BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007427
(604 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 151/277 (54%), Gaps = 12/277 (4%)
Query: 324 VLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAKIVSFY 382
+LG+G G YK L G +VAVKR+K + +F +++++ H NL ++ F
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ E+L++Y ++ NGS+ L E R + PL W R I +A+GLA+LH K
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIALGSARGLAYLHDHCDP-K 154
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA----IGR-SPEFPEGKR 497
+ H ++K++NIL+ E + A + +FG L+ + A IG +PE+ +
Sbjct: 155 IIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGK 211
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K DV+ +G++LLE+ITG+ + + N+ L DWV+ ++ ++DV+ L
Sbjct: 212 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD-LQ 270
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
E+ +L ++AL CT +P +RPKMSEV+R +E
Sbjct: 271 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 151/277 (54%), Gaps = 12/277 (4%)
Query: 324 VLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAKIVSFY 382
+LG+G G YK L G +VAVKR+K + +F +++++ H NL ++ F
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ E+L++Y ++ NGS+ L E R + PL W R I +A+GLA+LH K
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRE-RPESQPPLDWPKRQRIALGSARGLAYLHDHCDP-K 162
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA----IGR-SPEFPEGKR 497
+ H ++K++NIL+ E + A + +FG L+ + A IG +PE+ +
Sbjct: 163 IIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGK 219
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K DV+ +G++LLE+ITG+ + + N+ L DWV+ ++ ++DV+ L
Sbjct: 220 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVD-LQ 278
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
E+ +L ++AL CT +P +RPKMSEV+R +E
Sbjct: 279 GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 119/205 (58%), Gaps = 25/205 (12%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALS----KKEFVQQMQLLGKLKHENLAKIVS 380
+G+G G YK + + VAVK++ M ++ K++F Q+++++ K +HENL +++
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F ++ ++Y ++PNGSL D L S G PL+W R I + A G+ FLH+ H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR--------SPEF 492
H+ ++KS+NIL+ ++ + AK+++FG S K ++ + R +PE
Sbjct: 156 HR----DIKSANILL---DEAFTAKISDFGLAR--ASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 493 PEGKRLTHKADVYCFGIILLEVITG 517
G+ +T K+D+Y FG++LLE+ITG
Sbjct: 207 LRGE-ITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 119/208 (57%), Gaps = 31/208 (14%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALS----KKEFVQQMQLLGKLKHENLAKIVS 380
+G+G G YK + + VAVK++ M ++ K++F Q+++++ K +HENL +++
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F ++ ++Y ++PNGSL D L S G PL+W R I + A G+ FLH+ H
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA--------IGRSPEF 492
H+ ++KS+NIL+ ++ + AK+++FG +ASE A +G +
Sbjct: 156 HR----DIKSANILL---DEAFTAKISDFGL------ARASEKFAQTVMXXRIVGTTAYM 202
Query: 493 -PEGKR--LTHKADVYCFGIILLEVITG 517
PE R +T K+D+Y FG++LLE+ITG
Sbjct: 203 APEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 119/208 (57%), Gaps = 31/208 (14%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALS----KKEFVQQMQLLGKLKHENLAKIVS 380
+G+G G YK + + VAVK++ M ++ K++F Q+++++ K +HENL +++
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F ++ ++Y ++PNGSL D L S G PL+W R I + A G+ FLH+ H
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA--------IGRSPEF 492
H+ ++KS+NIL+ ++ + AK+++FG +ASE A +G +
Sbjct: 150 HR----DIKSANILL---DEAFTAKISDFGL------ARASEKFAQXVMXXRIVGTTAYM 196
Query: 493 -PEGKR--LTHKADVYCFGIILLEVITG 517
PE R +T K+D+Y FG++LLE+ITG
Sbjct: 197 APEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 116/204 (56%), Gaps = 25/204 (12%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKNMNALS----KKEFVQQMQLLGKLKHENLAKIVSF 381
G+G G YK + + VAVK++ M ++ K++F Q++++ K +HENL +++ F
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
++ ++Y + PNGSL D L S G PL+W R I + A G+ FLH+ H H
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR--------SPEFP 493
+ ++KS+NIL+ ++ + AK+++FG S K ++ + R +PE
Sbjct: 148 R----DIKSANILL---DEAFTAKISDFGLAR--ASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 494 EGKRLTHKADVYCFGIILLEVITG 517
G+ +T K+D+Y FG++LLE+ITG
Sbjct: 199 RGE-ITPKSDIYSFGVVLLEIITG 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 35/307 (11%)
Query: 304 FFDKTIPVFDLDDLLRASAE--VLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV 361
F +P+ DL++ ++G G G YK L GA VA+KR ++ +EF
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRL 421
+++ L +H +L ++ F + E ++IY+++ NG+L L+ S + + ++W RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRL 142
Query: 422 SIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS 481
I A+GL + LH+ + H ++KS NIL+ ++ + K+T+FG S+K +
Sbjct: 143 EICIGAARGLHY----LHTRAIIHRDVKSINILL---DENFVPKITDFGI-----SKKGT 190
Query: 482 ENLAIGRS--------------PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGN 527
E +G++ PE+ RLT K+DVY FG++L EV+ R S
Sbjct: 191 E---LGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
Query: 528 NETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMS 587
+L++W +N I+D LA + + + + A++C ++ E RP M
Sbjct: 248 EMV--NLAEWAVESHNNGQLEQIVDPN-LADKIRPESLRKFGDTAVKCLALSSEDRPSMG 304
Query: 588 EVLRRIE 594
+VL ++E
Sbjct: 305 DVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 150/304 (49%), Gaps = 29/304 (9%)
Query: 304 FFDKTIPVFDLDDLLRASAE--VLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV 361
F +P+ DL++ ++G G G YK L GA VA+KR ++ +EF
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRL 421
+++ L +H +L ++ F + E ++IY+++ NG+L L+ S + + ++W RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRL 142
Query: 422 SIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS 481
I A+GL + LH+ + H ++KS NIL+ ++ + K+T+FG S+K +
Sbjct: 143 EICIGAARGLHY----LHTRAIIHRDVKSINILL---DENFVPKITDFGI-----SKKGT 190
Query: 482 E----------NLAIGR-SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNET 530
E +G PE+ RLT K+DVY FG++L EV+ R S
Sbjct: 191 ELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 531 SGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVL 590
+L++W +N I+D LA + + + + A++C ++ E RP M +VL
Sbjct: 251 --NLAEWAVESHNNGQLEQIVDPN-LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
Query: 591 RRIE 594
++E
Sbjct: 308 WKLE 311
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 74 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
NL+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 130 ----NLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEIL 556
T K+DV+ FGI+L E++T GRIP G N E +L RMV ++ ++ + L
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLERGYRMVRPDNCPEELYQLMRL 241
Query: 557 AARE 560
+E
Sbjct: 242 CWKE 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 134 ----DLRAANILV---SDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMV 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 87 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 143 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEIL 556
T K+DV+ FGI+L E++T GRIP G N E +L RMV ++ ++ + L
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRL 254
Query: 557 AARE 560
+E
Sbjct: 255 CWKE 258
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 80 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 136 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMV 232
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 140 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEIL 556
T K+DV+ FGI+L E++T GRIP G N E +L RMV ++ ++ + L
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRL 251
Query: 557 AARE 560
+E
Sbjct: 252 CWKE 255
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 88 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 144 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEIL 556
T K+DV+ FGI+L E++T GRIP G N E +L RMV ++ ++ + L
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRL 255
Query: 557 AARE 560
+E
Sbjct: 256 CWKE 259
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 134 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLERGYRMV 230
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 134 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMV 230
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 19/244 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 86 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 142 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEIL 556
T K+DV+ FGI+L E++T GRIP G N E +L RMV ++ ++ + L
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMVRPDNCPEELYQLMRL 253
Query: 557 AARE 560
+E
Sbjct: 254 CWKE 257
