BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007423
(604 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 179/312 (57%), Gaps = 12/312 (3%)
Query: 282 IVKVKLADLLAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLS--EKQFRS 339
+ + L +L A+++F+ +NI+ G YK L D + +A+KRL + E QF++
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E+ + H NL+ L GFC+ ERLLVY +M NG++ S L LDW R
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKR 141
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSS 459
RI +G++RGLA+LH C P +H+ + + IL+D++F+A + DFGLA+L+ +D +
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 460 FVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVD 519
V G +G ++APEY ST +S K DV+G+G++LLEL++GQ+ D+A L+D
Sbjct: 202 AVRGTIG---HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 258
Query: 520 WVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMA 579
WV L+ + +VD L G D+E+ Q ++VA C S P +RP M +V M
Sbjct: 259 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV----RML 314
Query: 580 EKHGFSEPYDEF 591
E G +E ++E+
Sbjct: 315 EGDGLAERWEEW 326
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/310 (36%), Positives = 176/310 (56%), Gaps = 12/310 (3%)
Query: 284 KVKLADLLAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLS--EKQFRSEM 341
+ L +L A+++F +NI+ G YK L D +A+KRL + E QF++E+
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 342 NRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLR 401
+ H NL+ L GFC+ ERLLVY +M NG++ S L LDW R R
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKRQR 135
Query: 402 IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFV 461
I +G++RGLA+LH C P +H+ + + IL+D++F+A + DFGLA+L+ +D + V
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWV 521
G +G ++APEY ST +S K DV+G+G++LLEL++GQ+ D+A L+DWV
Sbjct: 196 RGXIG---HIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 522 NHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
L+ + +VD L G D+E+ Q ++VA C S P +RP M +V M E
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV----RMLEG 308
Query: 582 HGFSEPYDEF 591
G +E ++E+
Sbjct: 309 DGLAERWEEW 318
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 161/317 (50%), Gaps = 16/317 (5%)
Query: 253 GADSGKDDSSWIQVLRSHKLVQVSLFQKPIVKVKLADLLAATNSFAVENIIISTRTGVSY 312
G+ K +S L S LV ++ P+V DL ATN+F + +I G Y
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLV-----DLEEATNNFDHKFLIGHGVFGKVY 56
Query: 313 KAVLPDASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKH 371
K VL D + +A+KR + ++F +E+ L RHP+LV L+GFC E +L+YK+
Sbjct: 57 KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116
Query: 372 MPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVI 431
M NG L L+G+ + T+S + W RL I +GA+RGL +LH +H+ + S I
Sbjct: 117 MENGNLKRHLYGSDLP-TMS--MSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINI 170
Query: 432 LIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFG 491
L+D++F +ITDFG+++ D V G GY+ PEY + K DVY FG
Sbjct: 171 LLDENFVPKITDFGISKKGTELDQTHLXXVVK--GTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
+VL E+L + + + E NL +W G+ +VD +L + + + +F
Sbjct: 229 VVLFEVLCARSAIVQSLPREMV--NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFG 286
Query: 552 RVACSCVVSRPKDRPSM 568
A C+ +DRPSM
Sbjct: 287 DTAVKCLALSSEDRPSM 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 161/317 (50%), Gaps = 16/317 (5%)
Query: 253 GADSGKDDSSWIQVLRSHKLVQVSLFQKPIVKVKLADLLAATNSFAVENIIISTRTGVSY 312
G+ K +S L S LV ++ P+V DL ATN+F + +I G Y
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRVPLV-----DLEEATNNFDHKFLIGHGVFGKVY 56
Query: 313 KAVLPDASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKH 371
K VL D + +A+KR + ++F +E+ L RHP+LV L+GFC E +L+YK+
Sbjct: 57 KGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKY 116
Query: 372 MPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVI 431
M NG L L+G+ + T+S + W RL I +GA+RGL +LH +H+ + S I
Sbjct: 117 MENGNLKRHLYGSDLP-TMS--MSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINI 170
Query: 432 LIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFG 491
L+D++F +ITDFG+++ + + G GY+ PEY + K DVY FG
Sbjct: 171 LLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
+VL E+L + + + E NL +W G+ +VD +L + + + +F
Sbjct: 229 VVLFEVLCARSAIVQSLPREMV--NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFG 286
Query: 552 RVACSCVVSRPKDRPSM 568
A C+ +DRPSM
Sbjct: 287 DTAVKCLALSSEDRPSM 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 135/278 (48%), Gaps = 24/278 (8%)
Query: 309 GVSYKAVLPDASALAIKRLSA-----CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEE 363
GV YK + + + +A+K+L+A + ++QF E+ + + +H NLV LLGF +
Sbjct: 45 GVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 103
Query: 364 ERLLVYKHMPNGTLYSLLHGNGVDNTLSGV--LDWSTRLRIGMGASRGLAWLHHGCQPPY 421
+ LVY +MPNG+L L + L G L W R +I GA+ G+ +LH + +
Sbjct: 104 DLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHH 154
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ I S IL+D+ F A+I+DFGLAR S + +G Y+APE +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQTVMXXRIVGTTAYMAPEALRGEIT 212
Query: 482 SLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGR 541
K D+Y FG+VLLE+++G +D + L D +DK +
Sbjct: 213 P-KSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIKEEIEDEEKTIEDYIDKKM-ND 267
Query: 542 GNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMA 579
+ + VA C+ + RP + +V + L+ M
Sbjct: 268 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 135/278 (48%), Gaps = 24/278 (8%)
Query: 309 GVSYKAVLPDASALAIKRLSA-----CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEE 363
GV YK + + + +A+K+L+A + ++QF E+ + + +H NLV LLGF +
Sbjct: 45 GVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 103
Query: 364 ERLLVYKHMPNGTLYSLLHGNGVDNTLSGV--LDWSTRLRIGMGASRGLAWLHHGCQPPY 421
+ LVY +MPNG+L L + L G L W R +I GA+ G+ +LH + +
Sbjct: 104 DLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHH 154
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ I S IL+D+ F A+I+DFGLAR S + +G Y+APE +
Sbjct: 155 IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQTVMXSRIVGTTAYMAPEALRGEIT 212
Query: 482 SLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGR 541
K D+Y FG+VLLE+++G +D + L D +DK +
Sbjct: 213 P-KSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIKEEIEDEEKTIEDYIDKKM-ND 267
Query: 542 GNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMA 579
+ + VA C+ + RP + +V + L+ M
Sbjct: 268 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 134/278 (48%), Gaps = 24/278 (8%)
Query: 309 GVSYKAVLPDASALAIKRLSA-----CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEE 363
GV YK + + + +A+K+L+A + ++QF E+ + + +H NLV LLGF +
Sbjct: 39 GVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 97
Query: 364 ERLLVYKHMPNGTLYSLLHGNGVDNTLSGV--LDWSTRLRIGMGASRGLAWLHHGCQPPY 421
+ LVY +MPNG+L L + L G L W R +I GA+ G+ +LH + +
Sbjct: 98 DLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHH 148
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ I S IL+D+ F A+I+DFGLAR S +G Y+APE +
Sbjct: 149 IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQXVMXXRIVGTTAYMAPEALRGEIT 206
Query: 482 SLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGR 541
K D+Y FG+VLLE+++G +D + L D +DK +
Sbjct: 207 P-KSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIKEEIEDEEKTIEDYIDKKM-ND 261
Query: 542 GNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMA 579
+ + VA C+ + RP + +V + L+ M
Sbjct: 262 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 24/275 (8%)
Query: 309 GVSYKAVLPDASALAIKRLSA-----CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEE 363
GV YK + + + +A+K+L+A + ++QF E+ + +H NLV LLGF +
Sbjct: 36 GVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGD 94
Query: 364 ERLLVYKHMPNGTLYSLLHGNGVDNTLSGV--LDWSTRLRIGMGASRGLAWLHHGCQPPY 421
+ LVY + PNG+L L + L G L W R +I GA+ G+ +LH + +
Sbjct: 95 DLCLVYVYXPNGSLLDRL------SCLDGTPPLSWHXRCKIAQGAANGINFLH---ENHH 145
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ I S IL+D+ F A+I+DFGLAR S +G Y APE +
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFAQXVXXSRIVGTTAYXAPEALRGEIT 203
Query: 482 SLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGR 541
K D+Y FG+VLLE+++G +D + L D +DK
Sbjct: 204 P-KSDIYSFGVVLLEIITGLPAVDEHREPQLL---LDIKEEIEDEEKTIEDYIDKKX-ND 258
Query: 542 GNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLK 576
+ + VA C+ + RP + +V + L+
Sbjct: 259 ADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+F E+ + +LRHPN+V +G +V +++ G+LY LLH +G LD
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ----LD 135
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
RL + ++G+ +LH+ PP +H+ + S +L+D + ++ DFGL+RL S
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL 194
Query: 456 NDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
+ S G ++APE ++ K DVY FG++L EL + Q+P
Sbjct: 195 SSKSAA----GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 13/170 (7%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+F E+ + +LRHPN+V +G +V +++ G+LY LLH +G LD
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ----LD 135
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
RL + ++G+ +LH+ PP +H+ + S +L+D + ++ DFGL+RL
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA---- 190
Query: 456 NDSSFVHGDL--GEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
S F+ G ++APE ++ K DVY FG++L EL + Q+P
Sbjct: 191 --SXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 47 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 105
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 106 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 156
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 157 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 213
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 214 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 255
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 256 WKERPEDRPT----FDYLRSVLE 274
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ + Y+H+ + + IL+ D
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIE---ERNYIHRDLRAANILVSDTLS 147
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 148 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 205 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 246
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 247 WKERPEDRPT----FDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 39 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 97
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ + Y+H+ + + IL+ D
Sbjct: 98 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIE---ERNYIHRDLRAANILVSDTLS 148
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 149 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 205
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 206 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 247
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 248 WKERPEDRPT----FDYLRSVLE 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 40 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 98
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 99 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 149
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 150 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 206
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 207 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 248
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 249 WKERPEDRPT----FDYLRSVLE 267
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 44 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 102
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 153
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 154 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 211 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 252
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 253 WKERPEDRPT----FDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 46 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 104
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 105 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 155
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 156 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 212
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 213 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 254
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 255 WKERPEDRPT----FDYLRSVLE 273
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 34 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 92
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ + Y+H+ + + IL+ D
Sbjct: 93 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIE---ERNYIHRNLRAANILVSDTLS 143
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 144 CKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 200
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 201 THGRIP---------YPG----MTNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 242
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 243 WKERPEDRPT----FDYLRSVLE 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 147
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 148 CKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 205 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 246
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 247 WKERPEDRPT----FDYLRSVLE 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 44 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 102
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 103 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 153
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 154 CKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 210
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 211 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 252
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 253 WKERPEDRPT----FDYLRSVLE 271
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 43 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 101
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 102 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 152
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 153 CKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 209
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 210 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 251
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 252 WKERPEDRPT----FDYLRSVLE 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ + Y+H+ + + IL+ D
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIE---ERNYIHRDLRAANILVSDTLS 147
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 148 CKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 205 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 246
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 247 WKERPEDRPT----FDYLRSVLE 265
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 33 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 91
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ + Y+H+ + + IL+ D
Sbjct: 92 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIE---ERNYIHRDLRAANILVSDTLS 142
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 143 CKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 199
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 200 THGRIP---------YPG----MTNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 241
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 242 WKERPEDRPT----FDYLRSVLE 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 48 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 106
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 107 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 157
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E++
Sbjct: 158 CKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 214
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 215 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 256
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 257 WKERPEDRPT----FDYLRSVLE 275
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 37/263 (14%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+ +A+K L +S F +E N + QL+H LV L V +E ++ ++M NG+L
Sbjct: 38 TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVD 96
Query: 380 LLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
L +G+ T++ +LD + ++ + G+A++ Y+H+ + + IL+ D
Sbjct: 97 FLKTPSGIKLTINKLLDMAAQI------AEGMAFIEERN---YIHRDLRAANILVSDTLS 147
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGLARL+ + + + G + APE + ++K DV+ FGI+L E++
Sbjct: 148 CKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 499 S-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSC 557
+ G+ P + G N VI R + + +E+ Q +R+ C
Sbjct: 205 THGRIP---------YPGM----TNPEVIQNLERGY--RMVRPDNCPEELYQLMRL---C 246
Query: 558 VVSRPKDRPSMYQVYESLKSMAE 580
RP+DRP+ ++ L+S+ E
Sbjct: 247 WKERPEDRPT----FDYLRSVLE 265
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 26/287 (9%)
Query: 295 NSFAVENIIISTRTGVSYKA-VLPDASALAIKR--LSACKLSEKQFRSEMNRLGQLRHPN 351
+ + ++ +I S T V A P +AIKR L C+ S + E+ + Q HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLL-HGNGVDNTLSGVLDWSTRLRIGMGASRGL 410
+V VV++E LV K + G++ ++ H SGVLD ST I GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 411 AWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG-----SRDPNDSSFVHGDL 465
+LH Q +H+ + + IL+ +D +I DFG++ + +R+ +FV
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV---- 187
Query: 466 GEFGYVAPEYSSTMVA-SLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHL 524
G ++APE + K D++ FGI +EL +G P + L + L
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 247
Query: 525 VIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQV 571
+ ++++ K YG+ F ++ C+ P+ RP+ ++
Sbjct: 248 ETGVQDKEMLKK--YGKS-------FRKMISLCLQKDPEKRPTAAEL 285
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 26/287 (9%)
Query: 295 NSFAVENIIISTRTGVSYKA-VLPDASALAIKR--LSACKLSEKQFRSEMNRLGQLRHPN 351
+ + ++ +I S T V A P +AIKR L C+ S + E+ + Q HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLL-HGNGVDNTLSGVLDWSTRLRIGMGASRGL 410
+V VV++E LV K + G++ ++ H SGVLD ST I GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 411 AWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG-----SRDPNDSSFVHGDL 465
+LH Q +H+ + + IL+ +D +I DFG++ + +R+ +FV
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV---- 182
Query: 466 GEFGYVAPEYSSTMVA-SLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHL 524
G ++APE + K D++ FGI +EL +G P + L + L
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL 242
Query: 525 VIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQV 571
+ ++++ K YG+ F ++ C+ P+ RP+ ++
Sbjct: 243 ETGVQDKEMLKK--YGKS-------FRKMISLCLQKDPEKRPTAAEL 280
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 120/260 (46%), Gaps = 32/260 (12%)
Query: 321 ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K L + ++F E + +++HPNLV LLG C +E +V ++MP G L
Sbjct: 59 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 381 LHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDAR 440
L + + VL L + S + +L + ++H+ +++ L+ ++ +
Sbjct: 119 LRECNREEVTAVVL-----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVK 170
Query: 441 ITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+ DFGL+RL+ D+ H G + APE + S+K DV+ FG++L E+ +
Sbjct: 171 VADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
Query: 500 -GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCV 558
G P + G + V L+ G + + G ++ + +R +C
Sbjct: 227 YGMSP---------YPGIDLSQVYDLLEKGYRMEQPE------GCPPKVYELMR---ACW 268
Query: 559 VSRPKDRPSMYQVYESLKSM 578
P DRPS + +++ ++M
Sbjct: 269 KWSPADRPSFAETHQAFETM 288
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 41/266 (15%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+A+K + +SE +F E + +L HP LV G C E +V +++ NG L + L
Sbjct: 35 VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94
Query: 382 --HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
HG G L+ S L + G+A+L ++H+ +++ L+D D
Sbjct: 95 RSHGKG--------LEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCV 143
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+++DFG+ R V D +V +F + APE S K DV+ FGI++ E+
Sbjct: 144 KVSDFGMTRYV-----LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 498 LS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG-RGNDDEIMQFLRVAC 555
S G+ P D+ + N V+ S+ LY D I Q +
Sbjct: 199 FSLGKMPYDL-------------YTNSEVVLKVSQ---GHRLYRPHLASDTIYQIMY--- 239
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAEK 581
SC P+ RP+ Q+ S++ + EK
Sbjct: 240 SCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 272 LVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKR 326
V F+ P V + A L ATN +++ ++ + G S + LP ++AIK
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 327 LSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L S L
Sbjct: 81 LKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 384 NGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ T+ + +GM G + G+ +L Y+H+ +++ ILI+ + ++
Sbjct: 140 HDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKV 188
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGLAR++ DP + G + +PE + + DV+ +GIVL E++S G
Sbjct: 189 SDFGLARVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 501 QKP 503
++P
Sbjct: 248 ERP 250
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 33/280 (11%)
Query: 303 IISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE 362
I S + G+ + + +AIK + +SE+ F E + +L HP LV L G C+ +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 77
Query: 363 EERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM 422
LV++ M +G L L T G+ T L + + G+A+L C +
Sbjct: 78 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVAS 482
H+ +++ L+ ++ +++DFG+ R V S+ G + +PE S S
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---GTKFPVKWASPEVFSFSRYS 185
Query: 483 LKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG- 540
K DV+ FG+++ E+ S G+ P + E V + R LY
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--------VEDISTGFR--------LYKP 229
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R + Q + C RP+DRP+ ++ L +AE
Sbjct: 230 RLASTHVYQIMN---HCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 33/280 (11%)
Query: 303 IISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE 362
I S + G+ + + +AIK + +SE+ F E + +L HP LV L G C+ +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 363 EERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM 422
LV++ M +G L L T G+ T L + + G+A+L C +
Sbjct: 75 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVAS 482
H+ +++ L+ ++ +++DFG+ R V S+ G + +PE S S
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---GTKFPVKWASPEVFSFSRYS 182
Query: 483 LKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG- 540
K DV+ FG+++ E+ S G+ P + + N V+ S LY
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE-------------NRSNSEVVEDISTGF---RLYKP 226
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R + Q + C RP+DRP+ ++ L +AE
Sbjct: 227 RLASTHVYQIMN---HCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 33/280 (11%)
Query: 303 IISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE 362
I S + G+ + + +AIK + +SE+ F E + +L HP LV L G C+ +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 363 EERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM 422
LV++ M +G L L T G+ T L + + G+A+L C +
Sbjct: 73 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVAS 482
H+ +++ L+ ++ +++DFG+ R V S+ G + +PE S S
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---GTKFPVKWASPEVFSFSRYS 180
Query: 483 LKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG- 540
K DV+ FG+++ E+ S G+ P + + N V+ S LY
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYE-------------NRSNSEVVEDISTGF---RLYKP 224
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R + Q + C RP+DRP+ ++ L +AE
Sbjct: 225 RLASTHVYQIMN---HCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 143
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 200 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 244
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GKQ
Sbjct: 245 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKQ 291
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 120/280 (42%), Gaps = 33/280 (11%)
Query: 303 IISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE 362
I S + G+ + + +AIK + +SE F E + +L HP LV L G C+ +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 363 EERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM 422
LV++ M +G L L T G+ T L + + G+A+L C +
Sbjct: 95 APICLVFEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVAS 482
H+ +++ L+ ++ +++DFG+ R V S+ G + +PE S S
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---GTKFPVKWASPEVFSFSRYS 202
Query: 483 LKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG- 540
K DV+ FG+++ E+ S G+ P + + N V+ S LY
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYE-------------NRSNSEVVEDISTGF---RLYKP 246
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R + Q + C RP+DRP+ ++ L +AE
Sbjct: 247 RLASTHVYQIMN---HCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 22/178 (12%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
+ R E L+HPN++ L G C+ E LV + G L +L G + + ++
Sbjct: 51 ENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI--LV 108
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD--------ARITDFGL 446
+W+ ++ +RG+ +LH P +H+ + S+ ILI + +ITDFGL
Sbjct: 109 NWAVQI------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162
Query: 447 ARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
AR ++ G + ++APE + S DV+ +G++L ELL+G+ P
Sbjct: 163 AREWHRTTKMSAA------GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 313 KAVLPDASALAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYK 370
KA S +AIK L + ++F SE + +GQ HPN++ L G +++ +
Sbjct: 38 KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTE 97
Query: 371 HMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNV 430
M NG L S L N T V+ LR G + G+ +L + Y+H+ +++
Sbjct: 98 FMENGALDSFLRLNDGQFT---VIQLVGMLR---GIASGMRYL---AEMSYVHRDLAARN 148
Query: 431 ILIDDDFDARITDFGLARLV--GSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVY 488
IL++ + +++DFGL+R + S DP ++S + G + + APE + + D +
Sbjct: 149 ILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI-PIRWTAPEAIAFRKFTSASDAW 207
Query: 489 GFGIVLLELLS-GQKP 503
+GIV+ E++S G++P
Sbjct: 208 SYGIVMWEVMSFGERP 223
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 272 LVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKR 326
V F+ P V + A L ATN +++ ++ + G S + LP ++AIK
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 327 LSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L S L
Sbjct: 81 LKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 384 NGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ T+ + +GM G + G+ +L Y+H+ +++ ILI+ + ++
Sbjct: 140 HDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKV 188
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R++ DP + G + +PE + + DV+ +GIVL E++S G
Sbjct: 189 SDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 501 QKP 503
++P
Sbjct: 248 ERP 250
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 299 VENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGF 358
VE ++ GV KA A +AIK++ + + K F E+ +L ++ HPN+V L G
Sbjct: 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 359 CVVEEERLLVYKHMPNGTLYSLLHGNGV--DNTLSGVLDWSTRLRIGMGASRGLAWLHHG 416
C+ LV ++ G+LY++LHG T + + W + S+G+A+LH
Sbjct: 70 CL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC------LQCSQGVAYLHSM 121
Query: 417 CQPPYMHQYISS-NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY 475
+H+ + N++L+ +I DFG A + + N+ G ++APE
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-------GSAAWMAPEV 174
Query: 476 SSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
S K DV+ +GI+L E+++ +KP D G
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 207
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 322 LAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK L A + + F SE + +GQ HPN++ L G ++V ++M NG+L +
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 380 LLHGNGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
L + T+ + +GM G G+ +L Y+H+ +++ +L+D +
Sbjct: 140 FLRTHDGQFTIMQL--------VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNL 188
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+++DFGL+R++ DP+ + G + APE + S DV+ FG+V+ E+
Sbjct: 189 VCKVSDFGLSRVL-EDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 498 LS-GQKPL-------DVAGAEEGFK 514
L+ G++P ++ EEG++
Sbjct: 248 LAYGERPYWNMTNRDVISSVEEGYR 272
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 27/248 (10%)
Query: 267 LRSHKLVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--A 321
LR++ V F+ P V + A L ATN +++ ++ + G S + LP +
Sbjct: 19 LRTY--VDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+AIK L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
S L + T+ + +GM G + G+ +L Y+H+ +++ ILI+ +
Sbjct: 135 SFLRKHDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+++DFGL+R++ DP + G + +PE + + DV+ +GIVL E
Sbjct: 184 LVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE 242
Query: 497 LLS-GQKP 503
++S G++P
Sbjct: 243 VMSYGERP 250
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 26/223 (11%)
Query: 303 IISTRTGVSYKAVLPDASALAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFC 359
+ S R + K LP +AIK L +EKQ F E + +GQ HPN++ L G
Sbjct: 38 VCSGRLKLPGKRELP----VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVV 92
Query: 360 VVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQP 419
+ ++V ++M NG+L + L N T V+ LR G S G+ +L
Sbjct: 93 TKSKPVMIVTEYMENGSLDTFLKKNDGQFT---VIQLVGMLR---GISAGMKYL---SDM 143
Query: 420 PYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTM 479
Y+H+ +++ ILI+ + +++DFGL+R++ DP + G + APE +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 480 VASLKGDVYGFGIVLLELLS-GQKPL------DVAGA-EEGFK 514
+ DV+ +GIV+ E++S G++P DV A EEG++
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYR 245
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 299 VENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGF 358
VE ++ GV KA A +AIK++ + + K F E+ +L ++ HPN+V L G
Sbjct: 13 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 359 CVVEEERLLVYKHMPNGTLYSLLHGNGV--DNTLSGVLDWSTRLRIGMGASRGLAWLHHG 416
C+ LV ++ G+LY++LHG T + + W + S+G+A+LH
Sbjct: 71 CL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC------LQCSQGVAYLHSM 122
Query: 417 CQPPYMHQYISS-NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY 475
+H+ + N++L+ +I DFG A + + N+ G ++APE
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-------GSAAWMAPEV 175
Query: 476 SSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
S K DV+ +GI+L E+++ +KP D G
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG 208
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 25/243 (10%)
Query: 272 LVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKR 326
V F+ P V + A L ATN +++ ++ + G S + LP ++AIK
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 327 LSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L S L
Sbjct: 81 LKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 384 NGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ T+ + +GM G + G+ +L Y+H+ +++ ILI+ + ++
Sbjct: 140 HDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKV 188
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL R++ DP + G + +PE + + DV+ +GIVL E++S G
Sbjct: 189 SDFGLGRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 501 QKP 503
++P
Sbjct: 248 ERP 250
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 322 LAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK L A + + F SE + +GQ HPN++ L G ++V ++M NG+L +
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 380 LLHGNGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
L + T+ + +GM G G+ +L Y+H+ +++ +L+D +
Sbjct: 140 FLRTHDGQFTIMQL--------VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNL 188
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+++DFGL+R++ DP+ + G + APE + S DV+ FG+V+ E+
Sbjct: 189 VCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 498 LS-GQKPL-------DVAGAEEGFK 514
L+ G++P ++ EEG++
Sbjct: 248 LAYGERPYWNMTNRDVISSVEEGYR 272
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 33/280 (11%)
Query: 303 IISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE 362
I S + G+ + + +AIK + +SE+ F E + +L HP LV L G C+ +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 363 EERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM 422
LV + M +G L L T G+ T L + + G+A+L C +
Sbjct: 76 APICLVTEFMEHGCLSDYL------RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVAS 482
H+ +++ L+ ++ +++DFG+ R V S+ G + +PE S S
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST---GTKFPVKWASPEVFSFSRYS 183
Query: 483 LKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG- 540
K DV+ FG+++ E+ S G+ P + E V + R LY
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--------VEDISTGFR--------LYKP 227
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R + Q + C RP+DRP+ ++ L +AE
Sbjct: 228 RLASTHVYQIMN---HCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 318 DASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+++ +A+K L +S + F E N + L+H LV L EE ++ ++M G+L
Sbjct: 36 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L + G L ++D+S ++ + G+A++ + Y+H+ + + +L+ +
Sbjct: 96 LDFLKSDEGGKVLLPKLIDFSAQI------AEGMAYIE---RKNYIHRDLRAANVLVSES 146
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+I DFGLAR++ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 147 LMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYE 203
Query: 497 LLS 499
+++
Sbjct: 204 IVT 206
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 43/274 (15%)
Query: 323 AIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
AIKR+ A K + F E+ L +L HPN++ LLG C L ++ P+G L
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 380 LLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNV 430
L + + N+ + L L +RG+ +L Q ++H+ +++
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARN 169
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVY 488
IL+ +++ A+I DFGL+R +V +G ++A E + V + DV+
Sbjct: 170 ILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 489 GFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEI 547
+G++L E++S G P E ++ L R ++K L DDE+
Sbjct: 223 SYGVLLWEIVSLGGTPYCGMTCAELYE--------KLPQGYR----LEKPL---NCDDEV 267
Query: 548 MQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
+R C +P +RPS Q+ SL M E+
Sbjct: 268 YDLMR---QCWREKPYERPSFAQILVSLNRMLEE 298
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 143
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 200 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 244
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GK+
Sbjct: 245 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKR 291
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 31/266 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 95
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + + ++D I +RG+ +LH +H+ + SN I + +D
Sbjct: 96 HHLHASETKFEMKKLID------IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNT 146
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE + S + DVY FGIVL
Sbjct: 147 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 204
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 205 ELMTGQLPY----------SNINNRDQIIEMVGRGSLSPDLSKV-RSNCPKRMK--RLMA 251
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAEK 581
C+ + +RPS ++ ++ +A +
Sbjct: 252 ECLKKKRDERPSFPRILAEIEELARE 277
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 36/292 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 88 IIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 139
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLMT----GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 196 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 240
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGK 597
++ + +R +C P DRPS +++++ ++M ++ S DE GK
Sbjct: 241 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGK 286
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 138
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 195 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 239
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GK+
Sbjct: 240 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKR 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 39 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSL 96
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D S ++ GM + Y+H+ + + IL+ ++
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---------YVHRDLRAANILVGEN 147
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 148 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 497 LLS 499
L +
Sbjct: 205 LTT 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 132/266 (49%), Gaps = 34/266 (12%)
Query: 267 LRSHKLVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--A 321
LR++ V ++ P V + A L ATN +++ ++ + G S + LP +
Sbjct: 19 LRTY--VDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+AIK L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L
Sbjct: 76 VAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
S L + T+ + +GM G + G+ +L Y+H+ +++ ILI+ +
Sbjct: 135 SFLRKHDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+++DFGL+R++ DP + G + +PE + + DV+ +GIVL E
Sbjct: 184 LVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE 242
Query: 497 LLS-GQKPL------DVAGA-EEGFK 514
++S G++P DV A +EG++
Sbjct: 243 VMSYGERPYWEMSNQDVIKAVDEGYR 268
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 321 ALAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
++AIK L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L
Sbjct: 46 SVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 104
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
S L + T+ + +GM G + G+ +L Y+H+ +++ ILI+
Sbjct: 105 DSFLRKHDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 153
Query: 436 DFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLL 495
+ +++DFGL+R++ DP + G + +PE + + DV+ +GIVL
Sbjct: 154 NLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 496 ELLS-GQKPL------DVAGA-EEGFK 514
E++S G++P DV A +EG++
Sbjct: 213 EVMSYGERPYWEMSNQDVIKAVDEGYR 239
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 272 LVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKR 326
V ++ P V + A L ATN +++ ++ + G S + LP ++AIK
Sbjct: 22 FVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 327 LSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L S L
Sbjct: 81 LKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 384 NGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ T+ + +GM G + G+ +L Y+H+ +++ ILI+ + ++
Sbjct: 140 HDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKV 188
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R++ DP + G + +PE + + DV+ +GIVL E++S G
Sbjct: 189 SDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 501 QKP 503
++P
Sbjct: 248 ERP 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 99/197 (50%), Gaps = 17/197 (8%)
Query: 313 KAVLPDASALAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYK 370
KA S +AIK L + ++F SE + +GQ HPN++ L G +++ +
Sbjct: 36 KAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTE 95
Query: 371 HMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA-WLHHGCQPPYMHQYISSN 429
M NG L S L N T+ ++ G RG+A + + + Y+H+ +++
Sbjct: 96 FMENGALDSFLRLNDGQFTVIQLV----------GMLRGIASGMRYLAEMSYVHRDLAAR 145
Query: 430 VILIDDDFDARITDFGLARLV--GSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDV 487
IL++ + +++DFGL+R + S DP +S + G + + APE + + D
Sbjct: 146 NILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI-PIRWTAPEAIAFRKFTSASDA 204
Query: 488 YGFGIVLLELLS-GQKP 503
+ +GIV+ E++S G++P
Sbjct: 205 WSYGIVMWEVMSFGERP 221
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 138
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 195 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 239
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GK+
Sbjct: 240 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKR 286
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 127/255 (49%), Gaps = 32/255 (12%)
Query: 278 FQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKRLSACKL 332
++ P V + A L ATN +++ ++ + G S + LP ++AIK L
Sbjct: 26 YEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GY 83
Query: 333 SEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT 389
+EKQ F E + +GQ HPN++ L G + ++V ++M NG+L S L + T
Sbjct: 84 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 390 LSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
+ + +GM G + G+ +L Y+H+ +++ ILI+ + +++DFGL+
Sbjct: 144 VIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPL-- 504
R++ DP + G + +PE + + DV+ +GIVL E++S G++P
Sbjct: 193 RVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
Query: 505 ----DVAGA-EEGFK 514
DV A +EG++
Sbjct: 252 MSNQDVIKAVDEGYR 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 34/292 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 88 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 139
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDV 487
+ L+ ++ ++ DFGL+RL+ + + G + APE + S+K DV
Sbjct: 140 ARNCLVGENHLVKVADFGLSRLMTG---DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 488 YGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDE 546
+ FG++L E+ + G P + G + V L+ + + G ++
Sbjct: 197 WAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPEK 241
Query: 547 IMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
+ + +R +C P DRPS +++++ ++M ++ S DE GKQ
Sbjct: 242 VYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKQ 287
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 15/187 (8%)
Query: 321 ALAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
++AIK L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L
Sbjct: 63 SVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 121
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
S L + T V+ LR G + G+ +L Y+H+ +++ ILI+ +
Sbjct: 122 DSFLRKHDAQFT---VIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNL 172
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+++DFGL+R++ DP + G + +PE + + DV+ +GIVL E+
Sbjct: 173 VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 498 LS-GQKP 503
+S G++P
Sbjct: 232 MSYGERP 238
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 43/274 (15%)
Query: 323 AIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
AIKR+ A K + F E+ L +L HPN++ LLG C L ++ P+G L
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 380 LLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNV 430
L + + N+ + L L +RG+ +L Q ++H+ +++
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARN 162
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVY 488
IL+ +++ A+I DFGL+R +V +G ++A E + V + DV+
Sbjct: 163 ILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 215
Query: 489 GFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEI 547
+G++L E++S G P E ++ L R ++K L DDE+
Sbjct: 216 SYGVLLWEIVSLGGTPYCGMTCAELYE--------KLPQGYR----LEKPL---NCDDEV 260
Query: 548 MQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
+R C +P +RPS Q+ SL M E+
Sbjct: 261 YDLMR---QCWREKPYERPSFAQILVSLNRMLEE 291
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 16/182 (8%)
Query: 320 SALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTLY 378
+ +AIK L +S + F E + +L+H LV L + VV EE + +V ++M G+L
Sbjct: 34 TKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLL 91
Query: 379 SLLH-GNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
L G G L ++D + ++ GM + Y+H+ + S IL+ +
Sbjct: 92 DFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---------YIHRDLRSANILVGNGL 142
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+I DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L EL
Sbjct: 143 ICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 498 LS 499
++
Sbjct: 200 VT 201
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 131/294 (44%), Gaps = 36/294 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 290
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 291 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRNLA 342
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 343 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 398
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 399 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 443
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQD 599
++ + +R +C P DRPS +++++ ++M ++ S DE GK++
Sbjct: 444 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKEN 491
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 120/243 (49%), Gaps = 25/243 (10%)
Query: 272 LVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKR 326
V F+ P V + A L ATN +++ ++ + G S + LP ++AIK
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 327 LSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
L +EKQ F E + +GQ HPN++ L G + ++V ++M NG+L S L
Sbjct: 81 LKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
Query: 384 NGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ T+ + +GM G + G+ +L ++H+ +++ ILI+ + ++
Sbjct: 140 HDAQFTVIQL--------VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKV 188
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R++ DP + G + +PE + + DV+ +GIVL E++S G
Sbjct: 189 SDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 501 QKP 503
++P
Sbjct: 248 ERP 250
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 32 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIXIVTEYMSKGSL 89
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 90 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 140
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 141 LVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 197
Query: 497 LLS 499
L +
Sbjct: 198 LTT 200
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 307 RTGVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
+ G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
++ + M G L L + VL L + S + +L + ++H+
Sbjct: 85 YIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRD 136
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLK 484
+++ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG++L E+ + G P + G + V L+ + + G
Sbjct: 193 SDVWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GC 237
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
+++ + +R +C P DRPS +++++ ++M ++ S+
Sbjct: 238 PEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ +++ IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLAAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 43/274 (15%)
Query: 323 AIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
AIKR+ A K + F E+ L +L HPN++ LLG C L ++ P+G L
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 115
Query: 380 LLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNV 430
L + + N+ + L L +RG+ +L Q ++H+ +++
Sbjct: 116 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARN 172
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVY 488
IL+ +++ A+I DFGL+R +V +G ++A E + V + DV+
Sbjct: 173 ILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVW 225
Query: 489 GFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEI 547
+G++L E++S G P E ++ L R ++K L DDE+
Sbjct: 226 SYGVLLWEIVSLGGTPYCGMTCAELYE--------KLPQGYR----LEKPL---NCDDEV 270
Query: 548 MQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
+R C +P +RPS Q+ SL M E+
Sbjct: 271 YDLMR---QCWREKPYERPSFAQILVSLNRMLEE 301
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 322 LAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK L A + F SE + +GQ HPN++ L G + +++ ++M NG+L +
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 380 LLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
L N T V+ LR G G+ +L Y+H+ +++ IL++ +
Sbjct: 99 FLRKNDGRFT---VIQLVGMLR---GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVC 149
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG++R++ DP + G + APE + + DV+ +GIV+ E++S
Sbjct: 150 KVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
Query: 500 -GQKPL------DVAGA-EEGFK 514
G++P DV A EEG++
Sbjct: 209 YGERPYWDMSNQDVIKAIEEGYR 231
