCCCCCCCcccEEEEE
Q 007421 562 -VESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 596 (604)
Q Consensus 562 -v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef 596 (604)
+.+.....+. ....++|||.||+++|
T Consensus 228 ~v~~~~i~~~~---------~~~~~~SDH~Pv~~~~ 254 (254)
T TIGR00195 228 RCVDCGIDYDI---------RGSEKPSDHCPVVLEF 254 (254)
T ss_pred hhhEEEEcHHH---------hcCCCCCCcccEEEeC
Confidence 3333222110 0134689999999985
No 11
>PTZ00297 pantothenate kinase; Provisional
Probab=99.84 E-value=2e-19 Score=218.11 Aligned_cols=189 Identities=21% Similarity=0.260 Sum_probs=117.2
Q ss_pred CCCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHh-CCCcEEEEEccchhH-----------HHHHhH
Q 007421 249 SSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIG-YRADIVCLQEVQNDH-----------FEEFFA 316 (604)
Q Consensus 249 ~~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~-~~aDIIcLQEV~~~~-----------~~~~l~ 316 (604)
.....||||||||..-. .+.-.|. .+.|...|.. .++||||||||.... +...+.
T Consensus 6 ~~~~~l~VlTyNv~~~~-----------~~~~~~~--~~ri~~~i~~l~~~DIv~lQEvf~~~~~~~~~~~~~~~~~~~~ 72 (1452)
T PTZ00297 6 AGCAQARVLSYNFNILP-----------RGCGGFQ--HERIETFLASVDAYDVVLLQEVYAASVLPYFLQKQLCFQKMLV 72 (1452)
T ss_pred CCCCceEEEEEEccccC-----------CCccccc--HHHHHHHHHhccCCCEEEEecccccccccccccccchhhHHHH
Confidence 34568999999987521 0111122 3555556666 477999999998632 334456
Q ss_pred HHHhhCCCeEEEEecCCcccC----CCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccC
Q 007421 317 PELDKHGYQALYKRKTNEVYN----GNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKD 392 (604)
Q Consensus 317 ~~L~~~GY~~~~~~k~~~~~~----~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~ 392 (604)
..|+..||.++...+... |. .......|+||+ |||++++...+.|..... .+... .
T Consensus 73 ~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~G~AIL---SR~PI~~~~~~~l~~~~~-----------~~~~~-----~ 132 (1452)
T PTZ00297 73 DELKARGFHHYVISKQPS-YLTMLRYNVCSDNGLIIA---SRFPIWQRGSYTFRNHER-----------GEQSV-----R 132 (1452)
T ss_pred HHHHhcCCceeEeecCcc-ccccccCccccCCEEEEE---ECCChhhceeeecCcccc-----------ccccc-----c
Confidence 677778997765554331 11 112356799999 999999988877653210 01111 2
Q ss_pred ceEEEEEEeeeecCCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHh--------hcCCCcEEEEccCC
Q 007421 393 NVALIVVLEAKFSNQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIA--------ASADIPMLVCGDFN 464 (604)
Q Consensus 393 nval~~~Le~k~~~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~--------~~~~~pvIlcGDFN 464 (604)
+.++.+.++.... .+..+.+.|+||||.+.... ..|..|+..+.+.++... ...+.|+|||||||
T Consensus 133 RG~L~a~I~vp~~------~g~~~~v~v~~tHL~~~~~~-~~R~~Q~~ql~~~i~~~i~~~~~~~~~~~~~PvILaGDFN 205 (1452)
T PTZ00297 133 RGCLFAEVEVPLA------EGGSQRIVFFNVHLRQEDSL-PSTSSQVQETRRFVESVIANVYEQNNDGAEIPFVIAGDFN 205 (1452)
T ss_pred cceEEEEEEcccc------CCCCceEEEEEeCCCCCCCc-chHHHHHHHHHHHHHHhhhhhcccccCCCCCCEEEEeeCC
Confidence 3456666664100 01235799999999876432 468899998888877521 11356999999999
Q ss_pred CC----C----CChhHHhHhc
Q 007421 465 SV----P----GSAPHALLAM 477 (604)
Q Consensus 465 s~----p----~S~~~~lL~~ 477 (604)
.. + .+..|+.|.+
T Consensus 206 ~~~~~~~~~~~~s~e~~~ml~ 226 (1452)
T PTZ00297 206 INGIDPHNGGHPTKRFQELLN 226 (1452)
T ss_pred CccccccccCCccHHHHHHHH
Confidence 65 2 4456654443
No 12
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=99.82 E-value=4e-19 Score=180.27 Aligned_cols=150 Identities=22% Similarity=0.316 Sum_probs=89.7
Q ss_pred EEEEEecccCCcCCCCCCCCCCCccccChHHHHHHH-HHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEEecC
Q 007421 254 FSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNL-LREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKT 332 (604)
Q Consensus 254 ~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I-~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~~k~ 332 (604)
|||+||||.... .|.+.+ ++.|..++||||||||+.... ..+....+...||..++....
T Consensus 1 lri~t~Nv~g~~------------------~~~~~~~~~~l~~~~~DIv~LQE~~~~~-~~~~~~~~~~~g~~~~~~~~~ 61 (255)
T TIGR00633 1 MKIISWNVNGLR------------------ARLHKLFLDWLKEEQPDVLCLQETKVAD-EQFPAELFEELGYHVFFHGAK 61 (255)
T ss_pred CEEEEEecccHH------------------HHhhccHHHHHHhcCCCEEEEEeccCch-hhCCHhHhccCCceEEEeecc
Confidence 689999998732 233455 899999999999999997653 222223345679988776543
Q ss_pred CcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCCCCC
Q 007421 333 NEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGADTP 412 (604)
Q Consensus 333 ~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~~~~ 412 (604)
. ....|+|||+|. ++..... .+... .... ..+ .+ .++.
T Consensus 62 ~-------~~~~G~ailsr~---~~~~~~~-~~~~~----------------~~~~--~~r-~l--~~~~---------- 99 (255)
T TIGR00633 62 S-------KGYSGVAILSKV---EPLDVRY-GFGGE----------------EHDE--EGR-VI--TAEF---------- 99 (255)
T ss_pred c-------CCcceEEEEEcC---CcceEEE-CCCCC----------------cccC--CCc-EE--EEEE----------
Confidence 2 123599999663 3332211 01100 0000 011 11 1221
Q ss_pred CCceeEEEEeeccccCCCC----chhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCC
Q 007421 413 GKRQLLCVANTHVNVHQEL----KDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPG 468 (604)
Q Consensus 413 ~~g~~l~V~NTHL~~~p~~----~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~ 468 (604)
+.+.|+|+|+...... ...|..|...+.+.+.+... .+.|+|+|||||+.++
T Consensus 100 ---~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~~~~~-~~~~~Il~GDFN~~~~ 155 (255)
T TIGR00633 100 ---DGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYEKELD-AGKPVIICGDMNVAHT 155 (255)
T ss_pred ---CCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHHHHHh-cCCcEEEEeecccCCC
Confidence 2488999998553311 13466677777766655432 4569999999999875
No 13
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=99.81 E-value=8.2e-19 Score=178.16 Aligned_cols=236 Identities=18% Similarity=0.270 Sum_probs=131.9
Q ss_pred EEEEEecccCCcCCCCCCCCCCCccccChHHHH-HHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEEecC
Q 007421 254 FSVLSYNILSDVYATSESYSYCPSWALSWAYRR-QNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYKRKT 332 (604)
Q Consensus 254 ~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~-~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~~k~ 332 (604)
+||+||||.+-. .|. ..+.+.|...+||||||||+-..... + .+...||..++....
T Consensus 1 mki~swNVNgir------------------~~~~~~~~~~l~~~~~DIiclQEtK~~~~~-~---~~~~~gY~~~~~~~~ 58 (250)
T PRK13911 1 MKLISWNVNGLR------------------ACMTKGFMDFFNSVDADVFCIQESKMQQEQ-N---TFEFKGYFDFWNCAI 58 (250)
T ss_pred CEEEEEEeCChh------------------HhhhhhHHHHHHhcCCCEEEEEeecccccc-c---ccccCCceEEEEecc
Confidence 589999999843 233 24788999999999999999654322 1 134569987664221
Q ss_pred CcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCCCCC
Q 007421 333 NEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGADTP 412 (604)
Q Consensus 333 ~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~~~~ 412 (604)
++...|+||++|.....+. ..+... ..+...| + + .++.
T Consensus 59 -------~kgy~GVAi~~k~~~~~v~----~~~~~~-------------~~d~eGR-----~-I--~~~~---------- 96 (250)
T PRK13911 59 -------KKGYSGVVTFTKKEPLSVS----YGINIE-------------EHDKEGR-----V-I--TCEF---------- 96 (250)
T ss_pred -------cCccceEEEEEcCCchheE----EcCCCC-------------cccccCC-----E-E--EEEE----------
Confidence 1234699999876422111 011100 0000112 1 1 2222
Q ss_pred CCceeEEEEeeccccCCC---CchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhcCCCCCCCCCCCC
Q 007421 413 GKRQLLCVANTHVNVHQE---LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVEPVHPDLAV 489 (604)
Q Consensus 413 ~~g~~l~V~NTHL~~~p~---~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~G~v~~~h~d~~~ 489 (604)
..+.|+|+....... ..+.|+.-...+.+.|+++. .+.|+|+|||||..+.. +|..++....