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 79 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 135 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLERGYRMV 231
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 134 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLERGYRMV 230
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 84 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 140 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMV 236
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 73 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 129 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLERGYRMV 225
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 115/228 (50%), Gaps = 20/228 (8%)
Query: 306 DKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRV--KNMNALSKKEFVQQ 363
D IP DL+ E +G G G+ ++A G+ VAVK + ++ +A EF+++
Sbjct: 31 DMDIPWCDLN-----IKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLRE 84
Query: 364 MQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSI 423
+ ++ +L+H N+ + I+ E+L GSL+ LLH+S R L RLS+
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSM 142
Query: 424 IKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN 483
AKG+ +LH + + H NLKS N+L+ ++ Y K+ +FG L S S
Sbjct: 143 AYDVAKGMNYLHN--RNPPIVHRNLKSPNLLVDKK---YTVKVCDFGLSRLKASTFLSSK 197
Query: 484 LAIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIP-GNGSPG 526
A G +PE + K+DVY FG+IL E+ T + P GN +P
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 19/225 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
E LG G+ G + VAVK +K ++S F+ + L+ +L+H+ L ++ +
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++E II E++ NGSL D L G I L L + Q A+G+AF+ + + H+
Sbjct: 83 -TQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKR 497
+L+++NIL+ +D K+ +FG L+ +R+ ++ +PE
Sbjct: 139 ----DLRAANILV---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
T K+DV+ FGI+L E++T GRIP G N E +L RMV
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPEVIQNLERGYRMV 235
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 37/266 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + T VA+K +K +S + F+++ Q++ KLKH+ L ++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVV-S 74
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+E I+ E++ GSL D L + G L + + Q A G+A++ + + H+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAYIERMNYIHR-- 129
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
+L+S+NIL+ + K+ +FG L+ +R+ ++ +PE R T
Sbjct: 130 --DLRSANILV---GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFT 184
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FGI+L E++T GR+P G N E + RM D
Sbjct: 185 IKSDVWSFGILLTELVTKGRVPYPGM-NNREVLEQVERGYRMPCPQDCP----------- 232
Query: 559 REGQNEMLRLTELALECTDIAPEKRP 584
+ L EL + C PE+RP
Sbjct: 233 -------ISLHELMIHCWKKDPEERP 251
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 311 VFDLDDLLRASAEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGK 369
+F DL+ EVLGKG G K T E+G V+ +K + + +++ F+++++++
Sbjct: 6 IFRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRC 63
Query: 370 LKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
L+H N+ K + Y + I E++ G+L ++ W+ R+S K A
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDIAS 119
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-------------- 475
G+A+ LHS + H +L S N L+ REN + +FG L+
Sbjct: 120 GMAY----LHSMNIIHRDLNSHNCLV-RENK--NVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 476 -PSRKASENLA---IGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETS 531
P RK + +PE G+ K DV+ FGI+L E+I GR+ N P +
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRV--NADPDYLPRT 229
Query: 532 GDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLR 591
D VR +D N + + C D+ PEKRP ++
Sbjct: 230 MDFGLNVRGFLDRYCPP--------------NCPPSFFPITVRCCDLDPEKRPSFVKLEH 275
Query: 592 RIEEIQ 597
+E ++
Sbjct: 276 WLETLR 281
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 20/228 (8%)
Query: 306 DKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRV--KNMNALSKKEFVQQ 363
D IP DL+ E +G G G+ ++A G+ VAVK + ++ +A EF+++
Sbjct: 31 DMDIPWCDLN-----IKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLRE 84
Query: 364 MQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSI 423
+ ++ +L+H N+ + I+ E+L GSL+ LLH+S R L RLS+
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSM 142
Query: 424 IKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN 483
AKG+ +LH + + H +LKS N+L+ ++ Y K+ +FG L S
Sbjct: 143 AYDVAKGMNYLHN--RNPPIVHRDLKSPNLLVDKK---YTVKVCDFGLSRLKASXFLXSK 197
Query: 484 LAIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIP-GNGSPG 526
A G +PE + K+DVY FG+IL E+ T + P GN +P
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 72
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 127
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 128 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 182 TIKSDVWSFGILLTELTTKGRVPYPG 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 76
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 131
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 132 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 186 TIKSDVWSFGILLTELTTKGRVPYPG 211
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 74
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 129
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 130 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 184 TIKSDVWSFGILLTELTTKGRVPYPG 209
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G+ G + + VA+K ++ A+S+++F+++ +++ KL H L ++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ +++EF+ +G L D L RG+ A T L + +G+A+L + V
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC----VI 128
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ EN + K+++FG + + + + SPE R +
Sbjct: 129 HRDLAARNCLV-GENQV--IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FG+++ EV + G+IP + N+E D+S R+ ST + +
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 244
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
RE PE RP S +LR++ EI
Sbjct: 245 RE------------------RPEDRPAFSRLLRQLAEI 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 73
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 128
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 129 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 18/205 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + AT VAVK +K ++S + F+ + ++ L+H+ L K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
KE II EF+ GSL D L G + PL S Q A+G+AF+ Q + H+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFS--AQIAEGMAFIEQRNYIHR-- 135
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
+L+++NIL+ + K+ +FG ++ +R+ ++ +PE T
Sbjct: 136 --DLRAANILV---SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 190
Query: 500 HKADVYCFGIILLEVIT-GRIPGNG 523
K+DV+ FGI+L+E++T GRIP G
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPG 215
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G+ G + + VA+K ++ A+S+++F+++ +++ KL H L ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ +++EF+ +G L D L RG+ A T L + +G+A+L + V
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC----VI 125
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ EN + K+++FG + + + + SPE R +
Sbjct: 126 HRDLAARNCLV-GENQV--IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FG+++ EV + G+IP + N+E D+S R+ ST +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTHVY------- 234
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ C PE RP S +LR++ EI
Sbjct: 235 -----------QIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 128/278 (46%), Gaps = 37/278 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G+ G + + VA+K ++ A+S+++F+++ +++ KL H L ++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ +++EF+ +G L D L RG+ A T L + +G+A+L + V
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC----VI 123
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ EN + K+++FG + + + + SPE R +
Sbjct: 124 HRDLAARNCLV-GENQV--IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FG+++ EV + G+IP + N+E D+S R+ ST +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTHVY------- 232
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ C PE RP S +LR++ EI
Sbjct: 233 -----------QIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K N +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 250
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 305
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 306 ---DLRAANILV-GENLV--CKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 360 TIKSDVWSFGILLTELTTKGRVPYPG 385
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 130