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 307 RTGVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
+ G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E
Sbjct: 25 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
++ + M G L L + VL L + S + +L + ++H+
Sbjct: 85 YIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRD 136
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLK 484
+++ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG++L E+ + G P + G + V L+ + + G
Sbjct: 193 SDVWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GC 237
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
+++ + +R +C P DRPS +++++ ++M ++ S+
Sbjct: 238 PEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 39 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSL 96
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D S ++ GM + Y+H+ + + IL+ ++
Sbjct: 97 LDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---------YVHRDLRAANILVGEN 147
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 148 LVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 497 LLS 499
L +
Sbjct: 205 LTT 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 322 LAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK L A + F SE + +GQ HPN++ L G + +++ ++M NG+L +
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 380 LLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
L N T V+ LR G G+ +L Y+H+ +++ IL++ +
Sbjct: 105 FLRKNDGRFT---VIQLVGMLR---GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVC 155
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG++R++ DP + G + APE + + DV+ +GIV+ E++S
Sbjct: 156 KVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
Query: 500 -GQKPL------DVAGA-EEGFK 514
G++P DV A EEG++
Sbjct: 215 YGERPYWDMSNQDVIKAIEEGYR 237
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 136
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G V L+ + + G +
Sbjct: 193 VWAFGVLLWEIATYGMSP---------YPGIDPSQVYELLEKDYRMERPE------GCPE 237
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GK+
Sbjct: 238 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKR 284
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 131/294 (44%), Gaps = 36/294 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 332
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 333 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRNLA 384
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 385 ARNCLVGENHLVKVADFGLSRLMTG----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 440
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 441 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 485
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQD 599
++ + +R +C P DRPS +++++ ++M ++ S DE GK++
Sbjct: 486 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKEN 533
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 36/294 (12%)
Query: 307 RTGVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
+ G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E
Sbjct: 27 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
++ + M G L L + VL L + S + +L + ++H+
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRD 138
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLK 484
+++ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG++L E+ + G P + G + V L+ + + G
Sbjct: 195 SDVWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GC 239
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGK 597
+++ + +R +C P DRPS +++++ ++M ++ S DE GK
Sbjct: 240 PEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGK 287
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+AIK L + +EKQ F SE + +GQ HPN++ L G +++ + M NG+L
Sbjct: 38 VAIKTLKS-GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 96
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
S L N T V+ LR G + G+ +L Y+H+ +++ IL++ +
Sbjct: 97 SFLRQNDGQFT---VIQLVGMLR---GIAAGMKYL---ADMNYVHRALAARNILVNSNLV 147
Query: 439 ARITDFGLARLV--GSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+++DFGL+R + + DP +S + G + + APE + DV+ +GIV+ E
Sbjct: 148 CKVSDFGLSRFLEDDTSDPTYTSALGGKI-PIRWTAPEAIQYRKFTSASDVWSYGIVMWE 206
Query: 497 LLS-GQKP 503
++S G++P
Sbjct: 207 VMSYGERP 214
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 36/294 (12%)
Query: 307 RTGVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
+ G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E
Sbjct: 38 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 97
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
++ + M G L L + VL L + S + +L + ++H+
Sbjct: 98 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRD 149
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLK 484
+++ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG++L E+ + G P + G + V L+ + + G
Sbjct: 206 SDVWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GC 250
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGK 597
+++ + +R +C P DRPS +++++ ++M ++ S DE GK
Sbjct: 251 PEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGK 298
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 36/292 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 140
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 141 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 197 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 241
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGK 597
++ + +R +C P DRPS +++++ ++M ++ S DE GK
Sbjct: 242 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGK 287
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 130/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRNLA 345
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 346 ARNCLVGENHLVKVADFGLSRLM----TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 402 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 446
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GK+
Sbjct: 447 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKR 493
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 35 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 92
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 93 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 143
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 144 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 200
Query: 497 LLS 499
L +
Sbjct: 201 LTT 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 31 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 88
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 89 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 139
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 140 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 196
Query: 497 LLS 499
L +
Sbjct: 197 LTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 33 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 90
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 91 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 141
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 142 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 497 LLS 499
L +
Sbjct: 199 LTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 33/281 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 136
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLM----TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G V L+ + + G +
Sbjct: 193 VWAFGVLLWEIATYGMSP---------YPGIDPSQVYELLEKDYRMERPE------GCPE 237
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
++ + +R +C P DRPS +++++ ++M ++ S+
Sbjct: 238 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 295 NSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVP 354
S +E + + + G + A + +A+K + +S + F +E N + L+H LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L V +E ++ + M G+L L + G L ++D+S ++ + G+A++
Sbjct: 75 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFI 127
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
Q Y+H+ + + IL+ +I DFGLAR++ + N+ + G + AP
Sbjct: 128 E---QRNYIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAP 181
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS 499
E + ++K DV+ FGI+L+E+++
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 26/207 (12%)
Query: 321 ALAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
++AIK L +EKQ F E + +GQ HPN++ L G + ++V + M NG+L
Sbjct: 46 SVAIKTLKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 104
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
S L + T+ + +GM G + G+ +L Y+H+ +++ ILI+
Sbjct: 105 DSFLRKHDAQFTVIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINS 153
Query: 436 DFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLL 495
+ +++DFGL+R++ DP + G + +PE + + DV+ +GIVL
Sbjct: 154 NLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 212
Query: 496 ELLS-GQKPL------DVAGA-EEGFK 514
E++S G++P DV A +EG++
Sbjct: 213 EVMSYGERPYWEMSNQDVIKAVDEGYR 239
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 265
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 316
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 317 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 497 LLS 499
L +
Sbjct: 374 LTT 376
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 25/237 (10%)
Query: 278 FQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKRLSACKL 332
++ P V + A L ATN +++ ++ + G S + LP ++AIK L
Sbjct: 28 YEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GY 85
Query: 333 SEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT 389
+EKQ F E + +GQ HPN++ L G + ++V + M NG+L S L + T
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 390 LSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
+ + +GM G + G+ +L Y+H+ +++ ILI+ + +++DFGL+
Sbjct: 146 VIQL--------VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
R++ DP + G + +PE + + DV+ +GIVL E++S G++P
Sbjct: 195 RVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 265
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 316
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 317 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 497 LLS 499
L +
Sbjct: 374 LTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVCEYMSKGSL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 129/293 (44%), Gaps = 36/293 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 136
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 137 ARNCLVGENHLVKVADFGLSRLM----TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G V L+ + + G +
Sbjct: 193 VWAFGVLLWEIATYGMSP---------YPGIDPSQVYELLEKDYRMERPE------GCPE 237
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGKQ 598
++ + +R +C P DRPS +++++ ++M ++ S DE GK+
Sbjct: 238 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGKR 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVMEYMSKGCL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 143
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT----GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 200 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 244
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
++ + +R +C P DRPS +++++ ++M ++
Sbjct: 245 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+AIK L + +EKQ F SE + +GQ HPN++ L G +++ + M NG+L
Sbjct: 64 VAIKTLKS-GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD 122
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
S L N T V+ LR G + G+ +L Y+H+ +++ IL++ +
Sbjct: 123 SFLRQNDGQFT---VIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLV 173
Query: 439 ARITDFGLARLV--GSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+++DFGL+R + + DP +S + G + + APE + DV+ +GIV+ E
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALGGKI-PIRWTAPEAIQYRKFTSASDVWSYGIVMWE 232
Query: 497 LLS-GQKP 503
++S G++P
Sbjct: 233 VMSYGERP 240
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + ++RH LV L + VV EE + +V ++M G+L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 143
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT----GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 200 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 244
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
++ + +R +C P DRPS +++++ ++M ++
Sbjct: 245 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G L
Sbjct: 42 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGCL 99
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 100 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 151 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 497 LLS 499
L +
Sbjct: 208 LTT 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 143
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 144 ARNCLVGENHLVKVADFGLSRLMT----GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 200 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 244
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
++ + +R +C P DRPS +++++ ++M ++
Sbjct: 245 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 142
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 143 ARNCLVGENHLVKVADFGLSRLMTG----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 199 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 243
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
++ + +R +C P DRPS +++++ ++M ++
Sbjct: 244 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 276
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 33/276 (11%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 138
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTG----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 195 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 239
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
++ + +R +C P DRPS +++++ ++M ++
Sbjct: 240 KVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 39/270 (14%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 107
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + + ++D I +RG+ +LH +H+ + SN I + +D
Sbjct: 108 HHLHASETKFEMKKLID------IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNT 158
Query: 439 ARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFG 491
+I DFGLA R GS S G ++APE + S + DVY FG
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
IVL EL++GQ P N+ + + + GR D S R N + M+
Sbjct: 213 IVLYELMTGQLPY----------SNINNRDQIIEMVGRGSLSPDLSKV-RSNCPKRMK-- 259
Query: 552 RVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
R+ C+ + +RPS ++ ++ +A +
Sbjct: 260 RLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 39/270 (14%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + +V + +LY
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLY 107
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + + ++D I +RG+ +LH +H+ + SN I + +D
Sbjct: 108 HHLHASETKFEMKKLID------IARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNT 158
Query: 439 ARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFG 491
+I DFGLA R GS S G ++APE + S + DVY FG
Sbjct: 159 VKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
IVL EL++GQ P N+ + + + GR D S R N + M+
Sbjct: 213 IVLYELMTGQLPY----------SNINNRDQIIEMVGRGSLSPDLSKV-RSNCPKRMK-- 259
Query: 552 RVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
R+ C+ + +RPS ++ ++ +A +
Sbjct: 260 RLMAECLKKKRDERPSFPRILAEIEELARE 289
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 295 NSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVP 354
S +E + + + G + A + +A+K + +S + F +E N + L+H LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L V +E ++ + M G+L L + G L ++D+S ++ + G+A++
Sbjct: 248 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFI 300
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
Q Y+H+ + + IL+ +I DFGLAR++ + N+ + G + AP
Sbjct: 301 E---QRNYIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAP 354
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS 499
E + ++K DV+ FGI+L+E+++
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 122/273 (44%), Gaps = 33/273 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLL 367
G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 368 VYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
+ + M G L L + VL L + S + +L + ++H+ ++
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRDLA 138
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGD 486
+ L+ ++ ++ DFGL+RL+ D+ H G + APE + S+K D
Sbjct: 139 ARNCLVGENHLVKVADFGLSRLMTG----DTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P + G + V L+ + + G +
Sbjct: 195 VWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCPE 239
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSM 578
++ + +R +C P DRPS +++++ ++M
Sbjct: 240 KVYELMR---ACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 291 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 348
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 349 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 399
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 400 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 456
Query: 497 LLS 499
L +
Sbjct: 457 LTT 459
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 208 TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVGEYMSKGSL 265
Query: 378 YSLLHG-NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 266 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 316
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGLARL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 317 LVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 497 LLS 499
L +
Sbjct: 374 LTT 376
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 32/229 (13%)
Query: 293 ATNSFAVENIIISTRTGVSYKA-VLPDASALAIKRL------SACKLSEK--QFRSEMNR 343
A N E I G+ +K ++ D S +AIK L ++ EK +F+ E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 344 LGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIG 403
+ L HPN+V L G ++ +V + +P G LY L +D + + WS +LR+
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRL----LDK--AHPIKWSVKLRLM 128
Query: 404 MGASRGLAWLHHGCQPPYMHQYI-SSNVILIDDDFDA----RITDFGLARLVGSRDPNDS 458
+ + G+ ++ + PP +H+ + S N+ L D +A ++ DFGL++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-------QSV 180
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASL--KGDVYGFGIVLLELLSGQKPLD 505
V G LG F ++APE S K D Y F ++L +L+G+ P D
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 34/293 (11%)
Query: 307 RTGVSYKAVLPDAS-ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
+ G Y+ V S +A+K L + ++F E + +++HPNLV LLG C E
Sbjct: 27 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 86
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
++ + M G L L + VL L + S + +L + ++H+
Sbjct: 87 YIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLE---KKNFIHRD 138
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
+++ L+ ++ ++ DFGL+RL+ + + G + APE + S+K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG---DTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 486 DVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGND 544
DV+ FG++L E+ + G P + G + V L+ + + G
Sbjct: 196 DVWAFGVLLWEIATYGMSP---------YPGIDLSQVYELLEKDYRMERPE------GCP 240
Query: 545 DEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSEPYDEFPMIFGK 597
+++ + +R +C P DRPS +++++ ++M ++ S DE GK
Sbjct: 241 EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQESSIS---DEVEKELGK 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 13/183 (7%)
Query: 318 DASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+++ +A+K L +S + F E N + L+H LV L EE ++ + M G+L
Sbjct: 35 NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL 94
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L + G L ++D+S ++ + G+A++ + Y+H+ + + +L+ +
Sbjct: 95 LDFLKSDEGGKVLLPKLIDFSAQI------AEGMAYIE---RKNYIHRDLRAANVLVSES 145
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+I DFGLAR++ + N+ + G + APE + ++K +V+ FGI+L E
Sbjct: 146 LMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYE 202
Query: 497 LLS 499
+++
Sbjct: 203 IVT 205
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 33/260 (12%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE+ F E + +L HP LV L G C+ + LV++ M +G L L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 93
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
T G+ T L + + G+A+L + +H+ +++ L+ ++ ++
Sbjct: 94 ------RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKV 144
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFG+ R V S+ G + +PE S S K DV+ FG+++ E+ S G
Sbjct: 145 SDFGMTRFVLDDQYTSST---GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG 201
Query: 501 QKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG-RGNDDEIMQFLRVACSCVV 559
+ P + + N V+ S LY R + Q + C
Sbjct: 202 KIPYE-------------NRSNSEVVEDISTGF---RLYKPRLASTHVYQIMN---HCWK 242
Query: 560 SRPKDRPSMYQVYESLKSMA 579
RP+DRP+ ++ L ++A
Sbjct: 243 ERPEDRPAFSRLLRQLAAIA 262
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 300 ENIIISTRTGVSYKAVLPDASA-----LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPN 351
+ +I + G YK +L +S +AIK L A +EKQ F E +GQ H N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHN 107
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L G + +++ ++M NG L L D S VL LR G + G+
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREK--DGEFS-VLQLVGMLR---GIAAGMK 161
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
+L Y+H+ +++ IL++ + +++DFGL+R++ DP + G +
Sbjct: 162 YL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWT 217
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
APE S + DV+ FGIV+ E+++ G++P
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTL 377
+ +AIK L +S + F E + +LRH LV L + VV EE + +V ++M G+L
Sbjct: 209 TTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSL 266
Query: 378 YSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L G G L ++D + ++ GM + Y+H+ + + IL+ ++
Sbjct: 267 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---------YVHRDLRAANILVGEN 317
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
++ DFGL RL+ + N+ + G + APE + ++K DV+ FGI+L E
Sbjct: 318 LVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 374
Query: 497 LLS 499
L +
Sbjct: 375 LTT 377
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 25/243 (10%)
Query: 272 LVQVSLFQKPIVKV-KLADLLAATNSFAVENIIISTRTG--VSYKAVLPDAS--ALAIKR 326
V F+ P V + A L ATN +++ ++ + G S + LP ++AIK
Sbjct: 22 FVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKT 80
Query: 327 LSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
L +EKQ F E + +GQ HPN++ L G + ++V + M NG+L S L
Sbjct: 81 LKV-GYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK 139
Query: 384 NGVDNTLSGVLDWSTRLRIGM--GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ T+ + +GM G + G+ +L +H+ +++ ILI+ + ++
Sbjct: 140 HDAQFTVIQL--------VGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKV 188
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R++ DP + G + +PE + + DV+ +GIVL E++S G
Sbjct: 189 SDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 501 QKP 503
++P
Sbjct: 248 ERP 250
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 322 LAIKRLSA--CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK L A + F SE + +GQ HPN++ L G + +++ ++M NG+L +
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 380 LLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
L N D + V+ LR G G+ +L +H+ +++ IL++ +
Sbjct: 120 FLRKN--DGRFT-VIQLVGMLR---GIGSGMKYLSDMSA---VHRDLAARNILVNSNLVC 170
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG++R++ DP + G + APE + + DV+ +GIV+ E++S
Sbjct: 171 KVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
Query: 500 -GQKPL------DVAGA-EEGFK 514
G++P DV A EEG++
Sbjct: 230 YGERPYWDMSNQDVIKAIEEGYR 252
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 91
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 92 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 142
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 143 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 201 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 247
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 248 ECLKKKRDERPLFPQILASIELLAR 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 93
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 94 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 144
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 145 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 202
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 203 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 249
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 250 ECLKKKRDERPLFPQILASIELLAR 274
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 96
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 97 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 147
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 148 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 205
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 206 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 252
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 253 ECLKKKRDERPLFPQILASIELLAR 277
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 96
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 97 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 147
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 148 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 205
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 206 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 252
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 253 ECLKKKRDERPLFPQILASIELLAR 277
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + +V + +LY
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLY 91
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 92 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 142
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 143 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 201 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 247
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 248 ECLKKKRDERPLFPQILASIELLAR 272
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 293 ATNSFAVENIIISTRTGVSYKA-VLPDASALAIKRL------SACKLSEK--QFRSEMNR 343
A N E I G+ +K ++ D S +AIK L ++ EK +F+ E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 344 LGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIG 403
+ L HPN+V L G ++ +V + +P G LY L +D + + WS +LR+
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRL----LDK--AHPIKWSVKLRLM 128
Query: 404 MGASRGLAWLHHGCQPPYMHQYISS-NVILIDDDFDA----RITDFGLARLVGSRDPNDS 458
+ + G+ ++ + PP +H+ + S N+ L D +A ++ DFG ++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-------QSV 180
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASL--KGDVYGFGIVLLELLSGQKPLD 505
V G LG F ++APE S K D Y F ++L +L+G+ P D
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 30/233 (12%)
Query: 291 LAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHP 350
L S + I R G +KA L + +A+K Q E+ ++H
Sbjct: 11 LVPRGSLQLLEIKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIFSTPGMKHE 69
Query: 351 NLVPLLGF----CVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGA 406
NL+ + +E E L+ G+L L GN ++ W+ +
Sbjct: 70 NLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN--------IITWNELCHVAETM 121
Query: 407 SRGLAWLHH--------GCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSRDPND 457
SRGL++LH G +P H+ S +L+ D A + DFGLA R + P D
Sbjct: 122 SRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGD 181
Query: 458 SSFVHGDLGEFGYVAPEYSSTMV-----ASLKGDVYGFGIVLLELLSGQKPLD 505
+ HG +G Y+APE + A L+ D+Y G+VL EL+S K D
Sbjct: 182 T---HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 119
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 120 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 170
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 171 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 228
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 229 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 275
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 276 ECLKKKRDERPLFPQILASIELLAR 300
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 31/265 (11%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 118
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 119 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 169
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFGIVLL 495
+I DFGLA V SR F G ++APE S + DVY FGIVL
Sbjct: 170 VKIGDFGLA-TVKSRWSGSHQFEQLS-GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 227
Query: 496 ELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
EL++GQ P N+ + + + GR D S R N + M+ R+
Sbjct: 228 ELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK--RLMA 274
Query: 556 SCVVSRPKDRPSMYQVYESLKSMAE 580
C+ + +RP Q+ S++ +A
Sbjct: 275 ECLKKKRDERPLFPQILASIELLAR 299
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 293 ATNSFAVENIIISTRTGVSYKA-VLPDASALAIKRL------SACKLSEK--QFRSEMNR 343
A N E I G+ +K ++ D S +AIK L ++ EK +F+ E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 344 LGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIG 403
+ L HPN+V L G ++ +V + +P G LY L +D + + WS +LR+
Sbjct: 77 MSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRL----LDK--AHPIKWSVKLRLM 128
Query: 404 MGASRGLAWLHHGCQPPYMHQYI-SSNVILIDDDFDA----RITDFGLARLVGSRDPNDS 458
+ + G+ ++ + PP +H+ + S N+ L D +A ++ DF L++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-------QSV 180
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASL--KGDVYGFGIVLLELLSGQKPLD 505
V G LG F ++APE S K D Y F ++L +L+G+ P D
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 321 ALAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
A+AIK L +EKQ F E + +GQ HPN+V L G + ++V + M NG L
Sbjct: 73 AVAIKTLKV-GYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
+ L + T V+ LR G + G+ +L Y+H+ +++ IL++ +
Sbjct: 132 DAFLRKHDGQFT---VIQLVGMLR---GIAAGMRYL---ADMGYVHRDLAARNILVNSNL 182
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+++DFGL+R++ DP G + APE + DV+ +GIV+ E+
Sbjct: 183 VCKVSDFGLSRVI-EDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
Query: 498 LS-GQKPL------DVAGA-EEGFK 514
+S G++P DV A EEG++
Sbjct: 242 MSYGERPYWDMSNQDVIKAIEEGYR 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 295 NSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVP 354
S +E + + + G + A + +A+K + +S + F +E N + L+H LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L V +E ++ + M G+L L + G L ++D+S ++ + G+A++
Sbjct: 242 LHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAFI 294
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
Q Y+H+ + + IL+ +I DFGLAR VG++ P + AP
Sbjct: 295 E---QRNYIHRDLRAANILVSASLVCKIADFGLAR-VGAKFP------------IKWTAP 338
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS 499
E + ++K DV+ FGI+L+E+++
Sbjct: 339 EAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVE--EERLLVYKHMPNGTLYSLLHGNGVDNTLSG 392
+ F E RL HPN++P+LG C L+ MP G+LY++LH +
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT-----NF 106
Query: 393 VLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGS 452
V+D S ++ + +RG+A+L H +P ++S ++ID+D ARI+
Sbjct: 107 VVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARIS---------M 156
Query: 453 RDPNDSSFVHGDLGEFGYVAPEYSSTM---VASLKGDVYGFGIVLLELLSGQKPL-DVAG 508
D S G + +VAPE D++ F ++L EL++ + P D++
Sbjct: 157 ADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN 216
Query: 509 AEEGFK 514
E G K
Sbjct: 217 MEIGMK 222
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 91
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 92 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 142
Query: 439 ARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFG 491
+I DFGLA R GS S G ++APE S + DVY FG
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
IVL EL++GQ P N+ + + + GR D S R N + M+
Sbjct: 197 IVLYELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK-- 243
Query: 552 RVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R+ C+ + +RP Q+ S++ +A
Sbjct: 244 RLMAECLKKKRDERPLFPQILASIELLAR 272
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 111
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 112 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 162
Query: 439 ARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFG 491
+I DFGLA R GS S G ++APE S + DVY FG
Sbjct: 163 VKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDKNPYSFQSDVYAFG 216
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
IVL EL++GQ P N+ + + + GR D S R N + M+
Sbjct: 217 IVLYELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK-- 263
Query: 552 RVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R+ C+ + +RP Q+ S++ +A
Sbjct: 264 RLMAECLKKKRDERPLFPQILASIELLAR 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 135 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 180
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 181 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 39/269 (14%)
Query: 322 LAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K L+ + +Q F++E+ L + RH N++ +G+ + + +V + +LY
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLY 119
Query: 379 SLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFD 438
LH + ++D I ++G+ +LH +H+ + SN I + +D
Sbjct: 120 HHLHIIETKFEMIKLID------IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLT 170
Query: 439 ARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE---YSSTMVASLKGDVYGFG 491
+I DFGLA R GS S G ++APE S + DVY FG
Sbjct: 171 VKIGDFGLATEKSRWSGSHQFEQLS------GSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
IVL EL++GQ P N+ + + + GR D S R N + M+
Sbjct: 225 IVLYELMTGQLPY----------SNINNRDQIIFMVGRGYLSPDLSKV-RSNCPKAMK-- 271
Query: 552 RVACSCVVSRPKDRPSMYQVYESLKSMAE 580
R+ C+ + +RP Q+ S++ +A
Sbjct: 272 RLMAECLKKKRDERPLFPQILASIELLAR 300
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 137 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 182
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 183 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 137 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 182
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 183 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 138 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 183
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 184 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 195
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 196 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 241
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 142 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 187
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 188 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLAR + ++
Sbjct: 136 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
G ++A E T + K DV+ FG++L EL++ P
Sbjct: 187 XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 138 GF------GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 183
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D F VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 184 MLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 155
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 156 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 201
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 202 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 133
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 134 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 179
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 180 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 128
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 129 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 174
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 175 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 137 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 182
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 183 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 136 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 181
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 182 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 135 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 180
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 181 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 137 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 182
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 183 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 307 RTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGF----CVVE 362
R G +KA L + +A+K Q E+ L ++H N++ +G V+
Sbjct: 36 RFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 363 EERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHH------- 415
+ L+ G+L L N V+ W+ I +RGLA+LH
Sbjct: 95 VDLWLITAFHEKGSLSDFLKAN--------VVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 416 GCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPE 474
G +P H+ I S +L+ ++ A I DFGLA + + D+ HG +G Y+APE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT---HGQVGTRRYMAPE 203
Query: 475 YSSTMV-----ASLKGDVYGFGIVLLELLS 499
+ A L+ D+Y G+VL EL S
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 154
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 155 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 200
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 201 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 20/174 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEE-ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
QF +E + HPN++ LLG C+ E L+V +M +G L + + + T+ ++
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ G+ ++G+ +L ++H+ +++ ++D+ F ++ DFGLA RD
Sbjct: 132 GF------GLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLA-----RD 177
Query: 455 PNDSSF--VHGDLGE---FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + VH G ++A E T + K DV+ FG++L EL++ P
Sbjct: 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 333 SEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLS 391
+ + F +E + + QLRH NLV LLG V E+ L +V ++M G+L L G
Sbjct: 48 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-----R 102
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
VL L+ + + +L ++H+ +++ +L+ +D A+++DFGL +
Sbjct: 103 SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
Query: 452 SRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
S D G+ + APE S K DV+ FGI+L E+ S
Sbjct: 160 STQ---------DTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 41/221 (18%)
Query: 310 VSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LV 368
V+ K + DA+A A F +E + + QLRH NLV LLG V E+ L +V
Sbjct: 219 VAVKCIKNDATAQA-------------FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 369 YKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISS 428
++M G+L L G VL L+ + + +L ++H+ +++
Sbjct: 266 TEYMAKGSLVDYLRSRG-----RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAA 317
Query: 429 NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGD 486
+L+ +D A+++DFGL + S D G+ + APE S K D
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASSTQ---------DTGKLPVKWTAPEALREKKFSTKSD 368
Query: 487 VYGFGIVLLELLS-GQKPLD-------VAGAEEGFKGNLVD 519
V+ FGI+L E+ S G+ P V E+G+K + D
Sbjct: 369 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 409
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 28/198 (14%)
Query: 333 SEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLS 391
+ + F +E + + QLRH NLV LLG V E+ L +V ++M G+L L G
Sbjct: 42 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-----R 96
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
VL L+ + + +L ++H+ +++ +L+ +D A+++DFGL +
Sbjct: 97 SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
Query: 452 SRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLD--- 505
S D G+ + APE S K DV+ FGI+L E+ S G+ P
Sbjct: 154 STQ---------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204
Query: 506 ----VAGAEEGFKGNLVD 519
V E+G+K + D
Sbjct: 205 LKDVVPRVEKGYKMDAPD 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 40/253 (15%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+F E L Q HPN+V L+G C ++ +V + + G + L G L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR------LR 211
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
T L++ A+ G+ +L C +H+ +++ L+ + +I+DFG+ SR+
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGM-----SREE 263
Query: 456 NDSSF-VHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
D + G L + + APE + S + DV+ FGI+L E S G P
Sbjct: 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP------ 317
Query: 512 GFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM--QFLRVACSCVVSRPKDRPSMY 569
NL + ++R+ V+K GR E+ R+ C P RPS
Sbjct: 318 ----NLSN--------QQTREFVEKG--GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFS 363
Query: 570 QVYESLKSMAEKH 582
+Y+ L+S+ ++H
Sbjct: 364 TIYQELQSIRKRH 376
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 20/170 (11%)
Query: 333 SEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLS 391
+ + F +E + + QLRH NLV LLG V E+ L +V ++M G+L L G
Sbjct: 57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG-----R 111
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
VL L+ + + +L ++H+ +++ +L+ +D A+++DFGL +
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
Query: 452 SRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
S D G+ + APE S K DV+ FGI+L E+ S
Sbjct: 169 STQ---------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 38/252 (15%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+F E L Q HPN+V L+G C ++ +V + + G + L G L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR------LR 211
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
T L++ A+ G+ +L C +H+ +++ L+ + +I+DFG++R +
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEA 264
Query: 456 NDSSFVHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEG 512
+ G L + + APE + S + DV+ FGI+L E S G P
Sbjct: 265 DGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYP------- 317
Query: 513 FKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM--QFLRVACSCVVSRPKDRPSMYQ 570
NL + ++R+ V+K GR E+ R+ C P RPS
Sbjct: 318 ---NLSN--------QQTREFVEKG--GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFST 364
Query: 571 VYESLKSMAEKH 582
+Y+ L+S+ ++H
Sbjct: 365 IYQELQSIRKRH 376
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 36/285 (12%)
Query: 302 IIISTRTGV-SYKAVLPDA--SALAIKRLSACKLSEKQF---RSEMNRLGQLRHPNLVPL 355
+++STR G S+ V +A+K L + +QF R+E+ L + RH N++
Sbjct: 38 VMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 356 LGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHH 415
+G+ + ++ +V + +LY LH + ++D I ++G+ +LH
Sbjct: 98 MGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID------IARQTAQGMDYLH- 149
Query: 416 GCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE- 474
+H+ + SN I + + +I DFGLA V SR + S V G ++APE
Sbjct: 150 --AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA-TVKSR-WSGSQQVEQPTGSVLWMAPEV 205
Query: 475 --YSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRD 532
S + DVY +GIVL EL++G+ P + + + GR
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQI----------IFMVGRGYA 255
Query: 533 VVDKS-LYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLK 576
D S LY N + M+ R+ CV ++RP Q+ S++
Sbjct: 256 SPDLSKLY--KNCPKAMK--RLVADCVKKVKEERPLFPQILSSIE 296
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 47/222 (21%)
Query: 307 RTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMN--RLGQLRHPNLVPLLGFCVVEE- 363
R G YK L D +A+K S + + F +E N R+ + H N+ F V +E
Sbjct: 25 RYGAVYKGSL-DERPVAVKVFSFA--NRQNFINEKNIYRVPLMEHDNIA---RFIVGDER 78
Query: 364 -------ERLLVYKHMPNGTL--YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLH 414
E LLV ++ PNG+L Y LH + DW + R+ +RGLA+LH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTS----------DWVSSCRLAHSVTRGLAYLH 128
Query: 415 HGC------QPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR----DPNDSSFVHG 463
+P H+ ++S +L+ +D I+DFGL+ RL G+R D++ +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI-S 187
Query: 464 DLGEFGYVAPEYSSTMV------ASLKG-DVYGFGIVLLELL 498
++G Y+APE V ++LK D+Y G++ E+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 16/180 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ R E+ L RHP+++ L + +V +++ G L+ + NG LD
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-------LD 114
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
R+ G+ + H +H+ + +L+D +A+I DFGL+ ++
Sbjct: 115 EKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM----- 166
Query: 456 NDSSFVHGDLGEFGYVAPEY-SSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFK 514
+D F+ G Y APE S + A + D++ G++L LL G P D FK
Sbjct: 167 SDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK 226
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
K+F E++ QL H N+V ++ ++ LV +++ TL + +G ++ +
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAI 114
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+++ ++ G+ + + +H +P ILID + +I DFG+A+ +
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQN---------ILIDSNKTLKIFDFGIAKALSETS 165
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLD 505
++ V LG Y +PE + D+Y GIVL E+L G+ P +
Sbjct: 166 LTQTNHV---LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 318 DASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
D +A+K L A + K F E L L+H ++V G CV + ++V+++M +G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 377 LYSLLHGNGVDNTLSG------VLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNV 430
L L +G D L L S L I + G+ +L ++H+ +++
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRN 158
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD-LGEFGYVAPEYSSTMVASLKGDVYG 489
L+ ++ +I DFG++R V S D V G + ++ PE + + DV+
Sbjct: 159 CLVGENLLVKIGDFGMSRDVYS---TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 215
Query: 490 FGIVLLELLS-GQKP 503
G+VL E+ + G++P
Sbjct: 216 LGVVLWEIFTYGKQP 230
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 333 SEKQFRSEMNRLGQLRH----PNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
+EK EM R Q+ H P +V L+G C E +LV + G L+ L G +
Sbjct: 49 TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEI 107
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+S V + ++ +GM ++H + NV+L++ + A+I+DFGL++
Sbjct: 108 PVSNVAELLHQVSMGMKYLEEKNFVHR--------DLAARNVLLVNRHY-AKISDFGLSK 158
Query: 449 LVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+G+ +DS + G++ + APE + S + DV+ +G+ + E LS GQKP
Sbjct: 159 ALGA---DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 333 SEKQFRSEMNRLGQLRH----PNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
+EK EM R Q+ H P +V L+G C E +LV + G L+ L G +
Sbjct: 375 TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEI 433
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+S V + ++ +GM ++H + NV+L++ + A+I+DFGL++
Sbjct: 434 PVSNVAELLHQVSMGMKYLEEKNFVHRNL--------AARNVLLVNRHY-AKISDFGLSK 484
Query: 449 LVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+G+ +DS + G++ + APE + S + DV+ +G+ + E LS GQKP
Sbjct: 485 ALGA---DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 19/176 (10%)
Query: 333 SEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSG 392
+++ F E+ + L HPN++ +G ++ + +++ GTL G+ ++
Sbjct: 50 TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL------RGIIKSMDS 103
Query: 393 VLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLV-- 450
WS R+ + G+A+LH +H+ ++S+ L+ ++ + + DFGLARL+
Sbjct: 104 QYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160
Query: 451 --------GSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
S D + +G ++APE + K DV+ FGIVL E++
Sbjct: 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 118/286 (41%), Gaps = 51/286 (17%)
Query: 320 SALAIKRLSACKLSEKQ--FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K L ++ Q F+ E + + +PN+V LLG C V + L++++M G L
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 378 YSLLHGNGVDNTLS-GVLDWSTRLR----------------IGMGASRGLAWLHHGCQPP 420
L S D STR R I + G+A+L +
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERK 194
Query: 421 YMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV 480
++H+ +++ L+ ++ +I DFGL+R + S D + D ++ PE
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD--GNDAIPIRWMPPESIFYNR 252
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGF----KGNLVDWVNHLVIAGRSRDVVD 535
+ + DV+ +G+VL E+ S G +P EE GN++ + +