T Consensus 97 ---~~~~l~nvY~Pn~~~~~~r~~~K~~~~~~~~~~l~~l~--~~~~~Ii~GD~Nva~~~----------~D~~~~~~~~ 161 (250)
T PRK13911 97 ---ESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALE--LKKPVIVCGDLNVAHNE----------IDLENPKTNR 161 (250)
T ss_pred ---CCEEEEEEEecCCCCCCcchHHHHHHHHHHHHHHHhcc--cCCCEEEEccccCCCCh----------hhccChhhcC
Confidence 138889988743321 12234433445555666542 34699999999988762 2222111101
Q ss_pred CCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCCcccccc-------CCCCcceeEEEEeCCCce-
Q 007421 490 DPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEPLFTHCT-------RDFIGTLDYIFYTADSLS- 561 (604)
Q Consensus 490 ~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p~fTn~t-------~~f~~~LDYIf~s~~~l~- 561 (604)
...|.. ......+..+ ...|+.|.+|.++++. ...||+|. .+...+|||||+++. +.
T Consensus 162 ~~~gf~------------~~er~~f~~~-l~~gl~D~~R~~~p~~-~~~yTww~~~~~~~~~n~g~RIDyilvs~~-~~~ 226 (250)
T PRK13911 162 KNAGFS------------DEERGKFSEL-LNAGFIDTFRYFYPNK-EKAYTWWSYMQQARDKNIGWRIDYFLCSNP-LKT 226 (250)
T ss_pred CCCCcC------------HHHHHHHHHH-HhcCCeehhhhhCCCC-CCCCccCCCcCCccccCCcceEEEEEEChH-Hhh
Confidence 111110 1123334333 3357888888888753 24599875 245779999999987 32
Q ss_pred -eeeeeccCChhhhccCCCCCCCCCCCCcccEEEEE
Q 007421 562 -VESLLELLDEDSLRKDTALPSPEWSSDHIALLAEF 596 (604)
Q Consensus 562 -v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef 596 (604)
+..+... ....+|||.||+++|
T Consensus 227 ~~~~~~i~-------------~~~~~SDH~Pv~~~~ 249 (250)
T PRK13911 227 RLKDALIY-------------KDILGSDHCPVGLEL 249 (250)
T ss_pred hEEEEEEC-------------CCCCCCCcccEEEEe
Confidence 2222111 123469999999987
No 14
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=99.77 E-value=4.8e-18 Score=172.94 Aligned_cols=272 Identities=20% Similarity=0.233 Sum_probs=161.8
Q ss_pred CCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHh-hCCCeEEEE
Q 007421 251 TGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELD-KHGYQALYK 329 (604)
Q Consensus 251 ~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~-~~GY~~~~~ 329 (604)
.-++||++.|+++-.|+++. -..|...+-+++.....||+.||||....--.+|+.... .+.|..+|.
T Consensus 6 a~~lriltlN~Wgip~~Sk~-----------R~~Rm~~~g~~l~~E~yDiv~LQEvWs~eD~~~L~~~~ss~yPysh~FH 74 (422)
T KOG3873|consen 6 ALELRILTLNIWGIPYVSKD-----------RRHRMDAIGDELASEKYDIVSLQEVWSQEDFEYLQSGCSSVYPYSHYFH 74 (422)
T ss_pred hheeeeeEeeccccccccch-----------hHHHHHHHhHHHhhcccchhhHHHHHHHHHHHHHHHhccccCchHHhhh
Confidence 34799999999997766542 346778889999999999999999965322223444444 356666665
Q ss_pred ecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhh--c-cCceEEEEEEeeeecC
Q 007421 330 RKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRL--V-KDNVALIVVLEAKFSN 406 (604)
Q Consensus 330 ~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~--~-~~nval~~~Le~k~~~ 406 (604)
..- ...|+++| ||+++++...-.|.- ++...++-|- . .+-|++ ++|+.
T Consensus 75 SGi---------mGaGL~vf---SK~PI~~t~~~~y~l------------NG~p~~i~rGDWf~GK~Vgl-~~l~~---- 125 (422)
T KOG3873|consen 75 SGI---------MGAGLCVF---SKHPILETLFHRYSL------------NGYPHAIHRGDWFGGKGVGL-TVLLV---- 125 (422)
T ss_pred ccc---------ccCceEEe---ecCchhhhhhhcccc------------CCccceeeeccccccceeEE-EEEee----
Confidence 432 13599999 899998754322211 0111111111 1 223443 44444
Q ss_pred CCCCCCCCceeEEEEeeccccCCC-----CchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHhc-CCC
Q 007421 407 QGADTPGKRQLLCVANTHVNVHQE-----LKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAM-GKV 480 (604)
Q Consensus 407 ~~~~~~~~g~~l~V~NTHL~~~p~-----~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~~-G~v 480 (604)
.++.+.+.||||+..-+ +-.-|..|+-.+.+.++...+. ..-||+|||||+.|.+-.+++|+. |-+
T Consensus 126 -------~g~~v~~yntHLHAeY~rq~D~YL~HR~~QAwdlaqfi~~t~q~-~~vVI~~GDLN~~P~dl~~~ll~~a~l~ 197 (422)
T KOG3873|consen 126 -------GGRMVNLYNTHLHAEYDRQNDEYLCHRVAQAWDLAQFIRATRQN-ADVVILAGDLNMQPQDLGHKLLLSAGLV 197 (422)
T ss_pred -------CCEEeeeeehhccccccccCchhhhHHHHHHHHHHHHHHHHhcC-CcEEEEecCCCCCccccceeeeeccchh
Confidence 35889999999975322 2346999999999888876543 446899999999999999998874 333
Q ss_pred CC---CCCCCCCCCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCCCCCC--ccccc--cC--CCCccee
Q 007421 481 EP---VHPDLAVDPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPTTNEP--LFTHC--TR--DFIGTLD 551 (604)
Q Consensus 481 ~~---~h~d~~~~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~~~~p--~fTn~--t~--~f~~~LD 551 (604)
|. .|+|-...+.+.+.+..++. .|. .|..| .||-- .. -+..|||
T Consensus 198 daw~~~h~~q~e~~~~r~s~~~~l~----------------~g~-----------tcd~~~N~y~~aqk~~ddp~~~RiD 250 (422)
T KOG3873|consen 198 DAWTSLHLDQCESDSFRLSEDKELV----------------EGN-----------TCDSPLNCYTSAQKREDDPLGKRID 250 (422)
T ss_pred hhHhhhchhhhcCcccccchhhhhh----------------cCC-----------cccCcchhhhHHHhCCCCccceeee
Confidence 22 23333222222211100000 000 01122 22211 11 2478999
Q ss_pred EEEEeCCCceeeeeeccCChhhhccCCCCCCCCCCCCcccEEEEEEEeecC
Q 007421 552 YIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAEFRCKPRA 602 (604)
Q Consensus 552 YIf~s~~~l~v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~aef~~k~~~ 602 (604)
|||+++..++++.......+ .+.+++ ...-|||.+++|.|.+++..
T Consensus 251 Yvl~k~~~~~~~~a~~~~t~---~rvP~~--d~s~SDH~Al~a~L~I~~~~ 296 (422)
T KOG3873|consen 251 YVLVKPGDCNAKIAEVEFTE---PRVPGE--DCSYSDHEALMATLKIFKQP 296 (422)
T ss_pred EEEEcCcceEEEeeeEEecC---CCCCCC--CCCccchhhheeEEEeecCC
Confidence 99999987655433211111 022221 33469999999999998654
No 15
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.75 E-value=6.7e-17 Score=165.44 Aligned_cols=170 Identities=15% Similarity=0.206 Sum_probs=111.5
Q ss_pred CCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHH--hHHHHhh---CCCe
Q 007421 251 TGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEF--FAPELDK---HGYQ 325 (604)
Q Consensus 251 ~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~--l~~~L~~---~GY~ 325 (604)
...||||||||.... .....|..|++.|++.|. ++|||++|||...+...+ +.+.|.+ .+|.
T Consensus 15 ~~~l~I~SfNIr~fg-----------d~k~~~~~r~~~i~~il~--~~DIiglQEV~d~q~~~l~~ll~~Ln~~~~~~Y~ 81 (276)
T smart00476 15 AASLRICAFNIQSFG-----------DSKMSNATLMSIIVKILS--RYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYS 81 (276)
T ss_pred CCcEEEEEEECcccC-----------CccccHHHHHHHHHHHhc--cCCEEEEEEeecchhHHHHHHHHHHhhcCCCCce
Confidence 347999999998421 123579999999999998 679999999976554332 2344443 2566
Q ss_pred EEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeec
Q 007421 326 ALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFS 405 (604)
Q Consensus 326 ~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~ 405 (604)
++.....+ .....|..|+|||++++++++...+ .+. +. .+.+.+.| ...++.|+.+.+
T Consensus 82 ~v~s~r~g-----r~~~~E~~a~~Yr~drv~v~~~~~f--~d~---------~~-~~~~~F~R-----eP~~~~F~~~~~ 139 (276)
T smart00476 82 YVSSEPLG-----RNSYKEQYLFLYRSDLVSVLDSYLY--DDG---------CE-CGNDVFSR-----EPFVVKFSSPST 139 (276)
T ss_pred EEecCCCC-----CCCCCEEEEEEEecceEEEccccee--cCC---------CC-Cccccccc-----cceEEEEEeCCC
Confidence 65544322 2234588999999999999987653 221 00 23445555 457888887421
Q ss_pred CCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHH-hhcCCCcEEEEccCCCCCC
Q 007421 406 NQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKI-AASADIPMLVCGDFNSVPG 468 (604)
Q Consensus 406 ~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~-~~~~~~pvIlcGDFNs~p~ 468 (604)
.++.|.++|+|+.+. .+..++..|.+.+... .+....|+|++||||+.++
T Consensus 140 --------~~~~F~li~~H~~p~-----~~~~e~~aL~~v~~~~~~~~~~~~villGDFNa~~~ 190 (276)
T smart00476 140 --------AVKEFVIVPLHTTPE-----AAVAEIDALYDVYLDVRQKWGTEDVIFMGDFNAGCS 190 (276)
T ss_pred --------CCccEEEEEecCChH-----HHHHHHHHHHHHHHHHHHhhccCCEEEEccCCCCCC
Confidence 245799999999652 3444555555533322 2224679999999999764
No 16
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=99.72 E-value=1.5e-16 Score=157.18 Aligned_cols=155 Identities=27% Similarity=0.285 Sum_probs=89.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCC-eEEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEE
Q 007421 285 RRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGY-QALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEV 363 (604)
Q Consensus 285 R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY-~~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i 363 (604)
+.+.|++.|..++|||||||||....+.+.+...+...++ ...+........ .....|+|||||.+.+........