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H NL + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 131 --LGTKRYIHRNLATRNILVENEN---RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 186 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 235
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 236 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 291
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 304
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 305 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 304
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 305 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVERMNYVHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 136 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 18/205 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + AT VAVK +K ++S + F+ + ++ L+H+ L K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
KE II EF+ GSL D L G + PL S Q A+G+AF+ Q + H+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFS--AQIAEGMAFIEQRNYIHR-- 308
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
+L+++NIL+ + K+ +FG ++ +R+ ++ +PE T
Sbjct: 309 --DLRAANILV---SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 363
Query: 500 HKADVYCFGIILLEVIT-GRIPGNG 523
K+DV+ FGI+L+E++T GRIP G
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 80
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVERMNYVHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 136 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ K++HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L ++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLAAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 249
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 304
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 305 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 359 TIKSDVWSFGILLTELTTKGRVPYPG 384
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + AT VAVK +K ++S + F+ + ++ L+H+ L K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
KE II EF+ GSL D L G + PL S Q A+G+AF+ Q + H+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFS--AQIAEGMAFIEQRNYIHR-- 302
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEGKRLTHKADV 504
+L+++NIL+ + K+ +FG +R ++ +PE T K+DV
Sbjct: 303 --DLRAANILV---SASLVCKIADFGL-----ARVGAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 505 YCFGIILLEVIT-GRIPGNG 523
+ FGI+L+E++T GRIP G
Sbjct: 353 WSFGILLMEIVTYGRIPYPG 372
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 37/278 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G+ G + + VA+K +K ++S+ +F+++ +++ KL H L ++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ +++EF+ +G L D L RG+ A T L + +G+A+L + V
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC----VI 145
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ EN + K+++FG + + + + SPE R +
Sbjct: 146 HRDLAARNCLV-GENQV--IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FG+++ EV + G+IP + N+E D+S R+ ST +
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTHVY------- 254
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ C PE RP S +LR++ EI
Sbjct: 255 -----------QIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ G L D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 136
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 137 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 241
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 242 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 297
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 160
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 161 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 265
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 266 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 135
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 136 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 240
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 241 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 296
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 132
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 133 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 237
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 238 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 129
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 130 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 234
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 127
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 128 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 232
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 233 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 288
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 134
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 135 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 239
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 240 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 128
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 129 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 233
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 234 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 289
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 83
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ G L D L G R+P + + Q A G+A++ + + H+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVERMNYVHR- 138
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 139 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 133
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 134 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 238
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 239 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 294
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 129
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 130 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 234
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 147
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 148 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 252
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 37/278 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G+ G + + VA+K ++ A+S+++F+++ +++ KL H L ++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ ++ EF+ +G L D L RG+ A T L + +G+A+L + V
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEAC----VI 126
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ EN + K+++FG + + + + SPE R +
Sbjct: 127 HRDLAARNCLV-GENQV--IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FG+++ EV + G+IP + N+E D+S R+ ST + +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 242
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
RE PE RP S +LR++ EI
Sbjct: 243 RE------------------RPEDRPAFSRLLRQLAEI 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H R + I L L Q KG+ +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKL-----LQYTSQICKGMEY-- 132
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 133 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 237
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 238 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 147
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 148 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 252
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 308
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG+G G + T VA+K +K +S + F+Q+ Q++ KL+HE L ++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-S 332
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E I+ E++ GSL D L G R+P + + Q A G+A++ + + H+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL----VDMAAQIASGMAYVERMNYVHR- 387
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRL 498
+L+++NIL+ EN + K+ +FG L+ +R+ ++ +PE R
Sbjct: 388 ---DLRAANILV-GENLV--CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 499 THKADVYCFGIILLEVIT-GRIPGNG 523
T K+DV+ FGI+L E+ T GR+P G
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPG 467
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I EFLP GSL + L H+ R + I L L Q KG+ +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 132
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 133 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 237
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 238 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 293
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 127/278 (45%), Gaps = 37/278 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G+ G + + VA+K ++ A+S+++F+++ +++ KL H L ++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ +++EF+ +G L D L RG+ A T L + +G+A+L + V