Sbjct: 253 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPL--------- 303
Query: 536 KSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEK 581
E+ +R+ C P DRPS ++ L+ M E+
Sbjct: 304 ----------ELYNLMRL---CWSKLPADRPSFCSIHRILQRMCER 336
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 31/193 (16%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 99 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 144
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVH----GDLGEFGYVAPEYSSTMVASLKGD 486
IL++++ +I DFGL +++ P D F G+ F Y APE + S+ D
Sbjct: 145 ILVENENRVKIGDFGLTKVL----PQDKEFFKVKEPGESPIFWY-APESLTESKFSVASD 199
Query: 487 VYGFGIVLLELLS 499
V+ FG+VL EL +
Sbjct: 200 VWSFGVVLYELFT 212
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 21/186 (11%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVE--EERLLVYKHMPNGTLYSLLHGNGVDNTLSG 392
+ F E RL HPN++P+LG C L+ P G+LY++LH +
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLH-----EGTNF 106
Query: 393 VLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGS 452
V+D S ++ + +RG A+L H +P ++S + ID+D ARI+ + S
Sbjct: 107 VVDQSQAVKFALDXARGXAFL-HTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQS 165
Query: 453 RDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK---GDVYGFGIVLLELLSGQKPL-DVAG 508
G +VAPE D + F ++L EL++ + P D++
Sbjct: 166 P---------GRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSN 216
Query: 509 AEEGFK 514
E G K
Sbjct: 217 XEIGXK 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 31/193 (16%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 100 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRNLATRN 145
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVH----GDLGEFGYVAPEYSSTMVASLKGD 486
IL++++ +I DFGL +++ P D + G+ F Y APE + S+ D
Sbjct: 146 ILVENENRVKIGDFGLTKVL----PQDKEYYKVKEPGESPIFWY-APESLTESKFSVASD 200
Query: 487 VYGFGIVLLELLS 499
V+ FG+VL EL +
Sbjct: 201 VWSFGVVLYELFT 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 38/276 (13%)
Query: 318 DASALAIKRLSACKLS-EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
D +A+K L L+ K F+ E L L+H ++V G C + ++V+++M +G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 377 LYSLLHGNGVDNTL---------SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS 427
L L +G D + G L S L I + G+ +L ++H+ ++
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLA 160
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD-LGEFGYVAPEYSSTMVASLKGD 486
+ L+ + +I DFG++R V S D V G + ++ PE + + D
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYS---TDYYRVGGHTMLPIRWMPPESIMYRKFTTESD 217
Query: 487 VYGFGIVLLELLS-GQKP-LDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGND 544
V+ FG++L E+ + G++P ++ E +++ + + R R V K +Y
Sbjct: 218 VWSFGVILWEIFTYGKQPWFQLSNTE------VIECITQGRVLERPR-VCPKEVYD---- 266
Query: 545 DEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
V C P+ R ++ ++Y+ L ++ +
Sbjct: 267 --------VMLGCWQREPQQRLNIKEIYKILHALGK 294
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 102 SLRDYLQAHAERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 147
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 206
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 207 GVVLYELFT 215
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+F E + + HP+LV LLG C+ +L V + MP+G L +H + + +L+
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLN 144
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
W ++ ++G+ +L + +H+ +++ +L+ +ITDFGLARL+
Sbjct: 145 WCVQI------AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG--- 192
Query: 456 NDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLD 505
D + D G+ ++A E + + DV+ +G+ + EL++ G KP D
Sbjct: 193 -DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+F E + + HP+LV LLG C+ +L V + MP+G L +H + + +L+
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
W ++ ++G+ +L + +H+ +++ +L+ +ITDFGLARL+
Sbjct: 122 WCVQI------AKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG--- 169
Query: 456 NDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLD 505
D + D G+ ++A E + + DV+ +G+ + EL++ G KP D
Sbjct: 170 -DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 98 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 143
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 144 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 202
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 203 GVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 97 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 142
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 143 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 201
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 202 GVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 103 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 148
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 149 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 207
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 208 GVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 99 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 144
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 203
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 204 GVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 99 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 144
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 203
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 204 GVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 102 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 147
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 206
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 207 GVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 106 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 151
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 152 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 210
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 211 GVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 104 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 149
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 150 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 208
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 209 GVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 130 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 175
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 176 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 234
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 235 GVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 105 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 150
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 151 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 209
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 210 GVVLYELFT 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 117 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 162
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 163 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 221
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 222 GVVLYELFT 230
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 111 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 161
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V D ++S V G + PE S K D++ FG+++ E+ S G
Sbjct: 162 SDFGLSRYV--LDDEETSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 501 QKPLD 505
+ P +
Sbjct: 219 KMPYE 223
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ +++P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 117 SLRDYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 162
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 163 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 221
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 222 GVVLYELFT 230
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 30/281 (10%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 32 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 91
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 92 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 148
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
+++ ++ +DF +I DFG+ R + D L +++PE V +
Sbjct: 149 LAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG--GKGLLPVRWMSPESLKDGVFTTYS 206
Query: 486 DVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
DV+ FG+VL E+ + AE+ ++G + V V+ G D D D
Sbjct: 207 DVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------PD 252
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
+++ +R+ C PK RPS ++ S+K E GF E
Sbjct: 253 MLLELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 289
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 318 DASALAIKRLSACKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
D +A+K L S +Q F+ E L L+H ++V G C L+V+++M +G
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 377 LYSLLHGNGVDNTL--------SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISS 428
L L +G D L G L L + + G+ +L ++H+ +++
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 157
Query: 429 NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHG-DLGEFGYVAPEYSSTMVASLKGDV 487
L+ +I DFG++R + S D V G + ++ PE + + DV
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYS---TDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 214
Query: 488 YGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDE 546
+ FG+VL E+ + G++P E + GR + R E
Sbjct: 215 WSFGVVLWEIFTYGKQPWYQLSNTEAID---------CITQGRELE------RPRACPPE 259
Query: 547 IMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
+ +R C P+ R S+ V+ L+++A+
Sbjct: 260 VYAIMR---GCWQREPQQRHSIKDVHARLQALAQ 290
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 318 DASALAIKRLSACKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
D +A+K L S +Q F+ E L L+H ++V G C L+V+++M +G
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 377 LYSLLHGNGVDNTL--------SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISS 428
L L +G D L G L L + + G+ +L ++H+ +++
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 163
Query: 429 NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHG-DLGEFGYVAPEYSSTMVASLKGDV 487
L+ +I DFG++R + S D V G + ++ PE + + DV
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYS---TDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 220
Query: 488 YGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDE 546
+ FG+VL E+ + G++P E + GR + R E
Sbjct: 221 WSFGVVLWEIFTYGKQPWYQLSNTEAID---------CITQGRELE------RPRACPPE 265
Query: 547 IMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
+ +R C P+ R S+ V+ L+++A+
Sbjct: 266 VYAIMR---GCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 37 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 96
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 97 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 153
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 154 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 209
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 210 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 255
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 256 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 294
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 307 RTGVSYKAVL------PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGF 358
R G YK L A+AIK L A ++FR E +L+HPN+V LLG
Sbjct: 38 RFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGV 97
Query: 359 CVVEEERLLVYKHMPNGTLYSLL-----HGN----GVDNTLSGVLDWSTRLRIGMGASRG 409
++ +++ + +G L+ L H + D T+ L+ + + + G
Sbjct: 98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAG 157
Query: 410 LAWL--HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+ +L HH +H+ +++ +L+ D + +I+D GL R V + D + L
Sbjct: 158 MEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD--YYKLLGNSLLP 210
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
++APE S+ D++ +G+VL E+ S G +P
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 23/189 (12%)
Query: 319 ASALAIKRLS-ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNG 375
+A+K+L + + + F E+ L L+H N+V G C R L+ + +P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 376 TLYSLL--HGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNV 430
+L L H +D+ +L +++++ GM G R Y+H+ +++
Sbjct: 102 SLREYLQKHKERIDHI--KLLQYTSQICKGMEYLGTKR------------YIHRDLATRN 147
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL++++ +I DFGL +++ G+ F Y APE + S+ DV+ F
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSF 206
Query: 491 GIVLLELLS 499
G+VL EL +
Sbjct: 207 GVVLYELFT 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 96 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 146
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V + S G + PE S K D++ FG+++ E+ S G
Sbjct: 147 SDFGLSRYVLDDEYTSS---RGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 501 QKPLD 505
+ P +
Sbjct: 204 KMPYE 208
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 47 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 163
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 220 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 265
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 266 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 304
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 318 DASALAIKRLSACKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
D +A+K L S +Q F+ E L L+H ++V G C L+V+++M +G
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 377 LYSLLHGNGVDNTL--------SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISS 428
L L +G D L G L L + + G+ +L ++H+ +++
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 186
Query: 429 NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHG-DLGEFGYVAPEYSSTMVASLKGDV 487
L+ +I DFG++R + S D V G + ++ PE + + DV
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYS---TDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 243
Query: 488 YGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDE 546
+ FG+VL E+ + G++P E + GR + R E
Sbjct: 244 WSFGVVLWEIFTYGKQPWYQLSNTEAID---------CITQGRELE------RPRACPPE 288
Query: 547 IMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
+ +R C P+ R S+ V+ L+++A+
Sbjct: 289 VYAIMR---GCWQREPQQRHSIKDVHARLQALAQ 319
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 47 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 107 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 163
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 219
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 220 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 265
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 266 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 304
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 307 RTGVSYKAVL------PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGF 358
R G YK L A+AIK L A ++FR E +L+HPN+V LLG
Sbjct: 21 RFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGV 80
Query: 359 CVVEEERLLVYKHMPNGTLYSLL-----HGN----GVDNTLSGVLDWSTRLRIGMGASRG 409
++ +++ + +G L+ L H + D T+ L+ + + + G
Sbjct: 81 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAG 140
Query: 410 LAWL--HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+ +L HH +H+ +++ +L+ D + +I+D GL R V + D + L
Sbjct: 141 MEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAAD--YYKLLGNSLLP 193
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
++APE S+ D++ +G+VL E+ S G +P
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 41 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 100
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 101 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 157
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
+++ ++ +DF +I DFG+ R + D L +++PE V +
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG--GKGLLPVRWMSPESLKDGVFTTYS 215
Query: 486 DVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
DV+ FG+VL E+ + AE+ ++G + V V+ G D D D
Sbjct: 216 DVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------PD 261
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
+ + +R+ C PK RPS ++ S+K E GF E
Sbjct: 262 MLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 298
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 34 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 93
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 94 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 150
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 151 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 207 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 252
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 253 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 38 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 97
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 98 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 154
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 155 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 210
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 211 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 256
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 257 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 295
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 22/189 (11%)
Query: 323 AIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEE---ERLLVYKHMPNG 375
AIK LS +++E Q F E + L HPN++ L+G + E LL Y M +G
Sbjct: 53 AIKSLS--RITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY--MCHG 108
Query: 376 TLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
L + + T+ ++ + G+ +RG+ +L + ++H+ +++ ++D+
Sbjct: 109 DLLQFIRSPQRNPTVKDLISF------GLQVARGMEYL---AEQKFVHRDLAARNCMLDE 159
Query: 436 DFDARITDFGLARLVGSRDPND-SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVL 494
F ++ DFGLAR + R+ H L + A E T + K DV+ FG++L
Sbjct: 160 SFTVKVADFGLARDILDREYYSVQQHRHARL-PVKWTALESLQTYRFTTKSDVWSFGVLL 218
Query: 495 LELLSGQKP 503
ELL+ P
Sbjct: 219 WELLTRGAP 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 40 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 99
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 100 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 156
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 213 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 258
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 259 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 297
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 35 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 94
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 95 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 145
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V + S G + PE S K D++ FG+++ E+ S G
Sbjct: 146 SDFGLSRYVLDDEYTSSV---GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 202
Query: 501 QKPLD 505
+ P +
Sbjct: 203 KMPYE 207
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 40 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 99
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 100 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 156
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 212
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 213 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 258
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 259 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 297
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 31 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 90
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 91 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 141
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V + S G + PE S K D++ FG+++ E+ S G
Sbjct: 142 SDFGLSRYVLDDEYTSSV---GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 198
Query: 501 QKPLD 505
+ P +
Sbjct: 199 KMPYE 203
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 41 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 100
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 101 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 157
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 213
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 214 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 259
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 260 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 298
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 96 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 146
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V + S G + PE S K D++ FG+++ E+ S G
Sbjct: 147 SDFGLSRYVLDDEYTSSV---GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 203
Query: 501 QKPLD 505
+ P +
Sbjct: 204 KMPYE 208
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 111 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 161
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V + S G + PE S K D++ FG+++ E+ S G
Sbjct: 162 SDFGLSRYVLDDEYTSSV---GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 501 QKPLD 505
+ P +
Sbjct: 219 KMPYE 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 322 LAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL 381
+AIK + +SE +F E + L H LV L G C + ++ ++M NG L + L
Sbjct: 42 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 101
Query: 382 HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARI 441
+ L + + +L ++H+ +++ L++D ++
Sbjct: 102 ------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKV 152
Query: 442 TDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
+DFGL+R V + S G + PE S K D++ FG+++ E+ S G
Sbjct: 153 SDFGLSRYVLDDEYTSSV---GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 209
Query: 501 QKPLD 505
+ P +
Sbjct: 210 KMPYE 214
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 34 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 93
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 94 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 150
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ + +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 151 LAARNCXVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 206
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 207 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 252
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D +++ +R+ C PK RPS ++ S+K E GF E
Sbjct: 253 PDMLLELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 291
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 34/283 (12%)
Query: 313 KAVLPDA--SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLV 368
K V+ D + +AIK ++ A + E+ +F +E + + + ++V LLG + L++
Sbjct: 69 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 128
Query: 369 YKHMPNGTLYSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+ M G L S L +N + S +++ + G+A+L+ ++H+
Sbjct: 129 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRD 185
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASL 483
+++ ++ +DF +I DFG+ R + D + G G +++PE V +
Sbjct: 186 LAARNCMVAEDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMSPESLKDGVFTT 241
Query: 484 KGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+VL E+ + AE+ ++G + V V+ G D D
Sbjct: 242 YSDVWSFGVVLWEIAT--------LAEQPYQGLSNEQVLRFVMEGGLLDKPDNC------ 287
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHGFSE 586
D + + +R+ C PK RPS ++ S+K E GF E
Sbjct: 288 PDMLFELMRM---CWQYNPKMRPSFLEIISSIKEEMEP-GFRE 326
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG---VDNTLSGVLDWS 397
M+ LGQ H N+V LLG C L++ ++ G L + L +D L+
Sbjct: 95 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 398 TRLRIGMGASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPN 456
L ++G+A+L C +H+ +++ +L+ + A+I DFGLAR + N
Sbjct: 153 DLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI----MN 204
Query: 457 DSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGF 513
DS+++ ++APE V +++ DV+ +GI+L E+ S G P +
Sbjct: 205 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---------Y 255
Query: 514 KGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYE 573
G LV+ + ++ + + + + N IMQ +C P RP+ Q+
Sbjct: 256 PGILVNSKFYKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICS 307
Query: 574 SLKSMAEK 581
L+ A++
Sbjct: 308 FLQEQAQE 315
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 178
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 322 LAIKRLSA-CKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTL 377
+A+K L A C + ++ E++ L L H +++ G C + E+ LV +++P G+L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
L + + L+ +L ++ ++ G+A+LH Y+H+ +++ +L+D+D
Sbjct: 106 RDYLPRHSIG--LAQLLLFAQQI------CEGMAYLH---SQHYIHRNLAARNVLLDNDR 154
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+I DFGLA+ V GD F Y APE DV+ FG+ L EL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 498 L----SGQKP----LDVAGAEEG 512
L S Q P L++ G +G
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQG 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 82 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 185
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 24/203 (11%)
Query: 322 LAIKRLSA-CKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTL 377
+A+K L A C + ++ E++ L L H +++ G C + E+ LV +++P G+L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
L + + L+ +L ++ ++ G+A+LH Y+H+ +++ +L+D+D
Sbjct: 106 RDYLPRHSIG--LAQLLLFAQQI------CEGMAYLH---AQHYIHRNLAARNVLLDNDR 154
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+I DFGLA+ V GD F Y APE DV+ FG+ L EL
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYEL 213
Query: 498 L----SGQKP----LDVAGAEEG 512
L S Q P L++ G +G
Sbjct: 214 LTHCDSSQSPPTKFLELIGIAQG 236
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG---VDNTLSGVLDWS 397
M+ LGQ H N+V LLG C L++ ++ G L + L +D L+
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 398 TRLRIGMGASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPN 456
L ++G+A+L C +H+ +++ +L+ + A+I DFGLAR + N
Sbjct: 161 DLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI----MN 212
Query: 457 DSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGF 513
DS+++ ++APE V +++ DV+ +GI+L E+ S G P +
Sbjct: 213 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---------Y 263
Query: 514 KGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYE 573
G LV+ + ++ + + + + N IMQ +C P RP+ Q+
Sbjct: 264 PGILVNSKFYKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICS 315
Query: 574 SLKSMAEK 581
L+ A++
Sbjct: 316 FLQEQAQE 323
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 135 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 179
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 178
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 78 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 181
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 135 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 179
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 75 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 178
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 185
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 180
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 79 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 138 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 182
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 122 YREL------QKLSKFDEQRTATYITELAN-ALSYCHSKR---VIHRDIKPENLLLGSAG 171
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S +D G Y+ PE + K D++ G++ E
Sbjct: 172 ELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 226 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 267
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 85 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 144 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 188
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 237
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 178
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 69 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 128 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 172
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 100 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 159 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 203
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 204 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 252
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 181
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 181
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 178
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 99 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 148
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S +D G Y+ PE + K D++ G++ E
Sbjct: 149 ELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 203 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 81 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 140 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 184
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 233
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 97 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 146
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S D G Y+ PE + K D++ G++ E
Sbjct: 147 ELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 201 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 77 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 180
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 318 DASALAIKRLSACKLSEKQFR---SEMNRLGQLRHPNLVPLLGFCVVEEERLL--VYKHM 372
D L K L ++E + + SE+N L +L+HPN+V + L V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPY--MHQYISSNV 430
G L S++ + LD LR+ + L H + +H+ +
Sbjct: 90 EGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+ +D + ++ DFGLAR++ +D+SF +G Y++PE + M + K D++
Sbjct: 147 VFLDGKQNVKLGDFGLARILN----HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 491 GIVLLELLSGQKPLDVAGAEE 511
G +L EL + P +E
Sbjct: 203 GCLLYELCALMPPFTAFSQKE 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 78 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 181
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S D G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S D G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 101 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 150
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S D G Y+ PE + K D++ G++ E
Sbjct: 151 ELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 205 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 185
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 337 FRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
++ E+ L L H ++V G C + E+ LV +++P G+L L + V L+ +L
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG--LAQLL 115
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
++ ++ G+A+LH Y+H+ +++ +L+D+D +I DFGLA+ V
Sbjct: 116 LFAQQI------CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 166
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
GD F Y APE DV+ FG+ L ELL+
Sbjct: 167 EYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 309 GVSYKAV-LPDAS------ALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVV 361
G YK + +PD A+ + R + + K+ E + + P + LLG C+
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 362 EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPY 421
+L V + MP G L + N +L+W M ++G+++L
Sbjct: 91 STVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWC------MQIAKGMSYLE---DVRL 140
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSSTM 479
+H+ +++ +L+ +ITDFGLARL+ D + H D G+ ++A E
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLARLLDI----DETEYHADGGKVPIKWMALESILRR 196
Query: 480 VASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
+ + DV+ +G+ + EL++ G KP D A E
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 229
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 72 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFGLA+L+G+ + H +
Sbjct: 131 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEG 175
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 176 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 337 FRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
++ E+ L L H ++V G C + E+ LV +++P G+L L + V L+ +L
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVG--LAQLL 114
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
++ ++ G+A+LH Y+H+ +++ +L+D+D +I DFGLA+ V
Sbjct: 115 LFAQQI------CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH 165
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
GD F Y APE DV+ FG+ L ELL+
Sbjct: 166 EYYRVREDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 309 GVSYKAV-LPDASALAIK------RLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVV 361
G YK + +P+ + I R + + K+ E + + +P++ LLG C+
Sbjct: 63 GTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 122
Query: 362 EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG--ASRGLAWLHHGCQP 419
+L+ + MP G L + + + +L+W ++ GM R L
Sbjct: 123 STVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL--------- 172
Query: 420 PYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSS 477
+H+ +++ +L+ +ITDFGLA+L+G+ + H + G+ ++A E
Sbjct: 173 --VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESIL 226
Query: 478 TMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
+ + + DV+ +G+ + EL++ G KP D A E
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 261
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 318 DASALAIKRLSACKLSEKQFR---SEMNRLGQLRHPNLVPLLGFCVVEEERLL--VYKHM 372
D L K L ++E + + SE+N L +L+HPN+V + L V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPY--MHQYISSNV 430
G L S++ + LD LR+ + L H + +H+ +
Sbjct: 90 EGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+ +D + ++ DFGLAR++ +D+SF +G Y++PE + M + K D++
Sbjct: 147 VFLDGKQNVKLGDFGLARILN----HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 491 GIVLLELLSGQKPLDVAGAEE 511
G +L EL + P +E
Sbjct: 203 GCLLYELCALMPPFTAFSQKE 223
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 97 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 146
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S S G Y+ PE + K D++ G++ E
Sbjct: 147 ELKIADFGWSCHAPSSRRTTLS------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 201 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 41/282 (14%)
Query: 320 SALAIKRL--SACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K L +A + SE N L Q+ HP+++ L G C + LL+ ++ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 378 YSLLH-----GNGV----DNTLSGVLDWSTRLRIGMGASRGLAW-----LHHGCQPPYMH 423
L G G + S LD + MG AW + + + +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVA 481
+ +++ IL+ + +I+DFGL+R V D S+V G ++A E +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED----SYVKRSQGRIPVKWMAIESLFDHIY 229
Query: 482 SLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG 540
+ + DV+ FG++L E+++ G P E F +L+ G + D
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF---------NLLKTGHRMERPD----- 275
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKH 582
N E M R+ C P RP + + L+ M K
Sbjct: 276 --NCSEEM--YRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 101 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 150
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 151 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 205 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 99 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 148
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 149 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 203 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 99 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 148
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 149 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 203 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 122 YREL------QKLSKFDEQRTATYITELAN-ALSYCHSKR---VIHRDIKPENLLLGSAG 171
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 172 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 226 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + S + G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWSVHAPSSRRTELC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 97 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 147
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 148 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 203 WEILMHGVKPF------QGVKNNDV 221
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 94
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 95 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 144
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 145 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 198
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 199 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 44/255 (17%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN----------GVDNTL 390
M+ LGQ H N+V LLG C L++ ++ G L + L + N+
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 391 SGVLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARL 449
+ D L ++G+A+L C +H+ +++ +L+ + A+I DFGLAR
Sbjct: 161 ASTRDL---LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 450 VGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDV 506
+ NDS+++ ++APE V +++ DV+ +GI+L E+ S G P
Sbjct: 214 I----MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP--- 266
Query: 507 AGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRP 566
+ G LV+ + ++ + + + + N IMQ +C P RP
Sbjct: 267 ------YPGILVNSKFYKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWALEPTHRP 312
Query: 567 SMYQVYESLKSMAEK 581
+ Q+ L+ A++
Sbjct: 313 TFQQICSFLQEQAQE 327
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 18/196 (9%)
Query: 313 KAVLPDASAL-AIKRLSACKLSEK-QFRSEMNR--LGQLRHPNLVPLLGFCVVEEERLLV 368
K PD+ L A+K L L + + R++M R L + HP +V L E + L+
Sbjct: 49 KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLI 108
Query: 369 YKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISS 428
+ G L++ L V T V + L +G+ L ++ +P
Sbjct: 109 LDFLRGGDLFTRL-SKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKP--------- 158
Query: 429 NVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVY 488
IL+D++ ++TDFGL++ + SF G Y+APE + S D +
Sbjct: 159 ENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC----GTVEYMAPEVVNRQGHSHSADWW 214
Query: 489 GFGIVLLELLSGQKPL 504
+G+++ E+L+G P
Sbjct: 215 SYGVLMFEMLTGSLPF 230
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 100 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 149
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 150 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 204 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 245
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 113 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 162
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 163 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 216
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 217 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 92
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 93 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 142
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 143 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 196
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 197 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 238
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 103/263 (39%), Gaps = 41/263 (15%)
Query: 318 DASALAIKRLSACKLSEKQ---FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
D IK ++ ++S K+ R E+ L ++HPN+V +V +
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 375 GTLYSLLHGN-GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
G L+ ++ GV +LDW ++ + L H +H+ I S I +
Sbjct: 108 GDLFKRINAQKGVLFQEDQILDWFVQICLA---------LKHVHDRKILHRDIKSQNIFL 158
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D ++ DFG+AR++ S +G Y++PE + K D++ G V
Sbjct: 159 TKDGTVQLGDFGIARVLNS----TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCV 214
Query: 494 LLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQF--L 551
L EL + + H AG +++V K + G + L
Sbjct: 215 LYELCT---------------------LKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDL 253
Query: 552 RVACSCVVSR-PKDRPSMYQVYE 573
R S + R P+DRPS+ + E
Sbjct: 254 RSLVSQLFKRNPRDRPSVNSILE 276
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWS--VHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 47/261 (18%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------------- 384
M+ LGQ H N+V LLG C L++ ++ G L + L
Sbjct: 88 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 385 GVDNTLSGVLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITD 443
G+D L+ L ++G+A+L C +H+ +++ +L+ + A+I D
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 201
Query: 444 FGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-G 500
FGLAR + NDS+++ ++APE V +++ DV+ +GI+L E+ S G
Sbjct: 202 FGLARDIM----NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 501 QKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVS 560
P + G LV+ + ++ + + + + N IMQ +C
Sbjct: 258 LNP---------YPGILVNSKFYKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWAL 300
Query: 561 RPKDRPSMYQVYESLKSMAEK 581
P RP+ Q+ L+ A++
Sbjct: 301 EPTHRPTFQQICSFLQEQAQE 321
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 35 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 93
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 94 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 144
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 145 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 200 WEILMHGVKPF------QGVKNNDV 218
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L FC ++E+L
Sbjct: 56 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYF 114
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 115 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 163
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 219
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 220 SDLWALGCIIYQLVAGLPPFR-AGNE 244
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFG A+L+G+ + H +
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----YHAEG 180
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 38 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 97 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 147
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 148 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 203 WEILMHGVKPF------QGVKNNDV 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 77 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFG A+L+G+ + H +
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----YHAEG 180
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 99 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 148
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 149 ELKIADFGWS--VHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 203 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L++ + MP G L + + + +L+W ++ GM
Sbjct: 79 DNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFG A+L+G+ + H +
Sbjct: 138 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----YHAEG 182
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 43 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 101
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 102 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 152
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 153 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 208 WEILMHGVKPF------QGVKNNDV 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P G +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 101 YKEL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 150
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 151 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 205 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 97 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 146
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + + G Y+ PE + K D++ G++ E
Sbjct: 147 ELKIADFGWS--VHAPSSRRDTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 201 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 242
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 40 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 98
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 99 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 149
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 150 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 204
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 205 WEILMHGVKPF------QGVKNNDV 223
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 101 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 150
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE K D++ G++ E
Sbjct: 151 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEF 204
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 205 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 66 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 124
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 125 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 175
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 176 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 230
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 231 WEILMHGVKPF------QGVKNNDV 249
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 41 ALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 99
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 100 LRSFLQVRKYSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 151 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 205
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 206 WEILMHGVKPF------QGVKNNDV 224
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 98 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 147
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + SS G Y+ PE + K D++ G++ E
Sbjct: 148 ELKIADFGWSVHA------PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 202 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGE 476
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 527
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 528 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 583 WEILMHGVKPF------QGVKNNDV 601
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 75 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFG A+L+G+ + H +
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----YHAEG 178
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 77 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFG A+L+G+ + H +
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----YHAEG 180
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 51 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 109
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 110 GLSYAKNGCLLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 158
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ +SFV G YV+PE + AS
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV----GTAQYVSPELLTEKSASKS 214
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 215 SDLWALGCIIYQLVAGLPPFR-AGNE 239
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 295 NSFAVENIIISTRTGVSYKAV-LPDASAL----AIKRL--SACKLSEKQFRSEMNRLGQL 347
F ++ S G YK + +P+ + AIK L + + K+ E + +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 348 RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMG-- 405
+P++ LLG C+ +L+ + MP G L + + + +L+W ++ GM
Sbjct: 82 DNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 140
Query: 406 ASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
R L +H+ +++ +L+ +ITDFG A+L+G+ + H +
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKE----YHAEG 185
Query: 466 GE--FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEE 511
G+ ++A E + + + DV+ +G+ + EL++ G KP D A E
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + + G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWS--VHAPSSRRTXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 112