T Consensus 17 ~~~~i~~~i~~~~~Dii~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~i~~r~~~~~~~~~~~~ 93 (249)
T PF03372_consen 17 KRREIAQWIAELDPDIIALQEVRNDDLSELLEEQLRGYLGYYGSFWPGNSPPS---DAGGYGVAILSRSPIFSSVSYVFS 93 (249)
T ss_dssp HHHHHHHHHHHHT-SEEEEEEEESHHHHHHHHHHHHTCTTHEEEEEETSSSTT---CSSSEEEEEEESSCCCEEEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEecchhhhhhhhhhhhcccccccccceeccccccc---cccCceEEEEEccccccccccccc
Confidence 3445999999999999999999877666776777775444 444444322100 003469999998875555444332
Q ss_pred eechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHH
Q 007421 364 EFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLL 443 (604)
Q Consensus 364 ~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll 443 (604)
.+...... ..+.. ......+.+.. .++.|+|+|+|+.+ ....|..|...++
T Consensus 94 ~~~~~~~~--------------~~~~~-~~~~~~~~~~~-----------~~~~i~v~~~H~~~---~~~~~~~~~~~~~ 144 (249)
T PF03372_consen 94 LFSKPGIR--------------IFRRS-SKSKGIVPVSI-----------NGKPITVVNVHLPS---SNDERQEQWRELL 144 (249)
T ss_dssp EESSSTTC--------------EEEEE-EEEEEEEEEEE-----------ETEEEEEEEEETTS---HHHHHHHHHHHHH
T ss_pred cccccccc--------------ccccc-ccccccccccc-----------cceEEEeeeccccc---cchhhhhhhhhhh
Confidence 22111000 00000 00000111111 15679999999865 2344555577788
Q ss_pred HHHHHHhhcCC-CcEEEEccCCCCCCChh
Q 007421 444 KGLEKIAASAD-IPMLVCGDFNSVPGSAP 471 (604)
Q Consensus 444 ~~l~~~~~~~~-~pvIlcGDFNs~p~S~~ 471 (604)
+.+.++..... .|+|||||||+.+.+..
T Consensus 145 ~~~~~~~~~~~~~~~iv~GDfN~~~~~~~ 173 (249)
T PF03372_consen 145 ARIQKIYADNPNEPVIVMGDFNSRPDSRD 173 (249)
T ss_dssp HHHHHHHHTSSCCEEEEEEE-SS-BSSGG
T ss_pred hhhhhcccccccceEEEEeecccCCccch
Confidence 88877764332 37999999999988644
No 17
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=99.69 E-value=4.6e-16 Score=152.82 Aligned_cols=159 Identities=18% Similarity=0.250 Sum_probs=109.3
Q ss_pred CCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEE
Q 007421 250 STGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYK 329 (604)
Q Consensus 250 ~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~ 329 (604)
....|+++||||.... -.+...|...|...|+.++|||||||||....|.- +.. + +.-|..++.
T Consensus 96 ~g~~~S~~~WnidgLd-------------ln~l~~RMrAv~H~i~l~sPdiiflQEV~p~~y~~-~~K-~-~s~y~i~~~ 159 (349)
T KOG2756|consen 96 QGSMFSLITWNIDGLD-------------LNNLSERMRAVCHYLALYSPDVIFLQEVIPPYYSY-LKK-R-SSNYEIITG 159 (349)
T ss_pred cccEEEEEEeeccccc-------------cchHHHHHHHHHHHHHhcCCCEEEEeecCchhhHH-HHH-h-hhheeEEEe
Confidence 3456899999998632 12345899999999999999999999998765543 232 2 235665555
Q ss_pred ecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCC
Q 007421 330 RKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGA 409 (604)
Q Consensus 330 ~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~ 409 (604)
.+... .|.++ -..++|.+-+...+.|.+..+ -| .-++ +|..+
T Consensus 160 ~~~~~---------~~~~~-l~~s~~~Vks~~~i~F~NS~M----------------~R-----~L~I--~Ev~v----- 201 (349)
T KOG2756|consen 160 HEEGY---------FTAIM-LKKSRVKVKSQEIIPFPNSKM----------------MR-----NLLI--VEVNV----- 201 (349)
T ss_pred cccee---------eeeee-eehhhcCccccceeccCcchh----------------hh-----eeEE--EEEee-----
Confidence 55332 23344 456889998888888865321 12 1233 33322
Q ss_pred CCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhc-CCCcEEEEccCCCC
Q 007421 410 DTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAAS-ADIPMLVCGDFNSV 466 (604)
Q Consensus 410 ~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~-~~~pvIlcGDFNs~ 466 (604)
.|..++++|+||.+.-.....|..|..+.++.+++..+. .+..|||.||+|-.
T Consensus 202 ----~G~Kl~l~tsHLEStr~h~P~r~~qF~~~~~k~~EaIe~lPnA~ViFGGD~Nlr 255 (349)
T KOG2756|consen 202 ----SGNKLCLMTSHLESTRGHAPERMNQFKMVLKKMQEAIESLPNATVIFGGDTNLR 255 (349)
T ss_pred ----cCceEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEcCcccch
Confidence 355699999999876555667999999888888776543 46679999999964
No 18
>PLN03158 methionine aminopeptidase; Provisional
Probab=99.66 E-value=5.2e-17 Score=174.26 Aligned_cols=51 Identities=35% Similarity=0.780 Sum_probs=46.6
Q ss_pred cccccCCCCCCceeecchhhccCCCCCceeecChHHHHHhHHHHHHHHHhhh
Q 007421 62 VAVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAA 113 (604)
Q Consensus 62 ~~~c~~~~~~~~~l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~~~~ 113 (604)
..+|+ +|+++|+||||+|+|+|+++..||||||+|||++|++||.+|+.++
T Consensus 9 ~~~c~-~c~~~a~l~Cp~C~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h~~~~ 59 (396)
T PLN03158 9 PLACA-RCSKPAHLQCPKCLELKLPREGASFCSQDCFKAAWSSHKSVHTKAK 59 (396)
T ss_pred ccccc-CCCCcccccCccchhcCCCCCCceeECHHHHHHHHHHHHHHHHhhh
Confidence 35585 9999999999999999998778999999999999999999998754
No 19
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=99.55 E-value=1.6e-13 Score=138.74 Aligned_cols=165 Identities=16% Similarity=0.150 Sum_probs=97.4
Q ss_pred CCCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhC-CCcEEEEEccchhHHHHH-----hHH-----
Q 007421 249 SSTGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGY-RADIVCLQEVQNDHFEEF-----FAP----- 317 (604)
Q Consensus 249 ~~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~-~aDIIcLQEV~~~~~~~~-----l~~----- 317 (604)
..-..++|+|||+.+..+++. -+|. --+...|.++ ++|||++||+..-..... ..+
T Consensus 20 ~~~~~~~~~twn~qg~s~~~~----------~kw~---~~v~~l~~~~~~~DIla~QEags~p~~a~~~~~~~~~~g~~~ 86 (271)
T PRK15251 20 ANLEDYKVATWNLQGSSASTE----------SKWN---VNVRQLLSGENPADILMVQEAGSLPSSAVPTGRHVQPGGVGI 86 (271)
T ss_pred cccccceEEEeecCCCCCCCh----------hhhh---hhHHHHhcCCCCCCEEEEEecCCCcccccccccccccccccc
Confidence 345679999999998654432 2343 2355566665 599999999975322100 011
Q ss_pred -------HHh---hCCCeEEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhh
Q 007421 318 -------ELD---KHGYQALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALN 387 (604)
Q Consensus 318 -------~L~---~~GY~~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~ 387 (604)
.|. .-++.++|.... + -.....|+||+ ||++..+...+.... ...
