Your job contains 1 sequence.
>007424
MAHALKTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTLLPTFLSCILSTNSSDKPGVR
KECIHVIATLSNSHNLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAFVT
MLKLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGKLGRMEVRLERLLKSEVFKAKA
AGLVVVGSVIGSGAVDGSGLKGLVSCLLGFLSSQDWAARKAAAEALWRLAVVEKDAVPEF
KGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPSKEDGSDRRYL
TESRSSSTKGLELKKRSILASKSTPPDSSFPTTARKRGFLKKVSPAVLHKVDQKKPSDWR
DQISAPSGASLVDAHEDGTVLKIRNNENTKLPKPETKRALFNWSSDDKVHKLRSGSRVTP
YNEESHEFTVSDNTENLHIKHKDCEDLSTIRNQLVQIEQQQSSLLDLLQRFIGRSESGMQ
SLETRVLGLELALDEISYDLAVSTGRMTKTNSHGATCCILPGADFLSSKFWRKTEGRYSP
SKFSTSSGTSSLTAMNYGTNKDRYAEKLKLENRRSRFQSSGGFIVNPLAEIHPRSRGISE
AAHQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007424
(604 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154144 - symbol:AT5G62580 species:3702 "Arabi... 963 6.6e-97 1
TAIR|locus:2205739 - symbol:AT1G27210 species:3702 "Arabi... 685 1.9e-67 1
TAIR|locus:2025906 - symbol:AT1G59850 "AT1G59850" species... 431 1.6e-40 1
TAIR|locus:2060161 - symbol:AT2G07170 species:3702 "Arabi... 329 4.0e-28 2
TAIR|locus:2136467 - symbol:TOR1 "TORTIFOLIA 1" species:3... 301 1.5e-23 1
TAIR|locus:2036411 - symbol:AT1G50890 "AT1G50890" species... 238 1.4e-16 1
>TAIR|locus:2154144 [details] [associations]
symbol:AT5G62580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BT010752 IPI:IPI00527330 RefSeq:NP_201064.2
UniGene:At.19834 ProteinModelPortal:Q6NPR6 SMR:Q6NPR6
EnsemblPlants:AT5G62580.1 GeneID:836379 KEGG:ath:AT5G62580
TAIR:At5g62580 eggNOG:NOG328306 HOGENOM:HOG000241771
InParanoid:Q6NPR6 OMA:GKSENGM PhylomeDB:Q6NPR6
ProtClustDB:CLSN2693175 Genevestigator:Q6NPR6 Uniprot:Q6NPR6
Length = 615
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 234/555 (42%), Positives = 316/555 (56%)
Query: 6 KTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTL----LPTFLSCILSTNSSDKPGVRK 61
K +++ LL KL DRDT++ AA+ELD +A +DP+ L +F+S ILS ++ DKP VRK
Sbjct: 7 KQNMSVLLTKLGDRDTFTMAARELDLMARQIDPSSSSGNLQSFISVILSVDTGDKPAVRK 66
Query: 62 ECIHVIATLSNS---HNLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAF 118
CIH++A LS S ++LSP+++KI+ ITR RD +S++++TC++ VS++S R F
Sbjct: 67 HCIHLLAVLSVSLPLNSLSPFLSKILTRITRRLRDPDSSIRSTCVAAVSAISSRTTKPPF 126
Query: 119 VT-MLKLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEV-RLERLLKSEVF 176
+ +K L+D LFTEQ+ NAQ+G DPD +LG+ + RLE+L+K F
Sbjct: 127 YSAFMKPLADTLFTEQEVNAQIGAALCLAAAIDSASDPDPVRLGQTLLPRLEKLVKCNAF 186
Query: 177 KAKXXX-----XXXXXXXXXXXXXXXXXLKGLVSCLLGFLSSQDXXXXXXXXXXXXXXXX 231
KAK LKGLV CLL FL S+D
Sbjct: 187 KAKSAGVVVIGSVIGAGGLSGTSVSSGGLKGLVDCLLSFLVSEDWAARKAAAEALGRLAT 246
Query: 232 XXKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPSK 291
++ + EFK KCLKIFES+++DKVK VREVMN+M+EAWKQVPDLSEE SPP +S SK
