Your job contains 1 sequence.
>007426
MGRCLSPILRQELANLDKDADSRKSAMKALKSYVKDLDSKAIPLFLAQVSETKENGSVSG
EYTISLYEVLARVHGANIVPQIDSIMTTITKTLASSAGSFPLQQACSRVVPAIARYGIDP
TTPEDKKRHIIHSLCKPLSDSLLGSQESLTAGAALCLKALVDSDNWRFASDEMVNKVCQN
VAGALEEKSTQTNSHMGLVMALAKHNALIVEAYARLLIQSGLRILNAGPGEANSQKRLLA
IQMLNFLMKSLDPRSIFSELELIIEGMENCQSDQMAYVKGASLEALQTAKRIAAENGPKF
EKGSGSVIGSNFGRDHNRRRNLLNGDNRSPSSMSPESQTLNSFAEYDSFIESPVSMSQLS
CDTEYDCRSVNRNVNRKLWSFENGGVDVSLKDGLYSVVQGSPIRSISYSSHHEINDSGGD
YTDEFTGFFQRSPRDRATRSTTPSPQRSHSHINVDNIGIFTTPRRLIRSLQDVNTDFSEK
QSRRFRSPSSIKYEQSPTPRRNGFSREVFYDVKRNGNLHNEDEQLQGVSESVSSTDDGPI
SDDMQVTQQVVSGNKTEIQKLCAKETPPKTAFKLVFGLFFILVAIFTSLFLIDGQENGHH
LVPT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007426
(604 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956282 - symbol:AT1G54385 species:3702 "Ara... 1411 2.2e-144 1
TAIR|locus:2095963 - symbol:AT3G03970 species:3702 "Arabi... 918 1.6e-94 2
TAIR|locus:2136467 - symbol:TOR1 "TORTIFOLIA 1" species:3... 124 0.00047 1
TAIR|locus:2060161 - symbol:AT2G07170 species:3702 "Arabi... 123 0.00056 1
>TAIR|locus:504956282 [details] [associations]
symbol:AT1G54385 species:3702 "Arabidopsis thaliana"
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR007022
InterPro:IPR016024 EMBL:CP002684 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0000245 PANTHER:PTHR12794 EMBL:AY735540
EMBL:AY735541 IPI:IPI00526549 RefSeq:NP_001031189.1
RefSeq:NP_683432.1 UniGene:At.50878 ProteinModelPortal:Q5XVI1
SMR:Q5XVI1 PRIDE:Q5XVI1 EnsemblPlants:AT1G54385.1
EnsemblPlants:AT1G54385.2 GeneID:841880 KEGG:ath:AT1G54385
TAIR:At1g54385 InParanoid:Q5XVI1 OMA:SAIQMIN PhylomeDB:Q5XVI1
ProtClustDB:CLSN2917883 Genevestigator:Q5XVI1 Uniprot:Q5XVI1
Length = 560
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 322/509 (63%), Positives = 372/509 (73%)
Query: 1 MGRCLSPILRQELANLDKDADSRKSAMKALKSYVKDLDSKAIPLFLAQVSETKENGSVSG 60
MG L+PILRQELANLDKD +SRKSAMKALKSYVKDLDSKAIP FLAQV ETKE S+SG
Sbjct: 1 MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60
Query: 61 EYTISLYEVLARVHGANIVPQIDSIMTTITKTLASSAGSFPLQQACSRVVPAIARYGIDP 120
EYTISLYE+LARVHG NIVPQID+IM+TI KTLASSAGSFPLQQACS+V+PAIARYGIDP
Sbjct: 61 EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120
Query: 121 TTPEDKKRHIIHSLCKPLSDSLLGSQESLTAGAALCLKALVDSDNWRFASDEMVNKVCQN 180
TT EDKKR IIHSLCKPL+DSLL SQESLT+GAALCLKALVDSDNWRFASDEMVN+VCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180
Query: 181 VAGALEEKSTQTNSHMGLVMALAKHNALIVEAYARLLIQSGLRILNAGPGEANSQKRLLA 240
V AL+ S QT+ MGLVM+LAKHN LIVEAYARLLI +GLRIL G E NSQKRL A
Sbjct: 181 VVVALDSNSNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFGVSEGNSQKRLSA 240
Query: 241 IQMLNFLMKSLDPRSIFSELELIIEGMENCQSDQMAYVKGASLEALQTAKRIAAENGPKF 300
+QMLNFLMK LDPRSI+SE+ELII+ ME CQSDQMAYV+GA+ EA+ T+KRIAAE K
Sbjct: 241 VQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELESKM 300
Query: 301 EKGSGSVIGSNFXXXXXXXXXXXXXXXXSPSSMSPESQTLNSFAEYDSFIESPVSMSQLS 360
EKG SV GSNF S+SPESQTL SF+ YDS +ES +S S
Sbjct: 301 EKGCRSVTGSNFSRRNCSSIVPDY-------SLSPESQTLGSFSGYDSPVESS-PISHTS 352
Query: 361 CDTEYDCRSVNRNVNRKLWSF-ENGGV-DVSLKDGLYS-VVQGSPIRSISYSSHHEINDS 417
C++E+D RSVNR KLW ENGGV D+SLKDGL+S V +GS S S ++ ++
Sbjct: 353 CNSEFDRRSVNR----KLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDSPLVPYDTCEN 408