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVCEGMAYLEEA----SVI 125
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ EN + K+++FG + + + + SPE R +
Sbjct: 126 HRDLAARNCLV-GENQV--IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FG+++ EV + G+IP + N+E D+S R+ ST +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTHVY------- 234
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ C PE RP S +LR++ I
Sbjct: 235 -----------QIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 46/296 (15%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
LGKG GS + +G VVAVK++++ ++F +++++L L+H+N+ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 380 SFYYSKEEK--LIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
YS + +I E+LP GSL D L H+ R + I L L Q KG+ +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKL-----LQYTSQICKGMEY-- 129
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA-IGRSPEF-- 492
L + + H +L + NIL+ EN R K+ +FG +LP K + G SP F
Sbjct: 130 --LGTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 493 -PEG---KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE + + +DV+ FG++L E+ T I + SP ++++RM + ND
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPP--------AEFMRM-IGNDKQG 234
Query: 549 DILDVEILAAREGQNEMLR-------LTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ ++ + + R + + EC + +RP ++ R+++I+
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + + VAVK +K +S + F+++ L+ L+H+ L ++ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+E II E++ GSL D L G G++ L S Q A+G+A++ + + H+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEG-GKVLLPKLIDFS--AQIAEGMAYIERKNYIHR-- 134
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
+L+++N+L+ ++ K+ +FG ++ +R+ ++ +PE T
Sbjct: 135 --DLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FGI+L E++T G+IP G N + LS RM + ++ D+ +
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRT-NADVMTALSQGYRMPRVENCPDELYDIMKMCW 248
Query: 559 REGQNE 564
+E E
Sbjct: 249 KEKAEE 254
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + + VAVK +K +S + F+++ L+ L+H+ L ++ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+E II EF+ GSL D L G G++ L S Q A+G+A++ + + H+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEG-GKVLLPKLIDFS--AQIAEGMAYIERKNYIHR-- 133
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
+L+++N+L+ ++ K+ +FG ++ +R+ ++ +PE T
Sbjct: 134 --DLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K++V+ FGI+L E++T G+IP G N + LS RM + ++ D+ +
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRT-NADVMSALSQGYRMPRMENCPDELYDIMKMCW 247
Query: 559 REGQNE 564
+E E
Sbjct: 248 KEKAEE 253
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 37/285 (12%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 75
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH S + I +QTA+G+ +LH +
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLH----AK 127
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + +N + K+ +FG L + SR + E L+ PE R
Sbjct: 128 SIIHRDLKSNNIFLHEDNTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 498 L------THKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ + ++DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IEMVGRGSLSPDLS 236
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
V N R+ L EC ++RP +L IEE+
Sbjct: 237 KVR-------SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIVS 380
E +G+G G+ Y A + +G VA++++ N+ KKE + ++ ++ + K+ N+ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
Y +E ++ E+L GSL D++ E+ G+I ++ ++ + L F LH
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF----LH 134
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
S++V H N+KS NIL+ + + KLT+FGF + ++ + +G +PE
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSV---KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K K D++ GI+ +E+I G P
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
EV+G+G G KA + V A+K++++ + +K F+ +++ L ++ H N+ K+ +
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDV-AIKQIESES--ERKAFIVELRQLSRVNHPNIVKL--YG 68
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLAFLHQTLH 439
++ E+ GSL+++LH G PL + T +S Q ++G+A+LH ++
Sbjct: 69 ACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLH-SMQ 122
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS-ENLAIGRSPEFPEGKRL 498
+ H +LK N+L+ + K+ +FG + + + + A +PE EG
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVL--KICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNY 180
Query: 499 THKADVYCFGIILLEVITGRIP 520
+ K DV+ +GIIL EVIT R P
Sbjct: 181 SEKCDVFSWGIILWEVITRRKP 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 106/202 (52%), Gaps = 17/202 (8%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
EV+G+G G KA + V A+K++++ + +K F+ +++ L ++ H N+ K+ +
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDV-AIKQIESES--ERKAFIVELRQLSRVNHPNIVKL--YG 69
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLAFLHQTLH 439
++ E+ GSL+++LH G PL + T +S Q ++G+A+LH ++
Sbjct: 70 ACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLH-SMQ 123
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS-ENLAIGRSPEFPEGKRL 498
+ H +LK N+L+ + K+ +FG + + + + A +PE EG
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVL--KICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNY 181
Query: 499 THKADVYCFGIILLEVITGRIP 520
+ K DV+ +GIIL EVIT R P
Sbjct: 182 SEKCDVFSWGIILWEVITRRKP 203
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 123/292 (42%), Gaps = 51/292 (17%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH S + I +QTA+G+ +LH +
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLH----AK 139
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF--------- 492
+ H +LKS+NI + +N + K+ +FG A+E S +F
Sbjct: 140 SIIHRDLKSNNIFLHEDNTV---KIGDFGL--------ATEKSRWSGSHQFEQLSGSILW 188
Query: 493 --PEGKRL------THKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE R+ + ++DVY FGI+L E++TG++P + ++ + MV
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IEMVGRG 241
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
S D+ V N R+ L EC ++RP +L IEE+
Sbjct: 242 SLSPDLSKVR-------SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIVS 380
E +G+G G+ Y A + +G VA++++ N+ KKE + ++ ++ + K+ N+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
Y +E ++ E+L GSL D++ E+ G+I ++ ++ + L F LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF----LH 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
S++V H ++KS NIL+ + + KLT+FGF + ++ + +G +PE
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSV---KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K K D++ GI+ +E+I G P
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIVS 380
E +G+G G+ Y A + +G VA++++ N+ KKE + ++ ++ + K+ N+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
Y +E ++ E+L GSL D++ E+ G+I ++ ++ + L F LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF----LH 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
S++V H ++KS NIL+ + + KLT+FGF + ++ + +G +PE
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSV---KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K K D++ GI+ +E+I G P
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIVS 380
E +G+G G+ Y A + +G VA++++ N+ KKE + ++ ++ + K+ N+ +
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
Y +E ++ E+L GSL D++ E+ G+I ++ ++ + L F LH
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF----LH 134
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
S++V H ++KS NIL+ + + KLT+FGF + ++ + +G +PE
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSV---KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K K D++ GI+ +E+I G P
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 107/205 (52%), Gaps = 22/205 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIVS 380
E +G+G G+ Y A + +G VA++++ N+ KKE + ++ ++ + K+ N+ +
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
Y +E ++ E+L GSL D++ E+ G+I ++ ++ + L F LH
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-------AVCRECLQALEF----LH 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
S++V H ++KS NIL+ + + KLT+FGF + ++ + +G +PE
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSV---KLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K K D++ GI+ +E+I G P
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 122/292 (41%), Gaps = 51/292 (17%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y + + I+ ++ SL+ LH S + I +QTA+G+ +LH +
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLH----AK 139
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF--------- 492
+ H +LKS+NI + +N + K+ +FG A+E S +F
Sbjct: 140 SIIHRDLKSNNIFLHEDNTV---KIGDFGL--------ATEKSRWSGSHQFEQLSGSILW 188