Sbjct: 247 MERNELGEFKAKCLKIFESRKYDKVKAVREVMNQMMEAWKQVPDLSEEVSPP-RSNASSK 305
Query: 292 EDGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSSFPTTARKRGFLKKVSP------ 345
D SD RY + SR ST K R+ L ++STPP SS TTARK+ K +
Sbjct: 306 GDASDGRYPSGSRVGSTPA---KSRTHLVNRSTPPGSSLATTARKQANRKSIDQKKTSLT 362
Query: 346 AVLHKVDQKKPSDWR-DQISAPSGASLVDA-HEDGTVLKIRNNENTKLPKPETKRALFNW 403
A L K + ++ +W+ S P+G SL D H D N + T T + L
Sbjct: 363 ASLTKPNVRRRLEWKAGGASIPTGVSLEDEQHCDHD----ENAKETSHSSHNTVQKLGGV 418
Query: 404 SSDDKVHKLRSGSRVTPYNEESHEFTVSDNTENLHIKHKDCEDLSTIRNQLVQIEXXXXX 463
SS + SG+ + + H + + N+ N K ED+S IRNQLVQIE
Sbjct: 419 SSSLNGNIPPSGATMVTGH---HVLSENPNSNNC----KGLEDISLIRNQLVQIEQQQAN 471
Query: 464 XXXXXXRFIGRSESGMQSLETRVLGLELALDEISYDLAVSTGRMTKTNSHGATCCILPGA 523
RF+G S+ GM+ LETRV GLELALDEISYDLAVS GRM+ +S CC+LP
Sbjct: 472 LMDLLQRFVGSSQHGMRGLETRVHGLELALDEISYDLAVSNGRMSNGSSRN-NCCLLPSG 530
Query: 524 DFLSSKFWRKTEGRY 538
F+ SKFW+K + +Y
Sbjct: 531 SFIKSKFWKKHDSKY 545
Score = 341 (125.1 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 76/152 (50%), Positives = 92/152 (60%)
Query: 442 KDCEDLSTIRNQLVQIEXXXXXXXXXXXRFIGRSESGMQSLETRVLGLELALDEISYDLA 501
K ED+S IRNQLVQIE RF+G S+ GM+ LETRV GLELALDEISYDLA
Sbjct: 450 KGLEDISLIRNQLVQIEQQQANLMDLLQRFVGSSQHGMRGLETRVHGLELALDEISYDLA 509
Query: 502 VSTGRMTKTNSHGATCCILPGADFLSSKFWRKTEGRYXXXXXXXXXXXXXXXAMNYGTNK 561
VS GRM+ +S CC+LP F+ SKFW+K + +Y A T +
Sbjct: 510 VSNGRMSNGSSRN-NCCLLPSGSFIKSKFWKKHDSKYS--------------ASRMSTYR 554
Query: 562 DRYAEKLKLENRRSRFQSSGGFIVNPLAEIHP 593
+R AE +++N R RF S GFIVNPLAEI P
Sbjct: 555 NRNAETTEIQNSRHRFNGSPGFIVNPLAEIRP 586
>TAIR|locus:2205739 [details] [associations]
symbol:AT1G27210 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR016024
EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 ProtClustDB:CLSN2693175
EMBL:AY057540 EMBL:AY140087 EMBL:BT008391 IPI:IPI00535229
RefSeq:NP_564273.1 UniGene:At.26316 ProteinModelPortal:Q93ZH1
SMR:Q93ZH1 IntAct:Q93ZH1 PRIDE:Q93ZH1 EnsemblPlants:AT1G27210.1
GeneID:839610 KEGG:ath:AT1G27210 TAIR:At1g27210 InParanoid:Q93ZH1
OMA:IKHTISE PhylomeDB:Q93ZH1 ArrayExpress:Q93ZH1
Genevestigator:Q93ZH1 Uniprot:Q93ZH1
Length = 625
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 184/544 (33%), Positives = 274/544 (50%)
Query: 5 LKTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTLLPTFLSCILSTNSSDKPGVRKECI 64
LK V LNKL+DRDT + A+ ELDSIA + FL+CI +T+SS K VRK+C+
Sbjct: 35 LKQRVIACLNKLADRDTLALASAELDSIARNLTHDSFSPFLNCIHNTDSSVKSPVRKQCV 94
Query: 65 HVIATLSNSH--NLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAFVTML 122
+++ LS H +L+P++ K+++++ R RD +S++++ C + +S V F ++
Sbjct: 95 ALLSVLSRYHGDSLTPHLAKMVSTVIRRLRDPDSSVRSACAVATADMSAHVTRQPFASVA 154
Query: 123 KLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEVRLERLLKSEVFKAKXXX 182
K L + L E D+N Q+G DP++ +L + ++ +LLKS+ FKAK