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK 169
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 170 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 222
Query: 518 V 518
V
Sbjct: 223 V 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ + E+ L RHP+++ L + +V +++ G L+ + +G V +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG------RVEE 110
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
R R+ + + H + +H+ + +L+D +A+I DFGL+ ++
Sbjct: 111 MEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----- 161
Query: 456 NDSSFVHGDLGEFGYVAPEY-SSTMVASLKGDVYGFGIVLLELLSGQKPLD 505
+D F+ G Y APE S + A + D++ G++L LL G P D
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + SS G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWSVHA------PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 16/171 (9%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ + E+ L RHP+++ L + +V +++ G L+ + +G V +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG------RVEE 110
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
R R+ + + H + +H+ + +L+D +A+I DFGL+ ++
Sbjct: 111 MEAR-RLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM----- 161
Query: 456 NDSSFVHGDLGEFGYVAPEY-SSTMVASLKGDVYGFGIVLLELLSGQKPLD 505
+D F+ G Y APE S + A + D++ G++L LL G P D
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+
Sbjct: 97 LRSFLQVRKFSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSAT 147
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 148 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 203 WEILMHGVKPF------QGVKNNDV 221
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 99 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 148
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + SS G Y+ PE + K D++ G++ E
Sbjct: 149 ELKIADFGWSVHA------PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 203 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+ +
Sbjct: 100 YREL------QKLSRFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSNG 149
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 150 ELKIADFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G P + +E ++ + V++ + +RD++ + L
Sbjct: 204 LVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV 95
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 96 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKKVIHRDIKPENLLLGSAG 145
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 146 ELKIADFGWS--VHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + ++ +K + V++ + +RD++ + L
Sbjct: 200 LVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLL 241
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 115/254 (45%), Gaps = 34/254 (13%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEER-----LLVYKHMPNGTLYSLLHGNGVDNT 389
++F SE + HPN++ LLG C+ + +++ M G L++ L + ++ T
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLE-T 139
Query: 390 LSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARL 449
+ T L+ + + G+ +L + ++H+ +++ ++ DD + DFGL++
Sbjct: 140 GPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 450 VGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDV 506
+ S D + G + + ++A E + V + K DV+ FG+ + E+ + G P
Sbjct: 197 IYSGD----YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
Query: 507 AGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRP 566
E + D++ H + D +D+ LY EIM SC + P DRP
Sbjct: 253 VQNHEMY-----DYLLHGHRLKQPEDCLDE-LY------EIMY------SCWRTDPLDRP 294
Query: 567 SMYQVYESLKSMAE 580
+ + L+ + E
Sbjct: 295 TFSVLRLQLEKLLE 308
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 128
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 186 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 238
Query: 518 V 518
V
Sbjct: 239 V 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 128
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 129 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 185
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 186 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 238
Query: 518 V 518
V
Sbjct: 239 V 239
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG----VDNTLS---GV 393
M+ LGQ H N+V LLG C L++ ++ G L + L D +
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 394 LDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGS 452
L L ++G+A+L C +H+ +++ +L+ + A+I DFGLAR +
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI-- 214
Query: 453 RDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGA 509
NDS+++ ++APE V +++ DV+ +GI+L E+ S G P
Sbjct: 215 --MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP------ 266
Query: 510 EEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMY 569
+ G LV+ + ++ + + + + N IMQ +C P RP+
Sbjct: 267 ---YPGILVNSKFYKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQ 315
Query: 570 QVYESLKSMAEK 581
Q+ L+ A++
Sbjct: 316 QICSFLQEQAQE 327
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 98 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 147
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I +FG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 148 ELKIANFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 202 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 243
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGE 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+ +
Sbjct: 97 LRSFLQVRKFSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSSN 147
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS+ G+ ++APE + + DV+ FG+ +
Sbjct: 148 DCVKLGDFGLSRYM-----EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 202
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 203 WEILMHGVKPF------QGVKNNDV 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 118
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 119 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 176 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 228
Query: 518 V 518
V
Sbjct: 229 V 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 106
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 107 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 163
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 164 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 216
Query: 518 V 518
V
Sbjct: 217 V 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 108
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 109 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 165
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 166 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 218
Query: 518 V 518
V
Sbjct: 219 V 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 112
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 113 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 169
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 170 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 222
Query: 518 V 518
V
Sbjct: 223 V 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P G +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 101 YKEL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 150
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + SS G Y+ PE + K D++ G++ E
Sbjct: 151 ELKIADFGWSVHA------PSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 205 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 246
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKD-KN 126
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 127 IIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 184 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 236
Query: 518 V 518
V
Sbjct: 237 V 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 318 DASALAIKRLSACKLSEKQFR---SEMNRLGQLRHPNLVPLLGFCVVEEERLL--VYKHM 372
D L K L ++E + + SE+N L +L+HPN+V + L V ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPY--MHQYISSNV 430
G L S++ + LD LR+ + L H + +H+ +
Sbjct: 90 EGGDLASVITKGTKERQ---YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+ +D + ++ DFGLAR++ +D F +G Y++PE + M + K D++
Sbjct: 147 VFLDGKQNVKLGDFGLARILN----HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 491 GIVLLELLSGQKPLDVAGAEE 511
G +L EL + P +E
Sbjct: 203 GCLLYELCALMPPFTAFSQKE 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 320 SALAIKRL--SACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K L +A + SE N L Q+ HP+++ L G C + LL+ ++ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 378 YSLLH-----GNGV----DNTLSGVLDWSTRLRIGMGASRGLAW-----LHHGCQPPYMH 423
L G G + S LD + MG AW + + + +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVA 481
+ +++ IL+ + +I+DFGL+R V D S V G ++A E +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED----SXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 482 SLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG 540
+ + DV+ FG++L E+++ G P E F +L+ G + D
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF---------NLLKTGHRMERPD----- 275
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKH 582
N E M R+ C P RP + + L+ M K
Sbjct: 276 --NCSEEM--YRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 320 SALAIKRL--SACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K L +A + SE N L Q+ HP+++ L G C + LL+ ++ G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 378 YSLLH-----GNGV----DNTLSGVLDWSTRLRIGMGASRGLAW-----LHHGCQPPYMH 423
L G G + S LD + MG AW + + + +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVH 173
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVA 481
+ +++ IL+ + +I+DFGL+R V D S V G ++A E +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED----SXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 482 SLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG 540
+ + DV+ FG++L E+++ G P E F +L+ G + D
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF---------NLLKTGHRMERPD----- 275
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKH 582
N E M R+ C P RP + + L+ M K
Sbjct: 276 --NCSEEM--YRLMLQCWKQEPDKRPVFADISKDLEKMMVKR 313
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLL-HGNGVDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L + + G
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-- 117
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + RGLA+L Q MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 118 ------KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 166
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y+APE S++ D++ G+ L+EL G+ P+ A+E
Sbjct: 167 DSMANSFV----GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+
Sbjct: 99 YREL------QKLSKFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSAG 148
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I +FG + V + ++ G Y+ PE + K D++ G++ E
Sbjct: 149 ELKIANFGWS--VHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G+ P + +E +K + V++ + +RD++ + L
Sbjct: 203 LVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 319 ASALAIKRLSACKLS--EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
A A+AIK C ++F E + Q HP++V L+G + E ++ + G
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGE 476
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L S L L+ ++ ++ +L S LA+L ++H+ I++ +L+
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQL------STALAYLE---SKRFVHRDIAARNVLVSAT 527
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVL 494
++ DFGL+R + DS++ G+ ++APE + + DV+ FG+ +
Sbjct: 528 DCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 582
Query: 495 LE-LLSGQKPLDVAGAEEGFKGNLV 518
E L+ G KP +G K N V
Sbjct: 583 WEILMHGVKPF------QGVKNNDV 601
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 21/222 (9%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
LA+K L +L E Q R E+ LRHPN++ L G+ L+ ++ P GT+
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
Y L LS + T I A+ L++ H +H+ I +L+ +
Sbjct: 100 YREL------QKLSRFDEQRTATYITELAN-ALSYCH---SKRVIHRDIKPENLLLGSNG 149
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLEL 497
+ +I DFG + V + + G Y+ PE + K D++ G++ E
Sbjct: 150 ELKIADFGWS--VHAPSSRRDTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
Query: 498 LSGQKPLDVAGAEEGFKG-NLVDWVNHLVIAGRSRDVVDKSL 538
L G P + +E ++ + V++ + +RD++ + L
Sbjct: 204 LVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 97 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 148
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+I DFGL R + D + H + F + APE T S D + FG+ L E
Sbjct: 149 L-VKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
Query: 497 LLS-GQKP 503
+ + GQ+P
Sbjct: 207 MFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 106
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 107 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 158
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+I DFGL R + D + H + F + APE T S D + FG+ L E
Sbjct: 159 L-VKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWE 216
Query: 497 LLS-GQKP 503
+ + GQ+P
Sbjct: 217 MFTYGQEP 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 42 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 100
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 101 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 152
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVL 494
+I DFGL R + ND +V + + F + APE T S D + FG+ L
Sbjct: 153 L-VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
Query: 495 LELLS-GQKP 503
E+ + GQ+P
Sbjct: 209 WEMFTYGQEP 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ RI DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 48 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 106
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 107 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 155
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ +SFV G YV+PE + A
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV----GTAQYVSPELLTEKSACKS 211
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 212 SDLWALGCIIYQLVAGLPPFR-AGNE 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 32/289 (11%)
Query: 296 SFAVENIIISTRTGVSYKAV-LPDASALAIKRLSACKLSEKQFRS----EMNRLGQLRHP 350
+F +E I + Y+A L D +A+K++ L + + R+ E++ L QL HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 351 NLVPLLGFCVVEEERLLVYKHMPNGTLYSLL-HGNGVDNTLSGVLDWSTRLRIGMGASRG 409
N++ + + E +V + G L ++ H + W +++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL------- 145
Query: 410 LAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFG 469
+ L H MH+ I + I ++ D GL R S+ ++ H +G
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK----TTAAHSLVGTPY 201
Query: 470 YVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGR 529
Y++PE + K D++ G +L E+ + Q P F G D +N + +
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP---------FYG---DKMNLYSLCKK 249
Query: 530 SRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSM 578
L +E+ Q + + C+ P+ RP + VY+ K M
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNM---CINPDPEKRPDVTYVYDVAKRM 295
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 97 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 148
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVL 494
+I DFGL R + ND +V + + F + APE T S D + FG+ L
Sbjct: 149 L-VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 495 LELLS-GQKP 503
E+ + GQ+P
Sbjct: 205 WEMFTYGQEP 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 52/260 (20%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKH-------------MPNGTLYSLLHGNGVD 387
M+ LGQ H N+V LLG C L++ ++ P G YS + +
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 388 NTLSG--VLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDF 444
LS +L +S+++ ++G+A+L C +H+ +++ +L+ + A+I DF
Sbjct: 161 EQLSSRDLLHFSSQV------AQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDF 210
Query: 445 GLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQ 501
GLAR + NDS+++ ++APE V +++ DV+ +GI+L E+ S G
Sbjct: 211 GLARDIM----NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 502 KPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSR 561
P + G LV+ + ++ + + + + N IMQ +C
Sbjct: 267 NP---------YPGILVNSKFYKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWALE 309
Query: 562 PKDRPSMYQVYESLKSMAEK 581
P RP+ Q+ L+ A++
Sbjct: 310 PTHRPTFQQICSFLQEQAQE 329
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 308 TGVSYKAV-LPDASALAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEER 365
+G Y A+ + +AI++++ + +K+ +E+ + + ++PN+V L +V +E
Sbjct: 34 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 93
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+V +++ G+L D +D + + L +LH +H+
Sbjct: 94 WVVMEYLAGGSL--------TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRN 142
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
I S+ IL+ D ++TDFG + S+ V G ++APE + K
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV----GTPYWMAPEVVTRKAYGPKV 198
Query: 486 DVYGFGIVLLELLSGQKP 503
D++ GI+ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ + +
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSH 141
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 199 DIHHIDXXKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 257 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 298
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 299 FKQLVEDL 306
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 38 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 96
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 97 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 148
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVL 494
+I DFGL R + ND +V + + F + APE T S D + FG+ L
Sbjct: 149 L-VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204
Query: 495 LELLS-GQKP 503
E+ + GQ+P
Sbjct: 205 WEMFTYGQEP 214
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 52 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 110
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 111 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 159
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ +SFV G YV+PE + A
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV----GTAQYVSPELLTEKSACKS 215
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 216 SDLWALGCIIYQLVAGLPPFR-AGNE 240
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 337 FRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
+ E+ L L H N+V G C + L+ + +P+G+L L N +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN------KNKI 123
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ +L+ + +G+ +L Y+H+ +++ +L++ + +I DFGL + + +
Sbjct: 124 NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+ D F Y APE + DV+ FG+ L ELL+
Sbjct: 181 EXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D +
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKDKNI 471
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 472 -IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 528 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 580
Query: 518 V 518
V
Sbjct: 581 V 581
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 48 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 106
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 107 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 158
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVL 494
+I DFGL R + ND +V + + F + APE T S D + FG+ L
Sbjct: 159 L-VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214
Query: 495 LELLS-GQKP 503
E+ + GQ+P
Sbjct: 215 WEMFTYGQEP 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 33/261 (12%)
Query: 337 FRSEMNRLGQLRHPNLVPLLGFC--VVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
++ E++ L L H +++ G C LV +++P G+L L + + L+ +L
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG--LAQLL 137
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
++ ++ G+A+LH Y+H+ +++ +L+D+D +I DFGLA+ V
Sbjct: 138 LFAQQI------CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL----SGQKP----LDV 506
GD F Y APE DV+ FG+ L ELL S Q P L++
Sbjct: 189 EXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL 247
Query: 507 AGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRP 566
G +G V + L+ G DK E+ ++ +C + RP
Sbjct: 248 IGIAQG--QMTVLRLTELLERGERLPRPDKC------PAEVYHLMK---NCWETEASFRP 296
Query: 567 SMYQVYESLKSMAEKHGFSEP 587
+ + LK++ EK+ P
Sbjct: 297 TFENLIPILKTVHEKYQGQAP 317
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 20/190 (10%)
Query: 321 ALAIKRLSACKLSEKQ----FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
++A+K L LS+ + F E+N + L H NL+ L G + ++ V + P G+
Sbjct: 42 SVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGS 100
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L L + L + ++ ++ GMG ++H + N++L D
Sbjct: 101 LLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHR--------DLAARNLLLATRD 152
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGE--FGYVAPEYSSTMVASLKGDVYGFGIVL 494
+I DFGL R + ND +V + + F + APE T S D + FG+ L
Sbjct: 153 L-VKIGDFGLMRALPQ---NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 208
Query: 495 LELLS-GQKP 503
E+ + GQ+P
Sbjct: 209 WEMFTYGQEP 218
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 337 FRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
+ E+ L L H N+V G C + L+ + +P+G+L L N +
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN------KNKI 111
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
+ +L+ + +G+ +L Y+H+ +++ +L++ + +I DFGL + + +
Sbjct: 112 NLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+ D F Y APE + DV+ FG+ L ELL+
Sbjct: 169 EXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 32/178 (17%)
Query: 334 EKQFRSEMNRLGQLRHPNLVPLLG--FCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLS 391
++ F+ E+ L L +V G + E LV +++P+G L L + S
Sbjct: 52 QRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDAS 111
Query: 392 GVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+L +S+++ GM G+ R + H+ +++ IL++ + +I DFGLA+
Sbjct: 112 RLLLYSSQICKGMEYLGSRRCV------------HRDLAARNILVESEAHVKIADFGLAK 159
Query: 449 LVG-------SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
L+ R+P S + APE S + S + DV+ FG+VL EL +
Sbjct: 160 LLPLDKDXXVVREPGQSPIF--------WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E N + QL +P +V ++G C E +LV + G L L N V D +
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN------RHVKDKNI 472
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ + S G+ +L + ++H+ +++ +L+ A+I+DFGL++ + + +
Sbjct: 473 -IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 528
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNL 517
+ HG + APE + S K DV+ FG+++ E S GQKP G KG+
Sbjct: 529 AQTHGKW-PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY------RGMKGSE 581
Query: 518 V 518
V
Sbjct: 582 V 582
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 17/198 (8%)
Query: 308 TGVSYKAV-LPDASALAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEER 365
+G Y A+ + +AI++++ + +K+ +E+ + + ++PN+V L +V +E
Sbjct: 33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+V +++ G+L D +D + + L +LH +H+
Sbjct: 93 WVVMEYLAGGSL--------TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
I S+ IL+ D ++TDFG + S+ V G ++APE + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV----GTPYWMAPEVVTRKAYGPKV 197
Query: 486 DVYGFGIVLLELLSGQKP 503
D++ GI+ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER----LLVYKHMPNGTLYSLLHGNGVDNTLS 391
+FR E L HP +V + E +V +++ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TE 110
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
G + + + A + L + H Q +H+ + I+I ++ DFG+AR +
Sbjct: 111 GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
N + +G Y++PE + + DVY G VL E+L+G+ P
Sbjct: 168 DSG-NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 31/235 (13%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 29 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 87
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 88 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 136
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 192
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL-VDWVNHLVIAGRSRDVVDKSL 538
D++ G ++ +L++G P F+ + +++ ++RD+V+K L
Sbjct: 193 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 247
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 31/235 (13%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 54 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 112
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 113 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 161
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 162 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 217
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL-VDWVNHLVIAGRSRDVVDKSL 538
D++ G ++ +L++G P F+ + +++ ++RD+V+K L
Sbjct: 218 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLL 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ + +
Sbjct: 75 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 134
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 192 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 250 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 291
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 292 FKQLVEDL 299
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIT 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 31/235 (13%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 28 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 86
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 87 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 135
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 191
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL-VDWVNHLVIAGRSRDVVDKSL 538
D++ G ++ +L++G P F+ + +++ ++RD+V+K L
Sbjct: 192 SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLL 246
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 122/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D ++ +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ + +
Sbjct: 71 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 130
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 188 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 246 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 287
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 288 FKQLVEDL 295
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 49 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 107
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 156
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ ++FV G YV+PE + A
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV----GTAQYVSPELLTEKSACKS 212
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 213 SDLWALGCIIYQLVAGLPPFR-AGNE 237
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ + +
Sbjct: 74 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 133
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 191 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 249 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 290
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 291 FKQLVEDL 298
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 26 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 84
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 85 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 133
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 189
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 190 SDLWALGCIIYQLVAGLPPFR-AGNE 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 27 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 85
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 86 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 134
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 190
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 191 SDLWALGCIIYQLVAGLPPFR-AGNE 215
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ + +
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSH 141
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 199 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 257 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 298
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 299 FKQLVEDL 306
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ + +
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 141
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 199 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 257 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 298
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 299 FKQLVEDL 306
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 308 TGVSYKAV-LPDASALAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEER 365
+G Y A+ + +AI++++ + +K+ +E+ + + ++PN+V L +V +E
Sbjct: 33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+V +++ G+L D +D + + L +LH +H+
Sbjct: 93 WVVMEYLAGGSL--------TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
I S+ IL+ D ++TDFG + S V G ++APE + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV----GTPYWMAPEVVTRKAYGPKV 197
Query: 486 DVYGFGIVLLELLSGQKP 503
D++ GI+ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 318 DASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPN 374
+A +A+K L A + SEM + + +H N++ LLG C + ++ ++
Sbjct: 53 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 112
Query: 375 GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQ 424
G L L ++ + + + +RG+ +L C +H+
Sbjct: 113 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHR 168
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
+++ +L+ ++ +I DFGLAR + + D + +G L ++APE V + +
Sbjct: 169 DLTARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 226
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+++ E+ + G P EE FK L+ G D
Sbjct: 227 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK---------LLKEGHRMDKPANCT----- 272
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
+E+ +R C + P RP+ Q+ E L
Sbjct: 273 -NELYMMMR---DCWHAVPSQRPTFKQLVEDL 300
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 30/143 (20%)
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMH 423
LV +++P+G L L + S +L +S+++ GM G+ R + H
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV------------H 138
Query: 424 QYISSNVILIDDDFDARITDFGLARLVG-------SRDPNDSSFVHGDLGEFGYVAPEYS 476
+ +++ IL++ + +I DFGLA+L+ R+P S + APE
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--------WYAPESL 190
Query: 477 STMVASLKGDVYGFGIVLLELLS 499
S + S + DV+ FG+VL EL +
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER----LLVYKHMPNGTLYSLLHGNGVDNTLS 391
+FR E L HP +V + E +V +++ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TE 110
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
G + + + A + L + H Q +H+ + ILI ++ DFG+AR +
Sbjct: 111 GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIA 167
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
N +G Y++PE + + DVY G VL E+L+G+ P
Sbjct: 168 DSG-NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSE---KQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
GV YKA +A+KR+ E E++ L +L HPN+V L+ E
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
LV++ M L D +G+ D ++ + RG+A H Q +H+
Sbjct: 95 TLVFEFMEKDLKKVL------DENKTGLQDSQIKIYL-YQLLRGVAHCH---QHRILHRD 144
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVASLK 484
+ +LI+ D ++ DFGLAR G S+ H ++ Y AP+ + S
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGI---PVRSYTH-EVVTLWYRAPDVLMGSKKYSTS 200
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ G + E+++G KPL
Sbjct: 201 VDIWSIGCIFAEMITG-KPL 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL-LHGNGVDNTLSGVLDWST 398
E+ L QL+HPNLV LL + LV+++ + L+ L + GV L + W T
Sbjct: 52 EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT 111
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+ H C +H+ + ILI ++ DFG ARL+ S
Sbjct: 112 LQAVNFCHK-------HNC----IHRDVKPENILITKHSVIKLCDFGFARLLTG----PS 156
Query: 459 SFVHGDLGEFGYVAPEYSSTMVASLKG----DVYGFGIVLLELLSG 500
+ ++ Y +PE +V + DV+ G V ELLSG
Sbjct: 157 DYYDDEVATRWYRSPE---LLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER----LLVYKHMPNGTLYSLLHGNGVDNTLS 391
+FR E L HP +V + E +V +++ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TE 110
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
G + + + A + L + H Q +H+ + I+I ++ DFG+AR +
Sbjct: 111 GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
N + +G Y++PE + + DVY G VL E+L+G+ P
Sbjct: 168 DSG-NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER----LLVYKHMPNGTLYSLLHGNGVDNTLS 391
+FR E L HP +V + E +V +++ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TE 110
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
G + + + A + L + H Q +H+ + I+I ++ DFG+AR +
Sbjct: 111 GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
N + +G Y++PE + + DVY G VL E+L+G+ P
Sbjct: 168 DSG-NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 33 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 91
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 92 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 140
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 141 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 196
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 197 SDLWALGCIIYQLVAGLPPFR-AGNE 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 320 SALAIKRLSACKLSEKQFR---SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNG 375
+ +A+K L + +EK SEM + + +H N++ LLG C + ++ ++ G
Sbjct: 102 TKVAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
Query: 376 TLYSLLHGN---GVDNTLSGVLDWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYI 426
L L G++ + + + +L +RG+ +L +H+ +
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 217
Query: 427 SSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGD 486
++ +L+ +D +I DFGLAR + D + +G L ++APE + + + D
Sbjct: 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSD 275
Query: 487 VYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDD 545
V+ FG++L E+ + G P EE FK L+ G D +
Sbjct: 276 VWSFGVLLWEIFTLGGSPYPGVPVEELFK---------LLKEGHRMDKPSNC------TN 320
Query: 546 EIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
E+ +R C + P RP+ Q+ E L
Sbjct: 321 ELYMMMR---DCWHAVPSQRPTFKQLVEDL 347
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 30/143 (20%)
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMH 423
LV +++P+G L L + S +L +S+++ GM G+ R + H
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV------------H 150
Query: 424 QYISSNVILIDDDFDARITDFGLARLVG-------SRDPNDSSFVHGDLGEFGYVAPEYS 476
+ +++ IL++ + +I DFGLA+L+ R+P S + APE
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--------WYAPESL 202
Query: 477 STMVASLKGDVYGFGIVLLELLS 499
S + S + DV+ FG+VL EL +
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLS-ACKLSEKQ-FRSEMNRLGQL-RHPNLVPLLGFCVVEEE 364
+Y + DA+ +A+K L + L+E++ SE+ L L H N+V LLG C +
Sbjct: 65 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 124
Query: 365 RLLVYKHMPNGTLYSLLHGN-----------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L++ ++ G L + L + LD L ++G+A+L
Sbjct: 125 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GY 470
C +H+ +++ IL+ +I DFGLAR + NDS++V +
Sbjct: 185 ASKNC----IHRDLAARNILLTHGRITKICDFGLARHIK----NDSNYVVKGNARLPVKW 236
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+APE V + + DV+ +GI L EL S G P
Sbjct: 237 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 308 TGVSYKAV-LPDASALAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEER 365
+G Y A+ + +AI++++ + +K+ +E+ + + ++PN+V L +V +E
Sbjct: 33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+V +++ G+L D +D + + L +LH +H+
Sbjct: 93 WVVMEYLAGGSL--------TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 141
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
I S+ IL+ D ++TDFG + S V G ++APE + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAYGPKV 197
Query: 486 DVYGFGIVLLELLSGQKP 503
D++ GI+ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 30/143 (20%)
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM---GASRGLAWLHHGCQPPYMH 423
LV +++P+G L L + S +L +S+++ GM G+ R + H
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV------------H 137
Query: 424 QYISSNVILIDDDFDARITDFGLARLVG-------SRDPNDSSFVHGDLGEFGYVAPEYS 476
+ +++ IL++ + +I DFGLA+L+ R+P S + APE
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--------WYAPESL 189
Query: 477 STMVASLKGDVYGFGIVLLELLS 499
S + S + DV+ FG+VL EL +
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 318 DASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPN 374
+A +A+K L A + SEM + + +H N++ LLG C + ++ ++
Sbjct: 58 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 117
Query: 375 GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQ 424
G L L ++ + + + +RG+ +L C +H+
Sbjct: 118 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHR 173
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
+++ +L+ ++ +I DFGLAR + + D + +G L ++APE V + +
Sbjct: 174 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 231
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+++ E+ + G P EE FK L+ G D
Sbjct: 232 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK---------LLKEGHRMDKPANCT----- 277
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
+E+ +R C + P RP+ Q+ E L
Sbjct: 278 -NELYMMMR---DCWHAVPSQRPTFKQLVEDL 305
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER----LLVYKHMPNGTLYSLLHGNGVDNTLS 391
+FR E L HP +V + E +V +++ TL ++H
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TE 110
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
G + + + A + L + H Q +H+ + I+I ++ DFG+AR +
Sbjct: 111 GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
N + +G Y++PE + + DVY G VL E+L+G+ P
Sbjct: 168 DSG-NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 49 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 107
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 156
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 212
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 213 SDLWALGCIIYQLVAGLPPFR-AGNE 237
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 308 TGVSYKAV-LPDASALAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEER 365
+G Y A+ + +AI++++ + +K+ +E+ + + ++PN+V L +V +E
Sbjct: 34 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 93
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+V +++ G+L D +D + + L +LH +H+
Sbjct: 94 WVVMEYLAGGSL--------TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRD 142
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG 485
I S+ IL+ D ++TDFG + S V G ++APE + K
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV----GTPYWMAPEVVTRKAYGPKV 198
Query: 486 DVYGFGIVLLELLSGQKP 503
D++ GI+ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 318 DASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPN 374
+A +A+K L A + SEM + + +H N++ LLG C + ++ ++
Sbjct: 55 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 114
Query: 375 GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQ 424
G L L ++ + + + +RG+ +L C +H+
Sbjct: 115 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHR 170
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
+++ +L+ ++ +I DFGLAR + + D + +G L ++APE V + +
Sbjct: 171 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 228
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+++ E+ + G P EE FK L+ G D
Sbjct: 229 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK---------LLKEGHRMDKPANCT----- 274
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
+E+ +R C + P RP+ Q+ E L
Sbjct: 275 -NELYMMMR---DCWHAVPSQRPTFKQLVEDL 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ +
Sbjct: 67 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 184 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 242 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 283
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 284 FKQLVEDL 291
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIH 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ ++ G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 49 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 107
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 156
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 212
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 213 SDLWALGCIIYQLVAGLPPFR-AGNE 237
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSE---KQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
GV YKA +A+KR+ E E++ L +L HPN+V L+ E
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
LV++ M L D +G+ D ++ + RG+A H Q +H+
Sbjct: 95 TLVFEFMEKDLKKVL------DENKTGLQDSQIKIYL-YQLLRGVAHCH---QHRILHRD 144
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVASLK 484
+ +LI+ D ++ DFGLAR G S+ H ++ Y AP+ + S
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGI---PVRSYTH-EVVTLWYRAPDVLMGSKKYSTS 200
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ G + E+++G KPL
Sbjct: 201 VDIWSIGCIFAEMITG-KPL 219
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 38/272 (13%)
Query: 318 DASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPN 374
+A +A+K L A + SEM + + +H N++ LLG C + ++ ++
Sbjct: 112 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASK 171
Query: 375 GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL-HHGCQPPYMHQ 424
G L L ++ + + + +RG+ +L C +H+
Sbjct: 172 GNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHR 227
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
+++ +L+ ++ +I DFGLAR + + D + +G L ++APE V + +
Sbjct: 228 DLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGRL-PVKWMAPEALFDRVYTHQ 285
Query: 485 GDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGN 543
DV+ FG+++ E+ + G P EE FK L+ G D
Sbjct: 286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK---------LLKEGHRMDKPANCT----- 331
Query: 544 DDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
+E+ +R C + P RP+ Q+ E L
Sbjct: 332 -NELYMMMR---DCWHAVPSQRPTFKQLVEDL 359
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 49 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 107
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 108 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 156
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 212
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 213 SDLWALGCIIYQLVAGLPPFR-AGNE 237
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 48 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 106
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 107 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 155
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 211
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 212 SDLWALGCIIYQLVAGLPPFR-AGNE 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 51 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 109
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 158
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 214
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 215 SDLWALGCIIYQLVAGLPPFR-AGNE 239
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 330 CKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
C L K+ F SE + L HP++V L+G + EE ++ + P G L L N N
Sbjct: 48 CTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERN--KN 104
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH-GCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
+L + T + + + +A+L C +H+ I+ IL+ ++ DFGL+
Sbjct: 105 SLKVL----TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLS 156
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPL 504
R + D +S + +++PE + + DV+ F + + E+LS G++P
Sbjct: 157 RYIEDEDYYKASVTRLPI---KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER----LLVYKHMPNGTLYSLLHGNGVDNTLS 391
+FR E L HP +V + E +V +++ TL ++H
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-------TE 127
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
G + + + A + L + H Q +H+ + I+I ++ DFG+AR +
Sbjct: 128 GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 184
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
N + +G Y++PE + + DVY G VL E+L+G+ P
Sbjct: 185 DSG-NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 51 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 109
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 158
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 214
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 215 SDLWALGCIIYQLVAGLPPFR-AGNE 239
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLS-ACKLSEKQ-FRSEMNRLGQL-RHPNLVPLLGFCVVEEE 364
+Y + DA+ +A+K L + L+E++ SE+ L L H N+V LLG C +
Sbjct: 65 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 124
Query: 365 RLLVYKHMPNGTLYSLLHGN-----------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L++ ++ G L + L + LD L ++G+A+L
Sbjct: 125 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GY 470
C +H+ +++ IL+ +I DFGLAR + NDS++V +
Sbjct: 185 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKW 236
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+APE V + + DV+ +GI L EL S G P
Sbjct: 237 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLS-ACKLSEKQ-FRSEMNRLGQL-RHPNLVPLLGFCVVEEE 364
+Y + DA+ +A+K L + L+E++ SE+ L L H N+V LLG C +
Sbjct: 60 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 119
Query: 365 RLLVYKHMPNGTLYSLLHGN-----------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L++ ++ G L + L + LD L ++G+A+L
Sbjct: 120 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 179
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GY 470
C +H+ +++ IL+ +I DFGLAR + NDS++V +
Sbjct: 180 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKW 231
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+APE V + + DV+ +GI L EL S G P
Sbjct: 232 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 51 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 109
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 158
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 214
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 215 SDLWALGCIIYQLVAGLPPFR-AGNE 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 52 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 110
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 111 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 159
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 215
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 216 SDLWALGCIIYQLVAGLPPFR-AGNE 240
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 31/200 (15%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K + +L+ +K FR E+ + L HPN+V L E+ LV ++ G +
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
+ L +G W + ++ + + Q +H+ + + +L+D D
Sbjct: 94 FDYLVAHG----------WMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM 143
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGD-----LGEFGYVAPE-YSSTMVASLKGDVYGFG 491
+ +I DFG + + F G+ G Y APE + + DV+ G
Sbjct: 144 NIKIADFGFS----------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 193
Query: 492 IVLLELLSGQKPLDVAGAEE 511
++L L+SG P D +E
Sbjct: 194 VILYTLVSGSLPFDGQNLKE 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K + +L+ +K FR E+ + L HPN+V L E+ LV ++ G +
Sbjct: 43 VAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDD 436
+ L +G + + R + C Y+ H+ + + +L+D D
Sbjct: 102 FDYLVAHG-----------RMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGD 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVASLKGDVYGFGIVLL 495
+ +I DFG + + D+ G Y APE + + DV+ G++L
Sbjct: 151 MNIKIADFGFSNEFTVGNKLDTF-----CGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 205
Query: 496 ELLSGQKPLDVAGAEE 511
L+SG P D +E
Sbjct: 206 TLVSGSLPFDGQNLKE 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 51 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 109
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 158
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSAXKS 214
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ G ++ +L++G P
Sbjct: 215 SDLWALGCIIYQLVAGLPPF 234
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLS-ACKLSEKQ-FRSEMNRLGQL-RHPNLVPLLGFCVVEEE 364
+Y + DA+ +A+K L + L+E++ SE+ L L H N+V LLG C +
Sbjct: 58 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 117
Query: 365 RLLVYKHMPNGTLYSLLHGN-----------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L++ ++ G L + L + LD L ++G+A+L
Sbjct: 118 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 177
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GY 470