T Consensus 87 ~v~ey~w~l~~~srpgm~YiY~~ai-D----~~ggr~glAIl---Sr~~a~~~~~l~~p~-----------------~~~ 141 (271)
T PRK15251 87 PIDEYTWNLGTRSRPNQVYIYYSRV-D----VGANRVNLAIV---SRRRADEVIVLRPPT-----------------VAS 141 (271)
T ss_pred CcccEEEEccCccCCCceEEEEecc-c----CCCCceeEEEE---ecccccceEEecCCC-----------------Ccc
Confidence 010 123445554331 1 11245699999 777766655443210 001
Q ss_pred hhccCceEEEEEEeeeecCCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCC
Q 007421 388 RLVKDNVALIVVLEAKFSNQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVP 467 (604)
Q Consensus 388 R~~~~nval~~~Le~k~~~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p 467 (604)
| ..+.+ +. + .+.++|||+.+... .-+..|+..+.+.... .....|+++|||||..|
T Consensus 142 R-----pilgi--~i------------~-~~~ffstH~~a~~~--~da~aiV~~I~~~f~~--~~~~~pw~I~GDFNr~P 197 (271)
T PRK15251 142 R-----PIIGI--RI------------G-NDVFFSIHALANGG--TDAGAIVRAVHNFFRP--NMRHINWMIAGDFNRSP 197 (271)
T ss_pred c-----ceEEE--Ee------------c-CeEEEEeeecCCCC--ccHHHHHHHHHHHHhh--ccCCCCEEEeccCCCCC
Confidence 2 22222 22 1 16899999977642 3388888877777651 12347999999999999
Q ss_pred CChhHHhH
Q 007421 468 GSAPHALL 475 (604)
Q Consensus 468 ~S~~~~lL 475 (604)
+|..+.++
T Consensus 198 ~sl~~~l~ 205 (271)
T PRK15251 198 DRLESTLD 205 (271)
T ss_pred cchhhhhc
Confidence 99876654
No 20
>COG2374 Predicted extracellular nuclease [General function prediction only]
Probab=99.42 E-value=3.7e-12 Score=141.12 Aligned_cols=282 Identities=18% Similarity=0.239 Sum_probs=164.7
Q ss_pred CCCCcEEEEEecccCCcCCCC------CCCCCCCc--cccChHHHHHHHHHHHHhCCCcEEEEEccchhHH--------H
Q 007421 249 SSTGTFSVLSYNILSDVYATS------ESYSYCPS--WALSWAYRRQNLLREIIGYRADIVCLQEVQNDHF--------E 312 (604)
Q Consensus 249 ~~~~~~rVmSyNIl~~~ya~~------~~y~y~p~--~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~--------~ 312 (604)
.-.+.|||.|||||+..-.-. ..|..|.. ..-+.+..+..|...|...+||||.|-|++...| .
T Consensus 459 ~v~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~ai~ 538 (798)
T COG2374 459 DVGGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDAIA 538 (798)
T ss_pred ccCceeeeeeeehhhhhccCCCCCCCccccccccCccchhHHHHHHHHHHHHHhhcchhhheeeeeeccCCCCCcHHHHH
Confidence 345689999999998432001 12322321 1223445567799999999999999999987633 2
Q ss_pred HHhHHHHh-hCCC--eEEEEecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhh
Q 007421 313 EFFAPELD-KHGY--QALYKRKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRL 389 (604)
Q Consensus 313 ~~l~~~L~-~~GY--~~~~~~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~ 389 (604)
+. ...|. +.|= .+.+...... .+-.....+++++|+.++..++.+..+.-+.+....- +..+.-+|
T Consensus 539 ~l-V~~lna~~G~~~~y~~v~p~~~--~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~-------~~~~~n~R- 607 (798)
T COG2374 539 QL-VNALNAKAGAGTRYAFVAPGRN--GGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVG-------EIDDNNAR- 607 (798)
T ss_pred HH-HHHHHhhcCCCceEEEEecCcc--CCcCCCceeEEEEeccceEEecccccccccccccccc-------cccccccC-
Confidence 32 33333 3332 2222222111 0112245689999999999999877654332221100 00000111
Q ss_pred ccCceEEEEEEeeeecCCCCCCCCCceeEEEEeeccccC----CC----------CchhHHHHHHHHHHHHHHH-hhcCC
Q 007421 390 VKDNVALIVVLEAKFSNQGADTPGKRQLLCVANTHVNVH----QE----------LKDVKLWQVHTLLKGLEKI-AASAD 454 (604)
Q Consensus 390 ~~~nval~~~Le~k~~~~~~~~~~~g~~l~V~NTHL~~~----p~----------~~~vR~~Q~~~Ll~~l~~~-~~~~~ 454 (604)
--++..++.+ ..+..|+|+.-||.+. |- ....|..|+.+|..+|+.. ....+
T Consensus 608 ----~~laqtF~~~---------~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~~~d 674 (798)
T COG2374 608 ----PPLAQTFQDL---------SGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTGKAD 674 (798)
T ss_pred ----cchhhhhhhc---------cCCcEEEEEEeeecccCCCCCCcccccccccchhhHHHHHHHHHHHHHhhCcccccC
Confidence 1222333332 1344588888899653 31 2457999999999999973 24467
Q ss_pred CcEEEEccCCCCCCChhHHhHhc-CCCCCCCCCCCCCCCCCcCCCCccccCCCCcchhhhhhhhccCCccccccccCCCC
Q 007421 455 IPMLVCGDFNSVPGSAPHALLAM-GKVEPVHPDLAVDPLTILRPHTKLTHQLPLVSAYSSFARIGVGLGMEHQRRRMDPT 533 (604)
Q Consensus 455 ~pvIlcGDFNs~p~S~~~~lL~~-G~v~~~h~d~~~~~~~~~~~~~~l~~~~~L~Say~~~~~~~~g~g~~~~~~~~d~~ 533 (604)
.+++|.||||+...+.+++.|.. |+.... ..+ .
T Consensus 675 ~~~viLGD~N~y~~edpI~~l~~aGy~~l~--------------------------------------------~~~--~ 708 (798)
T COG2374 675 ADIVILGDFNDYAFEDPIQALEGAGYMNLA--------------------------------------------ARF--H 708 (798)
T ss_pred CCEEEEeccchhhhccHHHHHhhcCchhhh--------------------------------------------hhc--c
Confidence 89999999999999999999886 422100 000 0
Q ss_pred CCCCccccccCCCCcceeEEEEeCCCceee-e----eeccCChhhhccCCCC----------CCCCCCCCcccEEEEEEE
Q 007421 534 TNEPLFTHCTRDFIGTLDYIFYTADSLSVE-S----LLELLDEDSLRKDTAL----------PSPEWSSDHIALLAEFRC 598 (604)
Q Consensus 534 ~~~p~fTn~t~~f~~~LDYIf~s~~~l~v~-~----~~~~~~~~~~~~~~~l----------P~~~~pSDHipl~aef~~ 598 (604)
.....|++...+..+.|||||.+.+..... . .+---++..+.-...| ++...+|||-||+..|.|
T Consensus 709 ~~~~~YSY~f~G~~gtLDhaLas~sl~~~v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~~~~~fR~SDHDPvvvglnL 788 (798)
T COG2374 709 DAGDRYSYVFNGQSGTLDHALASASLAAQVSGATEWHINADEPDALDYNLEFKGQNVSLYKTTNPFRASDHDPVVVGLNL 788 (798)
T ss_pred CCCCceEEEECCccchHhhhhhhhhhhhhccCceeeeecccccchhhhhhhhccccccccccCCccccCCCCCeEEEEEe
Confidence 123468888899999999999986621111 1 0000000001111112 367789999999999998
Q ss_pred ee
Q 007421 599 KP 600 (604)
Q Consensus 599 k~ 600 (604)
..
T Consensus 789 ~~ 790 (798)
T COG2374 789 LG 790 (798)
T ss_pred cc
Confidence 53
No 21
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.39 E-value=2.1e-12 Score=131.86 Aligned_cols=159 Identities=21% Similarity=0.118 Sum_probs=89.8
Q ss_pred CCCcEEEEEecccCCcCCCCCCCCCCCccccChHHHHHHHHHHHHhCCCcEEEEEccchhHHHHHhHHHHhhCCCeEEEE
Q 007421 250 STGTFSVLSYNILSDVYATSESYSYCPSWALSWAYRRQNLLREIIGYRADIVCLQEVQNDHFEEFFAPELDKHGYQALYK 329 (604)
Q Consensus 250 ~~~~~rVmSyNIl~~~ya~~~~y~y~p~~~l~w~~R~~~I~~eI~~~~aDIIcLQEV~~~~~~~~l~~~L~~~GY~~~~~ 329 (604)
....++++++|++++... ...++..|...++|+|.+||+..-+-. . ...++ ..|-++..
T Consensus 85 ~~~~~~~l~~N~r~~n~~------------------~~k~Lsl~~~~~~D~v~~~E~~~~~~~-~-~~~l~-~~yP~~~~ 143 (309)
T COG3021 85 DQRLLWNLQKNVRFDNAS------------------VAKLLSLIQQLDADAVTTPEGVQLWTA-K-VGALA-AQYPAFIL 143 (309)
T ss_pred cchhhhhhhhhccccCcC------------------HHHHHHHHhhhCcchhhhHHHHHHhHh-H-HHHHH-HhCCceee
Confidence 345789999998886421 255777777778999999999653222 1 11333 35554332
Q ss_pred ecCCcccCCCCCCccceEEeeecCceEEeEeEEEeechhhcccccccCcchhhhhhhhhhccCceEEEEEEeeeecCCCC
Q 007421 330 RKTNEVYNGNPHTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAILPSAQKKNALNRLVKDNVALIVVLEAKFSNQGA 409 (604)
Q Consensus 330 ~k~~~~~~~~~~~~~G~Aif~r~srf~lv~~~~i~f~~~~~~~~~~~~~~~~~~~~~~R~~~~nval~~~Le~k~~~~~~ 409 (604)
....+ ..-+.+++.++......+ ...+ -|.-++..+....+
T Consensus 144 ~~~~~-------~~~~~a~~sr~~~~~~~~------~e~~-----------------~~~pk~~~~t~~~~--------- 184 (309)
T COG3021 144 CQHPT-------GVFTLAILSRRPCCPLTE------AEPW-----------------LRLPKSALATAYPL--------- 184 (309)
T ss_pred cCCCC-------Ceeeeeeccccccccccc------cCcc-----------------ccCCccceeEEEEc---------
Confidence 22111 234677775543211111 0000 01111222222221
Q ss_pred CCCCCceeEEEEeeccc-cCCCCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChhHHhHh
Q 007421 410 DTPGKRQLLCVANTHVN-VHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLA 476 (604)
Q Consensus 410 ~~~~~g~~l~V~NTHL~-~~p~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~~~lL~ 476 (604)
..|+.+.|++.|.. |.-..+..| .|...|.+.+... +-|+|+.||||++|.|..++-|.