Sbjct: 155 KPLIETLIQEGDSNLQIGAALCLAASVDAATDPESEQLRKSLPKIGKLLKSDGFKAKAAL 214
Query: 183 XXXXXXXXXXXXXXXX-XLKGLVSCLLGFLSSQDXXXXXXXXXXXXXXXXXXKDAVPEFK 241
L LV L+ FLSS+D +D ++K
Sbjct: 215 LSAVGSIITAGGAGTKPVLDWLVPVLIEFLSSEDWAARKSAAEALGKVATA-EDLASQYK 273
Query: 242 GKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPSKEDGSDRRYLT 301
C ES+RFDKVK VRE MN+ + WK+V +EAS P S +DG+ + +
Sbjct: 274 KTCTTALESRRFDKVKSVRETMNRALNLWKEV-STDDEASLSPSR--SSTDDGNIGCFSS 330
Query: 302 ESRSSSTK-GLEL----KKRSILA-SKSTPPDSSFPTTARKRGFLKKVSPAVLHKVDQKK 355
+RSS+ GL+ K I+ S S P + S+ T +K K+ + V++
Sbjct: 331 VTRSSTIDVGLKSARPKKVTPIMKRSPSLPVNRSYAATRQKENLPKRNQGNMTMLVEEAS 390
Query: 356 PSDWRDQISAPSGASLVDAHEDGTVLKIRNNENTKLPKPETKRALFNWSSDDKVHKLRSG 415
D + P S + E N+ + K S LRSG
Sbjct: 391 SVDNKGPHFTPVKKSSEETEEKA------NSGGPDIIKHTISEKSREDSKVSSFGGLRSG 444
Query: 416 SRVTPYNEESHEFTVSDNTENLHIKHKDCEDLSTIRNQLVQIEXXXXXXXXXXXRFIGRS 475
SRV P +++ +V + +++ KD E+LS IR QL IE +F+G S
Sbjct: 445 SRVAPCSDDGD--SVKNCKDDVEESKKDSEELSLIREQLALIENQQSSLLDLLQKFMGTS 502
Query: 476 ESGMQSLETRVLGLELALDEISYDLAVSTGRMTKTNSH--GATCCILPGADFLSSKFWRK 533
+SG+QSLE+RV GLE+ALDEIS DLAVS GR+ + +S G +C LPG +FLS KFWRK
Sbjct: 503 QSGIQSLESRVSGLEMALDEISCDLAVSNGRVPRNSSGCAGDSCSKLPGTEFLSPKFWRK 562
Query: 534 TEGR 537
TE R
Sbjct: 563 TEER 566
>TAIR|locus:2025906 [details] [associations]
symbol:AT1G59850 "AT1G59850" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC007258 InterPro:IPR026003 Pfam:PF12765
HOGENOM:HOG000241771 ProtClustDB:CLSN2693175 IPI:IPI00540405
PIR:F96622 RefSeq:NP_176194.1 UniGene:At.66816
ProteinModelPortal:Q9XIE4 SMR:Q9XIE4 EnsemblPlants:AT1G59850.1
GeneID:842279 KEGG:ath:AT1G59850 TAIR:At1g59850 eggNOG:NOG244611
InParanoid:Q9XIE4 OMA:IRSSPSH PhylomeDB:Q9XIE4
Genevestigator:Q9XIE4 Uniprot:Q9XIE4
Length = 498
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 105/325 (32%), Positives = 164/325 (50%)
Query: 5 LKTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTLLPTFLSCILSTNSSDKPGVRKECI 64
LK V LN+LSDRDT + AA ELDSIA + P F++C+ ST+SS K VRK C+
Sbjct: 22 LKQRVIACLNRLSDRDTLALAAAELDSIALNLSPETFSLFINCLQSTDSSAKSPVRKHCV 81
Query: 65 HVIATLSNSH--NLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAFVTML 122
+++ LS SH +L+P+++K+++++ R RD +S+++A C++ ++ + F +
Sbjct: 82 SLLSVLSRSHGDSLAPHLSKMVSTVLRRLRDPDSSVRAACVAASVDMTTNITGQPFSILF 141
Query: 123 KLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEVRLERLLKSEVFKAKXXX 182
+ + + + D NAQ+ +PD +L + ++ +LLKSE FKAK
Sbjct: 142 GPMIETVIHDCDPNAQISAAMCLAAAVDAADEPDVEQLQKALPKIGKLLKSEGFKAKAEL 201
Query: 183 XXXXXXXXXXXXXXXXXLKGLVSCLLG----FLSSQDXXXXXXXXXXXXXXXXXXKDAVP 238
K ++ LL FLSS D ++ P
Sbjct: 202 LGAIGTVIGAVGGRNSE-KAVLDWLLPNVSEFLSSDDWRARKAAAEAMARVAMVEEELAP 260
Query: 239 EFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPSKEDGSDRR 298
+K CL I ES+RFDKVK+VRE MN+ + WKQ+ S E S +S SK S