C +H+ +++ IL+ +I DFGLAR + NDS++V +
Sbjct: 178 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKW 229
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+APE V + + DV+ +GI L EL S G P
Sbjct: 230 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 319 ASALAIKRLSACKLSEKQFRSEMNR----------LGQLRHPNLVPLLGFCVVEEERLLV 368
A LA R A K+ EK+ + N+ + +L HP V L F ++E+L
Sbjct: 51 ARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYF 109
Query: 369 -YKHMPNGTLYSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ NG L + G D T TR S L +LH +H+ +
Sbjct: 110 GLSYAKNGELLKYIRKIGSFDET-------CTRFYTAEIVS-ALEYLHGKG---IIHRDL 158
Query: 427 SSNVILIDDDFDARITDFGLARLVG--SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
IL+++D +ITDFG A+++ S+ + FV G YV+PE + A
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV----GTAQYVSPELLTEKSACKS 214
Query: 485 GDVYGFGIVLLELLSGQKPLDVAGAE 510
D++ G ++ +L++G P AG E
Sbjct: 215 SDLWALGCIIYQLVAGLPPFR-AGNE 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 330 CKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
C L K+ F SE + L HP++V L+G + EE ++ + P G L L N N
Sbjct: 52 CTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERN--KN 108
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH-GCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
+L + T + + + +A+L C +H+ I+ IL+ ++ DFGL+
Sbjct: 109 SLKVL----TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLS 160
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPL 504
R + D +S + +++PE + + DV+ F + + E+LS G++P
Sbjct: 161 RYIEDEDYYKASVTRLPI---KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 34/248 (13%)
Query: 339 SEMNRLGQL-RHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN---GVDNTLSGVL 394
SEM + + +H N++ LLG C + ++ ++ G L L G++ +
Sbjct: 82 SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 395 DWSTRLR------IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ +L +RG+ +L +H+ +++ +L+ +D +I DFGLAR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVA 507
+ D + +G L ++APE + + + DV+ FG++L E+ + G P
Sbjct: 199 DIHHIDYYKKT-TNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
Query: 508 GAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPS 567
EE FK L+ G D +E+ +R C + P RP+
Sbjct: 257 PVEELFK---------LLKEGHRMDKPSNCT------NELYMMMR---DCWHAVPSQRPT 298
Query: 568 MYQVYESL 575
Q+ E L
Sbjct: 299 FKQLVEDL 306
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 17/178 (9%)
Query: 330 CKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
C L K+ F SE + L HP++V L+G + EE ++ + P G L L N N
Sbjct: 64 CTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERN--KN 120
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH-GCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
+L + T + + + +A+L C +H+ I+ IL+ ++ DFGL+
Sbjct: 121 SLKVL----TLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLS 172
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPL 504
R + D +S + +++PE + + DV+ F + + E+LS G++P
Sbjct: 173 RYIEDEDYYKASVTRLPI---KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ + G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 309 GVSYKAVLPDAS-ALAIKRLS-ACKLSEKQ-FRSEMNRLGQL-RHPNLVPLLGFCVVEEE 364
+Y + DA+ +A+K L + L+E++ SE+ L L H N+V LLG C +
Sbjct: 42 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101
Query: 365 RLLVYKHMPNGTLYSLLHGN-----------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L++ ++ G L + L + LD L ++G+A+L
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 161
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GY 470
C +H+ +++ IL+ +I DFGLAR + NDS++V +
Sbjct: 162 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKW 213
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
+APE V + + DV+ +GI L EL S G P
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY-SSTMV 480
+H+ + +L+DD+ + +I DFGL+ ++ D +F+ G Y APE + +
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 481 ASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLV 525
A + DV+ GIVL +L G+ P D + F NL VN V
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFD-----DEFIPNLFKKVNSCV 224
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + H N+V + +V +E +V + + G L +
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + R L++LH+ +H+ I S+ IL+ D
Sbjct: 133 VTHTRMNEEQIATVC---------LSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRI 180
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 181 KLSDFGFCAQVSKEVPKRKXLV----GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 500 GQKP 503
G+ P
Sbjct: 237 GEPP 240
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 40/212 (18%)
Query: 311 SYKAVLPDASALAIKRLSACKL-------SEKQ-FRSEMNRLGQLRHPNLVPLLGF---- 358
S+K V ++ C+L SE+Q F+ E L L+HPN+V
Sbjct: 38 SFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWEST 97
Query: 359 -----CVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
C+V LV + +GTL + L V + + W ++ +GL +L
Sbjct: 98 VKGKKCIV-----LVTELXTSGTLKTYLKRFKVXK-IKVLRSWCRQI------LKGLQFL 145
Query: 414 HHGCQPPYMHQYIS-SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
H PP +H+ + N+ + +I D GLA L +SF +G + A
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL------KRASFAKAVIGTPEFXA 198
Query: 473 PE-YSSTMVASLKGDVYGFGIVLLELLSGQKP 503
PE Y S+ DVY FG LE + + P
Sbjct: 199 PEXYEEKYDESV--DVYAFGXCXLEXATSEYP 228
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 322 LAIKRLSACKLSEKQ-FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
LA K + + +K+ ++E++ + QL H NL+ L + + +LV +++ G L+
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 381 LHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA- 439
+ + T + + ++ G+ + LH +P N++ ++ D
Sbjct: 177 IIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKP--------ENILCVNRDAKQI 228
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+I DFGLAR R+ +F G ++APE + S D++ G++ LLS
Sbjct: 229 KIIDFGLARRYKPREKLKVNF-----GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
Query: 500 GQKPL 504
G P
Sbjct: 284 GLSPF 288
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 334 EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGV 393
+K FR E+ + L HPN+V L E+ LV ++ G ++ L +G
Sbjct: 58 QKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------- 108
Query: 394 LDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDDFDARITDFGLARLVGS 452
+ + R + C ++ H+ + + +L+D D + +I DFG +
Sbjct: 109 ---RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 453 RDPNDSSFVHGD-LGEF----GYVAPE-YSSTMVASLKGDVYGFGIVLLELLSGQKPLDV 506
+ F G+ L EF Y APE + + DV+ G++L L+SG P D
Sbjct: 161 -----NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
Query: 507 AGAEE 511
+E
Sbjct: 216 QNLKE 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 39/292 (13%)
Query: 298 AVENIIISTRTGVSYKAVLPDASALAIKRLS--ACKLSEKQFRSEMNRLGQL-RHPNLVP 354
A ++++ G+ K +A +A+K L A + SEM + + +H N++
Sbjct: 47 AFGQVVMAEAVGID-KDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMG 405
LLG C + ++ + G L L ++ + + +
Sbjct: 106 LLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 406 ASRGLAWL-HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+RG+ +L C +H+ +++ +L+ ++ +I DFGLAR + + D + +G
Sbjct: 166 LARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT-TNGR 220
Query: 465 LGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
L ++APE V + + DV+ FG+++ E+ + G P EE FK
Sbjct: 221 L-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK--------- 270
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
L+ G D +E+ +R C + P RP+ Q+ E L
Sbjct: 271 LLKEGHRMDKPANCT------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 313
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 318 DASAL-AIKRLSACKLSEK-QFRSEMNR--LGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
DA L A+K L L + + R++M R L ++ HP +V L E + L+ +
Sbjct: 50 DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR 109
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
G L++ L V T V + L + + L ++ +P IL+
Sbjct: 110 GGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKP---------ENILL 159
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D++ ++TDFGL++ + SF G Y+APE + + D + FG++
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFC----GTVEYMAPEVVNRRGHTQSADWWSFGVL 215
Query: 494 LLELLSGQKPL 504
+ E+L+G P
Sbjct: 216 MFEMLTGTLPF 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 318 DASAL-AIKRLSACKLSEK-QFRSEMNR--LGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
DA L A+K L L + + R++M R L ++ HP +V L E + L+ +
Sbjct: 50 DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR 109
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
G L++ L V T V + L + + L ++ +P IL+
Sbjct: 110 GGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKP---------ENILL 159
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D++ ++TDFGL++ + SF G Y+APE + + D + FG++
Sbjct: 160 DEEGHIKLTDFGLSKESIDHEKKAYSFC----GTVEYMAPEVVNRRGHTQSADWWSFGVL 215
Query: 494 LLELLSGQKPL 504
+ E+L+G P
Sbjct: 216 MFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 318 DASAL-AIKRLSACKLSEK-QFRSEMNR--LGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
DA L A+K L L + + R++M R L ++ HP +V L E + L+ +
Sbjct: 51 DARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLR 110
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
G L++ L V T V + L + + L ++ +P IL+
Sbjct: 111 GGDLFTRL-SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKP---------ENILL 160
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D++ ++TDFGL++ + SF G Y+APE + + D + FG++
Sbjct: 161 DEEGHIKLTDFGLSKESIDHEKKAYSFC----GTVEYMAPEVVNRRGHTQSADWWSFGVL 216
Query: 494 LLELLSGQKPL 504
+ E+L+G P
Sbjct: 217 MFEMLTGTLPF 227
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 29/199 (14%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+AIK + +L+ +K FR E+ + L HPN+V L E+ L+ ++ G +
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 101
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDF 437
+ L +G + + R + S + + H Q +H+ + + +L+D D
Sbjct: 102 FDYLVAHG------RMKEKEARSKFRQIVS-AVQYCH---QKRIVHRDLKAENLLLDADM 151
Query: 438 DARITDFGLARLVGSRDPNDSSFVHGDLGEF----GYVAPE-YSSTMVASLKGDVYGFGI 492
+ +I DFG + + V G L F Y APE + + DV+ G+
Sbjct: 152 NIKIADFGFS---------NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 493 VLLELLSGQKPLDVAGAEE 511
+L L+SG P D +E
Sbjct: 203 ILYTLVSGSLPFDGQNLKE 221
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 307 RTGVSYKAVLPDASALAI--KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEE 364
+ ++Y AL I K++ A + + E++ L LRHP+++ L ++E
Sbjct: 19 KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE 78
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
++V ++ N ++ + + + R + + H + +H+
Sbjct: 79 IIMVIEYAGNELFDYIVQRDKMSEQEAR--------RFFQQIISAVEYCH---RHKIVHR 127
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY-SSTMVASL 483
+ +L+D+ + +I DFGL+ ++ D +F+ G Y APE S + A
Sbjct: 128 DLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 484 KGDVYGFGIVLLELLSGQKPLD 505
+ DV+ G++L +L + P D
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFD 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 107
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 108 ------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 156
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 157 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 307 RTGVSYKAVLPDASALAI--KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEE 364
+ ++Y AL I K++ A + + E++ L LRHP+++ L ++E
Sbjct: 23 KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE 82
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
++V ++ N ++ + + + R + + H + +H+
Sbjct: 83 IIMVIEYAGNELFDYIVQRDKMSEQEAR--------RFFQQIISAVEYCH---RHKIVHR 131
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY-SSTMVASL 483
+ +L+D+ + +I DFGL+ ++ D +F+ G Y APE S + A
Sbjct: 132 DLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 484 KGDVYGFGIVLLELLSGQKPLD 505
+ DV+ G++L +L + P D
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFD 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+AIK + +L+ +K FR E+ + L HPN+V L E+ L+ ++ G +
Sbjct: 40 VAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEV 98
Query: 378 YSLL--HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
+ L HG + + ++ R + A + + H Q +H+ + + +L+D
Sbjct: 99 FDYLVAHGRMKEK------EARSKFRQIVSA---VQYCH---QKRIVHRDLKAENLLLDA 146
Query: 436 DFDARITDFGLARLVGSRDPNDSSFVHGDLGEF----GYVAPE-YSSTMVASLKGDVYGF 490
D + +I DFG + + V G L F Y APE + + DV+
Sbjct: 147 DMNIKIADFGFS---------NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 197
Query: 491 GIVLLELLSGQKPLDVAGAEE 511
G++L L+SG P D +E
Sbjct: 198 GVILYTLVSGSLPFDGQNLKE 218
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 19/202 (9%)
Query: 307 RTGVSYKAVLPDASALAI--KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEE 364
+ ++Y AL I K++ A + + E++ L LRHP+++ L ++E
Sbjct: 28 KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE 87
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
++V ++ N ++ + + + R + + H + +H+
Sbjct: 88 IIMVIEYAGNELFDYIVQRDKMSEQEAR--------RFFQQIISAVEYCH---RHKIVHR 136
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY-SSTMVASL 483
+ +L+D+ + +I DFGL+ ++ D +F+ G Y APE S + A
Sbjct: 137 DLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 484 KGDVYGFGIVLLELLSGQKPLD 505
+ DV+ G++L +L + P D
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 307 RTGVSYKAVLPDASALAI--KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEE 364
+ ++Y AL I K++ A + + E++ L LRHP+++ L ++E
Sbjct: 29 KVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE 88
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
++V ++ N ++ + + + R R + + H + +H+
Sbjct: 89 IIMVIEYAGNELFDYIVQRDKMS-------EQEAR-RFFQQIISAVEYCH---RHKIVHR 137
Query: 425 YISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY-SSTMVASL 483
+ +L+D+ + +I DFGL+ ++ D +F+ G Y APE S + A
Sbjct: 138 DLKPENLLLDEHLNVKIADFGLSNIM-----TDGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 484 KGDVYGFGIVLLELLSGQKPLD 505
+ DV+ G++L +L + P D
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K + +L+ +K FR E+ + L HPN+V L E+ LV ++ G +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDD 436
+ L +G + + R + C ++ H+ + + +L+D D
Sbjct: 101 FDYLVAHG-----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGD-----LGEFGYVAPE-YSSTMVASLKGDVYGF 490
+ +I DFG + + F G+ G Y APE + + DV+
Sbjct: 150 MNIKIADFGFS----------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 491 GIVLLELLSGQKPLDVAGAEE 511
G++L L+SG P D +E
Sbjct: 200 GVILYTLVSGSLPFDGQNLKE 220
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 169
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 170 ------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 218
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 219 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K + +L+ +K FR E+ + L HPN+V L E+ LV ++ G +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDD 436
+ L +G + + R + C ++ H+ + + +L+D D
Sbjct: 101 FDYLVAHG-----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGD-----LGEFGYVAPE-YSSTMVASLKGDVYGF 490
+ +I DFG + + F G+ G Y APE + + DV+
Sbjct: 150 MNIKIADFGFS----------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199
Query: 491 GIVLLELLSGQKPLDVAGAEE 511
G++L L+SG P D +E
Sbjct: 200 GVILYTLVSGSLPFDGQNLKE 220
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 107
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 108 ------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 156
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 157 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 107
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 108 ------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 156
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 157 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 107
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 108 ------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 156
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 157 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 29/199 (14%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K + +L+ +K FR E+ + L HPN+V L E+ LV ++ G +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDD 436
+ L +G + + R + C ++ H+ + + +L+D D
Sbjct: 101 FDYLVAHG-----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 437 FDARITDFGLARLVGSRDPNDSSF---VHGDLGEFGYVAPE-YSSTMVASLKGDVYGFGI 492
+ +I DFG + N+ +F + G Y APE + + DV+ G+
Sbjct: 150 MNIKIADFGFS--------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 493 VLLELLSGQKPLDVAGAEE 511
+L L+SG P D +E
Sbjct: 202 ILYTLVSGSLPFDGQNLKE 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 134
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 135 ------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 183
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 184 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 19/178 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 50 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 107
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 108 ------KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 156
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+ A+E
Sbjct: 157 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVA 164
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVL 494
DF +I DFG+ R + D L ++APE V + D++ FG+VL
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKG--GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 495 LELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVA 554
E+ S AE+ ++G + V V+ G D D + + +R+
Sbjct: 223 WEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMRM- 267
Query: 555 CSCVVSRPKDRPSMYQVYESLK 576
C PK RP+ ++ LK
Sbjct: 268 --CWQFNPKMRPTFLEIVNLLK 287
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 306 TRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQL-RHPNLVPLLGFCVVEEE 364
++TGVS + A+ + + A + SE+ + QL H N+V LLG C +
Sbjct: 70 SKTGVSIQV------AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123
Query: 365 RLLVYKHMPNGTLYSLLHGN---------GVDNTLS-------GVLDWSTRLRIGMGASR 408
L++++ G L + L +N VL + L ++
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 409 GLAWLH-HGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
G+ +L C +H+ +++ +L+ +I DFGLAR + S DS++V
Sbjct: 184 GMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMS----DSNYVVRGNAR 235
Query: 468 F--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
++APE + ++K DV+ +GI+L E+ S
Sbjct: 236 LPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
++ ++E+ QL+HP+++ L + LV + NG + L N +
Sbjct: 56 QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFS 110
Query: 395 DWSTRLRIGMGASRGLAWLH-HGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSR 453
+ R + + G+ +LH HG +H+ ++ + +L+ + + +I DFGLA + +
Sbjct: 111 ENEARHFMHQIIT-GMLYLHSHGI----LHRDLTLSNLLLTRNMNIKIADFGLATQL--K 163
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
P++ + G Y++PE ++ L+ DV+ G + LL G+ P D +
Sbjct: 164 MPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221
Query: 514 -KGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRP 562
K L D+ ++ ++D++ + L D R++ S V+ P
Sbjct: 222 NKVVLADYEMPSFLSIEAKDLIHQLLRRNPAD-------RLSLSSVLDHP 264
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 27/262 (10%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 45 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 104
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 105 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVA 161
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVL 494
DF +I DFG+ R + D L ++APE V + D++ FG+VL
Sbjct: 162 HDFTVKIGDFGMTRDIXETDXXRKG--GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 219
Query: 495 LELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVA 554
E+ S AE+ ++G + V V+ G D D + + +R+
Sbjct: 220 WEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMRM- 264
Query: 555 CSCVVSRPKDRPSMYQVYESLK 576
C PK RP+ ++ LK
Sbjct: 265 --CWQFNPKMRPTFLEIVNLLK 284
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL+DD RI+D GLA V + + G +G GY+APE + D +
Sbjct: 317 ILLDDHGHIRISDLGLAVHV-----PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 491 GIVLLELLSGQKPL 504
G +L E+++GQ P
Sbjct: 372 GCLLYEMIAGQSPF 385
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 31/264 (11%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVA 164
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYGFGI 492
DF +I DFG+ R + D + G G ++APE V + D++ FG+
Sbjct: 165 HDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 493 VLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLR 552
VL E+ S AE+ ++G + V V+ G D D + + +R
Sbjct: 221 VLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMR 266
Query: 553 VACSCVVSRPKDRPSMYQVYESLK 576
+ C PK RP+ ++ LK
Sbjct: 267 M---CWQFNPKMRPTFLEIVNLLK 287
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEK--QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL 366
G YKA + S LA ++ K E+ + E++ L HPN+V LL E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ L G VD + + T +I + + L L++ +H+ +
Sbjct: 111 I---------LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 427 SSNVILIDDDFDARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPEY-----SS 477
+ IL D D ++ DFG++ R + RD SF+ G ++APE S
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRD----SFI----GTPYWMAPEVVMCETSK 213
Query: 478 TMVASLKGDVYGFGIVLLELLSGQKP 503
K DV+ GI L+E+ + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 29/185 (15%)
Query: 334 EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGV 393
+K FR E+ + L HPN+V L E+ LV ++ G ++ L +G
Sbjct: 58 QKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------- 108
Query: 394 LDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDDFDARITDFGLARLVGS 452
+ + R + C ++ H+ + + +L+D D + +I DFG +
Sbjct: 109 ---RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS----- 160
Query: 453 RDPNDSSFVHGD-----LGEFGYVAPE-YSSTMVASLKGDVYGFGIVLLELLSGQKPLDV 506
+ F G+ G Y APE + + DV+ G++L L+SG P D
Sbjct: 161 -----NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
Query: 507 AGAEE 511
+E
Sbjct: 216 QNLKE 220
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
IL+DD RI+D GLA V + + G +G GY+APE + D +
Sbjct: 317 ILLDDHGHIRISDLGLAVHV-----PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 491 GIVLLELLSGQKPL 504
G +L E+++GQ P
Sbjct: 372 GCLLYEMIAGQSPF 385
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 28/206 (13%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEK--QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL 366
G YKA + S LA ++ K E+ + E++ L HPN+V LL E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ L G VD + + T +I + + L L++ +H+ +
Sbjct: 111 I---------LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 427 SSNVILIDDDFDARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPEY-----SS 477
+ IL D D ++ DFG++ R + RD SF+ G ++APE S
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRD----SFI----GTPYWMAPEVVMCETSK 213
Query: 478 TMVASLKGDVYGFGIVLLELLSGQKP 503
K DV+ GI L+E+ + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 36/208 (17%)
Query: 308 TGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
TG Y A + +RLS+ + +S ++ E+N L ++RHPN++ L + +
Sbjct: 36 TGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 90
Query: 366 LLVYKHMPNGTLYSL------LHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQP 419
+L+ + + G L+ L + L +LD L S+ +A H +P
Sbjct: 91 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH-----SKRIA--HFDLKP 143
Query: 420 PYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS 476
N++L+D + ++ DFG+A + + + + F G +VAPE
Sbjct: 144 --------ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-----GTPEFVAPEIV 190
Query: 477 STMVASLKGDVYGFGIVLLELLSGQKPL 504
+ L+ D++ G++ LLSG P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 36/208 (17%)
Query: 308 TGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
TG Y A + +RLS+ + +S ++ E+N L ++RHPN++ L + +
Sbjct: 29 TGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83
Query: 366 LLVYKHMPNGTLYSL------LHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQP 419
+L+ + + G L+ L + L +LD L S+ +A H +P
Sbjct: 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH-----SKRIA--HFDLKP 136
Query: 420 PYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS 476
N++L+D + ++ DFG+A + + + + F G +VAPE
Sbjct: 137 --------ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-----GTPEFVAPEIV 183
Query: 477 STMVASLKGDVYGFGIVLLELLSGQKPL 504
+ L+ D++ G++ LLSG P
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+G+ +LH+ +H+ + + ++DD D +I DFGLA + + G
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC----GT 205
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
Y+APE S + D++ G +L LL G+ P + + +E +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPL 355
+F+V + TG+ + A + + K+LSA + + + + R +L+HPN+V L
Sbjct: 17 AFSVVRRCVHKTTGLEFAAKI-----INTKKLSARDFQKLEREARICR--KLQHPNIVRL 69
Query: 356 LGFCVVEEERLLVYKHMPNGTLYS------LLHGNGVDNTLSGVLDWSTRLRIGMGASRG 409
E LV+ + G L+ + + +L+ I S G
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-----SIAYCHSNG 124
Query: 410 LAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDPNDSSFVHGDLGE 467
+ +H +P N++L A ++ DFGLA V NDS HG G
Sbjct: 125 I--VHRNLKP--------ENLLLASKAKGAAVKLADFGLAIEV-----NDSEAWHGFAGT 169
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
GY++PE S D++ G++L LL G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 31/264 (11%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 47 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 106
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 107 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVA 163
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYGFGI 492
DF +I DFG+ R + D + G G ++APE V + D++ FG+
Sbjct: 164 HDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 219
Query: 493 VLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLR 552
VL E+ S AE+ ++G + V V+ G D D + + +R
Sbjct: 220 VLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMR 265
Query: 553 VACSCVVSRPKDRPSMYQVYESLK 576
+ C PK RP+ ++ LK
Sbjct: 266 M---CWQFNPKMRPTFLEIVNLLK 286
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+G+ +LH+ +H+ + + ++DD D +I DFGLA ++ D G
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA----TKIEFDGERKKDLCGT 189
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
Y+APE S + D++ G +L LL G+ P + + +E +
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 235
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPL 355
+F+V + TG+ + A + + K+LSA + + + + R +L+HPN+V L
Sbjct: 18 AFSVVRRCVHKTTGLEFAAKI-----INTKKLSARDFQKLEREARICR--KLQHPNIVRL 70
Query: 356 LGFCVVEEERLLVYKHMPNGTLYS------LLHGNGVDNTLSGVLDWSTRLRIGMGASRG 409
E LV+ + G L+ + + +L+ I S G
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-----SIAYCHSNG 125
Query: 410 LAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDPNDSSFVHGDLGE 467
+ +H +P N++L A ++ DFGLA V NDS HG G
Sbjct: 126 I--VHRNLKP--------ENLLLASKAKGAAVKLADFGLAIEV-----NDSEAWHGFAGT 170
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
GY++PE S D++ G++L LL G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 127/302 (42%), Gaps = 44/302 (14%)
Query: 283 VKVKLADLLAATNSFAVENIIISTRTGVSYKAVLPDASA----LAIKRLSACKLSE---K 335
+K KL D+L F + ++ G +A L +A+K L A ++ +
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE 70
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEER------LLVYKHMPNGTLYSLLHGNGV-DN 388
+F E + + HP++ L+G + + +++ M +G L++ L + + +N
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
+ L T +R + + G+ +L ++H+ +++ ++ +D + DFGL+R
Sbjct: 131 PFN--LPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 449 LVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLD 505
+ S D + G + ++A E + + ++ DV+ FG+ + E+++ GQ P
Sbjct: 186 KIYSGD----YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP-- 239
Query: 506 VAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDR 565
AG E N + N L + V +Y C + PK R
Sbjct: 240 YAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMY----------------QCWSADPKQR 283
Query: 566 PS 567
PS
Sbjct: 284 PS 285
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPL 355
+F+V + TG+ + A + + K+LSA + + + + R +L+HPN+V L
Sbjct: 18 AFSVVRRCVHKTTGLEFAAKI-----INTKKLSARDFQKLEREARICR--KLQHPNIVRL 70
Query: 356 LGFCVVEEERLLVYKHMPNGTLYS------LLHGNGVDNTLSGVLDWSTRLRIGMGASRG 409
E LV+ + G L+ + + +L+ I S G
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-----SIAYCHSNG 125
Query: 410 LAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDPNDSSFVHGDLGE 467
+ +H +P N++L A ++ DFGLA V NDS HG G
Sbjct: 126 I--VHRNLKP--------ENLLLASKAKGAAVKLADFGLAIEV-----NDSEAWHGFAGT 170
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
GY++PE S D++ G++L LL G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 150
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 151 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 206 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + +H N+V + +V +E +V + + G L +
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + + L+ LH +H+ I S+ IL+ D
Sbjct: 117 VTHTRMNEEQIAAVC---------LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 164
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 165 KLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
Query: 500 GQKP 503
G+ P
Sbjct: 221 GEPP 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 139
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 140 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 195 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 228
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLV---GSRDPNDSSFVHGD 464
+G+ +LH+ +H+ + + ++DD D +I DFGLA + G R D
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--------KD 201
Query: 465 L-GEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
L G Y+APE S + D++ G +L LL G+ P + + +E +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + +H N+V + +V +E +V + + G L +
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + + L+ LH +H+ I S+ IL+ D
Sbjct: 119 VTHTRMNEEQIAAVC---------LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 166
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 167 KLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
Query: 500 GQKP 503
G+ P
Sbjct: 223 GEPP 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+G+ +LH+ +H+ + + ++DD D +I DFGLA ++ D G
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA----TKIEFDGERKKXLCGT 205
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
Y+APE S + D++ G +L LL G+ P + + +E +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 143
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 144 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 199 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 232
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + +H N+V + +V +E +V + + G L +
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + + L+ LH +H+ I S+ IL+ D
Sbjct: 108 VTHTRMNEEQIAAVC---------LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 155
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 156 KLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
Query: 500 GQKP 503
G+ P
Sbjct: 212 GEPP 215
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 135
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 136 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 191 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 224
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 126
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 127 ------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 175
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
D +SFV G Y++PE S++ D++ G+ L+E+ G+ P+
Sbjct: 176 DSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 132
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 133 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 188 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 338 RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS 397
+ E+ L Q P + G + + + ++ +++ G+ LL +D T +
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET-----QIA 107
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
T LR + +GL +LH + +H+ I + +L+ + + ++ DFG+A +
Sbjct: 108 TILREIL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
++FV G ++APE K D++ GI +EL G+ P
Sbjct: 162 NTFV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 143
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 144 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 199 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + +H N+V + +V +E +V + + G L +
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + + L+ LH +H+ I S+ IL+ D
Sbjct: 112 VTHTRMNEEQIAAVC---------LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 159
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 160 KLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
Query: 500 GQKP 503
G+ P
Sbjct: 216 GEPP 219
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 165
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 166 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 221 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 254
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 338 RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS 397
+ E+ L Q P + G + + ++ +++ G+ LL ++ T +
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----A 119
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
T LR + +GL +LH + +H+ I + +L+ + D ++ DFG+A +
Sbjct: 120 TILREIL---KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 173
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
+ FV G ++APE K D++ GI +EL G+ P
Sbjct: 174 NXFV----GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 27/214 (12%)
Query: 293 ATNSFAVENIIISTRTGVSYK-AVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPN 351
T SF ++I S G Y VL + +K++ E L + HP
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN-------DERLMLSIVTHPF 67
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLH-GNGVDNTLSGVLDWSTRLRIGMGASRGL 410
++ + G ++ ++ ++ G L+SLL N ++ L
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY--------AAEVCLAL 119
Query: 411 AWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGY 470
+LH +++ + IL+D + +ITDFG A+ V + G Y
Sbjct: 120 EYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV-------PDVTYXLCGTPDY 169
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+APE ST + D + FGI++ E+L+G P
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 338 RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS 397
+ E+ L Q P + G + + + ++ +++ G+ LL +D T +
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET-----QIA 127
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
T LR + +GL +LH + +H+ I + +L+ + + ++ DFG+A +
Sbjct: 128 TILREIL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 181
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
++FV G ++APE K D++ GI +EL G+ P
Sbjct: 182 NTFV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 99/206 (48%), Gaps = 33/206 (16%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEKQFRS-EMNRLGQLRHPNLVPLLGFCVVEEERL- 366
GV ++A L ++ +AIK++ L +K+F++ E+ + ++HPN+V L F ++
Sbjct: 54 GVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKD 109
Query: 367 -----LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GASRGLAWLHHG--CQ 418
LV +++P + H + T+ +L +++ M R LA++H C
Sbjct: 110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL-----IKLYMYQLLRSLAYIHSIGIC- 163
Query: 419 PPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV--HGDLGEFGYVAPEY 475
H+ I +L+D ++ DFG A+++ + +PN S + E + A Y
Sbjct: 164 ----HRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNY 219
Query: 476 SSTMVASLKGDVYGFGIVLLELLSGQ 501
++ + D++ G V+ EL+ GQ
Sbjct: 220 TTNI------DIWSTGCVMAELMQGQ 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K + +L+ +K FR E+ L HPN+V L E+ LV ++ G +
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEV 100
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYM-HQYISSNVILIDDD 436
+ L +G + + R + C ++ H+ + + +L+D D
Sbjct: 101 FDYLVAHG-----------RXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDAD 149
Query: 437 FDARITDFGLARLVGSRDPNDSSF---VHGDLGEFGYVAPE-YSSTMVASLKGDVYGFGI 492
+ +I DFG + N+ +F + G Y APE + + DV+ G+
Sbjct: 150 XNIKIADFGFS--------NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 493 VLLELLSGQKPLDVAGAEE 511
+L L+SG P D +E
Sbjct: 202 ILYTLVSGSLPFDGQNLKE 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 33/265 (12%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVA 164
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGD---LGEFGYVAPEYSSTMVASLKGDVYGFG 491
DF +I DFG+ +RD ++++ L ++APE V + D++ FG
Sbjct: 165 HDFTVKIGDFGM-----TRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
Query: 492 IVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFL 551
+VL E+ S AE+ ++G + V V+ G D D + + +
Sbjct: 220 VVLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLM 265
Query: 552 RVACSCVVSRPKDRPSMYQVYESLK 576
R+ C PK RP+ ++ LK
Sbjct: 266 RM---CWQFNPKMRPTFLEIVNLLK 287
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 144
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 145 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 200 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 233
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 165
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 166 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 221 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 254
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 49 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 108
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 109 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVA 165
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYGFGI 492
DF +I DFG+ R + D + G G ++APE V + D++ FG+
Sbjct: 166 HDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 221
Query: 493 VLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLR 552
VL E+ S AE+ ++G + V V+ G D D + + +R
Sbjct: 222 VLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMR 267
Query: 553 VACSCVVSRPKDRPSMYQVYESLK 576
+ C P RP+ ++ LK
Sbjct: 268 M---CWQFNPNMRPTFLEIVNLLK 288
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 20/186 (10%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ RL HPN+V L+ C E + LV++H+ + L + L D L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLP 110
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
T + RGL +LH C +H+ + IL+ ++ DFGLAR+ +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 456 NDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKG 515
D V Y APE + D++ G + E+ +KPL +E G
Sbjct: 168 LDPVVV-----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 221
Query: 516 NLVDWV 521
+ D +
Sbjct: 222 KIFDLI 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + +H N+V + +V +E +V + + G L +
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + + L+ LH +H+ I S+ IL+ D
Sbjct: 239 VTHTRMNEEQIAAVC---------LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 286
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 287 KLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 342
Query: 500 GQKP 503
G+ P
Sbjct: 343 GEPP 346
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 31/264 (11%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVA 164
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYGFGI 492
DF +I DFG+ R + D + G G ++APE V + D++ FG+
Sbjct: 165 HDFTVKIGDFGMTRDIYETD----YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGV 220
Query: 493 VLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLR 552
VL E+ S AE+ ++G + V V+ G D D + + +R
Sbjct: 221 VLWEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMR 266
Query: 553 VACSCVVSRPKDRPSMYQVYESLK 576
+ C P RP+ ++ LK
Sbjct: 267 M---CWQFNPNMRPTFLEIVNLLK 287
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 159
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 160 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 215 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 248
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 167
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 168 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 223 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 30/218 (13%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 169
Query: 407 SRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV--HG 463
R LA++H H+ I +L+D D ++ DFG A+ + +PN S +
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 226
Query: 464 DLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 227 RAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 258
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 322 LAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL 380
+A+K++ K ++ +E+ + +H N+V + +V +E +V + + G L +
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 381 L-HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA 439
+ H + ++ V + + L+ LH +H+ I S+ IL+ D
Sbjct: 162 VTHTRMNEEQIAAVC---------LAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 209
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+++DFG V P V G ++APE S + + D++ GI+++E++
Sbjct: 210 KLSDFGFCAQVSKEVPRRKXLV----GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 265
Query: 500 GQKP 503
G+ P
Sbjct: 266 GEPP 269
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 338 RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS 397
+ E+ L Q P + G + + + ++ +++ G+ LL +D T +
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET-----QIA 122
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
T LR + +GL +LH + +H+ I + +L+ + + ++ DFG+A +
Sbjct: 123 TILREIL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
+ FV G ++APE K D++ GI +EL G+ P
Sbjct: 177 NXFV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 136
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 137 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 192 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 30/202 (14%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSE---KQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
GV YKA A+K++ K E E++ L +L+H N+V L ++
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+LV++H+ + L LL + G L+ T + G+A+ H +H+
Sbjct: 76 VLVFEHL-DQDLKKLL------DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-------YSST 478
+ +LI+ + + +I DFGLAR G + H ++ Y AP+ YS+T
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGI---PVRKYTH-EIVTLWYRAPDVLMGSKKYSTT 181
Query: 479 MVASLKGDVYGFGIVLLELLSG 500
+ D++ G + E+++G
Sbjct: 182 I------DIWSVGCIFAEMVNG 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 338 RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS 397
+ E+ L Q P + G + + + ++ +++ G+ LL +D T +
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDET-----QIA 107
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
T LR + +GL +LH + +H+ I + +L+ + + ++ DFG+A +
Sbjct: 108 TILREIL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
+ FV G ++APE K D++ GI +EL G+ P
Sbjct: 162 NXFV----GTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 416 GCQPPYMHQYISSNV----ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
GCQ + ++ I ++ + +++D + +I DFGLA V + G Y+
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC----GTPNYI 184
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
APE S S + DV+ G ++ LL G+ P + + +E +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 376 TLYSLLHGNGVDNTLSGV-LDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
L L G + + +S V L+ + + LA+LH +H+ I S+ IL+
Sbjct: 119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLT 175
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVL 494
D +++DFG + P V G ++APE S + + + D++ GI++
Sbjct: 176 LDGRVKLSDFGFCAQISKDVPKRKXLV----GTPYWMAPEVISRSLYATEVDIWSLGIMV 231
Query: 495 LELLSGQKP 503
+E++ G+ P
Sbjct: 232 IEMVDGEPP 240
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 28/206 (13%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEK--QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL 366
G YKA + S LA ++ K E+ + E++ L HPN+V LL E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ L G VD + + T +I + + L L++ +H+ +
Sbjct: 111 I---------LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 427 SSNVILIDDDFDARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPEY-----SS 477
+ IL D D ++ DFG++ R + RD F+ G ++APE S
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRD----XFI----GTPYWMAPEVVMCETSK 213
Query: 478 TMVASLKGDVYGFGIVLLELLSGQKP 503
K DV+ GI L+E+ + P
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 416 GCQPPYMHQYISSNV----ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
GCQ + ++ I ++ + +++D + +I DFGLA V + G Y+
Sbjct: 129 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC----GTPNYI 184
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
APE S S + DV+ G ++ LL G+ P + + +E +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 47/291 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 36 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 95
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 96 GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 155
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
+H+ +++ IL+ + +I DFGLAR + +DP+ L ++AP
Sbjct: 156 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARL-PLKWMAP 210
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRD 532
E V +++ DV+ FG++L E+ S G P +E F L + R+ D
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPD 265
Query: 533 VVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+Y + C P RP+ ++ E L ++ + +
Sbjct: 266 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 20 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 134 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 180
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGKFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 416 GCQPPYMHQYISSNV----ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
GCQ + ++ I ++ + +++D + +I DFGLA V + G Y+
Sbjct: 133 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC----GTPNYI 188
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
APE S S + DV+ G ++ LL G+ P + + +E +
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 230
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 112/262 (42%), Gaps = 27/262 (10%)
Query: 320 SALAIKRLS-ACKLSEK-QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+ +A+K ++ + L E+ +F +E + + ++V LLG + L+V + M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 378 YSLLHG---NGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
S L +N +++ + G+A+L+ ++H+ +++ ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVA 164
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVL 494
DF +I DFG+ R + D L ++APE V + D++ FG+VL
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKG--GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Query: 495 LELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVA 554
E+ S AE+ ++G + V V+ G D D + + +R+
Sbjct: 223 WEITS--------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNC------PERVTDLMRM- 267
Query: 555 CSCVVSRPKDRPSMYQVYESLK 576
C P RP+ ++ LK
Sbjct: 268 --CWQFNPNMRPTFLEIVNLLK 287
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPL 355
+F+V + TG+ + A + + K+LSA + + + + R +L+HPN+V L
Sbjct: 41 AFSVVRRCVHKTTGLEFAAKI-----INTKKLSARDFQKLEREARICR--KLQHPNIVRL 93
Query: 356 LGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLR-----IGMGASRGL 410
E LV+ + G L+ + V D S ++ I S G+
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDI----VAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 411 AWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
+H +P N++L A ++ DFGLA V NDS HG G
Sbjct: 150 --VHRNLKP--------ENLLLASKAKGAAVKLADFGLAIEV-----NDSEAWHGFAGTP 194
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
GY++PE S D++ G++L LL G P
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 27/247 (10%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T +F V + + TG ++ A ++ + ++ R E+ + LRHP L
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKF---------VMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 353 VPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
V L + E +++Y+ M G L+ + + +++ ++ +GL
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV------CKGLCH 270