T Consensus 185 ---~~g~~l~v~~lh~~~~~~~~~~~~-~ql~~l~~~i~~~----~gpvIlaGDfNa~pWS~~~~R~~ 244 (309)
T COG3021 185 ---PDGTELTVVALHAVNFPVGTDPQR-AQLLELGDQIAGH----SGPVILAGDFNAPPWSRTAKRMA 244 (309)
T ss_pred ---CCCCEEEEEeeccccccCCccHHH-HHHHHHHHHHHcC----CCCeEEeecCCCcchhHHHHHHH
Confidence 14678999999996 432333334 6666665555543 46999999999999999876554
No 22
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=4.9e-13 Score=133.30 Aligned_cols=69 Identities=30% Similarity=0.736 Sum_probs=56.9
Q ss_pred ccccc-CCCCCCceeecchhhccCCCCCceeecChHHHHHhHHHHHHHHHhhhcccccCCCchhhhccCcCCCCC
Q 007421 62 VAVCS-VHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEELFGRFNSTGS 135 (604)
Q Consensus 62 ~~~c~-~~~~~~~~l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (604)
..+|+ .+|+++|+||||+|+|+|++ .+|||+|+|||.+|..||.+|.++.. ...+| ++++++.|+++|+
T Consensus 6 ~~~c~~~~c~~~a~l~Cp~c~~~~i~--~~~fc~q~cf~~~w~~hK~~h~~~~~-~~~~g--~~~p~p~~~~~g~ 75 (369)
T KOG2738|consen 6 KISCEGLQCGSEASLQCPTCLKLGIK--SAYFCAQECFKNSWLSHKKLHRKALR-IRKEG--QYNPWPKFRFTGP 75 (369)
T ss_pred hceeeccccCChhhccCchhhhcCCC--cccccCchhhhcchhhhhhhcccchh-hhhhc--cCCCCccccccCC
Confidence 35687 99999999999999999998 47999999999999999999986622 11222 3679999999874
No 23
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=98.99 E-value=7.9e-09 Score=108.51 Aligned_cols=65 Identities=14% Similarity=0.145 Sum_probs=44.9
Q ss_pred ceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhh-----cCCCcEEEEccCCCCCC----ChhHHhHhcCC
Q 007421 415 RQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAA-----SADIPMLVCGDFNSVPG----SAPHALLAMGK 479 (604)
Q Consensus 415 g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~-----~~~~pvIlcGDFNs~p~----S~~~~lL~~G~ 479 (604)
+..|+++|+||..+......|..|...+++.+.-... .....+|++||||---+ ..+-+++.++.
T Consensus 137 ~~~~~fv~~HL~a~~~~~~~R~~~~~~I~~~~~f~~~~~~~~~~~d~~f~~GDlNyRi~~~~~~~v~~~i~~~~ 210 (310)
T smart00128 137 DTSFCFVNSHLAAGASNVEQRNQDYKTILRALSFPERAELSQFDHDVVFWFGDLNFRLDSPSYEEVRRKISKKE 210 (310)
T ss_pred CcEEEEEeeccccccchhhhhHHHHHHHHHhcCCCCCccccccccceEEEecCcceeecCCCHHHHHHHHhhCc
Confidence 4579999999988877677898898888766531110 12357999999997544 23446665543
No 24
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.97 E-value=8.5e-05 Score=85.03 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=43.6
Q ss_pred ceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHh---hcCCCcEEEEccCCC---CCCChhHHhHhcCCCC
Q 007421 415 RQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIA---ASADIPMLVCGDFNS---VPGSAPHALLAMGKVE 481 (604)
Q Consensus 415 g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~---~~~~~pvIlcGDFNs---~p~S~~~~lL~~G~v~ 481 (604)
...||+++.||......-+.|-.-...+.+.|.=-. -.....|+.|||||- .++..|.+++..|.++
T Consensus 672 ~TsfCFv~SHlAAG~snv~ERn~DY~tI~r~l~Fp~Gr~I~~HD~ifW~GDFNYRI~l~nEEVr~~v~~~d~~ 744 (1080)
T KOG0566|consen 672 ATSFCFVCSHLAAGQSNVEERNEDYKTIARKLRFPRGRMIFSHDYIFWLGDFNYRIDLSNEEVRRLVRNQDLD 744 (1080)
T ss_pred cccEEEEecccccccchHhhhhhhHHHHHHhccccCCccccCCceEEEecccceeecCCHHHHHHHHHhccHH
Confidence 346999999998766554555555555555443110 012346999999995 5667788888877543
No 25
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=97.61 E-value=0.00011 Score=65.08 Aligned_cols=43 Identities=21% Similarity=0.192 Sum_probs=21.9
Q ss_pred ccccccCCCCcceeEEEEeCCCceeeeeeccCChhhhccCCCCCCCCCCCCcccEE
Q 007421 538 LFTHCTRDFIGTLDYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALL 593 (604)
Q Consensus 538 ~fTn~t~~f~~~LDYIf~s~~~l~v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~ 593 (604)
.+|.+...-..+||+||.+...+.. ...... .....|||.||+
T Consensus 77 ~~T~~~~~~~s~iD~~~~s~~~~~~-~~~~~~------------~~~~~SDH~~I~ 119 (119)
T PF14529_consen 77 PPTFISNSHGSRIDLILTSDNLLSW-CVWVIS------------SDDSGSDHCPIT 119 (119)
T ss_dssp --SEEECCCEE--EEEEEECCGCCC-EEEEEE------------TTSSSSSB--EE
T ss_pred CCcccCCCCCceEEEEEECChHHhc-CcEEEe------------CCCCCCCccCCC
Confidence 3666655558999999999883333 111111 123469999985
No 26
>PF01753 zf-MYND: MYND finger; InterPro: IPR002893 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MYND-type zinc finger domains. The MYND domain (myeloid, Nervy, and DEAF-1) is present in a large group of proteins that includes RP-8 (PDCD2), Nervy, and predicted proteins from Drosophila, mammals, Caenorhabditis elegans, yeast, and plants [, , ]. The MYND domain consists of a cluster of cysteine and histidine residues, arranged with an invariant spacing to form a potential zinc-binding motif []. Mutating conserved cysteine residues in the DEAF-1 MYND domain does not abolish DNA binding, which suggests that the MYND domain might be involved in protein-protein interactions []. Indeed, the MYND domain of ETO/MTG8 interacts directly with the N-CoR and SMRT co-repressors [, ]. Aberrant recruitment of co-repressor complexes and inappropriate transcriptional repression is believed to be a general mechanism of leukemogenesis caused by the t(8;21) translocations that fuse ETO with the acute myelogenous leukemia 1 (AML1) protein. ETO has been shown to be a co-repressor recruited by the promyelocytic leukemia zinc finger (PLZF) protein []. A divergent MYND domain present in the adenovirus E1A binding protein BS69 was also shown to interact with N-CoR and mediate transcriptional repression []. The current evidence suggests that the MYND motif in mammalian proteins constitutes a protein-protein interaction domain that functions as a co-repressor-recruiting interface. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3QWW_A 3QWV_A 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3RU0_A ....
Probab=96.72 E-value=0.0014 Score=46.34 Aligned_cols=34 Identities=26% Similarity=0.617 Sum_probs=28.1
Q ss_pred CCCCCCceeecchhhccCCCCCceeecChHHHHHhHHHHHH
Q 007421 67 VHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRV 107 (604)
Q Consensus 67 ~~~~~~~~l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~ 107 (604)
..|++++...|+.|. ..+|||.+|.+..|..||.