Sbjct: 261 LYKKTCLGILESRRFDKVKLVRETMNRTLGLWKQLEGDSTEVS---ESSSSSKSASSGLS 317
Query: 299 YLTESRSSSTKGLELKKRSILASKS 323
+ RS++ KG + + L+SKS
Sbjct: 318 ATSGKRSNTLKGKDRNLNTPLSSKS 342
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 74/263 (28%), Positives = 112/263 (42%)
Query: 268 EAWKQVPDLSEEASP--PPQSLDPSKEDGSDRRYLTESRSSSTKGL--ELKKRSILASKS 323
EA +V + EE +P L + D+ L + T GL +L+ S S+S
Sbjct: 246 EAMARVAMVEEELAPLYKKTCLGILESRRFDKVKLVRETMNRTLGLWKQLEGDSTEVSES 305
Query: 324 TPPDSS----FPTTARKRGFLKKVSPAVLHKVDQKKPSDWRDQISAPSGASLVDAHEDGT 379
+ S T+ KR K L+ K +D G + D ++
Sbjct: 306 SSSSKSASSGLSATSGKRSNTLKGKDRNLNTPLSSKSNDVEP---LDRGDTPKDVEQEAV 362
Query: 380 VLKIRNNENTKLPKPETKRALFNWSSDDKVHKLRSG----SRVTPYNEESHEFTVSDNTE 435
V K + N +T KR LF K+HK++ S+V ++E T S ++
Sbjct: 363 VSKEKRNRSTL----GAKRVLF----PAKMHKVKENGSNKSQVVQSSDEESPKTDSGSSS 414
Query: 436 NLHIKHKDCEDLSTIRNQLVQIEXXXXXXXXXXXRFIGRSESGMQSLETRVLGLELALDE 495
+ K + E+LS IR+Q+ QIE +F+ S +GMQSLE RV GLE +
Sbjct: 415 SSQAK-SNAEELSLIRHQITQIEKQQSSLLDLFQKFMESSHNGMQSLERRVRGLETSFSV 473
Query: 496 ISYDLAVSTGRMTKTNSHGATCC 518
IS DL VS +T+ +H C
Sbjct: 474 ISTDLLVSRS-ITQNGNHKRNAC 495
>TAIR|locus:2060161 [details] [associations]
symbol:AT2G07170 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007017 "microtubule-based
process" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0031048 "chromatin silencing by small RNA" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] InterPro:IPR000357 InterPro:IPR016024
Pfam:PF02985 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 IPI:IPI00530465 RefSeq:NP_178730.2
UniGene:At.41010 ProteinModelPortal:F4IK92 SMR:F4IK92 PRIDE:F4IK92
EnsemblPlants:AT2G07170.1 GeneID:815286 KEGG:ath:AT2G07170
OMA:SAVRKEC Uniprot:F4IK92
Length = 820
Score = 329 (120.9 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 109/406 (26%), Positives = 174/406 (42%)
Query: 5 LKTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTLLPTFLSCILSTNSSDKPGVRKECI 64
LK V LNKL+DRDTY + EL+ + P + FLSCIL T+S K VRKECI
Sbjct: 27 LKKKVVIALNKLADRDTYQRGVDELEKTVEHLAPDKVSCFLSCILDTDSEQKSAVRKECI 86
Query: 65 HVIATLSNSHN--LSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGA------S 116
++ TL+ H + PY+ K+++SI + +D +S ++ CI T+ L+ ++
Sbjct: 87 RLMGTLARFHEGLVGPYLGKMVSSIVKRLKDPDSVVRDACIETMGVLASKMSCYEDQNFG 146
Query: 117 AFVTMLKLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEVRLERLLKSEVF 176
FV+++K L +A+ +Q+ Q G + + RM +R +LL + F
Sbjct: 147 VFVSLVKPLFEAI-GDQNKYVQSGAALCLARVIDSSPEAPVAIIQRMLMRTVKLLNNSHF 205
Query: 177 KAK-XXXXXXXXXXXXXXXXXXXXLKGLVSCLLGFLSSQDXXXXXXXXXXXXXXXXXXKD 235
AK L +S L ++D +
Sbjct: 206 IAKPAVIELNRSIILAGGATSKSVLSSAMSSFQDALKNKDWTTRKAASVALMEIAATGEK 265
Query: 236 AVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPS-KEDG 294
+ K C+ ES RFDKVK VR+ + ++ WK VP S+ SP P + S KE
