BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007424
         (604 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|F4I6M4|SP2L_ARATH Microtubule-associated protein SPIRAL2-like OS=Arabidopsis thaliana
           GN=SP2L PE=2 SV=1
          Length = 821

 Score =  182 bits (462), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 265/530 (50%), Gaps = 37/530 (6%)

Query: 5   LKTSVNGLLNKLSDRDTYSQAAKELDSIAATV--DPTLLPTFLSCILSTNSSDKPGVRKE 62
           LK  +   L++L DRDTY  A  +L+ I  +V   P +LP  L C+  ++S  K  V++E
Sbjct: 37  LKQRILTSLSRLGDRDTYQIAVDDLEKIVVSVPDSPEILPVLLHCLFDSSSDLKAPVKRE 96

Query: 63  CIHVIATLSNSH-NLS-PYITKIINSITRNFRDKNSALQATCISTVSSLSPR-------- 112
            I +++ L  S+ +LS   + KII+ I +  +D ++ ++  C   + SLS +        
Sbjct: 97  SIRLLSFLCLSYTDLSFSQLAKIISHIVKRLKDADNGVRDACRDAIGSLSAQFLKEKEVE 156

Query: 113 ----VGASAFVTMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGKLGRMEVRLE 168
               VG+S      K L +A+  EQ+ + Q GAA+C+   ID+A +P      ++  R+ 
Sbjct: 157 NGNYVGSSLVGLFAKPLFEAM-AEQNKSLQSGAAICMGKMIDSATEPPVAAFQKLCPRIS 215

Query: 169 RLLKSEVFKAKAAGLVVVGSVIGSGAVDGSGLKGLVSCLLGFLSSQDWAARKAAAEALWR 228
           +LL S  +  KA+ L VVGS+   GA+    L+ L+  +   L   +W  RKAAA+ L  
Sbjct: 216 KLLNSPNYITKASLLPVVGSLSQVGAIAPQSLESLLHSIHECLGCTNWVTRKAAADVLIS 275

Query: 229 LAVVEKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLD 288
           LAV     V +     L   E+ RFDK+K VRE +++ +  WK +    E  +   Q   
Sbjct: 276 LAVHSSSLVADKTDSTLTALEACRFDKIKPVRESLSEALNVWKNIAGKGESGTMDDQKDV 335

Query: 289 PSKEDGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSSFPTTARKRG---FLKKVSP 345
            S++   +R   T+S S    GL ++      S S+   S      RK+      K ++P
Sbjct: 336 SSEQCILERNGETDSVSCEEAGLVMQGSCDGLSSSSDSISKAVLILRKKAPRLTGKDLNP 395

Query: 346 AVLHKVDQKKPSDWRDQISAP------SGASLVDAHEDGT-VLKIRNNENTKLPKPETKR 398
               K++++   D   ++  P      S ++  D  +  T VL+ R+N   +     TK+
Sbjct: 396 EFFQKLEKRGSGDMPVEVILPSRQKNSSNSNTEDESDANTSVLRSRSNGLCRTAGVHTKQ 455

Query: 399 ALF-NWSSDDKVHKLRSG--SRVTPYNEESHEFTVSDNTENLHIKHKDCEDLSTIRNQLV 455
             F +++ +  V +  +G  SR+  ++ +  E   +D +EN         +   ++ QL+
Sbjct: 456 RHFGDFAREKWVDERMNGGESRLRAFDGDHTEVIQADTSENRG-------NWPPLQRQLL 508

Query: 456 QIEQQQSSLLDLLQRFIGRSESGMQSLETRVLGLELALDEISYDLAVSTG 505
            +E+QQ+ ++++LQ F+G S  GM SLE RV GLE  ++E+S ++++ +G
Sbjct: 509 HLERQQTHIMNMLQDFMGGSHDGMISLENRVRGLERIVEEMSREMSIQSG 558


>sp|Q9T041|MAPT_ARATH Microtubule-associated protein TORTIFOLIA1 OS=Arabidopsis thaliana
           GN=TOR1 PE=1 SV=2
          Length = 864

 Score =  180 bits (457), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/543 (29%), Positives = 267/543 (49%), Gaps = 59/543 (10%)

Query: 5   LKTSVNGLLNKLSDRDTYSQAAKELDSIAATVDPTLLPTFLSCILSTNSSDKPGVRKECI 64
           LK  +   ++KL+DRDTY  A ++L+    ++ P  LP FL+C+  + S  KP V+KEC+
Sbjct: 42  LKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKECL 101