Query: 413 LHHGCQPPYMHQYISSNVILIDDDF--DARITDFGLARLVGSRDPNDSSFVHGDLGEFGY 470
+H Y+H + I+ + ++ DFGL + DP S V EF
Sbjct: 271 MHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFA- 323
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDW-VNHLVIAG 528
APE + D++ G++ LLSG P +E + DW ++ +G
Sbjct: 324 -APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 382
Query: 529 RSRDVVD 535
S D D
Sbjct: 383 ISEDGKD 389
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 20 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 134 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 180
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEK--QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL 366
G YKA + S LA ++ K E+ + E++ L HPN+V LL E
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 83
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
+ L G VD + + T +I + + L L++ +H+ +
Sbjct: 84 I---------LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 427 SSNVILIDDDFDARITDFGL-ARLVGSRDPNDSSFVHGDLGEFGYVAPEY-----SSTMV 480
+ IL D D ++ DFG+ A+ + SF+ G ++APE S
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI----GTPYWMAPEVVMCETSKDRP 190
Query: 481 ASLKGDVYGFGIVLLELLSGQKP 503
K DV+ GI L+E+ + P
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPP 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 26/189 (13%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
K F+ E+ Q RH N+V +G C+ ++ TLYS++ + VL
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI------VL 127
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG--- 451
D + +I +G+ +LH +H+ + S + D+ ITDFGL + G
Sbjct: 128 DVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQ 183
Query: 452 -SRDPNDSSFVHGDLGEFGYVAPEY---------SSTMVASLKGDVYGFGIVLLELLSGQ 501
R + +G L ++APE + S DV+ G + EL + +
Sbjct: 184 AGRREDKLRIQNGWL---CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240
Query: 502 KPLDVAGAE 510
P AE
Sbjct: 241 WPFKTQPAE 249
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 24/213 (11%)
Query: 297 FAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPNLVP 354
FAV TG+ Y A + +R + + +S + E++ L +++HPN++
Sbjct: 24 FAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 355 LLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLH 414
L + + +L+ + + G L+ L T ++ ++ G+ L H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 415 HGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
+P N++L+D + +I DFGLA + + + F G +V
Sbjct: 138 FDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTPEFV 184
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + L+ D++ G++ LLSG P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 27/208 (12%)
Query: 316 LPDASALAIKRLSACKLS---EKQFRSEMNRLGQLRHPNLVPLLGFCVVE----EERLLV 368
L D A+KR+ + E Q ++M+RL HPN++ L+ +C+ E E L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRL--FNHPNILRLVAYCLRERGAKHEAWLL 108
Query: 369 YKHMPNGTLYSLLHGNGVD--NTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
GTL+ N ++ L L + +G RGL +H Y H+ +
Sbjct: 109 LPFFKRGTLW-----NEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDL 160
Query: 427 SSNVILIDDDFDARITDFG-----LARLVGSRDPNDSSFVHGDLGEFGYVAPEY---SST 478
IL+ D+ + D G + GSR Y APE S
Sbjct: 161 KPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH 220
Query: 479 MVASLKGDVYGFGIVLLELLSGQKPLDV 506
V + DV+ G VL ++ G+ P D+
Sbjct: 221 CVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 30/202 (14%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSE---KQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
GV YKA A+K++ K E E++ L +L+H N+V L ++
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+LV++H+ + L LL + G L+ T + G+A+ H +H+
Sbjct: 76 VLVFEHL-DQDLKKLL------DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-------YSST 478
+ +LI+ + + +I DFGLAR G + H ++ Y AP+ YS+T
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGI---PVRKYTH-EVVTLWYRAPDVLMGSKKYSTT 181
Query: 479 MVASLKGDVYGFGIVLLELLSG 500
+ D++ G + E+++G
Sbjct: 182 I------DIWSVGCIFAEMVNG 197
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 30/202 (14%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSE---KQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
GV YKA A+K++ K E E++ L +L+H N+V L ++
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQY 425
+LV++H+ + L LL + G L+ T + G+A+ H +H+
Sbjct: 76 VLVFEHL-DQDLKKLL------DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 426 ISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-------YSST 478
+ +LI+ + + +I DFGLAR G + H ++ Y AP+ YS+T
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGI---PVRKYTH-EVVTLWYRAPDVLMGSKKYSTT 181
Query: 479 MVASLKGDVYGFGIVLLELLSG 500
+ D++ G + E+++G
Sbjct: 182 I------DIWSVGCIFAEMVNG 197
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 49/292 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 45 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
C +H+ +++ IL+ + +I DFGLAR + +DP+ L ++A
Sbjct: 165 ASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARL-PLKWMA 218
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSR 531
PE V +++ DV+ FG++L E+ S G P +E F L + R+
Sbjct: 219 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAP 273
Query: 532 DVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
D +Y + C P RP+ ++ E L ++ + +
Sbjct: 274 DYTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 23/223 (10%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K L +L E Q R E+ LRHPN++ + + + L+ + P G L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 378 YSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
Y L +G D S LH+ + +H+ I +L+
Sbjct: 102 YKELQKHGRFDEQRSATF-----------MEELADALHYCHERKVIHRDIKPENLLMGYK 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+ +I DFG + S G Y+ PE K D++ G++ E
Sbjct: 151 GELKIADFGWSVHAPSLRRRXMC------GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 497 LLSGQKPLDVAGAEEGFKGNL-VDWVNHLVIAGRSRDVVDKSL 538
L G P D E + + VD ++ S+D++ K L
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLL 247
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 23/223 (10%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K L +L E Q R E+ LRHPN++ + + + L+ + P G L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 378 YSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
Y L +G D S LH+ + +H+ I +L+
Sbjct: 102 YKELQKHGRFDEQRSATF-----------MEELADALHYCHERKVIHRDIKPENLLMGYK 150
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+ +I DFG + S G Y+ PE K D++ G++ E
Sbjct: 151 GELKIADFGWSVHAPSLRRRXMC------GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 497 LLSGQKPLDVAGAEEGFKGNL-VDWVNHLVIAGRSRDVVDKSL 538
L G P D E + + VD ++ S+D++ K L
Sbjct: 205 FLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLL 247
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L +K+F++ E+ + +L H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 210
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 211 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 266 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 299
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 36/208 (17%)
Query: 308 TGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER 365
TG Y A + +RL + + +S ++ E+N L ++RHPN++ L + +
Sbjct: 50 TGKEYAAKF-----IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 104
Query: 366 LLVYKHMPNGTLYSL------LHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQP 419
+L+ + + G L+ L + L +LD L S+ +A H +P
Sbjct: 105 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH-----SKRIA--HFDLKP 157
Query: 420 PYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS 476
N++L+D + ++ DFG+A + + + + F G +VAPE
Sbjct: 158 --------ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-----GTPEFVAPEIV 204
Query: 477 STMVASLKGDVYGFGIVLLELLSGQKPL 504
+ L+ D++ G++ LLSG P
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 84/223 (37%), Gaps = 23/223 (10%)
Query: 322 LAIKRLSACKLS----EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K L +L E Q R E+ LRHPN++ + + + L+ + P G L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 378 YSLLHGNG-VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
Y L +G D S LH+ + +H+ I +L+
Sbjct: 103 YKELQKHGRFDEQRSATF-----------MEELADALHYCHERKVIHRDIKPENLLMGYK 151
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLE 496
+ +I DFG + S G Y+ PE K D++ G++ E
Sbjct: 152 GELKIADFGWSVHAPSLRRRXMC------GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
Query: 497 LLSGQKPLDVAGAEEGFKGNL-VDWVNHLVIAGRSRDVVDKSL 538
L G P D E + + VD ++ S+D++ K L
Sbjct: 206 FLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLL 248
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 34/180 (18%)
Query: 25 DVKCLEGIQNSIKDPDGRLSWSFTNTTVGAICRLT--GVACWNEKEN-RIISLTLSSMQL 81
D + L I+ + +P SW T C T GV C + + R+ +L LS + L
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTD----CCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 82 SGQLPESLHLCHXXXXXXXXXXXXXXXIPVDLCKWLPYVVQLDLSN-NHLSGPIPPQIVE 140
P IP L LPY+ L + N+L GPIPP I +
Sbjct: 63 PKPYP----------------------IPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAK 99
Query: 141 CXXXXXXXXXXXXXXXXIPFEVSRLDRLKEFSVAGNDLSGTIPPDLARFPEE---SFDGN 197
IP +S++ L + N LSGT+PP ++ P +FDGN
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 24/206 (11%)
Query: 308 TGVSYKAVLPDASA----LAIKRL--SACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVV 361
TG + VL + A A+K + A K E +E+ L +++H N+V L
Sbjct: 32 TGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYES 91
Query: 362 EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGAS---RGLAWLHHGCQ 418
LV + + G L+ + V+ D ST +R + A + +H +
Sbjct: 92 PNHLYLVMQLVSGGELFDRI----VEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLK 147
Query: 419 PPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST 478
P + Y D++ I+DFGL+++ G D ++ G GYVAPE +
Sbjct: 148 PENLLYYSQ------DEESKIMISDFGLSKMEGKGDVMSTA-----CGTPGYVAPEVLAQ 196
Query: 479 MVASLKGDVYGFGIVLLELLSGQKPL 504
S D + G++ LL G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 27/247 (10%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T +F V + + TG ++ A ++ + ++ R E+ + LRHP L
Sbjct: 60 GTGAFGVVHRVTERATGNNFAAKF---------VMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 353 VPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
V L + E +++Y+ M G L+ + + +++ ++ +GL
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV------CKGLCH 164
Query: 413 LHHGCQPPYMHQYISSNVILIDDDF--DARITDFGLARLVGSRDPNDSSFVHGDLGEFGY 470
+H Y+H + I+ + ++ DFGL + DP S V EF
Sbjct: 165 MHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFA- 217
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDW-VNHLVIAG 528
APE + D++ G++ LLSG P +E + DW ++ +G
Sbjct: 218 -APEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 276
Query: 529 RSRDVVD 535
S D D
Sbjct: 277 ISEDGKD 283
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 47/291 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 36 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 95
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 96 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 155
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
+H+ +++ IL+ + +I DFGLAR + +DP+ L ++AP
Sbjct: 156 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARL-PLKWMAP 210
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRD 532
E V +++ DV+ FG++L E+ S G P +E F L + R+ D
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPD 265
Query: 533 VVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+Y + C P RP+ ++ E L ++ + +
Sbjct: 266 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 24/217 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHP 350
+ FAV TG+ Y A + +R + + +S + E++ L +++HP
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 351 NLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGL 410
N++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSL 133
Query: 411 AWLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGE 467
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 134 QIAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GT 180
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 79/208 (37%), Gaps = 44/208 (21%)
Query: 322 LAIKRLSACKLSEKQFRSEMNR----LGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTL 377
+A+K S S+ FR+ R G+L+ P++VP+ F + +G L
Sbjct: 62 VALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEI------------DGQL 109
Query: 378 YSLLHGNGVDNTLSGVLDWSTRLRIG--MGASRGLAWLHH-------GCQPPYMHQYISS 428
Y VD L +D + LR + R +A + H+ +
Sbjct: 110 Y-------VDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP 162
Query: 429 NVILIDDDFDARITDFGLARLVGSRDPNDSSFVH--GDLGEFGYVAPEYSSTMVASLKGD 486
IL+ D A + DFG+A D +G Y APE S A+ + D
Sbjct: 163 ENILVSADDFAYLVDFGIASAT-----TDEKLTQLGNTVGTLYYXAPERFSESHATYRAD 217
Query: 487 VYGFGIVLLELLSGQKP-----LDVAGA 509
+Y VL E L+G P L V GA
Sbjct: 218 IYALTCVLYECLTGSPPYQGDQLSVXGA 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ +++ IL+ + +I DFGLAR + +DP+ L ++APE V
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARL-PLKWMAPETIFDRVY 227
Query: 482 SLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG 540
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY- 281
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 282 -----------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 49/292 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 45 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
C +H+ +++ IL+ + +I DFGLAR + +DP+ L ++A
Sbjct: 165 ASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDXVRKGDARL-PLKWMA 218
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSR 531
PE V +++ DV+ FG++L E+ S G P +E F L + R+
Sbjct: 219 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAP 273
Query: 532 DVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
D +Y + C P RP+ ++ E L ++ + +
Sbjct: 274 DYTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 86/223 (38%), Gaps = 19/223 (8%)
Query: 334 EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGV 393
E Q R E+ L HPN++ L + L+ ++ P G LY L S
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK-------SCT 119
Query: 394 LDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSR 453
D I + L + H +H+ I +L+ + +I DFG + S
Sbjct: 120 FDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSL 176
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
G Y+ PE + + K D++ G++ ELL G P + A E +
Sbjct: 177 RRKTMC------GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETY 230
Query: 514 KGNL-VDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVAC 555
+ + VD + ++D++ K L R N E + +V+
Sbjct: 231 RRIVKVDLKFPASVPTGAQDLISKLL--RHNPSERLPLAQVSA 271
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 33/238 (13%)
Query: 284 KVKLADLLAATNSFAVENIIISTRTGVSYKAVLPDASALA-IKRLSACKLSEKQFRSEMN 342
++ L+ L F + ++ + G YK LA IK + E++ + E+N
Sbjct: 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN 72
Query: 343 RLGQL-RHPNLVPLLGFCV------VEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
L + H N+ G + ++++ LV + G++ L + NT L
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL-----IKNTKGNTLK 127
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFG----LARLVG 451
I RGL+ LH Q +H+ I +L+ ++ + ++ DFG L R VG
Sbjct: 128 EEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEY-----SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
R+ +F+ G ++APE + K D++ GI +E+ G PL
Sbjct: 185 RRN----TFI----GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 416 GCQPPYMHQYISSNV----ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
GCQ + ++ I ++ + +++D + +I DFGLA V G Y+
Sbjct: 127 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC----GTPNYI 182
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
APE S S + DV+ G ++ LL G+ P + + +E +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 309 GVSYKAV-LPDASALAIK---RLSACKLSEKQFRS---EMNRLGQLRHPNLVPLLGFCVV 361
G +K V +P+ ++ I ++ K + F++ M +G L H ++V LLG C
Sbjct: 45 GTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 104
Query: 362 EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLH-HGCQPP 420
+L V +++P G+L + + G L L G+ ++G+ +L HG
Sbjct: 105 SSLQL-VTQYLPLGSLLDHVRQH------RGALGPQLLLNWGVQIAKGMYYLEEHGM--- 154
Query: 421 YMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE-FGYVAPEYSSTM 479
+H+ +++ +L+ ++ DFG+A L+ P+D ++ + ++A E
Sbjct: 155 -VHRNLAARNVLLKSPSQVQVADFGVADLL---PPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 480 VASLKGDVYGFGIVLLELLS-GQKP 503
+ + DV+ +G+ + EL++ G +P
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 34/205 (16%)
Query: 317 PDASALAIKR--LSACKLSEKQF-RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
P + ++R L AC F + E++ HPN+VP + + E +V M
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
G+ L+ + +D + + I G + L ++HH Y+H+ + ++ ILI
Sbjct: 110 YGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHMG---YVHRSVKASHILI 161
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL---------- 483
D G L G R N S HG + P+YS ++ L
Sbjct: 162 SVD--------GKVYLSGLRS-NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ 212
Query: 484 ----KGDVYGFGIVLLELLSGQKPL 504
K D+Y GI EL +G P
Sbjct: 213 GYDAKSDIYSVGITACELANGHVPF 237
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 47/291 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 36 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 95
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 96 GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 155
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
+H+ +++ IL+ + +I DFGLAR + +DP+ L ++AP
Sbjct: 156 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-PLKWMAP 210
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRD 532
E V +++ DV+ FG++L E+ S G P +E F L + R+ D
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPD 265
Query: 533 VVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+Y + C P RP+ ++ E L ++ + +
Sbjct: 266 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 34/205 (16%)
Query: 317 PDASALAIKR--LSACKLSEKQF-RSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
P + ++R L AC F + E++ HPN+VP + + E +V M
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
G+ L+ + +D + + I G + L ++HH Y+H+ + ++ ILI
Sbjct: 94 YGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHMG---YVHRSVKASHILI 145
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL---------- 483
D G L G R N S HG + P+YS ++ L
Sbjct: 146 SVD--------GKVYLSGLRS-NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ 196
Query: 484 ----KGDVYGFGIVLLELLSGQKPL 504
K D+Y GI EL +G P
Sbjct: 197 GYDAKSDIYSVGITACELANGHVPF 221
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ +++ IL+ + +I DFGLAR + +DP+ L ++APE V
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARL-PLKWMAPETIFDRVY 227
Query: 482 SLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYG 540
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 228 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY- 281
Query: 541 RGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 282 -----------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACK--LSEKQFRSEMNRLGQLRHPN 351
+ FAV TG+ Y A + +R + + +S + E++ L +++HPN
Sbjct: 21 SGQFAVVKKCREKSTGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L + + +L+ + + G L+ L T ++ ++ G+ L
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + +I DFGLA + + + F G
Sbjct: 135 IAHFDLKP--------ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTP 181
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 111/291 (38%), Gaps = 47/291 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 36 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 95
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 96 GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 155
Query: 414 HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAP 473
+H+ +++ IL+ + +I DFGLAR + +DP+ L ++AP
Sbjct: 156 ---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-PLKWMAP 210
Query: 474 EYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRD 532
E V +++ DV+ FG++L E+ S G P +E F L + R+ D
Sbjct: 211 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPD 265
Query: 533 VVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+Y + C P RP+ ++ E L ++ + +
Sbjct: 266 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 416 GCQPPYMHQYISSNV----ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
GCQ + ++ I ++ + +++D + +I DFGLA V D G Y+
Sbjct: 151 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY----DGERKKVLCGTPNYI 206
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
APE S S + DV+ G ++ LL G+ P + + +E +
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 248
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 51/293 (17%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 47 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 106
Query: 364 ERLLVYKHMPN-GTLYSLL---------HGNGVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L + ++ L + ++G+ +L
Sbjct: 107 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 166
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYV 471
C +H+ +++ IL+ + +I DFGLAR + +DP+ GD ++
Sbjct: 167 ASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWM 219
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRS 530
APE V +++ DV+ FG++L E+ S G P +E F L + R+
Sbjct: 220 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RA 274
Query: 531 RDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
D +Y + C P RP+ ++ E L ++ + +
Sbjct: 275 PDYTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 315
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 341 MNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRL 400
M +G L H ++V LLG C +L V +++P G+L + + G L L
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQH------RGALGPQLLL 118
Query: 401 RIGMGASRGLAWLH-HGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSS 459
G+ ++G+ +L HG +H+ +++ +L+ ++ DFG+A L+ P+D
Sbjct: 119 NWGVQIAKGMYYLEEHGM----VHRNLAARNVLLKSPSQVQVADFGVADLL---PPDDKQ 171
Query: 460 FVHGDLGE-FGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKP 503
++ + ++A E + + DV+ +G+ + EL++ G +P
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYVAPEYSSTMV 480
+H+ +++ IL+ + +I DFGLAR + +DP+ GD ++APE V
Sbjct: 166 IHRDLAARNILLSEKNVVKIXDFGLARDI-YKDPD--YVRKGDARLPLKWMAPETIFDRV 222
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY 539
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRM-----RAPDYTTPEMY 277
Query: 540 GRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 278 ------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 29/212 (13%)
Query: 322 LAIKRLSACKLSEKQFRS--EMNRLGQLRHPNLV---PLLGFCVVEEER-LLVYKHMPNG 375
+AIK++S + R+ E+ L + RH N++ ++ +E+ + + + H+
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA 130
Query: 376 TLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
LY LL + N + RGL ++H +H+ + + +L++
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQI--------LRGLKYIHSAN---VLHRDLKPSNLLLNT 179
Query: 436 DFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG-DVYGFGIVL 494
D +I DFGLAR V D + + F+ + Y APE K D++ G +L
Sbjct: 180 TXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
Query: 495 LELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
E+LS +P+ F G + +D +NH++
Sbjct: 239 AEMLSN-RPI--------FPGKHYLDQLNHIL 261
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 41/270 (15%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVE-------EERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + +RH N+ LGF + + L+ + NG+LY L
Sbjct: 77 FRETEIYQTVLMRHENI---LGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK------ 127
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHHGC-----QPPYMHQYISSNVILIDDDFDARITD 443
S LD + L++ + GL LH +P H+ + S IL+ + I D
Sbjct: 128 --STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185
Query: 444 FGLARLVGSRDPNDSSF-VHGDLGEFGYVAPEY------SSTMVASLKGDVYGFGIVLLE 496
GLA S D N+ + +G Y+ PE + + + D+Y FG++L E
Sbjct: 186 LGLAVKFIS-DTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVV-----DKSLYGRGNDDEIM-QF 550
+ + G E ++ D V R++V S R + DE + Q
Sbjct: 245 V---ARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQM 301
Query: 551 LRVACSCVVSRPKDRPSMYQVYESLKSMAE 580
++ C P R + +V ++L M+E
Sbjct: 302 GKLMTECWAHNPASRLTALRVKKTLAKMSE 331
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+GL +LH + +H+ I + +L+ + D ++ DFG+A + ++FV G
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV----GT 183
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
++APE K D++ GI +EL G+ P
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 416 GCQPPYMHQYISSNV----ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
GCQ + ++ I ++ + +++D + +I DFGLA V D G Y+
Sbjct: 153 GCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY----DGERKKVLCGTPNYI 208
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
APE S S + DV+ G ++ LL G+ P + + +E +
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 250
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ ++E+ L LRH ++ L + +V ++ P G L+ + + LS +
Sbjct: 54 RIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ---DRLS---E 107
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGL-ARLVGSRD 454
TR+ S +A++H Y H+ + +L D+ ++ DFGL A+ G++D
Sbjct: 108 EETRVVFRQIVS-AVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163
Query: 455 PNDSSFVHGDLGEFGYVAPEY--SSTMVASLKGDVYGFGIVLLELLSGQKPLD 505
+ + G Y APE + + S + DV+ GI+L L+ G P D
Sbjct: 164 YHLQTCC----GSLAYAAPELIQGKSYLGS-EADVWSMGILLYVLMCGFLPFD 211
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 51/293 (17%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 45 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYV 471
C +H+ +++ IL+ + +I DFGLAR + +DP+ GD ++
Sbjct: 165 ASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWM 217
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRS 530
APE V +++ DV+ FG++L E+ S G P +E F L + R+
Sbjct: 218 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RA 272
Query: 531 RDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
D +Y + C P RP+ ++ E L ++ + +
Sbjct: 273 PDYTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 40/174 (22%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E++ L +L HPN+V LL E + LV++H VD L +D S
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEH--------------VDQDLKKFMDASAL 100
Query: 400 LRIGMGASR--------GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVG 451
I + + GLA+ H +H+ + +LI+ + ++ DFGLAR G
Sbjct: 101 TGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG 157
Query: 452 SRDPNDSSFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 V---PVRTYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 331 KLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSL-LHGNGVDNT 389
K+ +K E+ L QLRH NLV LL C ++ LV++ + + L L L NG
Sbjct: 65 KMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---- 120
Query: 390 LSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARL 449
LD+ + G+ + H +H+ I IL+ ++ DFG AR
Sbjct: 121 ----LDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFART 173
Query: 450 VGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQ 501
+ + ++ Y APE V K DV+ G ++ E+ G+
Sbjct: 174 LAA----PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 336 QFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVL 394
Q E+ L + P +V G + E + +HM G+L +L G + + G
Sbjct: 53 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-- 110
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSR 453
++ + +GL +L + MH+ + + IL++ + ++ DFG++ +L+
Sbjct: 111 ------KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 159
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
D + FV G Y++PE S++ D++ G+ L+E+ G+ P
Sbjct: 160 DEMANEFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 112/292 (38%), Gaps = 49/292 (16%)
Query: 318 DASALAIKRLSACKL----------SEKQFRSEMNRLGQL----RHPNLVPLLGFCVVEE 363
+A A I + + C+ + + R+ M+ L L H N+V LLG C
Sbjct: 82 EADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141
Query: 364 ERLLVYKHMPN-GTLYSLLHGN---------GVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L+V G L + L ++ L + ++G+ +L
Sbjct: 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 201
Query: 414 -HHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
C +H+ +++ IL+ + +I DFGLAR + +DP+ L ++A
Sbjct: 202 ASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARL-PLKWMA 255
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSR 531
PE V +++ DV+ FG++L E+ S G P +E F L + R+
Sbjct: 256 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAP 310
Query: 532 DVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
D +Y + C P RP+ ++ E L ++ + +
Sbjct: 311 DYTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L K F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L K F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E++ + +L+H N+V L E + LV++ M N L + V NT G L+ +
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTVGNTPRG-LELNLV 110
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSS 459
+GLA+ H +H+ + +LI+ ++ DFGLAR G SS
Sbjct: 111 KYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167
Query: 460 FVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFK 514
++ Y AP+ S T S+ D++ G +L E+++G+ EE K
Sbjct: 168 ----EVVTLWYRAPDVLMGSRTYSTSI--DIWSCGCILAEMITGKPLFPGTNDEEQLK 219
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA-SLKGDVYG 489
IL+D+ RI+D GLA + P H +G GY+APE VA D +
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKP------HASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 490 FGIVLLELLSGQKPL 504
G +L +LL G P
Sbjct: 377 LGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA-SLKGDVYG 489
IL+D+ RI+D GLA + P H +G GY+APE VA D +
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKP------HASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 490 FGIVLLELLSGQKPL 504
G +L +LL G P
Sbjct: 377 LGCMLFKLLRGHSPF 391
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 42/257 (16%)
Query: 318 DASALAIKRLS-ACKLSEKQFR---SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
++ +AIK++S + K S ++++ E+ L +LRHPN + G + E LV +
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME--- 134
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
Y L + + L + GA +GLA+LH +H+ + + IL+
Sbjct: 135 ----YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKAGNILL 187
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL---KGDVYGF 490
+ ++ DFG A ++ + FV G ++APE M K DV+
Sbjct: 188 SEPGLVKLGDFGSASIMAPAN----XFV----GTPYWMAPEVILAMDEGQYDGKVDVWSL 239
Query: 491 GIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQF 550
GI +EL + PL F N + + H IA + + F
Sbjct: 240 GITCIELAERKPPL--------FNMNAMSALYH--IAQNESPALQSGHWSE-------YF 282
Query: 551 LRVACSCVVSRPKDRPS 567
SC+ P+DRP+
Sbjct: 283 RNFVDSCLQKIPQDRPT 299
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYVAPEYSSTMV 480
+H+ +++ IL+ + +I DFGLAR + +DP+ GD ++APE V
Sbjct: 166 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWMAPETIFDRV 222
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY 539
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY 277
Query: 540 GRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 278 ------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA-SLKGDVYG 489
IL+D+ RI+D GLA + P H +G GY+APE VA D +
Sbjct: 322 ILLDEHGHVRISDLGLACDFSKKKP------HASVGTHGYMAPEVLQKGVAYDSSADWFS 375
Query: 490 FGIVLLELLSGQKPL 504
G +L +LL G P
Sbjct: 376 LGCMLFKLLRGHSPF 390
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA-SLKGDVYG 489
IL+D+ RI+D GLA + P H +G GY+APE VA D +
Sbjct: 323 ILLDEHGHVRISDLGLACDFSKKKP------HASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 490 FGIVLLELLSGQKPL 504
G +L +LL G P
Sbjct: 377 LGCMLFKLLRGHSPF 391
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASAL-AIKRLSACKLSEKQFRS-EMNRLGQLRHPNLV 353
S+ +I + GV Y+A L D+ L AIK++ L K F++ E+ + +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIV 76
Query: 354 PLLGFCVVEEERL------LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGM-GA 406
L F E+ LV ++P H + TL + +++ M
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-----VKLYMYQL 131
Query: 407 SRGLAWLHHG--CQPPYMHQYISSNVILIDDDFDA-RITDFGLARLVGSRDPNDSSFV-- 461
R LA++H C H+ I +L+D D ++ DFG A+ + +PN S
Sbjct: 132 FRSLAYIHSFGIC-----HRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 462 HGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQ 501
+ E + A +Y+S++ DV+ G VL ELL GQ
Sbjct: 187 YYRAPELIFGATDYTSSI------DVWSAGCVLAELLLGQ 220
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 423 HQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVA 481
H+ I +L+D+ + +I+DFGLA + R N ++ G YVAPE
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVF--RYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 482 SLKGDVYGFGIVLLELLSGQKPLD 505
+ DV+ GIVL +L+G+ P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 42/257 (16%)
Query: 318 DASALAIKRLS-ACKLSEKQFR---SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMP 373
++ +AIK++S + K S ++++ E+ L +LRHPN + G + E LV +
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME--- 95
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
Y L + + L + GA +GLA+LH +H+ + + IL+
Sbjct: 96 ----YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKAGNILL 148
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL---KGDVYGF 490
+ ++ DFG A ++ + FV G ++APE M K DV+
Sbjct: 149 SEPGLVKLGDFGSASIMAPAN----XFV----GTPYWMAPEVILAMDEGQYDGKVDVWSL 200
Query: 491 GIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQF 550
GI +EL + PL F N + + H IA + + F
Sbjct: 201 GITCIELAERKPPL--------FNMNAMSALYH--IAQNESPALQSGHWSE-------YF 243
Query: 551 LRVACSCVVSRPKDRPS 567
SC+ P+DRP+
Sbjct: 244 RNFVDSCLQKIPQDRPT 260
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 320 SALAIKRLSACKLSEKQFRS--EMNRLGQLRHPNLV---PLLGFCVVEEER-LLVYKHMP 373
+ +AIK++S + R+ E+ L + RH N++ +L +E R + + + +
Sbjct: 69 TRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLM 128
Query: 374 NGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
LY LL + N + RGL ++H +H+ + + +LI
Sbjct: 129 ETDLYKLLKSQQLSNDHICYFLYQI--------LRGLKYIHSAN---VLHRDLKPSNLLI 177
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG-DVYGFGI 492
+ D +I DFGLAR + + + + F+ + Y APE K D++ G
Sbjct: 178 NTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGC 236
Query: 493 VLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
+L E+LS +P+ F G + +D +NH++
Sbjct: 237 ILAEMLSN-RPI--------FPGKHYLDQLNHIL 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ RL HPN+V L+ C E + LV++H+ + L + L D L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLP 118
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
T + RGL +LH C +H+ + IL+ ++ DFGLAR+ +
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 456 NDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKG 515
V Y APE + D++ G + E+ +KPL +E G
Sbjct: 176 LTPVVV-----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 229
Query: 516 NLVDWV 521
+ D +
Sbjct: 230 KIFDLI 235
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
GL +LH +++ + + IL+D D +I DFG+ + D + F G
Sbjct: 131 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----GTP 183
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVD 519
Y+APE + D + FG++L E+L GQ P EE F +D
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYVAPEYSSTMV 480
+H+ +++ IL+ + +I DFGLAR + +DP+ GD ++APE V
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWMAPETIFDRV 271
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY 539
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY 326
Query: 540 GRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 327 ------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 358
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYVAPEYSSTMV 480
+H+ +++ IL+ + +I DFGLAR + +DP+ GD ++APE V
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWMAPETIFDRV 278
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY 539
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY 333
Query: 540 GRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 334 ------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 365
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYVAPEYSSTMV 480
+H+ +++ IL+ + +I DFGLAR + +DP+ GD ++APE V
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWMAPETIFDRV 276
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY 539
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY 331
Query: 540 GRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 332 ------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 363
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG-EFGYVAPEYSSTMV 480
+H+ +++ IL+ + +I DFGLAR + +DP+ GD ++APE V
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPD--YVRKGDARLPLKWMAPETIFDRV 269
Query: 481 ASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLY 539
+++ DV+ FG++L E+ S G P +E F L + R+ D +Y
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----RAPDYTTPEMY 324
Query: 540 GRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKSMAEKHG 583
+ C P RP+ ++ E L ++ + +
Sbjct: 325 ------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVAT 194
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXVAT 195
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 246
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 29/212 (13%)
Query: 322 LAIKRLSACKLSEKQFRS--EMNRLGQLRHPNLV---PLLGFCVVEEER-LLVYKHMPNG 375
+AIK++S + R+ E+ L + RH N++ ++ +E+ + + + + +
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 376 TLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
LY LL + N + RGL ++H +H+ + + +L++
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQI--------LRGLKYIHSAN---VLHRDLKPSNLLLNT 163
Query: 436 DFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG-DVYGFGIVL 494
D +I DFGLAR V D + + F+ + Y APE K D++ G +L
Sbjct: 164 TXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
Query: 495 LELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
E+LS +P+ F G + +D +NH++
Sbjct: 223 AEMLSN-RPI--------FPGKHYLDQLNHIL 245
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 85/198 (42%), Gaps = 29/198 (14%)
Query: 321 ALAIKRLSACKLSEKQF-------RSEMNRLGQLR-HPNLVPLLGFCVVEEERLLVYKHM 372
A+ I ++A +LS +Q R E + L Q+ HP+++ L+ LV+ M
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVIL 432
G L+ L T L I +++LH +H+ + IL
Sbjct: 183 RKGELFDYL-------TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENIL 232
Query: 433 IDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-YSSTMVASLKG-----D 486
+DD+ R++DFG + + +P + + G GY+APE +M + G D
Sbjct: 233 LDDNMQIRLSDFGFSCHL---EPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVD 287
Query: 487 VYGFGIVLLELLSGQKPL 504
++ G++L LL+G P
Sbjct: 288 LWACGVILFTLLAGSPPF 305
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
GL +LH +++ + + IL+D D +I DFG+ + D + F G
Sbjct: 130 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC----GTP 182
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVD 519
Y+APE + D + FG++L E+L GQ P EE F +D
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ RL HPN+V L+ C E + LV++H+ + L + L D L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLP 110
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
T + RGL +LH C +H+ + IL+ ++ DFGLAR+ +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 456 NDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKG 515
V Y APE + D++ G + E+ +KPL +E G
Sbjct: 168 LAPVVV-----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 221
Query: 516 NLVDWV 521
+ D +
Sbjct: 222 KIFDLI 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 321 ALAIKRLSACKLSEKQFR-SEMNRLGQLRHPNLVPLLGFCVVE-------EERLLVYKHM 372
++A+K S+ + + FR +E+ LRH N+ LGF + + L+ +
Sbjct: 33 SVAVKIFSS-RDEQSWFRETEIYNTVLLRHDNI---LGFIASDMTSRNSSTQLWLITHYH 88
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLH---HGCQ--PPYMHQYIS 427
+G+LY L ++ L+ LR+ + A+ GLA LH G Q P H+
Sbjct: 89 EHGSLYDFLQRQTLEPHLA--------LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFK 140
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV-----AS 482
S +L+ + I D GLA + + +G Y+APE + S
Sbjct: 141 SRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFES 200
Query: 483 LK-GDVYGFGIVLLEL 497
K D++ FG+VL E+
Sbjct: 201 YKWTDIWAFGLVLWEI 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 27/172 (15%)
Query: 407 SRGLAWLH-HGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDL 465
+RG+ +L C +H+ +++ IL+ ++ +I DFGLAR + N GD
Sbjct: 209 ARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYK---NPDYVRKGDT 261
Query: 466 G-EFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNH 523
++APE + S K DV+ +G++L E+ S G P +E F L +
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLRE---- 317
Query: 524 LVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESL 575
+ R + + ++ C PK+RP ++ E L
Sbjct: 318 -------------GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 322 LAIKRLSACKLSEKQ--FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK ++ L K+ +E+ L +++HPN+V L L+ + + G L+
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 380 LLHGNG------VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
+ G + VLD L L +H +P + Y +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH-------DLGIVHRDLKPENLLYYS------L 152
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D+D I+DFGL+++ DP S + G GYVAPE + S D + G++
Sbjct: 153 DEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 494 LLELLSGQKPL 504
LL G P
Sbjct: 208 AYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 322 LAIKRLSACKLSEKQ--FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK ++ L K+ +E+ L +++HPN+V L L+ + + G L+
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 380 LLHGNG------VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
+ G + VLD L L +H +P + Y +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH-------DLGIVHRDLKPENLLYYS------L 152
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D+D I+DFGL+++ DP S + G GYVAPE + S D + G++
Sbjct: 153 DEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 494 LLELLSGQKPL 504
LL G P
Sbjct: 208 AYILLCGYPPF 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 322 LAIKRLSACKLSEKQ--FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK ++ L K+ +E+ L +++HPN+V L L+ + + G L+
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 380 LLHGNG------VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
+ G + VLD L L +H +P + Y +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH-------DLGIVHRDLKPENLLYYS------L 152
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D+D I+DFGL+++ DP S + G GYVAPE + S D + G++
Sbjct: 153 DEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 494 LLELLSGQKPL 504
LL G P
Sbjct: 208 AYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 322 LAIKRLSACKLSEKQ--FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS 379
+AIK ++ L K+ +E+ L +++HPN+V L L+ + + G L+
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 380 LLHGNG------VDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
+ G + VLD L L +H +P + Y +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH-------DLGIVHRDLKPENLLYYS------L 152
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIV 493
D+D I+DFGL+++ DP S + G GYVAPE + S D + G++
Sbjct: 153 DEDSKIMISDFGLSKM---EDPG--SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 494 LLELLSGQKPL 504
LL G P
Sbjct: 208 AYILLCGYPPF 218
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 20/214 (9%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
+ FA+ TG+ Y A R C+ ++ E++ L Q+ HPN++
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCR---EEIEREVSILRQVLHPNII 78
Query: 354 PLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L + +L+ + + G L+ L + + ++ G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 414 HHGCQPPYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGY 470
H +P N++L+D + ++ DFGLA + D G +
Sbjct: 138 HFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEF 184
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
VAPE + L+ D++ G++ LLSG P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVEE-------ERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + LRH N+ LGF + + LV + +G+L+ L N
Sbjct: 82 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 136
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH---GCQ--PPYMHQYISSNVILIDDDFDARITD 443
T+ G++ ++ + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 137 TVEGMI------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190
Query: 444 FGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA R + D D + H +G Y+APE + + + D+Y G+V E
Sbjct: 191 LGLAVRHDSATDTIDIAPNH-RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACS 556
+ + + G E ++ D V +D + + +V C
Sbjct: 250 I---ARRCSIGGIHEDYQLPYYDLVP--------------------SDPSVEEMRKVVCE 286
Query: 557 CVVSRPKDRPSMYQVYESLKSMAE 580
+ RP + P+ +Q E+L+ MA+
Sbjct: 287 QKL-RP-NIPNRWQSCEALRVMAK 308
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 241
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 241
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVEE-------ERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + LRH N+ LGF + + LV + +G+L+ L N
Sbjct: 44 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 98
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH---GCQ--PPYMHQYISSNVILIDDDFDARITD 443
T+ G++ ++ + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 99 TVEGMI------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 152
Query: 444 FGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA R + D D + H +G Y+APE + + + D+Y G+V E
Sbjct: 153 LGLAVRHDSATDTIDIAPNH-RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 211
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACS 556
+ + + G E ++ D V +D + + +V C
Sbjct: 212 I---ARRCSIGGIHEDYQLPYYDLV--------------------PSDPSVEEMRKVVCE 248
Query: 557 CVVSRPKDRPSMYQVYESLKSMAE 580
+ RP + P+ +Q E+L+ MA+
Sbjct: 249 QKL-RP-NIPNRWQSCEALRVMAK 270
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVAT 194
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 241
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVEE-------ERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + LRH N+ LGF + + LV + +G+L+ L N
Sbjct: 69 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 123
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH---GCQ--PPYMHQYISSNVILIDDDFDARITD 443
T+ G++ ++ + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 124 TVEGMI------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 177
Query: 444 FGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA R + D D + H +G Y+APE + + + D+Y G+V E
Sbjct: 178 LGLAVRHDSATDTIDIAPNH-RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACS 556
+ + + G E ++ D V +D + + +V C
Sbjct: 237 I---ARRCSIGGIHEDYQLPYYDLVP--------------------SDPSVEEMRKVVCE 273
Query: 557 CVVSRPKDRPSMYQVYESLKSMAE 580
+ RP + P+ +Q E+L+ MA+
Sbjct: 274 QKL-RP-NIPNRWQSCEALRVMAK 295
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVEE-------ERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + LRH N+ LGF + + LV + +G+L+ L N
Sbjct: 49 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 103
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH---GCQ--PPYMHQYISSNVILIDDDFDARITD 443
T+ G++ ++ + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 104 TVEGMI------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 157
Query: 444 FGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA R + D D + H +G Y+APE + + + D+Y G+V E
Sbjct: 158 LGLAVRHDSATDTIDIAPNH-RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 216
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACS 556
+ + + G E ++ D V +D + + +V C
Sbjct: 217 I---ARRCSIGGIHEDYQLPYYDLVP--------------------SDPSVEEMRKVVCE 253
Query: 557 CVVSRPKDRPSMYQVYESLKSMAE 580
+ RP + P+ +Q E+L+ MA+
Sbjct: 254 QKL-RP-NIPNRWQSCEALRVMAK 275
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++H+ + L + + + + L + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 157
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 20/186 (10%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ RL HPN+V L+ C E + LV++H+ + L + L D L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLP 110
Query: 396 WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDP 455
T + RGL +LH C +H+ + IL+ ++ DFGLAR+ +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 456 NDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKG 515