Query: 493 --PEGKRL------THKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE R+ + ++DVY FGI+L E++TG++P + ++ + MV
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IEMVGRG 241
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
S D+ V N R+ L EC ++RP +L IEE+
Sbjct: 242 SLSPDLSKVR-------SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI- 378
LGKG GS + +GA+VAVK++++ +++F +++Q+L L + + K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 379 -VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
VS+ + E ++ E+LP+G L D L R L + L Q KG+ +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY---- 126
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP-------SRKASENLAIGRSP 490
L S + H +L + NIL+ E + K+ +FG LLP R+ ++ +P
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHV---KIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + ++DV+ FG++L E+ T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI- 378
LGKG GS + +GA+VAVK++++ +++F +++Q+L L + + K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 379 -VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
VS+ ++ ++ E+LP+G L D L R L + L Q KG+ +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY---- 130
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP-------SRKASENLAIGRSP 490
L S + H +L + NIL+ E + K+ +FG LLP R+ ++ +P
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHV---KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + ++DV+ FG++L E+ T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI- 378
LGKG GS + +GA+VAVK++++ +++F +++Q+L L + + K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 379 -VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
VS+ ++ ++ E+LP+G L D L R L + L Q KG+ +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY---- 129
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP-------SRKASENLAIGRSP 490
L S + H +L + NIL+ E + K+ +FG LLP R+ ++ +P
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHV---KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + ++DV+ FG++L E+ T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 294 EDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMN 353
E P+R+ ++ FD P LGKGK G+ Y A + + +V +
Sbjct: 5 EMPKRKFTIDDFDIVRP--------------LGKGKFGNVYLAREKQNKFIMALKVLFKS 50
Query: 354 ALSKK----EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRG 409
L K+ + +++++ L+H N+ ++ ++++ ++ ++ EF P G L+ L +
Sbjct: 51 QLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-- 108
Query: 410 VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNF 469
GR + + +++ A L + H+ KV H ++K N+L+ + ++ K+ +F
Sbjct: 109 -GRFDEQRSA--TFMEELADALHYCHER----KVIHRDIKPENLLMGYKGEL---KIADF 158
Query: 470 GFLPLLPS--RKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGN 527
G+ PS R+ PE EGK K D++C G++ E + G +P SP +
Sbjct: 159 GWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG-MPPFDSPSH 217
Query: 528 NET 530
ET
Sbjct: 218 TET 220
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI- 378
LGKG GS + +GA+VAVK++++ +++F +++Q+L L + + K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 379 -VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
VS+ ++ ++ E+LP+G L D L R L + L Q KG+ +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR----LDASRLLLYSSQICKGMEY---- 142
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP-------SRKASENLAIGRSP 490
L S + H +L + NIL+ E + K+ +FG LLP R+ ++ +P
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHV---KIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + ++DV+ FG++L E+ T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G + VAVK +K ++S+ EF Q+ Q + KL H L K
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ I+ E++ NG L + L S G G P + L + +G+AF L SH+
Sbjct: 75 EYPIYIVTEYISNGCLLNYL-RSHGKGLEP---SQLLEMCYDVCEGMAF----LESHQFI 126
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ R+ + K+++FG + + ++ +PE + +
Sbjct: 127 HRDLAARNCLVDRDLCV---KVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAA 558
K+DV+ FGI++ EV + G++P + N+E +S R+ + S I
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYT-NSEVVLKVSQGHRLYRPHLASDTIY------- 235
Query: 559 REGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ C PEKRP ++L IE ++
Sbjct: 236 -----------QIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 312 FDLDDLLRASAEV------LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQM 364
D D L + EV LG+G GS YKA E+G +VA+K+V + L +E ++++
Sbjct: 18 LDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEI 75
Query: 365 QLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSII 424
++ + ++ K Y+ + I+ E+ GS+ D++ L +I+
Sbjct: 76 SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATIL 131
Query: 425 KQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL 484
+ T KGL +LH H+ ++K+ NIL+ E AKL +FG L A N
Sbjct: 132 QSTLKGLEYLHFMRKIHR----DIKAGNILLNTEG---HAKLADFGVAGQLTDXMAKRNX 184
Query: 485 AIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
IG +PE + AD++ GI +E+ G+ P
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 312 FDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKK----EFVQQMQLL 367
F +DD LGKGK G+ Y A + + +V + L K+ + +++++
Sbjct: 12 FTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 69
Query: 368 GKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQT 427
L+H N+ ++ ++++ ++ ++ EF P G L+ L + GR + + +++
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSA--TFMEEL 124
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS--RKASENLA 485
A L + H+ KV H ++K N+L+ + ++ K+ +FG+ PS R+
Sbjct: 125 ADALHYCHER----KVIHRDIKPENLLMGYKGEL---KIADFGWSVHAPSLRRRXMCGTL 177
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNET 530
PE EGK K D++C G++ E + G +P SP + ET
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG-MPPFDSPSHTET 221
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 312 FDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKK----EFVQQMQLL 367
F +DD LGKGK G+ Y A + + +V + L K+ + +++++
Sbjct: 11 FTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQ 68
Query: 368 GKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQT 427
L+H N+ ++ ++++ ++ ++ EF P G L+ L + GR + + +++
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSA--TFMEEL 123
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS--RKASENLA 485
A L + H+ KV H ++K N+L+ + ++ K+ +FG+ PS R+
Sbjct: 124 ADALHYCHER----KVIHRDIKPENLLMGYKGEL---KIADFGWSVHAPSLRRRXMCGTL 176
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNET 530
PE EGK K D++C G++ E + G +P SP + ET
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG-MPPFDSPSHTET 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L D + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 23/223 (10%)
Query: 310 PVFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQL 366
P+ D+++ + E +G+G G YKA + +G VVA+K+++ ++++ L
Sbjct: 2 PLVDMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL 59
Query: 367 LGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQ 426
L +L H N+ K++ +++ + +++EFL + L + S G IPL S + Q
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQ 115
Query: 427 TAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENL 484
+GLAF HSH+V H +LK N+LI E I KL +FG +P R + +
Sbjct: 116 LLQGLAF----CHSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEV 168
Query: 485 AI--GRSPEFPEG-KRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE G K + D++ G I E++T R PG+
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 29/219 (13%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVK-RVKNMNALSKK----EFVQQMQLLGKLKHENL 375
+VLG G G+ YK + G V + +K +N + EF+ + ++ + H +L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAF 433
+++ S +L+ + +P+G L + +HE + +G ++ L W Q AKG+ +
Sbjct: 80 VRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNWCV------QIAKGMMY 132
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP--- 490
L + ++ H +L + N+L+ N + K+T+FG LL + N G+ P
Sbjct: 133 LEE----RRLVHRDLAARNVLVKSPNHV---KITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 491 ---EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
E ++ TH++DV+ +G+ + E++T G P +G P
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L D + S G IPL S + Q +GLAF
Sbjct: 71 LDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 122
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L D + S G IPL S + Q +GLAF
Sbjct: 70 LDVIHTENKLYLVFEFL-SMDLKDFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 121
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD + S LG G G +K + + SG V+A K + + + + ++++Q+L H
Sbjct: 9 DDFEKISE--LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL----H 62
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L ++ GRIP ++SI