Query: 65  HVIATLSNSH--NLSPYITKIINSITRNFRDKNSALQATCISTVSSLS----------PR 112
           H+++ + + H  + + ++TKII  I +  +D +S ++  C  T+ +LS            
Sbjct: 102 HLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSGVRDACRDTIGALSGIYLKGKEEGTN 161

Query: 113 VGASAFVTML--KLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGKLGRMEVRLERL 170
            G+++    L  K L +A+  EQ+   Q GA++C+A  +++A  P      ++  R+ +L
Sbjct: 162 TGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVESAASPPVTSFQKLCPRICKL 220

Query: 171 LKSEVFKAKAAGLVVVGSVIGSGAVDGSGLKGLVSCLLGFLSSQDWAARKAAAEALWRLA 230
           L +  F AKA+ L VV S+   GA+    L+ L+  +   L S DW  RKAAAE L  LA
Sbjct: 221 LSNSSFLAKASLLPVVSSLSQVGAIAPQSLESLLESIHDCLGSTDWVTRKAAAETLTALA 280

Query: 231 VVEKDAVPEFKGKCLKIFESKRFDKVKVVREVMNKMIEAWKQVPDLSEEASPPPQSLDPS 290
                 + E     + + E+ RFDK+K VRE + + ++ WK++     + +     L  S
Sbjct: 281 SHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISGKYVDGASDDSKLSAS 340

Query: 291 KEDGSDRRYLTESRSSSTKGLELKKRSILASKSTPPDSS------FPTTARKRGFLKKVS 344
           ++ GS++    E RS+     +L K+      +  PDS+      FP  A   G LKK +
Sbjct: 341 EQLGSEKN--GEKRSNLA---DLMKKEASDGSTLSPDSASKGKGCFPEKA--VGLLKKKA 393

Query: 345 PAVLHKVD------QKKPSDWRDQISAPSGASLVDAHEDGTVLKIRNNENTKLPKPETKR 398
           P VL   D      Q+       ++  P      D  E G            L    +  
Sbjct: 394 P-VLSDKDFNPEFFQRLERRQSVEVVVPRRCKNNDEEESGL---------DDLNAMGSSN 443

Query: 399 ALFNWSSDDKVHKLR---SGSRVTPYNEESHEFTVSDNTENLH--IKHKDCE-------- 445
            L N  +DDK  K R   +GS+     ++         T   H  + + D +        
Sbjct: 444 RLKNTQADDKQVKGRFDGNGSQARTSGDDKAGVVNGKETPGHHAPVSNTDNQSEGSFTSN 503

Query: 446 --DLSTIRNQLVQIEQQQSSLLDLLQRFIGRSESGMQSLETRVLGLELALDEISYDLAVS 503
             + S I+ QL+Q+E+QQ++L+++LQ FIG S   M +LE RV GLE  +++++ DL++S
Sbjct: 504 RGNWSAIQRQLLQLERQQTNLMNMLQEFIGGSHDSMVTLEGRVRGLERIVEDMARDLSIS 563

Query: 504 TGR 506
           +GR
Sbjct: 564 SGR 566


>sp|P16521|EF3A_YEAST Elongation factor 3A OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=YEF3 PE=1 SV=4
          Length = 1044

 Score = 41.6 bits (96), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 64  IHVIATLSNSHNLSP----YITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAFV 119
           +  +A ++N  NLSP    YI +++ +I  N  +K+  +Q+    T+ S+   V   A  
Sbjct: 68  MQAVAHIANQSNLSPSVEPYIVQLVPAICTNAGNKDKEIQSVASETLISIVNAVNPVAIK 127

Query: 120 TMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGKL 160
            +L  L++A+        ++     ++A +DAA+D  A ++
Sbjct: 128 ALLPHLTNAIVETNKWQEKIAILAAISAMVDAAKDQVALRM 168


>sp|P33892|GCN1_YEAST Translational activator GCN1 OS=Saccharomyces cerevisiae (strain ATCC
            204508 / S288c) GN=GCN1 PE=1 SV=1
          Length = 2672