Sbjct: 266 FLGPLKASCICSLESCRFDKVKPVRDSVILALKYWKGVPG-SD--SPEPSETESSVKESY 322
Query: 295 SDRRYLTESRSSSTKGLELKKRSILASKSTPPDSSFPTTARKRGFLKKVSPAVLHKVDQK 354
+ R S ST ++K + + P +AR+ P + D +
Sbjct: 323 NGAR--ESSELFSTSDFKVKDGMSIKYVTDVTRKKVPVSARQ--------PPTRYNDDPR 372
Query: 355 KPS--DWRDQISAPSGA--SLVDAHED---GTVLKIRNNENTKLPK 393
K + DW +I+ P + S VD + + G+ + E T P+
Sbjct: 373 KSNQDDWHIEIAVPESSFVSKVDLYNEESEGSCITKTFAETTNTPE 418
Score = 56 (24.8 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 429 TVSDNTENLHIKHKDCEDLSTIRNQLVQIEXXXXXXXXXXXRFIGRSESGMQSLETRVLG 488
TVS + N K +++++R QL IE F + L+++V
Sbjct: 496 TVSSSQINHDCCAKIANEMASVRKQLSDIENKQSRLIDQLQVFSTGIMNNFSVLQSKVSS 555
Query: 489 LELALDEISYDLA----VSTGRMTKTNSHGAT 516
LE A++ I+ + A +S K N G+T
Sbjct: 556 LEYAVEGIAQNAALHSDISNSNFVKHNQ-GST 586
>TAIR|locus:2136467 [details] [associations]
symbol:TOR1 "TORTIFOLIA 1" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0010031
"circumnutation" evidence=IMP] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0010005 "cortical microtubule, transverse to long
axis" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR016024 GO:GO:0007275 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 EMBL:AL035680 EMBL:AL161566
GO:GO:0009826 GO:GO:0008017 GO:GO:0010031 GO:GO:0010005
EMBL:AB176521 EMBL:AJ249836 EMBL:BT006451 IPI:IPI00530987
PIR:T06036 RefSeq:NP_194436.2 UniGene:At.32124
ProteinModelPortal:Q9T041 SMR:Q9T041 IntAct:Q9T041 STRING:Q9T041
PaxDb:Q9T041 PRIDE:Q9T041 EnsemblPlants:AT4G27060.1 GeneID:828814
KEGG:ath:AT4G27060 TAIR:At4g27060 eggNOG:NOG291487
HOGENOM:HOG000029994 InParanoid:Q9T041 OMA:GGSHDSM PhylomeDB:Q9T041
ProtClustDB:CLSN2680449 Genevestigator:Q9T041 GermOnline:AT4G27060
Uniprot:Q9T041
Length = 864
Score = 301 (111.0 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 91/366 (24%), Positives = 159/366 (43%)
Query: 5 LKTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTLLPTFLSCILSTNSSDKPGVRKECI 64
LK + ++KL+DRDTY A ++L+ ++ P LP FL+C+ + S KP V+KEC+
Sbjct: 42 LKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKECL 101
Query: 65 HVIATLSNSH--NLSPYITKIINSITRNFRDKNSALQATCISTVSSLS----------PR 112
H+++ + + H + + ++TKII I + +D +S ++ C T+ +LS
Sbjct: 102 HLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGTN 161
Query: 113 VGASAFVTML--KLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEVRLERL 170
G+++ L K L +A+ EQ+ Q G P ++ R+ +L
Sbjct: 162 TGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICKL 220
Query: 171 LKSEVFKAKXXXXXXXXXXXXXXXXXXXXLKGLVSCLLGFLSSQDXXXXXXXXXXXXXXX 230
L + F AK L+ L+ + L S D
Sbjct: 221 LSNSSFLAKASLLPVVSSLSQVGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTALA 280
Query: 231 XXXKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPS 290
+ E + + E+ RFDK+K VRE + + ++ WK++ + + L S