T Consensus 2 ~~C~~~~~~~C~~C~-------~~~YCs~~Cq~~~w~~Hk~ 35 (37)
T PF01753_consen 2 AVCGKPALKRCSRCK-------SVYYCSEECQRADWPYHKF 35 (37)
T ss_dssp TTTSSCSSEEETTTS-------SSEESSHHHHHHHHHHHCC
T ss_pred cCCCCCcCCcCCCCC-------CEEecCHHHHHHHHHHHhh
Confidence 567887777899882 2689999999999999874
No 27
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=96.17 E-value=0.015 Score=65.16 Aligned_cols=64 Identities=14% Similarity=0.190 Sum_probs=37.6
Q ss_pred ceeEEEEeeccccCCCCc--hhHHHHHHHHHHHHHH--Hhh-------cCCCcEEEEccCCCCCC---ChhHHhHhcC
Q 007421 415 RQLLCVANTHVNVHQELK--DVKLWQVHTLLKGLEK--IAA-------SADIPMLVCGDFNSVPG---SAPHALLAMG 478 (604)
Q Consensus 415 g~~l~V~NTHL~~~p~~~--~vR~~Q~~~Ll~~l~~--~~~-------~~~~pvIlcGDFNs~p~---S~~~~lL~~G 478 (604)
+..||++|+||.++.... ..|..+...+++.+.= ... .....+|++||||---+ ..+-+++.++
T Consensus 419 ~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRIdl~~~ev~~lI~~~ 496 (621)
T PLN03191 419 QSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNMLDTEVRKLVAQK 496 (621)
T ss_pred CcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccccCCHHHHHHHHhhc
Confidence 457999999998865432 2466666666654320 000 01236999999996433 3344455443
No 28
>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]
Probab=96.14 E-value=0.045 Score=57.93 Aligned_cols=63 Identities=19% Similarity=0.240 Sum_probs=38.9
Q ss_pred cccccccCCCCCCCCccccc-------cCCCCcceeEEEEeCCCceeeeeeccCChhhhccCCCCCCCCCCCCcccEEEE
Q 007421 523 MEHQRRRMDPTTNEPLFTHC-------TRDFIGTLDYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSSDHIALLAE 595 (604)
Q Consensus 523 ~~~~~~~~d~~~~~p~fTn~-------t~~f~~~LDYIf~s~~~l~v~~~~~~~~~~~~~~~~~lP~~~~pSDHipl~ae 595 (604)
++++.+.+.+.... .||-| .++-.+++||+.++...+....-. .-.+.+..+|||.|+.+.
T Consensus 265 ~iDt~r~~~~~~~~-~~t~Wk~~~~~r~~~~~~r~dy~~Vsk~~~n~~r~~-----------~Ic~r~~~gsdh~pi~~~ 332 (335)
T KOG1294|consen 265 LIDTYRELHKDQKK-AYTFWKYMPNGRQRGHGERCDYILVSKPGPNNGRRF-----------YICSRPIHGSDHCPITLE 332 (335)
T ss_pred ceeehhhhcCCccc-cccchhhccccccCCCCCceeEEEecCcCCCCCcee-----------eeecCccCCCCCCCeeee
Confidence 55666655543221 56655 357789999999998743222111 112233678999999999
Q ss_pred EE
Q 007421 596 FR 597 (604)
Q Consensus 596 f~ 597 (604)
|.
T Consensus 333 ~~ 334 (335)
T KOG1294|consen 333 FF 334 (335)
T ss_pred ec
Confidence 85
No 29
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=96.11 E-value=0.0052 Score=65.85 Aligned_cols=50 Identities=12% Similarity=0.233 Sum_probs=34.3
Q ss_pred eeEEEEeeccccCCCCchhHHHHHHHHHHHHHHH---hhcCCCcEEEEccCCC
Q 007421 416 QLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKI---AASADIPMLVCGDFNS 465 (604)
Q Consensus 416 ~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~---~~~~~~pvIlcGDFNs 465 (604)
..+|++|.||..+-...+.|....+.++..|.-- .-.....++++||||.
T Consensus 165 t~~cFv~shlaag~~N~eeR~~Dy~~I~~~i~f~~g~~I~~hdti~w~GDlNy 217 (460)
T COG5411 165 TSFCFVNSHLAAGVNNIEERIFDYRSIASNICFSRGLRIYDHDTIFWLGDLNY 217 (460)
T ss_pred CCcEEEecchhcccccHHHHHHHHHHHHHheecCCCceecccceEEEecccCc
Confidence 4599999999887666667777777666655421 0012345999999994
No 30
>COG5239 CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification]
Probab=96.07 E-value=0.0052 Score=64.31 Aligned_cols=82 Identities=23% Similarity=0.174 Sum_probs=61.9
Q ss_pred CceEEEEEEeeeecCCCCCCCCCceeEEEEeeccccCCCCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChh
Q 007421 392 DNVALIVVLEAKFSNQGADTPGKRQLLCVANTHVNVHQELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAP 471 (604)
Q Consensus 392 ~nval~~~Le~k~~~~~~~~~~~g~~l~V~NTHL~~~p~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~ 471 (604)
++.+..+.++. +.+ ++. -.+++++||++|+|-....|+.|...+++.+.+...-. .+.+||||||..|.+.+
T Consensus 121 ~~dGc~if~k~-~~~-----~sk-~~li~~~~~~f~~p~~~~er~r~t~~~lnri~e~~~~~-w~~l~~~l~n~e~gd~~ 192 (378)
T COG5239 121 KVDGCAIFLKR-FID-----SSK-LGLILAVTHLFWHPYGYYERFRQTYILLNRIGEKDNIA-WVCLFVGLFNKEPGDTP 192 (378)
T ss_pred ccceEEEEEEe-ccc-----cch-hhhhhhhhHhhcccceeehhhhHHHHHHHHHhhhhhcc-hhheeeeeccCCCCCce
Confidence 45666666665 221 111 25889999999999999999999999999888765332 67899999999999998
Q ss_pred HHhHhcCCCC
Q 007421 472 HALLAMGKVE 481 (604)
Q Consensus 472 ~~lL~~G~v~ 481 (604)
|-.++.-.++
T Consensus 193 ~va~Th~~w~ 202 (378)
T COG5239 193 YVANTHLPWD 202 (378)
T ss_pred eEEecccccc
Confidence 8777654443
No 31
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=92.11 E-value=0.46 Score=48.88 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=37.1
Q ss_pred ceeEEEEeeccccCCCC-----------chhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChh-HHhHh
Q 007421 415 RQLLCVANTHVNVHQEL-----------KDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAP-HALLA 476 (604)
Q Consensus 415 g~~l~V~NTHL~~~p~~-----------~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~-~~lL~ 476 (604)
+..|.++|+||+.+... ...|..-....+....... ....|+++.||||---+... ++.|.
T Consensus 79 ~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r~~~~~-~~~~~lF~fGDfNyRld~~~~~e~L~ 151 (356)
T PTZ00312 79 TVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAECSAFI-SPSDPLFIFGDFNVRLDGHNLLEWLK 151 (356)
T ss_pred CEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHHHhhcc-CCCCcEEEeccceeeeccccHHHHhc
Confidence 56799999999876432 2233333344443333332 24579999999998665433 45554
No 32
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=90.04 E-value=0.15 Score=52.04 Aligned_cols=47 Identities=17% Similarity=0.346 Sum_probs=34.4
Q ss_pred EEEEeeccccccccccCCCCCC-ceeecchhhccCCCCCceeecChHHHHHhHHHHHHHHH
Q 007421 51 YKWYRIQSDRKVAVCSVHPSEQ-ATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHD 110 (604)
Q Consensus 51 ~~w~r~~~~~~~~~c~~~~~~~-~~l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~ 110 (604)
-||+-. +..| ..||.+ |+-+|-.|.. ..||+|+|-|-.|-.||.+-+
T Consensus 313 qr~~~d-----~~fC-stCG~~ga~KrCs~CKa-------v~YCdqeCQk~hWf~HKK~C~ 360 (396)
T KOG1710|consen 313 QRIAAD-----CQFC-STCGHPGAKKRCSQCKA-------VAYCDQECQKFHWFIHKKVCS 360 (396)
T ss_pred ceeEEe-----cccc-cccCCCCccchhhhhHH-------HHHHHHHHHHhhhHHHHHHHH
Confidence 456543 3556 456654 5688998863 348999999999999998765
No 33
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=89.77 E-value=0.4 Score=49.30 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=44.9
Q ss_pred ceeEEEEeeccccCC-----------CCchhHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCCCChh-HHhHh
Q 007421 415 RQLLCVANTHVNVHQ-----------ELKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAP-HALLA 476 (604)
Q Consensus 415 g~~l~V~NTHL~~~p-----------~~~~vR~~Q~~~Ll~~l~~~~~~~~~pvIlcGDFNs~p~S~~-~~lL~ 476 (604)
++.+-.+|.||+.+- .+...|-.|+.+++++|.+... .+..+++.||||+.-+|.- ...|+
T Consensus 168 ~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~~~-~~~~~fVfGdfNfrLds~s~ln~l~ 240 (391)
T KOG1976|consen 168 GKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEEGL-RNDAIFVFGDFNFRLDSTSLLNYLA 240 (391)
T ss_pred CceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhhcc-CceEEEEecccccccchHHHHHHHh
Confidence 567999999996432 1455788899999998876533 2347899999999988754 45554
No 34
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=80.42 E-value=1.6 Score=34.35 Aligned_cols=33 Identities=27% Similarity=0.654 Sum_probs=24.6
Q ss_pred ecchhhccCCCCCceeecChHHHHHhHHHHHHHHH
Q 007421 76 QCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHD 110 (604)
Q Consensus 76 ~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~ 110 (604)
.||.|- .-|+ ...-|||++|=+..++.+|+..+
T Consensus 5 HC~~CG-~~Ip-~~~~fCS~~C~~~~~k~qk~~~~ 37 (59)
T PF09889_consen 5 HCPVCG-KPIP-PDESFCSPKCREEYRKRQKRMRK 37 (59)
T ss_pred cCCcCC-CcCC-cchhhhCHHHHHHHHHHHHHHHH
Confidence 477774 3343 24668999999999999998774
No 35
>PF04438 zf-HIT: HIT zinc finger; InterPro: IPR007529 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the HIT-type zinc finger, which contains 7 conserved cysteines and one histidine that can potentially coordinate two zinc atoms. It has been named after the first protein that originally defined the domain: the yeast HIT1 protein (P46973 from SWISSPROT) []. The HIT-type zinc finger displays some sequence similarities to the MYND-type zinc finger. The function of this domain is unknown but it is mainly found in nuclear proteins involved in gene regulation and chromatin remodeling. This domain is also found in the thyroid receptor interacting protein 3 (TRIP-3) Q15649 from SWISSPROT, that specifically interacts with the ligand binding domain of the thyroid receptor. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2YQP_A 2YQQ_A 1X4S_A.