 Score = 37.4 bits (85), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 60   RKECIHV--IATLSNSHNLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASA 117
            RK C  V  +A L ++ +L PY+ ++I+ +     D     +AT    + +L  R+G   
Sbjct: 1583 RKACKIVGNMAILVDTKDLIPYLQQLIDEVEIAMVDPVPNTRATAARALGALVERLGEEQ 1642

Query: 118  FVTMLKLLSDALFTEQDTNAQVGAALCLAATI 149
            F  ++  L D L  E  +  ++G+A  LA  I
Sbjct: 1643 FPDLIPRLLDTLSDESKSGDRLGSAQALAEVI 1674


>sp|Q5VYK3|ECM29_HUMAN Proteasome-associated protein ECM29 homolog OS=Homo sapiens GN=ECM29
            PE=1 SV=2
          Length = 1845

 Score = 37.4 bits (85), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 17/201 (8%)

Query: 58   GVRKECIHVIATLSNS--HNLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGA 115
            G +  C  VI +L+     +L+PY  K+++++     D+NS +Q +C   +  L      
Sbjct: 1374 GTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLTDRNSVIQKSCAFAMGHLVRTSRD 1433

Query: 116  SAFVTMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGK-----------LGRME 164
            S+   +L+ L+     +++   +   AL + A       PD  K           LG  E
Sbjct: 1434 SSTEKLLQKLNGWYMEKEEPIYKTSCALTIHAI--GRYSPDVLKNHAKEVLPLAFLGMHE 1491

Query: 165  VRLERLLKSEVFKAKAAGLVVVGSVIGSGAVDGSGLKGLVSCLLGFLSSQDWAARKAAAE 224
            +  E   KSE  +      V   +V GS       L+ L++     L SQ W  +   A 
Sbjct: 1492 IADEE--KSEKEECNLWTEVWQENVPGSFGGIRLYLQELITITQKALQSQSWKMKAQGAI 1549

Query: 225  ALWRLAVVEKDAVPEFKGKCL 245
            A+  +A      VP + G  L
Sbjct: 1550 AMASIAKQTSSLVPPYLGMIL 1570


>sp|Q6BXI1|SEC16_DEBHA COPII coat assembly protein SEC16 OS=Debaryomyces hansenii (strain
            ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
            GN=SEC16 PE=3 SV=2
          Length = 2130

 Score = 37.0 bits (84), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 23/157 (14%)

Query: 375  HEDGTVLKIRNNENTKLPKPETKRALFNWSSDDKVHKLRSGSRVTPYNEESHEFTVSDNT 434
            H++ T  K+ N  N  L   + +  +FNWSS   +  L   +    YN  S    V+D  
Sbjct: 905  HKEQTAPKVEN-PNALL---QRQFPIFNWSSSKNIAYLIPSAVTNTYNRTSESVNVTD-- 958

Query: 435  ENLHIKH--KDCEDLSTIR---NQLVQIEQQQSSLLDLLQRFIGRSESGMQSLETRVLGL 489
                IK+  KD   LST     N+L   ++     L+    F+ ++ +GM+  E  V  +
Sbjct: 959  ----IKYVLKDSHYLSTFPGPFNKLKTKKKDVEKWLESYNEFLIQNNTGMKQDEVLVSQI 1014

Query: 490  ELALDEISYDLAVSTGRMTKTNSHGATCCIL-PGADF 525
             LAL  + ++    +   TK     A C +L P  D+
Sbjct: 1015 LLAL--VRFNGDCKSDDFTK-----AACAVLNPSVDY 1044


>sp|B5XTJ9|NIKR_KLEP3 Nickel-responsive regulator OS=Klebsiella pneumoniae (strain 342)
           GN=nikR PE=3 SV=1
          Length = 132

 Score = 37.0 bits (84), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 383 IRNNENTKLPKPETKRALFNWSSDDKVHKLRSGSRVTPYNEESHEFTVSDNTENLHIKHK 442
           +R+  N   P PE++R     S   +  K    SR+       H+ +V+  T ++HI H+
Sbjct: 36  LRDALNQDPPSPESRRGYAVLSYVYEHEKRELASRLVATQHHHHDLSVA--TLHVHISHE 93

Query: 443 DCEDLSTIRNQLVQIEQ 459
           DC +++ ++  + +++ 
Sbjct: 94  DCLEIAVLKGDMAEVQH 110


>sp|A6TFA8|NIKR_KLEP7 Nickel-responsive regulator OS=Klebsiella pneumoniae subsp.
           pneumoniae (strain ATCC 700721 / MGH 78578) GN=nikR PE=3
           SV=1
          Length = 132