Query: 418 GGDYTDEFTGFFQRSPRDRATRSTTPSPQRSHSHINVD-NIGIFTTPRRL--IRSLQDVN 474
G DEF GF S R+ + +P QRS D NI T + + ++ DV+
Sbjct: 409 G----DEFEGFLMESLRNT---TPSPQRQRSRRINAEDFNI-FSTPRKLISSLQYPDDVD 460
Query: 475 TDFSEKQSRRFRSP--SSIKYEQSPTPRR 501
D S+ QS R +I ++P R+
Sbjct: 461 LDHSDIQSPILRGEREKTIGSRKNPKLRK 489
>TAIR|locus:2095963 [details] [associations]
symbol:AT3G03970 species:3702 "Arabidopsis thaliana"
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR007022
InterPro:IPR016024 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000245
EMBL:AC011698 PANTHER:PTHR12794 EMBL:BT005915 EMBL:AK117787
IPI:IPI00537221 RefSeq:NP_187047.1 RefSeq:NP_974214.1
RefSeq:NP_974215.1 UniGene:At.40919 ProteinModelPortal:Q9SQR5
STRING:Q9SQR5 EnsemblPlants:AT3G03970.1 EnsemblPlants:AT3G03970.2
EnsemblPlants:AT3G03970.3 GeneID:819552 KEGG:ath:AT3G03970
TAIR:At3g03970 eggNOG:NOG305410 HOGENOM:HOG000153523
InParanoid:Q9SQR5 OMA:TTEDICE PhylomeDB:Q9SQR5
ProtClustDB:CLSN2684259 Genevestigator:Q9SQR5 Uniprot:Q9SQR5
Length = 554
Score = 918 (328.2 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 190/303 (62%), Positives = 229/303 (75%)
Query: 1 MGRCLSPILRQELANLDKDADSRKSAMKALKSYVKDLDSKAIPLFLAQVSETKENGSVSG 60
MGR L RQELANLDKD DS K+AM L+S VKDLD+K + +F+AQ+S+ KE G SG
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 61 EYTISLYEVLARVHGANIVPQIDSIMTTITKTLASSAGSFPLQQACSRVVPAIARYGIDP 120
YT+SL+E LAR HG I P ID IM I +TL+SS GS +QQACSR V A+ARYGIDP
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 121 TTPEDKKRHIIHSLCKPLSDSLLGSQ--ESLTAGAALCLKALVDSDNWRFASDEMVNKVC 178
TTPEDKK ++IHSLCKPLSDSL+ SQ + L G+ALCLK+LVD DNWR AS EMVN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 179 QNVAGALEEKSTQTNSHMGLVMALAKHNALIVEAYARLLIQSGLRILNAGPGEANSQKRL 238
Q++A ALE S++ SHM LVMAL+KHN VEAYARL ++SGLRIL+ G E +SQKRL
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLGVVEGDSQKRL 240
Query: 239 LAIQMLNFLMKSLDPRSIFSELELIIEGMENCQSDQMAYVKGASLEALQTAKRIAAENGP 298
LAIQMLNFLMK+L+P+SI SELELI + ME Q DQ YVK A+ E ++ A+R+ E P
Sbjct: 241 LAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQH-YVKMAAHETMRQAERLICEADP 299
Query: 299 KFE 301
F+
Sbjct: 300 MFD 302
Score = 42 (19.8 bits), Expect = 1.6e-94, Sum P(2) = 1.6e-94
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 331 SSMSPESQTLNSFAEYDSFIESPVSMSQLSCDTEYD 366
+S+S ++ +S E+D + S S ++ EYD
Sbjct: 310 NSLSGSVKSTSSLREHDGSVYSRQDRSYVNDQDEYD 345
>TAIR|locus:2136467 [details] [associations]
symbol:TOR1 "TORTIFOLIA 1" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0010031
"circumnutation" evidence=IMP] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0010005 "cortical microtubule, transverse to long
axis" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
InterPro:IPR016024 GO:GO:0007275 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 EMBL:AL035680 EMBL:AL161566
GO:GO:0009826 GO:GO:0008017 GO:GO:0010031 GO:GO:0010005
EMBL:AB176521 EMBL:AJ249836 EMBL:BT006451 IPI:IPI00530987
PIR:T06036 RefSeq:NP_194436.2 UniGene:At.32124
ProteinModelPortal:Q9T041 SMR:Q9T041 IntAct:Q9T041 STRING:Q9T041
PaxDb:Q9T041 PRIDE:Q9T041 EnsemblPlants:AT4G27060.1 GeneID:828814
KEGG:ath:AT4G27060 TAIR:At4g27060 eggNOG:NOG291487
HOGENOM:HOG000029994 InParanoid:Q9T041 OMA:GGSHDSM PhylomeDB:Q9T041