Probab=68.69 E-value=4.5 Score=27.25 Aligned_cols=28 Identities=25% Similarity=0.632 Sum_probs=19.4
Q ss_pred ccccCCCCCCceeecchhhccCCCCCceeecChHHHH
Q 007421 63 AVCSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFS 99 (604)
Q Consensus 63 ~~c~~~~~~~~~l~cp~c~~~~~~~~~~~fc~q~Cfk 99 (604)
..| .-|+..+.-.||.|. .-+||-+|||
T Consensus 3 ~~C-~vC~~~~kY~Cp~C~--------~~~CSl~C~k 30 (30)
T PF04438_consen 3 KLC-SVCGNPAKYRCPRCG--------ARYCSLACYK 30 (30)
T ss_dssp EEE-TSSSSEESEE-TTT----------EESSHHHHH
T ss_pred CCC-ccCcCCCEEECCCcC--------CceeCcEeEC
Confidence 356 347888889999663 3399999997
No 36
>PRK00418 DNA gyrase inhibitor; Reviewed
Probab=59.16 E-value=5.8 Score=31.46 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=18.2
Q ss_pred ceeecchhhccCC---CCCceeecChHHHH
Q 007421 73 ATLQCLGCVKAKI---PVAKSYHCSPKCFS 99 (604)
Q Consensus 73 ~~l~cp~c~~~~~---~~~~~~fc~q~Cfk 99 (604)
.+..||+|.|.-. .....=|||+-|=.
T Consensus 5 ~~v~CP~C~k~~~w~~~~~~rPFCS~RCk~ 34 (62)
T PRK00418 5 ITVNCPTCGKPVEWGEISPFRPFCSKRCQL 34 (62)
T ss_pred ccccCCCCCCcccccCCCCcCCcccHHHHh
Confidence 3578999999742 11123499999964
No 37
>PRK01343 zinc-binding protein; Provisional
Probab=57.01 E-value=5.8 Score=30.89 Aligned_cols=25 Identities=28% Similarity=0.507 Sum_probs=18.2
Q ss_pred eeecchhhccCCCCCceeecChHHHH
Q 007421 74 TLQCLGCVKAKIPVAKSYHCSPKCFS 99 (604)
Q Consensus 74 ~l~cp~c~~~~~~~~~~~fc~q~Cfk 99 (604)
+..||+|.|.-.. ...-|||+-|=.
T Consensus 9 ~~~CP~C~k~~~~-~~rPFCS~RC~~ 33 (57)
T PRK01343 9 TRPCPECGKPSTR-EAYPFCSERCRD 33 (57)
T ss_pred CCcCCCCCCcCcC-CCCcccCHHHhh
Confidence 3679999887553 344599999965
No 38
>PF03884 DUF329: Domain of unknown function (DUF329); InterPro: IPR005584 The biological function of these short proteins is unknown, but they contain four conserved cysteines, suggesting that they all bind zinc. YacG (Q5X8H6 from SWISSPROT) from Escherichia coli has been shown to bind zinc and contains the structural motifs typical of zinc-binding proteins []. The conserved four cysteine motif in these proteins (-C-X(2)-C-X(15)-C-X(3)-C-) is not found in other zinc-binding proteins with known structures.; GO: 0008270 zinc ion binding; PDB: 1LV3_A.
Probab=53.73 E-value=5.5 Score=31.10 Aligned_cols=25 Identities=28% Similarity=0.378 Sum_probs=12.9
Q ss_pred eeecchhhccCCC---CCceeecChHHH
Q 007421 74 TLQCLGCVKAKIP---VAKSYHCSPKCF 98 (604)
Q Consensus 74 ~l~cp~c~~~~~~---~~~~~fc~q~Cf 98 (604)
+..||+|.|.-.. -...=|||+-|=
T Consensus 2 ~v~CP~C~k~~~~~~~n~~rPFCS~RCk 29 (57)
T PF03884_consen 2 TVKCPICGKPVEWSPENPFRPFCSERCK 29 (57)
T ss_dssp EEE-TTT--EEE-SSSSS--SSSSHHHH
T ss_pred cccCCCCCCeecccCCCCcCCcccHhhc
Confidence 4578888875442 122349999994
No 39
>KOG3612 consensus PHD Zn-finger protein [General function prediction only]
Probab=50.91 E-value=5.4 Score=44.31 Aligned_cols=39 Identities=28% Similarity=0.566 Sum_probs=29.2
Q ss_pred ccCCCCCCceeecchhhccCCCCCceeecChHHHHHhHHHHHHHHHhhh
Q 007421 65 CSVHPSEQATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHDRAA 113 (604)
Q Consensus 65 c~~~~~~~~~l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~~~~ 113 (604)
| .+|.++|-+-|= ...| |||-+|-...|..|++.-.+.+
T Consensus 530 C-~nC~~EAiy~CC--------WNTS-YCsveCQQ~HW~~H~ksCrrk~ 568 (588)
T KOG3612|consen 530 C-YNCLDEAIYHCC--------WNTS-YCSVECQQGHWPEHRKSCRRKK 568 (588)
T ss_pred H-HhhhHHHHHHhh--------cccc-ccCcchhhccchhHhhhhcccC
Confidence 6 677777776654 3234 6999999999999999776543
No 40
>COG3350 Uncharacterized conserved protein [Function unknown]
Probab=42.81 E-value=14 Score=28.26 Aligned_cols=11 Identities=36% Similarity=0.881 Sum_probs=8.8
Q ss_pred eeecChHHHHH
Q 007421 90 SYHCSPKCFSD 100 (604)
Q Consensus 90 ~~fc~q~Cfk~ 100 (604)
=|||||+|-..
T Consensus 28 YYFcse~~~~~ 38 (53)
T COG3350 28 YYFCSEECKEK 38 (53)
T ss_pred EEEeCHHHHHH
Confidence 58999999543
No 41
>PF02069 Metallothio_Pro: Prokaryotic metallothionein; InterPro: IPR000518 Metallothioneins (MT) are small proteins that bind heavy metals, such as zinc, copper, cadmium and nickel. They have a high content of cysteine residues that bind the metal ions through clusters of thiolate bonds [, , ]. An empirical classification into three classes was proposed by Kojima [], with class III MTs including atypical polypeptides composed of gamma-glutamylcysteinyl units. Class I and class II MTs (the proteinaceous sequences) have now been grouped into families of phylogenetically-related and thus alignable sequences. The MT superfamily is subdivided into families, subfamilies, subgroups, and isolated isoforms and alleles. The metallothionein superfamily comprises all polypeptides that resemble equine renal metallothionein in several respects [], e.g., low molecular weight; high metal content; amino acid composition with high Cys and low aromatic residue content; unique sequence with characteristic distribution of cysteines, and spectroscopic manifestations indicative of metal thiolate clusters. A MT family subsumes MTs that share particular sequence-specific features and are thought to be evolutionarily related. Fifteen MT families have been characterised, each family being identified by its number and its taxonomic range. Family 14 consists of prokaryota MTs. Its members are recognised by the sequence pattern K-C-A-C-x(2)-C-L-C.The taxonomic range of the members extends to cyanobacteria. Known characteristics are: 53 to 56 AAs; 9 conserved Cys; one conserved tyrosine residue; one conserved histidine residue; contain other unusual residues. ; GO: 0046872 metal ion binding; PDB: 1JJD_A.
Probab=41.61 E-value=14 Score=28.22 Aligned_cols=19 Identities=26% Similarity=0.530 Sum_probs=14.3
Q ss_pred ccCCCCCceeecChHHHHH
Q 007421 82 KAKIPVAKSYHCSPKCFSD 100 (604)
Q Consensus 82 ~~~~~~~~~~fc~q~Cfk~ 100 (604)
+..|.....+|||++|-..
T Consensus 20 ~~Ai~~dGk~YCS~aCA~g 38 (52)
T PF02069_consen 20 EEAIQKDGKYYCSEACANG 38 (52)
T ss_dssp TTSEESSS-EESSHHHHHT
T ss_pred hHhHHhCCEeeecHHHhcc
Confidence 5667678899999999654
No 42
>PF06467 zf-FCS: MYM-type Zinc finger with FCS sequence motif; InterPro: IPR010507 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. MYM-type zinc fingers were identified in MYM family proteins []. Human protein Q14202 from SWISSPROT is involved in a chromosomal translocation and may be responsible for X-linked retardation in XQ13.1 []. Q9UBW7 from SWISSPROT is also involved in disease. In myeloproliferative disorders it is fused to FGF receptor 1 []; in atypical myeloproliferative disorders it is rearranged []. Members of the family generally are involved in development. This Zn-finger domain functions as a transcriptional trans-activator of late vaccinia viral genes, and orthologues are also found in all nucleocytoplasmic large DNA viruses, NCLDV. This domain is also found fused to the C termini of recombinases from certain prokaryotic transposons []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2L8E_A 2DAS_A.
Probab=35.93 E-value=24 Score=25.20 Aligned_cols=12 Identities=33% Similarity=0.741 Sum_probs=9.9
Q ss_pred ceeecChHHHHH
Q 007421 89 KSYHCSPKCFSD 100 (604)
Q Consensus 89 ~~~fc~q~Cfk~ 100 (604)
.-.|||+.|...