 Score = 36.2 bits (82), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 383 IRNNENTKLPKPETKRALFNWSSDDKVHKLRSGSRVTPYNEESHEFTVSDNTENLHIKHK 442
           +R+  N   P PE++R     S   +  K    SR+       H+ +V+  T ++HI H 
Sbjct: 36  LRDALNQDPPSPESRRGYAVLSYVYEHEKRELASRLVATQHHHHDLSVA--TLHVHISHD 93

Query: 443 DCEDLSTIRNQLVQIEQ 459
           DC +++ ++  + +++ 
Sbjct: 94  DCLEIAVLKGDMAEVQH 110


>sp|Q75EV6|EF3_ASHGO Elongation factor 3 OS=Ashbya gossypii (strain ATCC 10895 / CBS
           109.51 / FGSC 9923 / NRRL Y-1056) GN=TEF3 PE=3 SV=2
          Length = 1044

 Score = 36.2 bits (82), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 64  IHVIATLSNSHNLSP----YITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAFV 119
           +  IA ++N +NLSP    YI  ++  +     DK+  +Q+    T+ ++   +   A  
Sbjct: 68  LETIAHIANENNLSPSVEPYIVDLVPEVCVKTGDKDKDVQSIASETLLAIVKAIDPVAIK 127

Query: 120 TMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQ 153
            +L  L+ +L T      +V     ++A +DAA+
Sbjct: 128 VILPHLTKSLVTTNKWQEKVSVLAAISALVDAAK 161


>sp|Q6ZWR6|SYNE1_MOUSE Nesprin-1 OS=Mus musculus GN=Syne1 PE=1 SV=2
          Length = 8799

 Score = 35.8 bits (81), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 20/157 (12%)

Query: 442  KDCEDLS-TIRNQLVQIEQQQSSLLDLLQ----RFIGRSESGMQSLETRVLGLELALDEI 496
            KDC++L   I+ +  ++E+ + + L L+Q       G   S +Q L    + L+  ++++
Sbjct: 7065 KDCQELEDLIKAKEKEVEKIEQNGLALIQNKREEVSGSVMSTLQELRQTWISLDRTVEQL 7124

Query: 497  SYDLAVSTGRMTKTNSHGATCCILPGADFLSSKFWRKTEGRYSPSKFSTSSGTSSLTAMN 556
               L  + G+ +   +H A C  + G            E RYS S+F   +G+S    + 
Sbjct: 7125 KIQLTSALGQWS---NHKAACDEING---------HLMEARYSLSRFRLLTGSSEAVQVQ 7172

Query: 557  YGTNKDRYAEKLKLENRRSRFQSSGGFIVNPLAEIHP 593
                ++ + E   LE +    Q  G      L E HP
Sbjct: 7173 VDNLQNLHDE---LEKQEGGLQKFGSITNQLLKECHP 7206


>sp|Q5R6J0|ECM29_PONAB Proteasome-associated protein ECM29 homolog (Fragment) OS=Pongo
            abelii GN=ECM29 PE=2 SV=2
          Length = 1810

 Score = 35.8 bits (81), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 17/201 (8%)

Query: 58   GVRKECIHVIATLSNS--HNLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGA 115
            G +  C  VI +L+     +L+PY  K+++++     D+NS +Q +C   +  L      
Sbjct: 1339 GTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLTDRNSVIQKSCAFAMGHLVRTSRD 1398

Query: 116  SAFVTMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGK-----------LGRME 164
            S+   +L+ L+     +++   +   AL + A       PD  K           LG  E
Sbjct: 1399 SSTEKLLQKLNGWYMEKEEPIYKTSCALTIHAI--GRYSPDVLKNHAKEVLPLAFLGMHE 1456

Query: 165  VRLERLLKSEVFKAKAAGLVVVGSVIGSGAVDGSGLKGLVSCLLGFLSSQDWAARKAAAE 224
               E   KSE  +      V   +V GS       L+ L++     L SQ W  +   A 
Sbjct: 1457 AADEE--KSEKEECNLWTEVWQENVPGSFGGIRLYLQELITITQKALQSQSWKMKAQGAI 1514