Sbjct: 281 SHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISGKYVDGASDDSKLSAS 340
Query: 291 KEDGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSS------FPTTARKRGFLKKVS 344
++ GS++ E RS+ +L K+ + PDS+ FP A G LKK +
Sbjct: 341 EQLGSEKN--GEKRSNLA---DLMKKEASDGSTLSPDSASKGKGCFPEKAV--GLLKKKA 393
Query: 345 PAVLHK 350
P + K
Sbjct: 394 PVLSDK 399
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 99/434 (22%), Positives = 166/434 (38%)
Query: 92 RDKNSALQATCISTVSSLSPRVGASAFVTM-LKLLSDALFTEQDTNAQVGXXXXXXXXXX 150
RD AL + + AS V + +K L +A+ EQ+ Q G
Sbjct: 142 RDTIGALSGIYLKGKEEGTNTGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVE 200
Query: 151 XXQDPDAGKLGRMEVRLERLLKSEVFKAKXXXXXXXXXXXXXXXXXXXXLKGLVSCLLGF 210
P ++ R+ +LL + F AK L+ L+ +
Sbjct: 201 SAASPPVTSFQKLCPRICKLLSNSSFLAKASLLPVVSSLSQVGAIAPQSLESLLESIHDC 260
Query: 211 LSSQDXXXXXXXXXXXXXXXXXXKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAW 270
L S D + E + + E+ RFDK+K VRE + + ++ W
Sbjct: 261 LGSTDWVTRKAAAETLTALASHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLW 320
Query: 271 KQVPDLSEEASPPPQSLDPSKEDGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSS- 329
K++ + + L S++ GS++ E RS+ +L K+ + PDS+
Sbjct: 321 KKISGKYVDGASDDSKLSASEQLGSEKN--GEKRSNLA---DLMKKEASDGSTLSPDSAS 375
Query: 330 -----FPTTARKRGFLKKVSPAVLHK-----VDQKKPSDWRDQISAPSGASLVDAHEDGT 379
FP A G LKK +P + K Q+ ++ P D E G
Sbjct: 376 KGKGCFPEKAV--GLLKKKAPVLSDKDFNPEFFQRLERRQSVEVVVPRRCKNNDEEESGL 433
Query: 380 V-LKIRNNENT-KLPKPETKRALFNWSSDDKVHKLRSGSRVTPYN-EES--HEFTVSDNT 434
L + N K + + K+ + + + + N +E+ H VS NT
Sbjct: 434 DDLNAMGSSNRLKNTQADDKQVKGRFDGNGSQARTSGDDKAGVVNGKETPGHHAPVS-NT 492
Query: 435 ENLHIKH--KDCEDLSTIRNQLVQIEXXXXXXXXXXXRFIGRSESGMQSLETRVLGLELA 492
+N + + S I+ QL+Q+E FIG S M +LE RV GLE
Sbjct: 493 DNQSEGSFTSNRGNWSAIQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERI 552
Query: 493 LDEISYDLAVSTGR 506
+++++ DL++S+GR
Sbjct: 553 VEDMARDLSISSGR 566
>TAIR|locus:2036411 [details] [associations]
symbol:AT1G50890 "AT1G50890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR016024 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005874
EMBL:AC079284 HOGENOM:HOG000029994 IPI:IPI00521044 PIR:H96545
RefSeq:NP_175502.2 UniGene:At.37931 ProteinModelPortal:F4I6M4
PRIDE:F4I6M4 EnsemblPlants:AT1G50890.1 GeneID:841511
KEGG:ath:AT1G50890 TAIR:At1g50890 eggNOG:NOG272349
InParanoid:Q9C6J1 OMA:MISLENR Uniprot:F4I6M4
Length = 821
Score = 238 (88.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 88/382 (23%), Positives = 155/382 (40%)
Query: 5 LKTSVNGLLNKLSDRDTYSQAAKELDSIAATV--DPTLLPTFLSCILSTNSSDKPGVRKE 62
LK + L++L DRDTY A +L+ I +V P +LP L C+ ++S K V++E
Sbjct: 37 LKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPVKRE 96
Query: 63 CIHVIATLSNSH-NLS-PYITKIINSITRNFRDKNSALQATCISTVSSLSPR-------- 112
I +++ L S+ +LS + KII+ I + +D ++ ++ C + SLS +