V Y APE + D++ G + E+ +KPL +E G
Sbjct: 168 LFPVVV-----TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLG 221
Query: 516 NLVDWV 521
+ D +
Sbjct: 222 KIFDLI 227
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 32/181 (17%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVE-------EERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ LRH N+ LGF + + L+ + G+LY L +D
Sbjct: 48 FRETELYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT 104
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLH---HGCQ--PPYMHQYISSNVILIDDDFDARITD 443
+ LRI + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 105 V--------SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156
Query: 444 FGLARLVGSRDPNDSSFVHG-DLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA ++ S+ N + +G Y+APE + + + D++ FG+VL E
Sbjct: 157 LGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 497 L 497
+
Sbjct: 216 V 216
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 241
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVEE-------ERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + LRH N+ LGF + + LV + +G+L+ L N
Sbjct: 43 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 97
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH---GCQ--PPYMHQYISSNVILIDDDFDARITD 443
T+ G++ ++ + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 98 TVEGMI------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151
Query: 444 FGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA R + D D + H +G Y+APE + + + D+Y G+V E
Sbjct: 152 LGLAVRHDSATDTIDIAPNH-RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACS 556
+ + + G E ++ D V +D + + +V C
Sbjct: 211 I---ARRCSIGGIHEDYQLPYYDLV--------------------PSDPSVEEMRKVVCE 247
Query: 557 CVVSRPKDRPSMYQVYESLKSMAE 580
+ RP + P+ +Q E+L+ MA+
Sbjct: 248 QKL-RP-NIPNRWQSCEALRVMAK 269
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 194
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 194
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 192
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 195
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 246
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 196
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 187
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 194
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 192
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 243
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 188
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 34/209 (16%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEK--QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL 366
G YKA + ALA ++ K E+ + E+ L HP +V LLG
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG--------- 75
Query: 367 LVYKHMPNGTLYSLLH---GNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMH 423
Y H +G L+ ++ G VD + + T +I + + L L+ +H
Sbjct: 76 -AYYH--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 424 QYISSNVILIDDDFDARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE--YSS 477
+ + + +L+ + D R+ DFG++ + + RD SF+ G ++APE
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFI----GTPYWMAPEVVMCE 184
Query: 478 TMVAS---LKGDVYGFGIVLLELLSGQKP 503
TM + K D++ GI L+E+ + P
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 188
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 34/209 (16%)
Query: 309 GVSYKAVLPDASALAIKRLSACKLSEK--QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL 366
G YKA + ALA ++ K E+ + E+ L HP +V LLG
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG--------- 83
Query: 367 LVYKHMPNGTLYSLLH---GNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMH 423
Y H +G L+ ++ G VD + + T +I + + L L+ +H
Sbjct: 84 -AYYH--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 424 QYISSNVILIDDDFDARITDFGLA----RLVGSRDPNDSSFVHGDLGEFGYVAPE--YSS 477
+ + + +L+ + D R+ DFG++ + + RD SF+ G ++APE
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD----SFI----GTPYWMAPEVVMCE 192
Query: 478 TMVAS---LKGDVYGFGIVLLELLSGQKP 503
TM + K D++ GI L+E+ + P
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 57/264 (21%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVEE-------ERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ + LRH N+ LGF + + LV + +G+L+ L N
Sbjct: 46 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 100
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHH---GCQ--PPYMHQYISSNVILIDDDFDARITD 443
T+ G++ ++ + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 101 TVEGMI------KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 154
Query: 444 FGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA R + D D + H +G Y+APE + + + D+Y G+V E
Sbjct: 155 LGLAVRHDSATDTIDIAPNH-RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 213
Query: 497 LLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQFLRVACS 556
+ + + G E ++ D V +D + + +V C
Sbjct: 214 I---ARRCSIGGIHEDYQLPYYDLVP--------------------SDPSVEEMRKVVCE 250
Query: 557 CVVSRPKDRPSMYQVYESLKSMAE 580
+ RP + P+ +Q E+L+ MA+
Sbjct: 251 QKL-RP-NIPNRWQSCEALRVMAK 272
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 32/181 (17%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVE-------EERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ LRH N+ LGF + + L+ + G+LY L +D
Sbjct: 48 FRETELYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT 104
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLH---HGCQ--PPYMHQYISSNVILIDDDFDARITD 443
+ LRI + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 105 V--------SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156
Query: 444 FGLARLVGSRDPNDSSFVHG-DLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA ++ S+ N + +G Y+APE + + + D++ FG+VL E
Sbjct: 157 LGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 215
Query: 497 L 497
+
Sbjct: 216 V 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 198
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 190
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 241
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVAT 210
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 261
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 17/161 (10%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E+ L +L HPN++ LL + LV+ M L ++ N + T S + +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM-- 118
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSS 459
+ +GL +LH Q +H+ + N +L+D++ ++ DFGLA+ GS PN +
Sbjct: 119 ----LMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS--PN-RA 168
Query: 460 FVHGDLGEFGYVAPE--YSSTMVASLKGDVYGFGIVLLELL 498
+ H + + Y APE + + M + D++ G +L ELL
Sbjct: 169 YXHQVVTRW-YRAPELLFGARMYG-VGVDMWAVGCILAELL 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 21/185 (11%)
Query: 324 IKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY-SLLH 382
I++ S S + E+ L L HPN++ L F + LV + G L+ ++H
Sbjct: 70 IRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH 129
Query: 383 GNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYIS-SNVILIDDDFDA-- 439
+ + V I G+ +LH + +H+ + N++L + DA
Sbjct: 130 RMKFNEVDAAV--------IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALI 178
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+I DFGL+ + ++ + LG Y+APE K DV+ G++L LL+
Sbjct: 179 KIVDFGLSAVFENQKK-----MKERLGTAYYIAPEVLRKKYDE-KCDVWSIGVILFILLA 232
Query: 500 GQKPL 504
G P
Sbjct: 233 GYPPF 237
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++ D +I DFGLAR V D + + F+ +
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYVAT 192
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQKPLDVAGAEEGFKG-NLVDWVNHLV 525
Y APE K D++ G +L E+LS +P+ F G + +D +NH++
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI--------FPGKHYLDQLNHIL 243
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 32/181 (17%)
Query: 337 FR-SEMNRLGQLRHPNLVPLLGFCVVE-------EERLLVYKHMPNGTLYSLLHGNGVDN 388
FR +E+ LRH N+ LGF + + L+ + G+LY L +D
Sbjct: 77 FRETELYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT 133
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLH---HGCQ--PPYMHQYISSNVILIDDDFDARITD 443
+ LRI + + GLA LH G Q P H+ + S IL+ + I D
Sbjct: 134 V--------SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 185
Query: 444 FGLARLVGSRDPNDSSFVHG-DLGEFGYVAPEYSSTMV------ASLKGDVYGFGIVLLE 496
GLA ++ S+ N + +G Y+APE + + + D++ FG+VL E
Sbjct: 186 LGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWE 244
Query: 497 L 497
+
Sbjct: 245 V 245
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 33/205 (16%)
Query: 318 DASALAIKRLSACKLSEKQFRSEMNRLGQLRHP-------------NLVPLLGFCVVEEE 364
D+ AIK++ + SE+ L L H N V + +
Sbjct: 30 DSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
+ ++ NGTLY L+H ++ W R+ L+++H +H+
Sbjct: 90 LFIQMEYCENGTLYDLIHSENLNQQRDEY--W----RLFRQILEALSYIH---SQGIIHR 140
Query: 425 YISSNVILIDDDFDARITDFGLA----------RLVGSRDPNDSSFVHGDLGEFGYVAPE 474
+ I ID+ + +I DFGLA +L P S + +G YVA E
Sbjct: 141 DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200
Query: 475 -YSSTMVASLKGDVYGFGIVLLELL 498
T + K D+Y GI+ E++
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
L H Q +++ + +L+DDD + RI+D GLA + + + G G G++A
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA----GQTKTKGYAGTPGFMA 357
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
PE D + G+ L E+++ + P G
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
L H Q +++ + +L+DDD + RI+D GLA + + + G G G++A
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA----GQTKTKGYAGTPGFMA 357
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
PE D + G+ L E+++ + P G
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 325 KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN 384
KR K ++ E+ L QL HPN++ L F + LV + G L+ +
Sbjct: 67 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 126
Query: 385 GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID---DDFDARI 441
+ + RI G+ ++H + +H+ + +L++ D + RI
Sbjct: 127 KRFSEVDAA-------RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 176
Query: 442 TDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSG 500
DFGL+ S+ D +G Y+APE K DV+ G++L LLSG
Sbjct: 177 IDFGLSTHFEASKKMKDK------IGTAYYIAPEVLHGTYDE-KCDVWSTGVILYILLSG 229
Query: 501 QKPLDVAGAEE 511
P + GA E
Sbjct: 230 CPPFN--GANE 238
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
L H Q +++ + +L+DDD + RI+D GLA + + + G G G++A
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA----GQTKTKGYAGTPGFMA 357
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
PE D + G+ L E+++ + P G
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
L H Q +++ + +L+DDD + RI+D GLA + + + G G G++A
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA----GQTKTKGYAGTPGFMA 357
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
PE D + G+ L E+++ + P G
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 429 NVILID--DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGD 486
N++ D D+ + +I DFG ARL P D+ + Y APE + D
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARL----KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCD 191
Query: 487 VYGFGIVLLELLSGQKPL 504
++ G++L +LSGQ P
Sbjct: 192 LWSLGVILYTMLSGQVPF 209
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 LPYVVQLDLSNNHLSGPIPPQIVECXXXXXXXXXXXXXXXXIPFEVSRLDRLKEFSVAGN 176
+PY+ L+L +N +SG IP ++ + IP +S L L E ++ N
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Query: 177 DLSGTIPP--DLARFPEESFDGN 197
+LSG IP FP F N
Sbjct: 712 NLSGPIPEMGQFETFPPAKFLNN 734
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Query: 70 RIISLTLSSMQLSGQLPESLHLCHXXXXXXXXXXXXXXXIPVDLCKWLPYVVQLDLSNNH 129
++SL LS LSG +P SL IP +L ++ + L L N
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL-MYVKTLETLILDFND 474
Query: 130 LSGPIPPQIVECXXXXXXXXXXXXXXXXIPFEVSRLDRLKEFSVAGNDLSGTIPPDLA 187
L+G IP + C IP + RL+ L ++ N SG IP +L
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 532
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 109 IPVDLCKWLPYVVQLDLSNNHLSGPIPPQIVECXXXXXXXXXXXXX--XXXIPFEVSRLD 166
+P L ++ LDLS+N+ SGPI P + + IP +S
Sbjct: 356 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 415
Query: 167 RLKEFSVAGNDLSGTIPPDLARF 189
L ++ N LSGTIP L
Sbjct: 416 ELVSLHLSFNYLSGTIPSSLGSL 438
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 248 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 293
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 294 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 117 LPYVVQLDLSNNHLSGPIPPQIVECXXXXXXXXXXXXXXXXIPFEVSRLDRLKEFSVAGN 176
+PY+ L+L +N +SG IP ++ + IP +S L L E ++ N
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Query: 177 DLSGTIPP--DLARFPEESFDGN 197
+LSG IP FP F N
Sbjct: 715 NLSGPIPEMGQFETFPPAKFLNN 737
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 1/118 (0%)
Query: 70 RIISLTLSSMQLSGQLPESLHLCHXXXXXXXXXXXXXXXIPVDLCKWLPYVVQLDLSNNH 129
++SL LS LSG +P SL IP +L ++ + L L N
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL-MYVKTLETLILDFND 477
Query: 130 LSGPIPPQIVECXXXXXXXXXXXXXXXXIPFEVSRLDRLKEFSVAGNDLSGTIPPDLA 187
L+G IP + C IP + RL+ L ++ N SG IP +L
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 109 IPVDLCKWLPYVVQLDLSNNHLSGPIPPQIVECXXXXXXXXXXXXX--XXXIPFEVSRLD 166
+P L ++ LDLS+N+ SGPI P + + IP +S
Sbjct: 359 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS 418
Query: 167 RLKEFSVAGNDLSGTIPPDLARF 189
L ++ N LSGTIP L
Sbjct: 419 ELVSLHLSFNYLSGTIPSSLGSL 441
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 123 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 168
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 169 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 262 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 307
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 308 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 325 KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN 384
KR K ++ E+ L QL HPN++ L F + LV + G L+ +
Sbjct: 61 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR 120
Query: 385 GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFDARI 441
+ + RI G+ ++H + +H+ + +L++ D + RI
Sbjct: 121 KRFSEVDAA-------RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 442 TDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSG 500
DFGL+ S+ D +G Y+APE K DV+ G++L LLSG
Sbjct: 171 IDFGLSTHFEASKKMKDK------IGTAYYIAPEVLHGTYDE-KCDVWSTGVILYILLSG 223
Query: 501 QKPLDVAGAEE 511
P + GA E
Sbjct: 224 CPPFN--GANE 232
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 123 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 168
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 169 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 123 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 168
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 169 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 122 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 167
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 168 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+L+D + ++ DFG+ + ++F G Y+APE M+ D +
Sbjct: 155 VLLDHEGHCKLADFGMCKEGICNGVTTATFC----GTPDYIAPEILQEMLYGPAVDWWAM 210
Query: 491 GIVLLELLSGQKPLDVAGAEEGFKGNLVDWV 521
G++L E+L G P + ++ F+ L D V
Sbjct: 211 GVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 16/175 (9%)
Query: 332 LSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLS 391
L + ++E++ + QL HP L+ L + E +L+ + + G L+ + + +
Sbjct: 90 LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA 149
Query: 392 GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD--FDARITDFGLARL 449
V+++ + A GL +H +H I I+ + +I DFGLA
Sbjct: 150 EVINYMRQ------ACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATK 200
Query: 450 VGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ +P++ V EF APE D++ G++ LLSG P
Sbjct: 201 L---NPDEIVKVTTATAEFA--APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 287 LADLLAATNSFAVENIIISTRTGVSYKAVLPDASALAIKR-------------LSACKLS 333
+A+L A + + V+ I S G V + +AIKR LS L
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 334 EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEE----RLLVYKHMPNGTLYSLLHGNGVDNT 389
++ R E+ L HPN++ L V EE +L + + L ++H + +
Sbjct: 74 KRVLR-EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVIS 132
Query: 390 LSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARL 449
+ + + +G+ +H P N++L D++ D I DF LAR
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHP--------GNILLADNN-DITICDFNLAR- 182
Query: 450 VGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG-----DVYGFGIVLLELLS 499
+ D N + +V Y APE +V KG D++ G V+ E+ +
Sbjct: 183 EDTADANKTHYV----THRWYRAPE----LVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 93/235 (39%), Gaps = 41/235 (17%)
Query: 287 LADLLAATNSFAVENIIISTRTGVSYKAVLPDASALAIKR-------------LSACKLS 333
+A+L A + + V+ I S G V + +AIKR LS L
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 334 EKQFRSEMNRLGQLRHPNLVPLLGFCVVEEE----RLLVYKHMPNGTLYSLLHGNGVDNT 389
++ R E+ L HPN++ L V EE +L + + L ++H + +
Sbjct: 74 KRVLR-EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVIS 132
Query: 390 LSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARL 449
+ + + +G+ +H P N++L D++ D I DF LAR
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHP--------GNILLADNN-DITICDFNLAR- 182
Query: 450 VGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKG-----DVYGFGIVLLELLS 499
+ D N + +V Y APE +V KG D++ G V+ E+ +
Sbjct: 183 EDTADANKTHYV----THRWYRAPE----LVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 23/200 (11%)
Query: 318 DASALAIKR--LSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNG 375
D AIKR L +L+ ++ E+ L +L HP +V + + + P
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88
Query: 376 TLY---SLLHGNGVDNTLSGVLDWSTR-----LRIGMGASRGLAWLHHGCQPPYMHQYIS 427
LY L + + ++G R L I + + + +LH MH+ +
Sbjct: 89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLK 145
Query: 428 -SNVILIDDDFDARITDFGLARLVGSRDPNDSSFV--------HGDLGEFGYVAPEYSST 478
SN+ DD ++ DFGL + + + G +G Y++PE
Sbjct: 146 PSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204
Query: 479 MVASLKGDVYGFGIVLLELL 498
S K D++ G++L ELL
Sbjct: 205 NSYSHKVDIFSLGLILFELL 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 325 KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN 384
KR K ++ E+ L QL HPN++ L F + LV + G L+ +
Sbjct: 84 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--- 140
Query: 385 GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFDARI 441
+ +D + RI G+ ++H + +H+ + +L++ D + RI
Sbjct: 141 -ISRKRFSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 193
Query: 442 TDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSG 500
DFGL+ S+ D +G Y+APE K DV+ G++L LLSG
Sbjct: 194 IDFGLSTHFEASKKMKDK------IGTAYYIAPEVLHGTYDE-KCDVWSTGVILYILLSG 246
Query: 501 QKPLDVAGAEE 511
P + GA E
Sbjct: 247 CPPFN--GANE 255
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 325 KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN 384
KR K ++ E+ L QL HPN++ L F + LV + G L+ +
Sbjct: 85 KRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--- 141
Query: 385 GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFDARI 441
+ +D + RI G+ ++H + +H+ + +L++ D + RI
Sbjct: 142 -ISRKRFSEVDAA---RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 194
Query: 442 TDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSG 500
DFGL+ S+ D +G Y+APE K DV+ G++L LLSG
Sbjct: 195 IDFGLSTHFEASKKMKDK------IGTAYYIAPEVLHGTYDE-KCDVWSTGVILYILLSG 247
Query: 501 QKPLDVAGAEE 511
P + GA E
Sbjct: 248 CPPFN--GANE 256
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNG-VDNTLSGVLDWS 397
+E+ L +L HP ++ + F E+ +V + M G L+ + GN + + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 398 TRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDP 455
L + G+ +H +P NV+L + D +ITDFG ++++G
Sbjct: 129 MLLAVQYLHENGI--IHRDLKP--------ENVLLSSQEEDCLIKITDFGHSKILG---- 174
Query: 456 NDSSFVHGDLGEFGYVAPEY---SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++S + G Y+APE T + D + G++L LSG P
Sbjct: 175 -ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 102/268 (38%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + +L H N+V +G + R ++ + M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 175
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 176 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 232 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 273
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 274 PVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 102/268 (38%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + +L H N+V +G + R ++ + M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT 189
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 190 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 246 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 287
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 288 PVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 21/162 (12%)
Query: 349 HPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASR 408
HPN++ L LV+ M G L+ L T L +I
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKETRKIMRALLE 135
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
+ LH + +H+ + IL+DDD + ++TDFG + DP + + G
Sbjct: 136 VICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEK--LRSVCGTP 187
Query: 469 GYVAPE-YSSTMVASLKG-----DVYGFGIVLLELLSGQKPL 504
Y+APE +M + G D++ G+++ LL+G P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 21/186 (11%)
Query: 330 CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDN 388
C + EK+ L L P + L C +RL V +++ G L + G
Sbjct: 65 CTMVEKRV------LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFK 118
Query: 389 TLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLAR 448
V ++ + IG L +LH + +++ + + +++D + +I DFG+ +
Sbjct: 119 EPQAVF-YAAEISIG------LFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
Query: 449 LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAG 508
F G Y+APE + D + +G++L E+L+GQ P D
Sbjct: 169 EHMMDGVTTREFC----GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 224
Query: 509 AEEGFK 514
+E F+
Sbjct: 225 EDELFQ 230
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 21/162 (12%)
Query: 349 HPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASR 408
HPN++ L LV+ M G L+ L T L +I
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKETRKIMRALLE 122
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
+ LH + +H+ + IL+DDD + ++TDFG + DP + + G
Sbjct: 123 VICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEK--LREVCGTP 174
Query: 469 GYVAPE-YSSTMVASLKG-----DVYGFGIVLLELLSGQKPL 504
Y+APE +M + G D++ G+++ LL+G P
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+++D + +I DFG+ + + D G Y+APE + D + F
Sbjct: 473 VMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 491 GIVLLELLSGQKPLDVAGAEEGFK 514
G++L E+L+GQ P + +E F+
Sbjct: 529 GVLLYEMLAGQAPFEGEDEDELFQ 552
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR + G + Y APE + M + D++ G ++
Sbjct: 162 CELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMA 214
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 215 ELLTGR 220
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 23/191 (12%)
Query: 325 KRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGN 384
KR K ++ E+ L QL HPN+ L F + LV + G L+ +
Sbjct: 61 KRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI--- 117
Query: 385 GVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFDARI 441
+ +D + RI G+ + H + +H+ + +L++ D + RI
Sbjct: 118 -ISRKRFSEVDAA---RIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRI 170
Query: 442 TDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSG 500
DFGL+ S+ D +G Y+APE K DV+ G++L LLSG
Sbjct: 171 IDFGLSTHFEASKKXKDK------IGTAYYIAPEVLHGTYDE-KCDVWSTGVILYILLSG 223
Query: 501 QKPLDVAGAEE 511
P + GA E
Sbjct: 224 CPPFN--GANE 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 79/202 (39%), Gaps = 36/202 (17%)
Query: 325 KRLSACKLSEKQFRSEMNRLGQ----------LRHPNLVPLLGFCVVEEERLLVYKHMPN 374
K++ A K KQ E N + L HP LV L EE+ +V +
Sbjct: 40 KKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L L N V V + L + + + +H +P + IL+D
Sbjct: 100 GDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQRIIHRDMKP---------DNILLD 149
Query: 435 DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF---- 490
+ ITDF +A ++ P ++ + G Y+APE M +S KG Y F
Sbjct: 150 EHGHVHITDFNIAAML----PRETQ-ITTMAGTKPYMAPE----MFSSRKGAGYSFAVDW 200
Query: 491 ---GIVLLELLSGQKPLDVAGA 509
G+ ELL G++P + +
Sbjct: 201 WSLGVTAYELLRGRRPYHIRSS 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 39/195 (20%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGF---CVVEEERLLVYKHMPNG 375
+A+K+LS + K+ E+ L ++H N++ LL EE VY
Sbjct: 79 IAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVY------ 132
Query: 376 TLYSLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILI 433
L + L G ++N + + D + I RGL ++H +H+ + + + +
Sbjct: 133 -LVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAV 187
Query: 434 DDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGD 486
++D + +I DFGLAR H D GYVA + M ++ D
Sbjct: 188 NEDCELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVD 234
Query: 487 VYGFGIVLLELLSGQ 501
++ G ++ ELL+G+
Sbjct: 235 IWSVGCIMAELLTGR 249
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 18/216 (8%)
Query: 292 AATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPN 351
A ++ F VE+ + T + Y+ ++ + +K R+E+ L +L HPN
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 352 LVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
++ L E LV + + G L+ + V+ D + ++ + A +A
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRI----VEKGYYSERDAADAVKQILEA---VA 162
Query: 412 WLHHGCQPPYMHQYISSNVILIDD---DFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
+LH +H+ + +L D +I DFGL+++V + G
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-----EHQVLMKTVCGTP 214
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
GY APE + D++ GI+ LL G +P
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 117
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT 174
Query: 435 DDFD---ARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 175 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 230
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 231 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 272
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 273 PVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 101
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + + D + I RGL ++H +H+ + + + +++D
Sbjct: 102 THLMGADLNNIVKCAKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 158 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 394 LDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSR 453
LD L + ++G+ ++H +H+ + + I + D +I DFGL +
Sbjct: 133 LDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL--- 186
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGF 513
ND G Y++PE S+ + D+Y G++L ELL D A F
Sbjct: 187 -KNDGKRTRSK-GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTAFETSKF 241
Query: 514 KGNLVDWVNHLVIAGRSRDVVDKSL----YGRGNDDEIMQFLRV 553
+L D + + + + ++ K L R N EI++ L V
Sbjct: 242 FTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 285
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 157
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 157
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 110
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 167 XELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 58 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 117
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 118 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT 174
Query: 435 DDFD---ARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 175 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 230
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 231 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 272
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 273 PVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 110
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 167 XELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + + L + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 161
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 162 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 21/162 (12%)
Query: 349 HPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASR 408
HPN++ L LV+ M G L+ L T L +I
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKETRKIMRALLE 135
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
+ LH + +H+ + IL+DDD + ++TDFG + DP + + G
Sbjct: 136 VICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEK--LREVCGTP 187
Query: 469 GYVAPE-YSSTMVASLKG-----DVYGFGIVLLELLSGQKPL 504
Y+APE +M + G D++ G+++ LL+G P
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLA-RLVGSRDPNDSSFVHGDLGEFGYVAPEY----- 475
+H+ + + IL+D+ ++ DFG++ RLV + + S+ G Y+APE
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA------GCAAYMAPERIDPPD 200
Query: 476 SSTMVASLKGDVYGFGIVLLELLSGQKP 503
+ ++ DV+ GI L+EL +GQ P
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR + G + Y APE + M + D++ G ++
Sbjct: 162 CELKILDFGLARHTDDE-------MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 215 ELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 112
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR + G + Y APE + M + D++ G ++
Sbjct: 169 CELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 222 ELLTGR 227
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 165
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 166 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 206
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 112
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR + G + Y APE + M + D++ G ++
Sbjct: 169 CELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 222 ELLTGR 227
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 175
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 176 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 232 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 273
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 274 PVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 50 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 109
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 110 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT 166
Query: 435 DDFD---ARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 167 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 222
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 223 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 264
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 265 PVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 112
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR + G + Y APE + M + D++ G ++
Sbjct: 169 CELKILDFGLARHTADE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 222 ELLTGR 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 159
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 160 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 162
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 163 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 157
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDW 396
+E++ L L HPN++ L F V E+++ LV + G L+ + D
Sbjct: 95 NEISLLKSLDHPNIIKL--FDVFEDKKYFYLVTEFYEGGELFEQIIN-------RHKFDE 145
Query: 397 STRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD---FDARITDFGLARLVGSR 453
I G+ +LH + +H+ I IL+++ + +I DFGL+ S+
Sbjct: 146 CDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SK 201
Query: 454 DPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
D + LG Y+APE K DV+ G+++ LL G P
Sbjct: 202 DYK----LRDRLGTAYYIAPEVLKKKYNE-KCDVWSCGVIMYILLCGYPPF 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYTH-EVVTLWYRAPEILLGXKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 165
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 166 TYTH-EVVTLWYRAPEILLGXKYYSTAV-----DIWSLGCIFAEMVT 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYTH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 116
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 172
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 173 XELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 220 VGCIMAELLTGR 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 110
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 167 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 49 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 104
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 105 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 160
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 161 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 207
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 208 VGCIMAELLTGR 219
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 47 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 102
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 103 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 158
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 159 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 206 VGCIMAELLTGR 217
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 181
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 182 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 237
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 238 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 279
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 280 PVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 157
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 33/205 (16%)
Query: 318 DASALAIKRLSACKLSEKQFRSEMNRLGQLRHP-------------NLVPLLGFCVVEEE 364
D+ AIK++ + SE+ L L H N V + +
Sbjct: 30 DSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
+ ++ N TLY L+H ++ W R+ L+++H +H+
Sbjct: 90 LFIQMEYCENRTLYDLIHSENLNQQRDEY--W----RLFRQILEALSYIH---SQGIIHR 140
Query: 425 YISSNVILIDDDFDARITDFGLA----------RLVGSRDPNDSSFVHGDLGEFGYVAPE 474
+ I ID+ + +I DFGLA +L P S + +G YVA E
Sbjct: 141 DLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200
Query: 475 -YSSTMVASLKGDVYGFGIVLLELL 498
T + K D+Y GI+ E++
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 128
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 184
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 185 CELKILDFGLAR-------------HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 232 VGCIMAELLTGR 243
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 73 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG 132
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 189
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 190 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 246 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 287
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 288 PVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 60 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 115
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 116 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 171
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 172 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 218
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 219 VGCIMAELLTGR 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 101
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 158 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 101
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 158 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 205 VGCIMAELLTGR 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 57 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 112
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 113 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 169 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 215
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 216 VGCIMAELLTGR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 XELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 125
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR + G + Y APE + M + D++ G ++
Sbjct: 182 CELKILDFGLARHTDDE-------MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 235 ELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 48 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 103
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 104 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 159
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 160 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 206
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 207 VGCIMAELLTGR 218
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 47 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 102
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 103 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 158
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 159 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 205
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 206 VGCIMAELLTGR 217
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 107
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 164 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 157
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 158 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 107
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 164 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 107
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 164 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 135 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 191
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 192 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 247
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 248 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 289
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 290 PVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+++D + +I DFG+ + + D G Y+APE + D + F
Sbjct: 152 VMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 491 GIVLLELLSGQKPLDVAGAEEGFK 514
G++L E+L+GQ P + +E F+
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQ 231
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 77/205 (37%), Gaps = 33/205 (16%)
Query: 318 DASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLG------------FCVVEEER 365
D+ AIK++ + SE+ L L H +V V ++
Sbjct: 30 DSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKST 89
Query: 366 LLV-YKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQ 424
L + ++ N TLY L+H ++ W R+ L+++H +H+
Sbjct: 90 LFIQXEYCENRTLYDLIHSENLNQQRDEY--W----RLFRQILEALSYIH---SQGIIHR 140
Query: 425 YISSNVILIDDDFDARITDFGLARLV----------GSRDPNDSSFVHGDLGEFGYVAPE 474
+ I ID+ + +I DFGLA+ V P S + +G YVA E
Sbjct: 141 NLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATE 200
Query: 475 -YSSTMVASLKGDVYGFGIVLLELL 498
T + K D Y GI+ E +
Sbjct: 201 VLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 111
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 168 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 215 VGCIMAELLTGR 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 162 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 160
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 161 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 161
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 162 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 160
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 161 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLSA---CKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 62 VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 117
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 173
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 174 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 221 VGCIMAELLTGR 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 55 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 110
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 111 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 167 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 213
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 214 VGCIMAELLTGR 225
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 162
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 163 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 46 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 101
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR D + FV Y APE + M + D++ G ++
Sbjct: 158 CELKILDFGLAR---HTDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 211 ELLTGR 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 159
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 160 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 61 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 116
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 117 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 172
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 173 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 219
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 220 VGCIMAELLTGR 231
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 159
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 160 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLSAC--KLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 73 PSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 132
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 189
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLG--EFGYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 190 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 245
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 246 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 287
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 288 PVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 62 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 117
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 173
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 174 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 221 VGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 62 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 117
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 118 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 173
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 174 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 220
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 221 VGCIMAELLTGR 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR D + FV Y APE + M + D++ G ++
Sbjct: 162 CELKILDFGLAR---HTDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 215 ELLTGR 220
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKP---------ENLLINTEGAIKLADFGLARAFGV---PVR 159
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 160 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 21/186 (11%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYS-STMVASLKGDVYGFGIVLL 495
+ +I DFGLAR D + FV Y APE + M + D++ G ++
Sbjct: 162 CELKILDFGLAR---HTDDEMAGFV----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 496 ELLSGQ 501
ELL+G+
Sbjct: 215 ELLTGR 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 52 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 107
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 108 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 164 SELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 210
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 211 VGCIMAELLTGR 222
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 85 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 144
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 145 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 201
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + S + G ++ PE + + K D +
Sbjct: 202 CPGPGRVAKIGDFGMARDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 257
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 258 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 299
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 300 PVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKP---------ENLLINTEGAIKLADFGLARAFGV---PVR 160
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 161 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 161
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 162 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKP---------ENLLINTEGAIKLADFGLARAFGV---PVR 158
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 159 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 199
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 69 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 124
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 181 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 228 VGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 125
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 182 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 229 VGCIMAELLTGR 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 111
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 168 SELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 215 VGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 111
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 168 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 215 VGCIMAELLTGR 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 69 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 124
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 181 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 227
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 228 VGCIMAELLTGR 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + + +++D + RI DFGLAR + G +
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE-------MTGYVAT 183
Query: 468 FGYVAPEYS-STMVASLKGDVYGFGIVLLELLSGQ 501
Y APE + M + D++ G ++ ELL G+
Sbjct: 184 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 128
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 129 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 184
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 185 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 231
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 232 VGCIMAELLTGR 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 70 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 125
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 182 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 228
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 229 VGCIMAELLTGR 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 401 RIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA-RLVGSRDPNDSS 459
+I + + L L + +H+ I + IL+D + ++ DFG++ +LV DS
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLV------DSI 180
Query: 460 FVHGDLGEFGYVAPEY----SSTMVASLKGDVYGFGIVLLELLSGQKP 503
D G Y+APE +S ++ DV+ GI L EL +G+ P
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 90/237 (37%), Gaps = 26/237 (10%)
Query: 273 VQVSLFQKPIVKVKLADL----LAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLS 328
++VSL KP +V + + L +F ++ TG Y + + K
Sbjct: 137 MEVSL-AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV 195
Query: 329 ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
A L+E + L RHP L L + V ++ G L+ L V +
Sbjct: 196 AHTLTENRV------LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS 249
Query: 389 TLSGVLDWSTRLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
R R G L +LH + +++ + +++D D +ITDFGL
Sbjct: 250 --------EDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ D + + G Y+APE D +G G+V+ E++ G+ P
Sbjct: 300 K----EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 56 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 111
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DFGLAR H D GYVA + M + D++
Sbjct: 168 CELKILDFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 215 VGCIMAELLTGR 226