ProtClustDB:CLSN2680449 Genevestigator:Q9T041 GermOnline:AT4G27060
Uniprot:Q9T041
Length = 864
Score = 124 (48.7 bits), Expect = 0.00047, P = 0.00047
Identities = 67/299 (22%), Positives = 138/299 (46%)
Query: 9 LRQE-LANLDK--DADSRKSAMKALKSYVKDLDSKAIPLFLAQVSETKENG--SVSGEYT 63
L+Q+ L ++ K D D+ + A++ L+ ++ L + +P+FL + ++ + +V E
Sbjct: 42 LKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPETLPMFLNCLYDSCSDPKPAVKKE-C 100
Query: 64 ISLYEVLARVHGANIVPQIDSIMTTITKTLASSAGSFPLQQACSRVVPAIAR-Y--GIDP 120
+ L + +H + + I+ I K L S ++ AC + A++ Y G +
Sbjct: 101 LHLLSYVCSLHCDSTAAHLTKIIAQIVKRLKDSDSG--VRDACRDTIGALSGIYLKGKEE 158
Query: 121 TTPEDKKRHIIHSLCKPLSDSLLGSQESLT-AGAALCLKALVDSDNWRFASDEMVN--KV 177
T + KPL +++ G Q + +GA++C+ +V+S AS + + K+
Sbjct: 159 GTNTGSASLAVGLFVKPLFEAM-GEQNKVVQSGASMCMARMVESA----ASPPVTSFQKL 213
Query: 178 CQNVAGALEEKSTQTN-SHMGLVMALAKHNALIVEAYARLLIQSGLRILNAGPGEANSQK 236
C + L S S + +V +L++ A+ ++ ++S L ++ G +
Sbjct: 214 CPRICKLLSNSSFLAKASLLPVVSSLSQVGAIAPQS-----LESLLESIHDCLGSTDWVT 268
Query: 237 RLLAIQMLNFLMKSLDPRSIFSELELIIEGMENCQSDQMAYVKGASLEALQTAKRIAAE 295
R A + L L S I + + I +E C+ D++ V+ + EALQ K+I+ +
Sbjct: 269 RKAAAETLTALA-SHSSGLIKEKTDSTITVLETCRFDKIKPVRESVTEALQLWKKISGK 326
>TAIR|locus:2060161 [details] [associations]
symbol:AT2G07170 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0007017 "microtubule-based
process" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0031048 "chromatin silencing by small RNA" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] InterPro:IPR000357 InterPro:IPR016024
Pfam:PF02985 EMBL:CP002685 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 IPI:IPI00530465 RefSeq:NP_178730.2
UniGene:At.41010 ProteinModelPortal:F4IK92 SMR:F4IK92 PRIDE:F4IK92
EnsemblPlants:AT2G07170.1 GeneID:815286 KEGG:ath:AT2G07170
OMA:SAVRKEC Uniprot:F4IK92
Length = 820
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 62/295 (21%), Positives = 127/295 (43%)
Query: 19 DADSRKSAMKALKSYVKDLDSKAIPLFLAQVSET-KENGSVSGEYTISLYEVLARVHGAN 77
D D+ + + L+ V+ L + FL+ + +T E S + I L LAR H
Sbjct: 40 DRDTYQRGVDELEKTVEHLAPDKVSCFLSCILDTDSEQKSAVRKECIRLMGTLARFHEGL 99
Query: 78 IVPQIDSIMTTITKTLASSAGSFPLQQACSRVVPAIARYGIDPTTPEDKKRHIIHSLCKP 137
+ P + ++++I K L ++ AC + +A + ED+ + SL KP
Sbjct: 100 VGPYLGKMVSSIVKRLKDPDSV--VRDACIETMGVLAS---KMSCYEDQNFGVFVSLVKP 154
Query: 138 LSDSLLGSQESLTAGAALCLKALVDSDNWRFASDEMVNKVCQNVAGALEEKSTQTNSHMG 197
L +++ + + +GAALCL ++DS S E + Q + + NSH
Sbjct: 155 LFEAIGDQNKYVQSGAALCLARVIDS------SPEAPVAIIQRML--MRTVKLLNNSHFI 206
Query: 198 LVMALAKHNALIV---EAYARLLIQSGLRIL-NAGPGEANSQKRLLAIQMLNFLMKSLDP 253
A+ + N I+ A ++ ++ S + +A + + ++ ++ ++
Sbjct: 207 AKPAVIELNRSIILAGGATSKSVLSSAMSSFQDALKNKDWTTRKAASVALMEIAATG--- 263
Query: 254 RSIFSELEL-IIEGMENCQSDQMAYVKGASLEALQTAKRIAAENGPKFEKGSGSV 307
L+ I +E+C+ D++ V+ + + AL+ K + + P+ + SV
Sbjct: 264 EKFLGPLKASCICSLESCRFDKVKPVRDSVILALKYWKGVPGSDSPEPSETESSV 318
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 604 588 0.00083 120 3 11 23 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 609 (65 KB)
Total size of DFA: 294 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.29u 0.11s 56.40t Elapsed: 00:00:04
Total cpu time: 56.29u 0.11s 56.40t Elapsed: 00:00:04
Start: Tue May 21 04:21:31 2013 End: Tue May 21 04:21:35 2013