Sbjct: 97 SIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEKEVE 156
Query: 113 ----VGASAFVTMLKLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEVRLE 168
VG+S K L +A+ EQ+ + Q G +P ++ R+
Sbjct: 157 NGNYVGSSLVGLFAKPLFEAM-AEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRIS 215
Query: 169 RLLKSEVFKAKXXXXXXXXXXXXXXXXXXXXLKGLVSCLLGFLSSQDXXXXXXXXXXXXX 228
+LL S + K L+ L+ + L +
Sbjct: 216 KLLNSPNYITKASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVLIS 275
Query: 229 XXXXXKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLD 288
V + L E+ RFDK+K VRE +++ + WK + E + Q
Sbjct: 276 LAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGESGTMDDQKDV 335
Query: 289 PSKEDGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSSFPTTARKRGFL---KKVSP 345
S++ +R T+S S GL ++ S S+ S RK+ K ++P
Sbjct: 336 SSEQCILERNGETDSVSCEEAGLVMQGSCDGLSSSSDSISKAVLILRKKAPRLTGKDLNP 395
Query: 346 AVLHKVDQKKPSDWRDQISAPS 367
K++++ D ++ PS
Sbjct: 396 EFFQKLEKRGSGDMPVEVILPS 417
Score = 202 (76.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 90/413 (21%), Positives = 162/413 (39%)
Query: 113 VGASAFVTMLKLLSDALFTEQDTNAQVGXXXXXXXXXXXXQDPDAGKLGRMEVRLERLLK 172
VG+S K L +A+ EQ+ + Q G +P ++ R+ +LL
Sbjct: 161 VGSSLVGLFAKPLFEAM-AEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRISKLLN 219
Query: 173 SEVFKAKXXXXXXXXXXXXXXXXXXXXLKGLVSCLLGFLSSQDXXXXXXXXXXXXXXXXX 232
S + K L+ L+ + L +
Sbjct: 220 SPNYITKASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVLISLAVH 279
Query: 233 XKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPSKE 292
V + L E+ RFDK+K VRE +++ + WK + E + Q S++
Sbjct: 280 SSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGESGTMDDQKDVSSEQ 339
Query: 293 DGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSSFPTTARKRGFL---KKVSPAVLH 349
+R T+S S GL ++ S S+ S RK+ K ++P
Sbjct: 340 CILERNGETDSVSCEEAGLVMQGSCDGLSSSSDSISKAVLILRKKAPRLTGKDLNPEFFQ 399
Query: 350 KVDQKKPSDWRDQISAPS------GASLVDAHEDGT-VLKIRNNENTKLPKPETKRALFN 402
K++++ D ++ PS ++ D + T VL+ R+N + TK+ F
Sbjct: 400 KLEKRGSGDMPVEVILPSRQKNSSNSNTEDESDANTSVLRSRSNGLCRTAGVHTKQRHFG 459
Query: 403 WSSDDK-VHKLRSG--SRVTPYNEESHEFTVSDNTENLHIKHKDCEDLSTIRNQLVQIEX 459
+ +K V + +G SR+ ++ + E +D +EN + ++ QL+ +E
Sbjct: 460 DFAREKWVDERMNGGESRLRAFDGDHTEVIQADTSENRG-------NWPPLQRQLLHLER 512
Query: 460 XXXXXXXXXXRFIGRSESGMQSLETRVLGLELALDEISYDLAVSTGRMTKTNS 512
F+G S GM SLE RV GLE ++E+S ++++ +G K +
Sbjct: 513 QQTHIMNMLQDFMGGSHDGMISLENRVRGLERIVEEMSREMSIQSGARGKATA 565
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 604 528 0.00091 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 615 (65 KB)
Total size of DFA: 281 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 49.22u 0.18s 49.40t Elapsed: 00:00:02
Total cpu time: 49.22u 0.18s 49.40t Elapsed: 00:00:02
Start: Tue May 21 04:14:34 2013 End: Tue May 21 04:14:36 2013