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 20/214 (9%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
+ FA+ TG+ Y A R S +S ++ E++ L Q+ H N++
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQ---SRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 354 PLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L + +L+ + + G L+ L + + ++ G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 414 HHGCQPPYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGY 470
H +P N++L+D + ++ DFGLA + D G +
Sbjct: 138 HFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEF 184
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
VAPE + L+ D++ G++ LLSG P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 90/237 (37%), Gaps = 26/237 (10%)
Query: 273 VQVSLFQKPIVKVKLADL----LAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLS 328
++VSL KP +V + + L +F ++ TG Y + + K
Sbjct: 134 MEVSL-AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV 192
Query: 329 ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDN 388
A L+E + L RHP L L + V ++ G L+ L V +
Sbjct: 193 AHTLTENRV------LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS 246
Query: 389 TLSGVLDWSTRLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
R R G L +LH + +++ + +++D D +ITDFGL
Sbjct: 247 --------EDRARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ D + + G Y+APE D +G G+V+ E++ G+ P
Sbjct: 297 K----EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
+ FA+ TG+ Y A R S +S ++ E++ L Q+ H N++
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQ---SRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 354 PLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSG--VLDWSTRLRIGMGASRGLA 411
L + +L+ + + G L+ L +LS + ++ G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + ++ DFGLA + D G
Sbjct: 136 IAHFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTP 182
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 20/214 (9%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
+ FA+ TG+ Y A R S +S ++ E++ L Q+ H N++
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQ---SRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 354 PLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWL 413
L + +L+ + + G L+ L + + ++ G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDGVNYLHTKKIA 137
Query: 414 HHGCQPPYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGY 470
H +P N++L+D + ++ DFGLA + D G +
Sbjct: 138 HFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEF 184
Query: 471 VAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
VAPE + L+ D++ G++ LLSG P
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKP---------ENLLINTEGAIKLADFGLARAFGV---PVR 161
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 162 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 73/194 (37%), Gaps = 36/194 (18%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ L HPN+V L C V E + LV++H VD L+ LD
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH--------------VDQDLTTYLD 110
Query: 396 --------WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
T + RGL +LH +H+ + IL+ ++ DFGLA
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVA 507
R+ + S V Y APE + D++ G + E+ +KPL
Sbjct: 168 RIYSFQMALTSVVV-----TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRG 221
Query: 508 GAEEGFKGNLVDWV 521
++ G ++D +
Sbjct: 222 SSDVDQLGKILDVI 235
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + + +++D + RI DFGLAR + G +
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-------MTGYVAT 191
Query: 468 FGYVAPEYS-STMVASLKGDVYGFGIVLLELLSGQ 501
Y APE + M + D++ G ++ ELL G+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKP---------ENLLINTEGAIKLADFGLARAFGV---PVR 159
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 160 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 200
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + + +++D + RI DFGLAR + G +
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE-------MTGYVAT 191
Query: 468 FGYVAPEYS-STMVASLKGDVYGFGIVLLELLSGQ 501
Y APE + M + D++ G ++ ELL G+
Sbjct: 192 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 73/194 (37%), Gaps = 36/194 (18%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ L HPN+V L C V E + LV++H VD L+ LD
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH--------------VDQDLTTYLD 110
Query: 396 --------WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
T + RGL +LH +H+ + IL+ ++ DFGLA
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVA 507
R+ + S V Y APE + D++ G + E+ +KPL
Sbjct: 168 RIYSFQMALTSVVV-----TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRG 221
Query: 508 GAEEGFKGNLVDWV 521
++ G ++D +
Sbjct: 222 SSDVDQLGKILDVI 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 161
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 162 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 202
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 73/194 (37%), Gaps = 36/194 (18%)
Query: 341 MNRLGQLRHPNLVPLLGFCVV-----EEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLD 395
+ L HPN+V L C V E + LV++H VD L+ LD
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH--------------VDQDLTTYLD 110
Query: 396 --------WSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA 447
T + RGL +LH +H+ + IL+ ++ DFGLA
Sbjct: 111 KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLA 167
Query: 448 RLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVA 507
R+ + S V Y APE + D++ G + E+ +KPL
Sbjct: 168 RIYSFQMALTSVVV-----TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRG 221
Query: 508 GAEEGFKGNLVDWV 521
++ G ++D +
Sbjct: 222 SSDVDQLGKILDVI 235
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
+ FA+ TG+ Y A R S +S ++ E++ L Q+ H N++
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQ---SRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 354 PLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSG--VLDWSTRLRIGMGASRGLA 411
L + +L+ + + G L+ L +LS + ++ G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + ++ DFGLA + D G
Sbjct: 136 IAHFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTP 182
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 24/216 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
+ FA+ TG+ Y A R S +S ++ E++ L Q+ H N++
Sbjct: 22 SGQFAIVKKCREKSTGLEYAAKFIKKRQ---SRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 354 PLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSG--VLDWSTRLRIGMGASRGLA 411
L + +L+ + + G L+ L +LS + ++ G+
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
H +P N++L+D + ++ DFGLA + D G
Sbjct: 136 IAHFDLKP--------ENIMLLDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTP 182
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+VAPE + L+ D++ G++ LLSG P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT-LSGVLDWST 398
E++ L +L HPN+V LL E + LV++ + + L + + + L + +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 399 RLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS 458
+L G+ LH +P +LI+ + ++ DFGLAR G
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKP---------QNLLINTEGAIKLADFGLARAFGV---PVR 160
Query: 459 SFVHGDLGEFGYVAPE------YSSTMVASLKGDVYGFGIVLLELLS 499
++ H ++ Y APE Y ST V D++ G + E+++
Sbjct: 161 TYXH-EVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVT 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+GL +LH + +H+ I + IL++ + A++ DFG+A + + + G
Sbjct: 136 KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI----GT 188
Query: 468 FGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKP 503
++APE + + D++ GI +E+ G+ P
Sbjct: 189 PFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I D+GLAR H D GYVA + M + D++
Sbjct: 162 CELKILDYGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 23/215 (10%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPL 355
+F+V I+ TG + + D + K S+ LS + + E + L+HP++V L
Sbjct: 36 AFSVVRRCINRETGQQFAVKIVDVA----KFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 356 LGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA---W 412
L + +V++ M L + + S +R + A R
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI 151
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDA--RITDFGLARLVGSRDPNDSSFVHG-DLGEFG 469
+H +P NV+L + A ++ DFG+A +G +S V G +G
Sbjct: 152 IHRDVKP--------ENVLLASKENSAPVKLGDFGVAIQLG-----ESGLVAGGRVGTPH 198
Query: 470 YVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
++APE DV+G G++L LLSG P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 17/181 (9%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYS-LLHGNGVDNTLSGV 393
+Q +E+ L L HPN++ + +V + G L ++ LS
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE- 123
Query: 394 LDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLV 450
+ L M LA+ H +H+ + IL D +I DFGLA L
Sbjct: 124 -GYVAELMKQM--MNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177
Query: 451 GSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAE 510
S + + ++ G Y+APE V + K D++ G+V+ LL+G P E
Sbjct: 178 KSDEHSTNA-----AGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLE 231
Query: 511 E 511
E
Sbjct: 232 E 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 59 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 118
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 119 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 175
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYG 489
A+I DFG+A+ + S + G ++ PE + + K D +
Sbjct: 176 CPGPGRVAKIGDFGMAQDIY----RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 231
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 232 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 273
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 274 PVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 84/230 (36%), Gaps = 29/230 (12%)
Query: 331 KLSEKQFRSEMN-RLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNT 389
K EK SE N L ++HP LV L ++ V ++ G L+ L
Sbjct: 79 KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC--- 135
Query: 390 LSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARL 449
L+ R AS L +LH +++ + IL+D +TDFGL +
Sbjct: 136 ---FLEPRARFYAAEIAS-ALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKE 188
Query: 450 VGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGA 509
+ S+F G Y+APE D + G VL E+L G P
Sbjct: 189 NIEHNSTTSTFC----GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244
Query: 510 EEGF----------KGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIMQ 549
E + K N+ + HL+ +D + G D+ M+
Sbjct: 245 AEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR----LGAKDDFME 290
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 100/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 136 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 192
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + + G ++ PE + + K D +
Sbjct: 193 CPGPGRVAKIGDFGMARDIY----RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 248
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 249 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 290
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 291 PVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 100/268 (37%), Gaps = 33/268 (12%)
Query: 317 PDASALAIKRLS--ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPN 374
P +A+K L + E F E + + H N+V +G + R ++ + M
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 375 GTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILID 434
G L S L + L L + + G +L ++H+ I++ L+
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLT 215
Query: 435 ---DDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF--GYVAPEYSSTMVASLKGDVYG 489
A+I DFG+AR + + G ++ PE + + K D +
Sbjct: 216 CPGPGRVAKIGDFGMARDIY----RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWS 271
Query: 490 FGIVLLELLS-GQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEIM 548
FG++L E+ S G P +E V V +G D K+ G
Sbjct: 272 FGVLLWEIFSLGYMPYPSKSNQE---------VLEFVTSGGRMD-PPKNCPG-------- 313
Query: 549 QFLRVACSCVVSRPKDRPSMYQVYESLK 576
R+ C +P+DRP+ + E ++
Sbjct: 314 PVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 29/148 (19%)
Query: 428 SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDV 487
SN+ L+D +I DFGL + ND G Y++PE S+ + D+
Sbjct: 151 SNIFLVDTK-QVKIGDFGLVTSL----KNDGKRXRSK-GTLRYMSPEQISSQDYGKEVDL 204
Query: 488 YGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVNHLVIAGRSRDVVDKSLYGRGNDDEI 547
Y G++L ELL D A F +L D G D+ DK + +
Sbjct: 205 YALGLILAELLH---VCDTAFETSKFFTDLRD--------GIISDIFDK------KEKTL 247
Query: 548 MQFLRVACSCVVSRPKDRPSMYQVYESL 575
+Q L + +P+DRP+ ++ +L
Sbjct: 248 LQKL------LSKKPEDRPNTSEILRTL 269
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 23/173 (13%)
Query: 337 FRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDW 396
+E+ L +++H N+V L LV + + G L+ + GV D
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK----DA 108
Query: 397 STRLRIGMGASRGL---AWLHHGCQPPYMHQYISSNVILIDDDFDARI--TDFGLARLVG 451
S ++ + A + L +H +P N++ + + +++I TDFGL+++
Sbjct: 109 SLVIQQVLSAVKYLHENGIVHRDLKP--------ENLLYLTPEENSKIMITDFGLSKM-- 158
Query: 452 SRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ + G GYVAPE + S D + G++ LL G P
Sbjct: 159 ----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY---SST 478
+H+ + + +LI+ + D ++ DFGLAR++ ++S G YVA +
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 479 MVASLK----GDVYGFGIVLLELL 498
M+ S K DV+ G +L EL
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 21/186 (11%)
Query: 323 AIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLH 382
I + SA E+ L +L HPN++ L F ++E+ G LY+
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEILEDSSSFYIV----GELYT--G 105
Query: 383 GNGVDNTLS-GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFD 438
G D + RI G+ ++H + +H+ + IL++ D D
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCD 162
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGL+ ++ + +G Y+APE K DV+ G++L LL
Sbjct: 163 IKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDVWSAGVILYILL 216
Query: 499 SGQKPL 504
SG P
Sbjct: 217 SGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 21/186 (11%)
Query: 323 AIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLH 382
I + SA E+ L +L HPN++ L F ++E+ G LY+
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKL--FEILEDSSSFYIV----GELYT--G 105
Query: 383 GNGVDNTLS-GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFD 438
G D + RI G+ ++H + +H+ + IL++ D D
Sbjct: 106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCD 162
Query: 439 ARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
+I DFGL+ ++ + +G Y+APE K DV+ G++L LL
Sbjct: 163 IKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDVWSAGVILYILL 216
Query: 499 SGQKPL 504
SG P
Sbjct: 217 SGTPPF 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 105
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + +D
Sbjct: 106 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISD 158
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL 517
+ + G Y+APE D +G G+V+ E++ G+ P E F+ L
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 518 VDWVN 522
++ +
Sbjct: 219 MEEIR 223
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 105
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + S
Sbjct: 106 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL 517
+F G Y+APE D +G G+V+ E++ G+ P E F+ L
Sbjct: 163 KTFC----GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 518 VDWVN 522
++ +
Sbjct: 219 MEEIR 223
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 16/167 (9%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 105
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + +D
Sbjct: 106 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISD 158
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ + G Y+APE D +G G+V+ E++ G+ P
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 89/234 (38%), Gaps = 23/234 (9%)
Query: 291 LAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQ-LRH 349
L +F ++ TG Y + + K A L+E NR+ Q RH
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE-------NRVLQNSRH 67
Query: 350 PNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRI-GMGASR 408
P L L + V ++ G L+ L V + R R G
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS--------EDRARFYGAEIVS 119
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
L +LH + +++ + +++D D +ITDFGL + D + + G
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTP 173
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVN 522
Y+APE D +G G+V+ E++ G+ P E+ F+ L++ +
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 64/167 (38%), Gaps = 16/167 (9%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 110
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + +D
Sbjct: 111 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISD 163
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ + G Y+APE D +G G+V+ E++ G+ P
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 105
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + +D
Sbjct: 106 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISD 158
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL 517
+ + G Y+APE D +G G+V+ E++ G+ P E F+ L
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 518 VDWVN 522
++ +
Sbjct: 219 MEEIR 223
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 105
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + +D
Sbjct: 106 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISD 158
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL 517
+ + G Y+APE D +G G+V+ E++ G+ P E F+ L
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 518 VDWVN 522
++ +
Sbjct: 219 MEEIR 223
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 339 SEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWST 398
+E L RHP L L + V ++ G L+ L V
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--------EE 108
Query: 399 RLRI-GMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPND 457
R R G L +LH +++ I +++D D +ITDFGL + +D
Sbjct: 109 RARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISD 161
Query: 458 SSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNL 517
+ + G Y+APE D +G G+V+ E++ G+ P E F+ L
Sbjct: 162 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221
Query: 518 VDWVN 522
++ +
Sbjct: 222 MEEIR 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 89/234 (38%), Gaps = 23/234 (9%)
Query: 291 LAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQ-LRH 349
L +F ++ TG Y + + K A L+E NR+ Q RH
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE-------NRVLQNSRH 68
Query: 350 PNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRI-GMGASR 408
P L L + V ++ G L+ L V + R R G
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS--------EDRARFYGAEIVS 120
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
L +LH + +++ + +++D D +ITDFGL + D + + G
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTP 174
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVN 522
Y+APE D +G G+V+ E++ G+ P E+ F+ L++ +
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 228
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 89/234 (38%), Gaps = 23/234 (9%)
Query: 291 LAATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQ-LRH 349
L +F ++ TG Y + + K A L+E NR+ Q RH
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE-------NRVLQNSRH 69
Query: 350 PNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRI-GMGASR 408
P L L + V ++ G L+ L V + R R G
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS--------EDRARFYGAEIVS 121
Query: 409 GLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEF 468
L +LH + +++ + +++D D +ITDFGL + D + + G
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGATMKXFCGTP 175
Query: 469 GYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLVDWVN 522
Y+APE D +G G+V+ E++ G+ P E+ F+ L++ +
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++++ + +I DFG+AR + + F+ +
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQK 502
Y APE ++ + D++ G + E+L+ ++
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 44/164 (26%)
Query: 366 LLVYKHMPNGTLYSLLHGNGVDNTLSGVLDW-------STRLRIGMGAS----------- 407
LL+ KHM + + LL ++L D+ T L+ MG
Sbjct: 92 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVY 151
Query: 408 ---RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGD 464
+GL ++H +H+ + + +++D + +I DFGLAR H D
Sbjct: 152 QMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------------HAD 195
Query: 465 LGEFGYV------APEYS-STMVASLKGDVYGFGIVLLELLSGQ 501
GYV APE S M + D++ G ++ E+L+G+
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 23/101 (22%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
+GL ++H +H+ + + +++D + +I DFGLAR H D
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------------HADAEM 180
Query: 468 FGYV------APEYS-STMVASLKGDVYGFGIVLLELLSGQ 501
GYV APE S M + D++ G ++ E+L+G+
Sbjct: 181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I DF LAR H D GYVA + M + D++
Sbjct: 162 CELKILDFYLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 21/185 (11%)
Query: 324 IKRLSACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHG 383
I + SA E+ L +L HPN++ L F ++E+ G LY+ G
Sbjct: 55 INKASAKNKDTSTILREVELLKKLDHPNIMKL--FEILEDSSSFYIV----GELYT--GG 106
Query: 384 NGVDNTLS-GVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD---DFDA 439
D + RI G+ ++H + +H+ + IL++ D D
Sbjct: 107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDI 163
Query: 440 RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLS 499
+I DFGL+ ++ + +G Y+APE K DV+ G++L LLS
Sbjct: 164 KIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDVWSAGVILYILLS 217
Query: 500 GQKPL 504
G P
Sbjct: 218 GTPPF 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEY---SST 478
+H+ + + +LI+ + D ++ DFGLAR++ ++S G +VA +
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 479 MVASLK----GDVYGFGIVLLELL 498
M+ S K DV+ G +L EL
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 33/192 (17%)
Query: 322 LAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLY 378
+A+K+LS + K+ E+ L ++H N++ LL V R L + + L
Sbjct: 50 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD--VFTPARSL--EEFNDVYLV 105
Query: 379 SLLHGNGVDNTL--SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
+ L G ++N + + D + I RGL ++H +H+ + + + +++D
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 437 FDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSST-------MVASLKGDVYG 489
+ +I FGLAR H D GYVA + M + D++
Sbjct: 162 CELKILGFGLAR-------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 208
Query: 490 FGIVLLELLSGQ 501
G ++ ELL+G+
Sbjct: 209 VGCIMAELLTGR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 408 RGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGE 467
RGL ++H +H+ + + +L++++ + +I DFG+AR + + F+ +
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 468 FGYVAPEYSSTMVASLKG-DVYGFGIVLLELLSGQK 502
Y APE ++ + D++ G + E+L+ ++
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + ++ Y APE M
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMTPEVVTRYYRAPEVILGMGY 202
Query: 482 SLKGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 320 SALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGT 376
+ +AIK+L +L K+ E+ L +RH N++ LL +E +
Sbjct: 51 AKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE----TLDDFTDFY 106
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLR-IGMGASRGLAWLHHGCQPPYMHQYISSNVILIDD 435
L G + + R++ + +GL ++H +H+ + + +++
Sbjct: 107 LVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNE 163
Query: 436 DFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPE-------YSSTMVASLKGDVY 488
D + +I DFGLAR S + G + Y APE Y+ T+ D++
Sbjct: 164 DCELKILDFGLARQADSE-------MXGXVVTRWYRAPEVILNWMRYTQTV------DIW 210
Query: 489 GFGIVLLELLSGQ 501
G ++ E+++G+
Sbjct: 211 SVGCIMAEMITGK 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 311 SYKAVLPDASALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE---EE 364
+Y A+L +AIK+LS + K+ E+ + + H N++ LL + EE
Sbjct: 43 AYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS-TRLRIGMGASRGLAWLHHGCQPPYMH 423
VY M +D LS V+ R+ + L + H +H
Sbjct: 101 FQDVYIVM-----------ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL 483
+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 484 KGDVYGFGIVLLELLSG 500
D++ G+++ E++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 311 SYKAVLPDASALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE---EE 364
+Y A+L +AIK+LS + K+ E+ + + H N++ LL + EE
Sbjct: 43 AYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS-TRLRIGMGASRGLAWLHHGCQPPYMH 423
VY M +D LS V+ R+ + L + H +H
Sbjct: 101 FQDVYIVM-----------ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL 483
+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 484 KGDVYGFGIVLLELLSG 500
D++ G+++ E++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 24/188 (12%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E++ L L+H N+V L E+ LV++++ + L L G + V + +
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSS 459
L RGLA+ H + +H+ + +LI++ + ++ DFGLAR P +
Sbjct: 109 LL------RGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKT- 156
Query: 460 FVHGDLGEFGYVAPE-YSSTMVASLKGDVYGFGIVLLELLSGQKPLDVAGAEEGFKGNLV 518
++ Y P+ + S + D++G G + E+ +G +PL F G+ V
Sbjct: 157 -YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG-RPL--------FPGSTV 206
Query: 519 DWVNHLVI 526
+ H +
Sbjct: 207 EEQLHFIF 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 30/207 (14%)
Query: 316 LPDASALAIKRLSACKLSEKQFRSEMNRLGQLRH---PNLVPLLGFCVVEEERLLVYKHM 372
+P +A+KR+ A S++Q R M+ +R P V G E + + + M
Sbjct: 73 VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 132
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRL------RIGMGASRGLAWLHHGCQPPYMHQYI 426
+D V+D + +I + + L LH +H+ +
Sbjct: 133 ----------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDV 180
Query: 427 SSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA----S 482
+ +LI+ ++ DFG++ + DS D G Y+APE + + S
Sbjct: 181 KPSNVLINALGQVKMCDFGISGYL-----VDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 483 LKGDVYGFGIVLLELLSGQKPLDVAGA 509
+K D++ GI ++EL + P D G
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGT 262
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 418 QPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSS 477
Q Y+H+ I + +L+D + R+ DFG + SS +G Y++PE
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYISPEILQ 249
Query: 478 TMVASL-----KGDVYGFGIVLLELLSGQKPL 504
M + + D + G+ + E+L G+ P
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYIS-SNVILIDDDFDARITDFGLARLVGSRD---- 454
L I + + + +LH MH+ + SN+ DD ++ DFGL + +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQT 222
Query: 455 ---PNDSSFVH-GDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELL 498
P + H G +G Y++PE S K D++ G++L ELL
Sbjct: 223 VLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 418 QPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSS 477
Q Y+H+ I + +L+D + R+ DFG + SS +G Y++PE
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA---VGTPDYISPEILQ 265
Query: 478 TMVASL-----KGDVYGFGIVLLELLSGQKPL 504
M + + D + G+ + E+L G+ P
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 364 ERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMH 423
E +L+ ++ G ++SL L+ ++ + +R+ G+ +LH Q +H
Sbjct: 103 EIILILEYAAGGEIFSLCLPE-----LAEMVSENDVIRLIKQILEGVYYLH---QNNIVH 154
Query: 424 QYISSNVILIDDDF---DARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMV 480
+ IL+ + D +I DFG++R +G + + +G Y+APE +
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-----HACELREIMGTPEYLAPEILNYDP 209
Query: 481 ASLKGDVYGFGIVLLELLSGQKPL 504
+ D++ GI+ LL+ P
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDS------SFVHGDLGEFGYVAPEY 475
+H+ + + +LI+ + D ++ DFGLAR++ ++S S + + Y APE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEV 193
Query: 476 SSTMVASLKG-DVYGFGIVLLELL 498
T + DV+ G +L EL
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 96
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 97 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 154
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 155 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 198
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 21/149 (14%)
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
LV++ M G++ S +H N L + + + L +LH+ H+ +
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLHN---KGIAHRDL 137
Query: 427 SSNVILIDDDFD---ARITDFGLA---RLVGSRDPNDSSFVHGDLGEFGYVAPEY----- 475
IL + +I DFGL +L G P + + G Y+APE
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 476 SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ + D++ G++L LLSG P
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 104
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 162
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 163 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 206
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 104
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 162
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 163 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 206
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 51 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 104
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 162
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 163 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 206
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 30/207 (14%)
Query: 316 LPDASALAIKRLSACKLSEKQFRSEMNRLGQLRH---PNLVPLLGFCVVEEERLLVYKHM 372
+P +A+KR+ A S++Q R M+ +R P V G E + + + M
Sbjct: 29 VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88
Query: 373 PNGTLYSLLHGNGVDNTLSGVLDWSTRL------RIGMGASRGLAWLHHGCQPPYMHQYI 426
+D V+D + +I + + L LH +H+ +
Sbjct: 89 ----------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDV 136
Query: 427 SSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA----S 482
+ +LI+ ++ DFG++ + D D G Y+APE + + S
Sbjct: 137 KPSNVLINALGQVKMCDFGISGYLVDDVAKDI-----DAGCKPYMAPERINPELNQKGYS 191
Query: 483 LKGDVYGFGIVLLELLSGQKPLDVAGA 509
+K D++ GI ++EL + P D G
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGT 218
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 418 QPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSS 477
Q Y+H+ I + IL+D + R+ DFG + SS +G Y++PE
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA---VGTPDYISPEILQ 249
Query: 478 TMVASLKG------DVYGFGIVLLELLSGQKPL 504
M KG D + G+ + E+L G+ P
Sbjct: 250 AMEGG-KGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 25/212 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
T SF ++ TG Y + D + + L+EK+ +N P LV
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN------FPFLV 104
Query: 354 PLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
L F + L +V ++ P G ++S L G + ++ ++ + L
Sbjct: 105 KL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL 162
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
++ +P ++ID ++TDFGLA+ V R G Y+A
Sbjct: 163 IYRDLKP---------ENLMIDQQGYIKVTDFGLAKRVKGR-------TWXLCGTPEYLA 206
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
PE + + D + G+++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 161
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 162 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 205
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 161
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 162 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 205
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 124
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 125 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 182
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 183 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 226
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 161
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 162 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 205
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 43 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 96
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G ++ ++ + L
Sbjct: 97 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD 154
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 155 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 198
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 82/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 104
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G + ++ ++ + L
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLD 162
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 163 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 206
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 19/186 (10%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
+ F + + +L H +LV G C +E +LV + + G+L + L N N ++ +
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN--KNCINIL- 113
Query: 395 DWSTRLRIGMGASRGLAW-LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSR 453
W + ++ LAW +H + +H + + IL+ + D + G +
Sbjct: 114 -WK------LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKT---GNPPFIKLS 163
Query: 454 DPNDS-SFVHGDLGE--FGYVAPE-YSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAG 508
DP S + + D+ + +V PE + +L D + FG L E+ S G KPL
Sbjct: 164 DPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD 223
Query: 509 AEEGFK 514
++ +
Sbjct: 224 SQRKLQ 229
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 114 CKWLPYVVQLDLSNNHLSGPI----PPQIVECXXXXXXXXXXXXXXXXIPFEVSRLDRLK 169
C W ++ L+LS+N L+G + PP++ IP +V+ L L+
Sbjct: 424 CAWAESILVLNLSSNMLTGSVFRCLPPKV-------KVLDLHNNRIMSIPKDVTHLQALQ 476
Query: 170 EFSVAGNDLSGTIPPD 185
E +VA N L PD
Sbjct: 477 ELNVASNQLKSV--PD 490
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 311 SYKAVLPDASALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE---EE 364
+Y A+L +AIK+LS + K+ E+ + + H N++ LL + EE
Sbjct: 43 AYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS-TRLRIGMGASRGLAWLHHGCQPPYMH 423
VY M +D LS V+ R+ + L + H +H
Sbjct: 101 FQDVYIVM-----------ELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL 483
+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 484 KGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 311 SYKAVLPDASALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE---EE 364
+Y A+L +AIK+LS + K+ E+ + + H N++ LL + EE
Sbjct: 43 AYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS-TRLRIGMGASRGLAWLHHGCQPPYMH 423
VY M +D LS V+ R+ + L + H +H
Sbjct: 101 FQDVYIVM-----------ELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIH 149
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL 483
+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 484 KGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGY 202
Query: 482 SLKGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 149 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGY 203
Query: 482 SLKGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 204 KENVDIWSVGCIMGEMIKG 222
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + ++ Y APE M
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMEPEVVTRYYRAPEVILGMGY 202
Query: 482 SLKGDVYGFGIVLLELL 498
D++ G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 25/212 (11%)
Query: 294 TNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLV 353
T SF ++ TG Y + D + + L+EK+ +N P LV
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN------FPFLV 104
Query: 354 PLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
L F + L +V ++ P G ++S L G + ++ ++ + L
Sbjct: 105 KL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL 162
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
++ +P ++ID ++TDFGLA+ V R G Y+A
Sbjct: 163 IYRDLKP---------ENLMIDQQGYIQVTDFGLAKRVKGR-------TWXLCGTPEYLA 206
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
PE + + D + G+++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G ++ ++ + L
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD 161
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 162 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 205
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGY 202
Query: 482 SLKGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 311 SYKAVLPDASALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE---EE 364
+Y A+L +AIK+LS + K+ E+ + + H N++ LL + EE
Sbjct: 43 AYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS-TRLRIGMGASRGLAWLHHGCQPPYMH 423
VY M +D LS V+ R+ + L + H +H
Sbjct: 101 FQDVYIVM-----------ELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL 483
+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 RDLKPSNIVVKSDATLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 484 KGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 25/197 (12%)
Query: 311 SYKAVLPDASALAIKRLS---ACKLSEKQFRSEMNRLGQLRHPNLVPLLGFCVVE---EE 364
+Y A+L +AIK+LS + K+ E+ + + H N++ LL + EE
Sbjct: 43 AYDAIL--ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100
Query: 365 RLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWS-TRLRIGMGASRGLAWLHHGCQPPYMH 423
VY M +D LS V+ R+ + L + H +H
Sbjct: 101 FQDVYIVM-----------ELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 424 QYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASL 483
+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 484 KGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 205 NVDIWSVGCIMGEMIKG 221
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G ++ ++ + L
Sbjct: 104 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD 161
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 162 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 205
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 18/111 (16%)
Query: 408 RGLAWLHHGCQPPYMHQYIS-SNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLG 466
RGL ++H +H+ + +N+ + +D +I DFGLAR++ DP+ S G L
Sbjct: 131 RGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSH--KGHLS 182
Query: 467 EFGYVAPEYSSTMVA------SLKGDVYGFGIVLLELLSGQKPLDVAGAEE 511
E G V Y S + + D++ G + E+L+G+ AGA E
Sbjct: 183 E-GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF--AGAHE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 25/213 (11%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG Y + D + + L+EK+ +N P L
Sbjct: 51 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 104
Query: 353 VPLLGFCVVEEERL-LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLA 411
V L F + L +V +++P G ++S L G ++ ++ + L
Sbjct: 105 VKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLD 162
Query: 412 WLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYV 471
++ +P +LID ++TDFG A+ V R G Y+
Sbjct: 163 LIYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYL 206
Query: 472 APEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
APE + + D + G+++ E+ +G P
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 428 SNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
SN++ +D+ + RI DFG A+ + + ++ + +VAPE
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLERQGYDAA 200
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ G++L +L+G P
Sbjct: 201 CDIWSLGVLLYTMLTGYTPF 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 33/192 (17%)
Query: 333 SEKQFRSEMNRLGQLRHPNLVPLLGFCVVEEER--LLVYKHMPNGTLYSLLHGNGVDNTL 390
+++ FR M H N+V LL + +R LV+ +M L++++ N
Sbjct: 52 AQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD-LHAVIRAN------ 104
Query: 391 SGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLA--- 447
+L+ + + + + +LH G +H+ + + IL++ + ++ DFGL+
Sbjct: 105 --ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159
Query: 448 ---RLVGSRDP-----------NDSSFVHGDLGEFGYVAPEYSSTMVASLKG-DVYGFGI 492
R V + P +D + + Y APE KG D++ G
Sbjct: 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGC 219
Query: 493 VLLELLSGQKPL 504
+L E+L G KP+
Sbjct: 220 ILGEILCG-KPI 230
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 24/212 (11%)
Query: 296 SFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNLVPL 355
+F+V + TG Y A + + K+LSA + + + + RL L+H N+V L
Sbjct: 16 AFSVVRRCVKLCTGHEYAAKI-----INTKKLSARDHQKLEREARICRL--LKHSNIVRL 68
Query: 356 LGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHH 415
E LV+ + G L+ + ++ + + L + H
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASHCIQQILEAVLH 118
Query: 416 GCQPPYMHQYISSNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
Q +H+ + +L+ ++ DFGLA V D G G GY++
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV----QGDQQAWFGFAGTPGYLS 174
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
PE D++ G++L LL G P
Sbjct: 175 PEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 23/170 (13%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E+ L QL HPN++ L F + LV + G L+ + L
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-------ILRQKFSEVDA 106
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYIS-SNVILIDDDFDA--RITDFGLARL--VGSRD 454
I G +LH + +H+ + N++L DA +I DFGL+ VG +
Sbjct: 107 AVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK- 162
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ LG Y+APE K DV+ G++L LL G P
Sbjct: 163 ------MKERLGTAYYIAPEVLRKKYDE-KCDVWSCGVILYILLCGYPPF 205
>pdb|4FCY|A Chain A, Crystal Structure Of The Bacteriophage Mu Transpososome
pdb|4FCY|B Chain B, Crystal Structure Of The Bacteriophage Mu Transpososome
Length = 529
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 519 DWVNHLVIA-GRSRDVVDKSLYGRGNDDEIMQFLRVACSCVVSRPKDRPSMYQVYESLKS 577
DW LV G SR V KS + D++ QFL RP ++P+ + YE L+
Sbjct: 83 DWAAALVDGRGASRRNVHKSEF----DEDAWQFL----IADYLRP-EKPAFRKCYERLEL 133
Query: 578 MAEKHGFSEP 587
A +HG+S P
Sbjct: 134 AAREHGWSIP 143
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 17/185 (9%)
Query: 335 KQFRSEMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVL 394
+ F + + +L H +LV G CV +E +LV + + G+L + L N N ++ +
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN--KNCINIL- 113
Query: 395 DWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRD 454
W + + A+ +H + +H + + IL+ + D + G + D
Sbjct: 114 -WKLEVAKQLAAA-----MHFLEENTLIHGNVCAKNILLIREEDRKT---GNPPFIKLSD 164
Query: 455 PNDS-SFVHGDLGE--FGYVAPE-YSSTMVASLKGDVYGFGIVLLELLS-GQKPLDVAGA 509
P S + + D+ + +V PE + +L D + FG L E+ S G KPL +
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS 224
Query: 510 EEGFK 514
+ +
Sbjct: 225 QRKLQ 229
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + ++ Y APE M
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMEPEVVTRYYRAPEVILGMGY 202
Query: 482 SLKGDVYGFGIVLLELL 498
D++ G ++ E++
Sbjct: 203 KENVDLWSVGCIMGEMV 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 422 MHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVA 481
+H+ + + I++ D +I DFGLAR G+ S + + Y APE M
Sbjct: 150 IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-----SFMMVPFVVTRYYRAPEVILGMGY 204
Query: 482 SLKGDVYGFGIVLLELLSG 500
D++ G ++ E++ G
Sbjct: 205 KENVDIWSVGCIMGEMIKG 223
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 428 SNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
SN++ +D+ + RI DFG A+ + + ++ + +VAPE
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ GI+L +L+G P
Sbjct: 206 CDIWSLGILLYTMLAGYTPF 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 23/170 (13%)
Query: 340 EMNRLGQLRHPNLVPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTR 399
E+ L QL HPN++ L F + LV + G L+ + L
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI-------ILRQKFSEVDA 123
Query: 400 LRIGMGASRGLAWLHHGCQPPYMHQYIS-SNVILIDDDFDA--RITDFGLARL--VGSRD 454
I G +LH + +H+ + N++L DA +I DFGL+ VG +
Sbjct: 124 AVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK- 179
Query: 455 PNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ LG Y+APE K DV+ G++L LL G P
Sbjct: 180 ------MKERLGTAYYIAPEVLRKKYDE-KCDVWSCGVILYILLCGYPPF 222
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 23/195 (11%)
Query: 323 AIKRLSACKLSEK-----QFRSEMNRLGQLRHPNLVPLLGFCVVEEERL-LVYKHMPNGT 376
A+K L + +K R+E L +R + L + E +L L+ ++ G
Sbjct: 86 AMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGE 145
Query: 377 LYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYISSNVILIDDD 436
L++ L + T + + + L H + +++ I IL+D +
Sbjct: 146 LFTHLSQR----------ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195
Query: 437 FDARITDFGLAR-LVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDV--YGFGIV 493
+TDFGL++ V F G Y+AP+ + V + G++
Sbjct: 196 GHVVLTDFGLSKEFVADETERAYDFC----GTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251
Query: 494 LLELLSGQKPLDVAG 508
+ ELL+G P V G
Sbjct: 252 MYELLTGASPFTVDG 266
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 428 SNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
SN++ +D+ + RI DFG A+ + + ++ + +VAPE
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ GI+L +L+G P
Sbjct: 206 CDIWSLGILLYTMLAGYTPF 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 23/212 (10%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG + + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
V L +V +++P G ++S L G + ++ ++ + L
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL 162
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
++ +P +LID ++TDFG A+ V R G Y+A
Sbjct: 163 IYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYLA 206
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
PE + + D + G+++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 23/212 (10%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG + + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
V L +V +++P G ++S L G + ++ ++ + L
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL 162
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
++ +P +LID ++TDFG A+ V R G Y+A
Sbjct: 163 IYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYLA 206
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
PE + + D + G+++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 23/212 (10%)
Query: 293 ATNSFAVENIIISTRTGVSYKAVLPDASALAIKRLSACKLSEKQFRSEMNRLGQLRHPNL 352
T SF ++ TG + + D + + L+EK+ +N P L
Sbjct: 50 GTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN------FPFL 103
Query: 353 VPLLGFCVVEEERLLVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAW 412
V L +V +++P G ++S L G + ++ ++ + L
Sbjct: 104 VKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL 162
Query: 413 LHHGCQPPYMHQYISSNVILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVA 472
++ +P +LID ++TDFG A+ V R G Y+A
Sbjct: 163 IYRDLKP---------ENLLIDQQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYLA 206
Query: 473 PEYSSTMVASLKGDVYGFGIVLLELLSGQKPL 504
PE + + D + G+++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 431 ILIDDDFDARITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLKGDVYGF 490
+LID+ ++TDFG A+ V R G Y+APE + + D +
Sbjct: 159 LLIDEQGYIQVTDFGFAKRVKGR-------TWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 491 GIVLLELLSGQKPL 504
G+++ E+ +G P
Sbjct: 212 GVLIYEMAAGYPPF 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 428 SNVILIDDDFDA---RITDFGLARLVGSRDPNDSSFVHGDLGEFGYVAPEYSSTMVASLK 484
SN++ +D+ + RI DFG A+ + + ++ + +VAPE
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRA----ENGLLXTPCYTANFVAPEVLERQGYDAA 200
Query: 485 GDVYGFGIVLLELLSGQKPL 504
D++ G++L L+G P
Sbjct: 201 CDIWSLGVLLYTXLTGYTPF 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 367 LVYKHMPNGTLYSLLHGNGVDNTLSGVLDWSTRLRIGMGASRGLAWLHHGCQPPYMHQYI 426
LV++ M G++ S +H N L + + + L +LH+ H+ +
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLHNK---GIAHRDL 137
Query: 427 SSNVILIDDDFD---ARITDFGLA---RLVGSRDPNDSSFVHGDLGEFGYVAPEY----- 475
IL + +I DF L +L G P + + G Y+APE
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 476 SSTMVASLKGDVYGFGIVLLELLSGQKPL 504
+ + D++ G++L LLSG P
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPF 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,888,934
Number of Sequences: 62578
Number of extensions: 672569
Number of successful extensions: 3268
Number of sequences better than 100.0: 881
Number of HSP's better than 100.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 614
Number of HSP's that attempted gapping in prelim test: 2041
Number of HSP's gapped (non-prelim): 940
length of query: 604
length of database: 14,973,337
effective HSP length: 104
effective length of query: 500
effective length of database: 8,465,225
effective search space: 4232612500
effective search space used: 4232612500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)