Query: 225  ALWRLAVVEKDAVPEFKGKCL 245
            A+  +A      VP + G  L
Sbjct: 1515 AMASIAKQTSSLVPPYLGMIL 1535


>sp|O93796|EF3_CANGA Elongation factor 3 OS=Candida glabrata (strain ATCC 2001 / CBS 138
           / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TEF3 PE=3 SV=2
          Length = 1045

 Score = 35.4 bits (80), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 64  IHVIATLSNSHNLSP----YITKIINSITRNFRDKNSALQATCISTVSSLSPRVGASAFV 119
           +  +A ++N  NLSP    ++  ++  I     DK+  +QA    T+ ++S  +   A  
Sbjct: 68  LEAVAHIANEANLSPSVEPFVITLVPEICAKAGDKDKDVQAVASKTLVAISKAINPVAIK 127

Query: 120 TMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQD 154
             L  L+ +L T      +V     ++A +DAA++
Sbjct: 128 AYLPHLTKSLETTNKWQEKVSVLAAISALVDAAKE 162


>sp|Q6PDI5|ECM29_MOUSE Proteasome-associated protein ECM29 homolog OS=Mus musculus GN=Ecm29
            PE=1 SV=3
          Length = 1840

 Score = 35.0 bits (79), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 17/201 (8%)

Query: 58   GVRKECIHVIATLSNS--HNLSPYITKIINSITRNFRDKNSALQATCISTVSSLSPRVGA 115
            G +  C  VI +L+     +L+PY  K+++++     D+NS +Q +C   +  L      
Sbjct: 1369 GTKGGCASVIVSLTTQCPQDLTPYSGKLMSALLSGLTDRNSVIQKSCAFAMGHLVRTSRD 1428

Query: 116  SAFVTMLKLLSDALFTEQDTNAQVGAALCLAATIDAAQDPDAGK-----------LGRME 164
            S+   +L+ L+     + +   +   AL + A       PD  K           LG  E
Sbjct: 1429 SSTEKLLQKLNGWYMEKDEPVYKTSCALTIHAI--GRYSPDVLKNHAKEVLPLAFLGMHE 1486

Query: 165  VRLERLLKSEVFKAKAAGLVVVGSVIGSGAVDGSGLKGLVSCLLGFLSSQDWAARKAAAE 224
            +  E   KSE  +      V   +V GS       L+ L++     L SQ W  +   A 
Sbjct: 1487 IADEE--KSEKEECNMWTEVWQENVPGSFGGIRLYLQELITITQKALQSQSWKMKAQGAI 1544

Query: 225  ALWRLAVVEKDAVPEFKGKCL 245
            A+  ++      VP + G  L
Sbjct: 1545 AMASISKQTSSLVPPYLGMIL 1565


>sp|Q9HPL5|COBQ_HALSA Probable cobyric acid synthase OS=Halobacterium salinarum (strain
           ATCC 700922 / JCM 11081 / NRC-1) GN=cobQ PE=3 SV=1
          Length = 512

 Score = 33.1 bits (74), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 330 FPTTARKRGFLKKVSPAVLHKVDQKKPSDWRDQISAPSGASLVDAHED 377
           F   A +RGF   V  A    V+Q  P+D  DQ  + + A+LVDAH D
Sbjct: 455 FGNDAARRGFRDAVFAAA--GVEQPAPADTPDQSPSDAAAALVDAHVD 500


>sp|B0R5X2|COBQ_HALS3 Probable cobyric acid synthase OS=Halobacterium salinarum (strain
           ATCC 29341 / DSM 671 / R1) GN=cobQ PE=3 SV=1
          Length = 512

 Score = 33.1 bits (74), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 330 FPTTARKRGFLKKVSPAVLHKVDQKKPSDWRDQISAPSGASLVDAHED 377
           F   A +RGF   V  A    V+Q  P+D  DQ  + + A+LVDAH D
Sbjct: 455 FGNDAARRGFRDAVFAAA--GVEQPAPADTPDQSPSDAAAALVDAHVD 500


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.128    0.359 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 211,346,989
Number of Sequences: 539616
Number of extensions: 8621195
Number of successful extensions: 21051
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 21005
Number of HSP's gapped (non-prelim): 104
length of query: 604
length of database: 191,569,459
effective HSP length: 123
effective length of query: 481
effective length of database: 125,196,691
effective search space: 60219608371
effective search space used: 60219608371
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)