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSI--AVI 117
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
KGL +L + HK+ H ++K SNIL+ +I KL +FG L A+E +
Sbjct: 118 KGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDEMANEFVGTRS 171
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 23/201 (11%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G G YKA E+GA+ A K ++ + ++++ ++++L H + K++ YY
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 384 SKEEKLIIYEFLPNGSLFDLLHE-SRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ I+ EF P G++ ++ E RG+ + + +Q + L F LHS +
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNF----LHSKR 129
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGF----LPLLPSRKASENLAIGRSPEFPEGKRL 498
+ H +LK+ N+L+ E DI +L +FG L L R + +PE + +
Sbjct: 130 IIHRDLKAGNVLMTLEGDI---RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 499 T-----HKADVYCFGIILLEV 514
+KAD++ GI L+E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 297 ERRVELE-FFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMN 353
++R LE F + V +L D LG G G +K + + SG V+A K + +
Sbjct: 4 QQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK 63
Query: 354 ALSKKEFVQQMQLLGKLKHE-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRG 409
+ + ++++Q+L HE N IV FY YS E I E + GSL +L ++
Sbjct: 64 PAIRNQIIRELQVL----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-- 117
Query: 410 VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNF 469
GRIP ++SI KGL +L + HK+ H ++K SNIL+ +I KL +F
Sbjct: 118 -GRIPEQILGKVSI--AVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLCDF 168
Query: 470 GFLPLLPSRKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLEVITGRIP-GNGS 524
G L A+ + SPE +G + ++D++ G+ L+E+ GR P G+GS
Sbjct: 169 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 23/201 (11%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G G YKA E+GA+ A K ++ + ++++ ++++L H + K++ YY
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 384 SKEEKLIIYEFLPNGSLFDLLHE-SRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ I+ EF P G++ ++ E RG+ + + +Q + L F LHS +
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNF----LHSKR 137
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGF----LPLLPSRKASENLAIGRSPEFPEGKRL 498
+ H +LK+ N+L+ E DI +L +FG L L R + +PE + +
Sbjct: 138 IIHRDLKAGNVLMTLEGDI---RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 499 T-----HKADVYCFGIILLEV 514
+KAD++ GI L+E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 24/235 (10%)
Query: 295 DPERRVELE-FFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-N 351
D ++R LE F + V +L D LG G G +K + + SG V+A K +
Sbjct: 10 DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE 69
Query: 352 MNALSKKEFVQQMQLLGKLKHE-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHES 407
+ + + ++++Q+L HE N IV FY YS E I E + GSL +L ++
Sbjct: 70 IKPAIRNQIIRELQVL----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 125
Query: 408 RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLT 467
GRIP ++SI KGL +L + HK+ H ++K SNIL+ +I KL
Sbjct: 126 ---GRIPEQILGKVSI--AVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLC 174
Query: 468 NFGFLPLLPSRKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+FG L A+ + SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 175 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 114/235 (48%), Gaps = 24/235 (10%)
Query: 295 DPERRVELE-FFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-N 351
D ++R LE F + V +L D LG G G +K + + SG V+A K +
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE 104
Query: 352 MNALSKKEFVQQMQLLGKLKHE-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHES 407
+ + + ++++Q+L HE N IV FY YS E I E + GSL +L ++
Sbjct: 105 IKPAIRNQIIRELQVL----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 160
Query: 408 RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLT 467
GRIP ++SI KGL +L + HK+ H ++K SNIL+ +I KL
Sbjct: 161 ---GRIPEQILGKVSI--AVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLC 209
Query: 468 NFGFLPLLPSRKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+FG L A+ + SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 210 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 29/219 (13%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVK-RVKNMNALSKK----EFVQQMQLLGKLKHENL 375
+VLG G G+ YK + G V + +K +N + EF+ + ++ + H +L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAF 433
+++ S +L+ + +P+G L + +HE + +G ++ L W Q AKG+ +
Sbjct: 103 VRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNWCV------QIAKGMMY 155
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP--- 490
L + ++ H +L + N+L+ N + K+T+FG LL + N G+ P
Sbjct: 156 LEE----RRLVHRDLAARNVLVKSPNHV---KITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 491 ---EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
E ++ TH++DV+ +G+ + E++T G P +G P
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 324 VLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G K T + AV + + + K+ ++++QLL +L H N+ K+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
F+ K ++ E G LFD + + R + II+Q G+ ++H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHK--- 144
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGR--SPEFPEGK 496
+K+ H +LK N+L+ ++ ++ +FG S+K + + +PE G
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 203
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGS 524
K DV+ G+IL +++G P NG+
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGA 230
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 24/212 (11%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
E LG G + YK +G VA+K VK + + ++++ L+ +LKHEN+ ++
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIK----QTAKGLAFLHQ 436
+++ + +++EF+ N +SR VG P L+++K Q +GLAF H+
Sbjct: 71 VIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRG--LELNLVKYFQWQLLQGLAFCHE 126
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEF 492
+K+ H +LK N+LI + + KL +FG +P S + R+P+
Sbjct: 127 ----NKILHRDLKPQNLLINKRGQL---KLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
Query: 493 PEGKR-LTHKADVYCFGIILLEVITGR--IPG 521
G R + D++ G IL E+ITG+ PG
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 118
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 324 VLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G K T + AV + + + K+ ++++QLL +L H N+ K+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
F+ K ++ E G LFD + + R + II+Q G+ ++H+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHK--- 167
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGR--SPEFPEGK 496
+K+ H +LK N+L+ ++ ++ +FG S+K + + +PE G
Sbjct: 168 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 226
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGS 524
K DV+ G+IL +++G P NG+
Sbjct: 227 -YDEKCDVWSTGVILYILLSGCPPFNGA 253
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 118
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 75 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 126
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 495 GKRLTHKA-DVYCFGIILLEVITGR--IPGN 522
G + A D++ G I E++T R PG+
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 495 GKRLTHKA-DVYCFGIILLEVITGR--IPGN 522
G + A D++ G I E++T R PG+
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 120
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 324 VLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G K T + AV + + + K+ ++++QLL +L H N+ K+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
F+ K ++ E G LFD + + R + II+Q G+ ++H+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHK--- 168
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGR--SPEFPEGK 496
+K+ H +LK N+L+ ++ ++ +FG S+K + + +PE G
Sbjct: 169 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 227
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGS 524
K DV+ G+IL +++G P NG+
Sbjct: 228 -YDEKCDVWSTGVILYILLSGCPPFNGA 254
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
+G G G+ YK V + +V + + F ++ +L K +H N+ + Y +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMT 102
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
K+ I+ ++ SL+ LH V + I +QTA+G+ +LH + +
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLH----AKNII 154
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL------AIGRSPE---FPEG 495
H ++KS+NI + ++ K+ +FG + S+ + + +PE +
Sbjct: 155 HRDMKSNNIFL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 496 KRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEI 555
+ ++DVY +GI+L E++TG +P S NN D + +V +++ L
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELP--YSHINNR------DQIIFMVGRGYASPDL---- 259
Query: 556 LAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