T Consensus 31 ~~~FCS~~C~~~ 42 (43)
T PF06467_consen 31 MKQFCSQSCLSS 42 (43)
T ss_dssp TSCCSSHHHHHH
T ss_pred ccChhCHHHHhh
Confidence 467999999875
No 43
>COG3024 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.74 E-value=19 Score=28.62 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=17.4
Q ss_pred eeecchhhccCCC---CCceeecChHHHH
Q 007421 74 TLQCLGCVKAKIP---VAKSYHCSPKCFS 99 (604)
Q Consensus 74 ~l~cp~c~~~~~~---~~~~~fc~q~Cfk 99 (604)
+..||+|-|.-.- -...-|||+-|--
T Consensus 7 ~v~CP~Cgkpv~w~~~s~frPFCSkRCkl 35 (65)
T COG3024 7 TVPCPTCGKPVVWGEESPFRPFCSKRCKL 35 (65)
T ss_pred cccCCCCCCcccccccCCcCcchhHhhhh
Confidence 5678988886441 1345599999943
No 44
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=33.80 E-value=84 Score=32.86 Aligned_cols=48 Identities=13% Similarity=0.328 Sum_probs=26.2
Q ss_pred CceeEEEEeeccccCCCCchhHHHH-HHHHHHHHHHHhhcCCCc--EEEEccCCCCC
Q 007421 414 KRQLLCVANTHVNVHQELKDVKLWQ-VHTLLKGLEKIAASADIP--MLVCGDFNSVP 467 (604)
Q Consensus 414 ~g~~l~V~NTHL~~~p~~~~vR~~Q-~~~Ll~~l~~~~~~~~~p--vIlcGDFNs~p 467 (604)
..+.+++..+||. +-+..+ ++.+++..+........| +|+||+|.+.|
T Consensus 27 ~~~~VilSDV~LD------~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p 77 (291)
T PTZ00235 27 RHNWIIMHDVYLD------SPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLK 77 (291)
T ss_pred ceEEEEEEeeccC------CHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCc
Confidence 4455666777773 223332 333444443211112334 69999999998
No 45
>PF13824 zf-Mss51: Zinc-finger of mitochondrial splicing suppressor 51
Probab=24.64 E-value=1.3e+02 Score=23.37 Aligned_cols=31 Identities=35% Similarity=0.879 Sum_probs=21.5
Q ss_pred ceeecchhhccCCCCCceeecChHHHHHhHHHHHHHHH
Q 007421 73 ATLQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHRVLHD 110 (604)
Q Consensus 73 ~~l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk~~h~ 110 (604)
..+.||.| ||| ++||.+=.++....|+.+=.
T Consensus 13 v~~~Cp~c---Gip----thcS~ehw~~D~e~H~~~c~ 43 (55)
T PF13824_consen 13 VNFECPDC---GIP----THCSEEHWEDDYEEHRQLCE 43 (55)
T ss_pred cCCcCCCC---CCc----CccCHHHHHHhHHHHHHHHH
Confidence 35888854 885 57888777777677776443
No 46
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.41 E-value=20 Score=32.29 Aligned_cols=19 Identities=32% Similarity=0.536 Sum_probs=14.7
Q ss_pred ccccCCCCCCceeecchhhc
Q 007421 63 AVCSVHPSEQATLQCLGCVK 82 (604)
Q Consensus 63 ~~c~~~~~~~~~l~cp~c~~ 82 (604)
+-| .+||..+-+|||+|-.
T Consensus 29 afc-skcgeati~qcp~csa 47 (160)
T COG4306 29 AFC-SKCGEATITQCPICSA 47 (160)
T ss_pred HHH-hhhchHHHhcCCccCC
Confidence 337 6888887799998854
No 47
>COG4068 Uncharacterized protein containing a Zn-ribbon [Function unknown]
Probab=23.19 E-value=34 Score=26.71 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=18.8
Q ss_pred eecchhhccCCCCCceeecChHHHHHhHHHHH
Q 007421 75 LQCLGCVKAKIPVAKSYHCSPKCFSDAWQHHR 106 (604)
Q Consensus 75 l~cp~c~~~~~~~~~~~fc~q~Cfk~~w~~hk 106 (604)
-.|+.|-|.-=+ .--|||.+|-+--=++.|
T Consensus 9 ~HC~VCg~aIp~--de~~CSe~C~eil~ker~ 38 (64)
T COG4068 9 RHCVVCGKAIPP--DEQVCSEECGEILNKERK 38 (64)
T ss_pred ccccccCCcCCC--ccchHHHHHHHHHHHHHH
Confidence 357777665433 567999999854333333
No 48
>PF04181 RPAP2_Rtr1: Rtr1/RPAP2 family; InterPro: IPR007308 This entry represents a domain found in PAP2 (RNAP II associated polypeptide) protein and the yeast Rtr1 proteins. Its function is not known however it is thought to be a zinc finger.
Probab=22.88 E-value=43 Score=27.67 Aligned_cols=12 Identities=33% Similarity=0.863 Sum_probs=10.5
Q ss_pred eeecChHHHHHh
Q 007421 90 SYHCSPKCFSDA 101 (604)
Q Consensus 90 ~~fc~q~Cfk~~ 101 (604)
+.|||..||+.+
T Consensus 59 ~~fCS~~C~~~s 70 (79)
T PF04181_consen 59 SKFCSKDCYKAS 70 (79)
T ss_pred cCcCCHHHHHHH
Confidence 479999999975
No 49
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.30 E-value=1.1e+02 Score=28.08 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=30.0
Q ss_pred ceeEEEEeeccccCCCCchh-HHHHHHHHHHHHHHHhh-cCC---------CcEEEEccCCCCCCC
Q 007421 415 RQLLCVANTHVNVHQELKDV-KLWQVHTLLKGLEKIAA-SAD---------IPMLVCGDFNSVPGS 469 (604)
Q Consensus 415 g~~l~V~NTHL~~~p~~~~v-R~~Q~~~Ll~~l~~~~~-~~~---------~pvIlcGDFNs~p~S 469 (604)
+..++.++.|+..+-..... |..-...+.+.+.-... ... .-||..||+|.-..+
T Consensus 58 ~~~~~~v~~hl~~~~~~~~~~r~~d~~~i~~~~~~~~~~~~~~~~~~~~~~D~v~w~GDlN~Rl~~ 123 (145)
T KOG0565|consen 58 QTSFCFVISHLTSGVHKVYERRNEDYQEILNGLRFPSVSPASEPVISDGEHDTVIWLGDLNYRLSG 123 (145)
T ss_pred CceEEEEEecccccchhhHHHhhccHHHHHhhccccccCcccccccccccccEEEEecceeeeecC
Confidence 34699999999876554444 33323333322211100 011 247899999986553
No 50
>PF04945 YHS: YHS domain; InterPro: IPR007029 This short presumed domain is about 50 amino acid residues long. It often contains two cysteines that may be functionally important. This domain is found in copper transporting ATPases, some phenol hydroxylases and in a set of uncharacterised membrane proteins including Q9CNI0 from SWISSPROT. This domain is named after three of the most conserved amino acids it contains. The domain may be metal binding, possibly copper ions. This domain is duplicated in some copper transporting ATPases.; PDB: 3U52_B 2INN_A 2INP_B 1T0Q_A 2RDB_A 1T0R_A 2IND_A 1T0S_A 2INC_A 3DHI_A ....
Probab=22.05 E-value=43 Score=24.65 Aligned_cols=11 Identities=36% Similarity=0.812 Sum_probs=8.6
Q ss_pred eeecChHHHHH
Q 007421 90 SYHCSPKCFSD 100 (604)
Q Consensus 90 ~~fc~q~Cfk~ 100 (604)
=+|||++|-+.
T Consensus 25 Y~FCS~~C~~~ 35 (47)
T PF04945_consen 25 YYFCSEGCKEK 35 (47)
T ss_dssp EEESSHHHHHH
T ss_pred EEEcCHHHHHH
Confidence 57999999543
No 51
>KOG0808 consensus Carbon-nitrogen hydrolase [Amino acid transport and metabolism]
Probab=21.87 E-value=85 Score=32.06 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccchh
Q 007421 283 AYRRQNLLREIIGYRADIVCLQEVQND 309 (604)
Q Consensus 283 ~~R~~~I~~eI~~~~aDIIcLQEV~~~ 309 (604)
..|...|++.-....+.||||||...-
T Consensus 99 h~r~kaiieaaa~agvniiclqeawtm 125 (387)
T KOG0808|consen 99 HDRLKAIIEAAAVAGVNIICLQEAWTM 125 (387)
T ss_pred HHHHHHHHHHHHhcCccEEEeehhhcC
Confidence 356677777777789999999999653
No 52
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=21.48 E-value=82 Score=31.90 Aligned_cols=51 Identities=24% Similarity=0.445 Sum_probs=31.4
Q ss_pred ceeEEEEeeccccCCCCch----hHHHHHHHHHHHHHHHhhc-CCCcEEEEccCCC
Q 007421 415 RQLLCVANTHVNVHQELKD----VKLWQVHTLLKGLEKIAAS-ADIPMLVCGDFNS 465 (604)
Q Consensus 415 g~~l~V~NTHL~~~p~~~~----vR~~Q~~~Ll~~l~~~~~~-~~~pvIlcGDFNs 465 (604)
++.++|+-+||.+...... +=..|...+.+.+.++... ...-+|+.||+=-
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH 75 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKH 75 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 5579999999977543211 1112556666666655433 2346899999863
Done!