++ +N + L +C E+RP ++L IE +Q
Sbjct: 260 --SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 75 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 126
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+ +GKG+ G G VAVK +KN + + F+ + ++ +L+H NL +++
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 383 YSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
++ L I+ E++ GSL D L R GR L L + + +L +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE----GN 121
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-RSPEFPEGKRLTH 500
H +L + N+L+ +N AK+++FG S + + L + +PE K+ +
Sbjct: 122 NFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 178
Query: 501 KADVYCFGIILLEVIT-GRIP 520
K+DV+ FGI+L E+ + GR+P
Sbjct: 179 KSDVWSFGILLWEIYSFGRVP 199
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+ +GKG+ G G VAVK +KN + + F+ + ++ +L+H NL +++
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 383 YSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
++ L I+ E++ GSL D L R GR L L + + +L +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE----GN 136
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-RSPEFPEGKRLTH 500
H +L + N+L+ +N AK+++FG S + + L + +PE K+ +
Sbjct: 137 NFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 193
Query: 501 KADVYCFGIILLEVIT-GRIP 520
K+DV+ FGI+L E+ + GR+P
Sbjct: 194 KSDVWSFGILLWEIYSFGRVP 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 20/201 (9%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G+G G +K ++G +VA+K+ + + KK ++++++L +LKH NL ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
+ K +++E+ + L +L RGV + SI QT + + F H+ H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAVNFCHK----H 121
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL--PSRKASENLAIG--RSPEFPEG-K 496
H ++K NILI + + I KL +FGF LL PS + +A RSPE G
Sbjct: 122 NCIHRDVKPENILITKHSVI---KLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 497 RLTHKADVYCFGIILLEVITG 517
+ DV+ G + E+++G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+ +GKG+ G G VAVK +KN + + F+ + ++ +L+H NL +++
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 383 YSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
++ L I+ E++ GSL D L R GR L L + + +L +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE----GN 308
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-RSPEFPEGKRLTH 500
H +L + N+L+ +N AK+++FG S + + L + +PE K+ +
Sbjct: 309 NFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST 365
Query: 501 KADVYCFGIILLEVIT-GRIP 520
K+DV+ FGI+L E+ + GR+P
Sbjct: 366 KSDVWSFGILLWEIYSFGRVP 386
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD + S LG G G +K + + SG V+A K + + + + ++++Q+L H
Sbjct: 6 DDFEKISE--LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL----H 59
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L ++ GRIP ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSI--AVI 114
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
KGL +L + HK+ H ++K SNIL+ +I KL +FG L A+ +
Sbjct: 115 KGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDSMANSFVGTRS 168
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 325 LGKGKVGSTYKATLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G AT+ S G +VAVK++ ++ ++ ++ +HEN+ ++ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH--QTLHSH 441
+E ++ EFL G+L D++ TR++ + A LA L LH+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQ 135
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKR 497
V H ++KS +IL+ + R KL++FGF +P RK +PE
Sbjct: 136 GVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSP 525
+ D++ GI+++E++ G P P
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEP 220
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD + S LG G G +K + + SG V+A K + + + + ++++Q+L H
Sbjct: 6 DDFEKISE--LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL----H 59
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L ++ GRIP ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSI--AVI 114
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
KGL +L + HK+ H ++K SNIL+ +I KL +FG L A+ +
Sbjct: 115 KGLTYLREK---HKIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDSMANSFVGTRS 168
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD + S LG G G +K + + SG V+A K + + + + ++++Q+L H
Sbjct: 6 DDFEKISE--LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL----H 59
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L ++ GRIP ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSI--AVI 114
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
KGL +L + HK+ H ++K SNIL+ +I KL +FG L A+ +
Sbjct: 115 KGLTYLREK---HKIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDSMANSFVGTRS 168
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD + S LG G G +K + + SG V+A K + + + + ++++Q+L H
Sbjct: 6 DDFEKISE--LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL----H 59
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L ++ GRIP ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSI--AVI 114
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
KGL +L + HK+ H ++K SNIL+ +I KL +FG L A+ +
Sbjct: 115 KGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDSMANSFVGTRS 168
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
E LG G G ++ T +G A K V + K+ +++Q + L+H L +
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
+ E ++IYEF+ G LF+ + + ++ + ++Q KGL +H+ +
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHENNYV- 277
Query: 442 KVPHANLKSSNILIF--RENDIYRAKLTNFGFLPLLPSR---KASENLAIGRSPEFPEGK 496
H +LK NI+ R N++ KL +FG L + K + A +PE EGK
Sbjct: 278 ---HLDLKPENIMFTTKRSNEL---KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
+ + D++ G++ +++G P G ++ET +R V DW+ D
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDET-------LRNVKSCDWNMD 376
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 71 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 122
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 70 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 121
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 118
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 324 VLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G K T + AV + + + K+ ++++QLL +L H N+ K+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
F+ K ++ E G LFD + + R + II+Q G+ + H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYXHK--- 144
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN---LAIGRSPEFPEGK 496
+K+ H +LK N+L+ ++ ++ +FG + K ++ A +PE G
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT 203
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGS 524
K DV+ G+IL +++G P NG+
Sbjct: 204 -YDEKCDVWSTGVILYILLSGCPPFNGA 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD + S LG G G +K + + SG V+A K + + + + ++++Q+L H
Sbjct: 6 DDFEKISE--LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL----H 59
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L ++ GRIP ++SI
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSI--AVI 114
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
KGL +L + HK+ H ++K SNIL+ +I KL +FG L A+ +
Sbjct: 115 KGLTYLRE---KHKIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDSMANSFVGTRS 168
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
SPE +G + ++D++ G+ L+E+ GR P
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 118
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 70 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 121
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 325 LGKGKVGSTYKATLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G AT+ S G +VAVK++ ++ ++ ++ +HEN+ ++ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH--QTLHSH 441
+E ++ EFL G+L D++ TR++ + A LA L LH+
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQ 144
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKR 497
V H ++KS +IL+ + R KL++FGF +P RK +PE
Sbjct: 145 GVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSP 525
+ D++ GI+++E++ G P P
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEP 229
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 120
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
E LG G G ++ T +G A K V + K+ +++Q + L+H L +
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
+ E ++IYEF+ G LF+ + + ++ + ++Q KGL +H+ +
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHENNYV- 171
Query: 442 KVPHANLKSSNILIF--RENDIYRAKLTNFGFLPLLPSR---KASENLAIGRSPEFPEGK 496
H +LK NI+ R N++ KL +FG L + K + A +PE EGK
Sbjct: 172 ---HLDLKPENIMFTTKRSNEL---KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
+ + D++ G++ +++G P G ++ET +R V DW+ D
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGE-NDDET-------LRNVKSCDWNMD 270
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 325 LGKGKVGSTYKATLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G AT+ S G +VAVK++ ++ ++ ++ +HEN+ ++ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH--QTLHSH 441
+E ++ EFL G+L D++ TR++ + A LA L LH+
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQ 146
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKR 497
V H ++KS +IL+ + R KL++FGF +P RK +PE
Sbjct: 147 GVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSP 525
+ D++ GI+++E++ G P P
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEP 231
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 120
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 71 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 122
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 325 LGKGKVGSTYKATLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G AT+ S G +VAVK++ ++ ++ ++ +HEN+ ++ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH--QTLHSH 441
+E ++ EFL G+L D++ TR++ + A LA L LH+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQ 139
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKR 497
V H ++KS +IL+ + R KL++FGF +P RK +PE
Sbjct: 140 GVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSP 525
+ D++ GI+++E++ G P P
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEP 224
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 70 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 121
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 324 VLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G K T + AV + + + K+ ++++QLL +L H N+ K+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
F+ K ++ E G LFD + + R + II+Q G+ ++H+
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVLSGITYMHK--- 150
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGR--SPEFPEGK 496
+K+ H +LK N+L+ ++ ++ +FG S+K + + +PE G
Sbjct: 151 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT 209
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGS 524
K DV+ G+IL +++G P NG+
Sbjct: 210 -YDEKCDVWSTGVILYILLSGCPPFNGA 236
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 71 LDVIHTENKLYLVFEFL-HQDLKTFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 122
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 72 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 123
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 69 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 120
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 71 LDVIHTENKLYLVFEFL-SMDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 122
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GL+F
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLSF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 69 LDVIHTENKLYLVFEFL-SMDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 120
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 42/289 (14%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
EV+G G A VA+KR+ S E ++++Q + + H N+ +
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP---LAWTTRLSIIKQTAKGLAFLHQT 437
+ K+E ++ + L GS+ D++ G L +T +I+++ +GL +LH+
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS---------RKASENLAIGR 488
H+ ++K+ NIL+ + + ++ +FG L + RK
Sbjct: 136 GQIHR----DVKAGNILLGEDGSV---QIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 489 SPEFPEGKR-LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDND-- 545
+PE E R KAD++ FGI +E+ TG P + P + + + ND
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--------LMLTLQNDPP 240
Query: 546 -WSTDILDVEILAAREGQN--EMLRLTELALECTDIAPEKRPKMSEVLR 591
T + D E+L + G++ +M+ L C PEKRP +E+LR
Sbjct: 241 SLETGVQDKEML-KKYGKSFRKMISL------CLQKDPEKRPTAAELLR 282
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 42/289 (14%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
EV+G G A VA+KR+ S E ++++Q + + H N+ +
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP---LAWTTRLSIIKQTAKGLAFLHQT 437
+ K+E ++ + L GS+ D++ G L +T +I+++ +GL +LH+
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS---------RKASENLAIGR 488
H+ ++K+ NIL+ + + ++ +FG L + RK
Sbjct: 141 GQIHR----DVKAGNILLGEDGSV---QIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 489 SPEFPEGKR-LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDND-- 545
+PE E R KAD++ FGI +E+ TG P + P + + + ND
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--------VLMLTLQNDPP 245
Query: 546 -WSTDILDVEILAAREGQN--EMLRLTELALECTDIAPEKRPKMSEVLR 591
T + D E+L + G++ +M+ L C PEKRP +E+LR
Sbjct: 246 SLETGVQDKEML-KKYGKSFRKMISL------CLQKDPEKRPTAAELLR 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 325 LGKGKVGSTYKATLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G AT+ S G +VAVK++ ++ ++ ++ +HEN+ ++ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH--QTLHSH 441
+E ++ EFL G+L D++ TR++ + A LA L LH+
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQ 189
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKR 497
V H ++KS +IL+ + R KL++FGF +P RK +PE
Sbjct: 190 GVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 498 LTHKADVYCFGIILLEVITGRIP 520
+ D++ GI+++E++ G P
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+ +++ ++++ LL +L H N+ K+
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 68 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+ +++ ++++ LL +L H N+ K+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++EFL + L + S G IPL S + Q +GLAF
Sbjct: 67 LDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAF----C 118
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
HSH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 35/251 (13%)
Query: 285 KKMPDSWSMEDPERRVELEFF--------DKTIPVFDLDDLLRASAEVLGKGKVGSTYKA 336
+K P S + +RV E F D P LD+ ++ +G+G G A
Sbjct: 116 EKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIA 170
Query: 337 TLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFL 395
T+ S G +VAVK++ ++ ++ ++ +HEN+ ++ + Y +E ++ EFL
Sbjct: 171 TVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230
Query: 396 PNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH--QTLHSHKVPHANLKSSNI 453
G+L D++ TR++ + A LA L LH+ V H ++KS +I
Sbjct: 231 EGGALTDIVTH------------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 278
Query: 454 LIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKRLTHKADVYCFGI 509
L+ + R KL++FGF +P RK +PE + D++ GI
Sbjct: 279 LLTHDG---RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGI 335
Query: 510 ILLEVITGRIP 520
+++E++ G P
Sbjct: 336 MVIEMVDGEPP 346
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+V+G G G Y+A L +SG +VA+K+V A +E +Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRY 80
Query: 381 FYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY- 137
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPE 494
+HS + H ++K N+L+ + D KL +FG L + + + R PE
Sbjct: 138 ---IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 495 ----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
T DV+ G +L E++ G+ PG+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+V+G G G Y+A L +SG +VA+K+V A +E +Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRY 80
Query: 381 FYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY- 137
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPE 494
+HS + H ++K N+L+ + D KL +FG L + + + R PE
Sbjct: 138 ---IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 192
Query: 495 ----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
T DV+ G +L E++ G+ PG+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 129/287 (44%), Gaps = 42/287 (14%)
Query: 323 EVLGKGKVGSTYKATLESGA-----VVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLA 376
+V+G G+ G YK L++ + VA+K +K + +F+ + ++G+ H N+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + +II E++ NG+L L E G + + +++ A G+ +L
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLAN 165
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-KASENLAIGR------S 489
+ H+ +L + NIL+ N K+++FG +L +A+ + G+ +
Sbjct: 166 MNYVHR----DLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 218
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
PE ++ T +DV+ FGI++ EV+T N+E ++D R+ D +
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSA 278
Query: 550 ILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
I +L ++C +RPK ++++ ++++
Sbjct: 279 IY------------------QLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+V+G G G Y+A L +SG +VA+K+V A +E +Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRY 80
Query: 381 FYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY- 137
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPE 494
+HS + H ++K N+L+ + D KL +FG L + + + R PE
Sbjct: 138 ---IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPE 192
Query: 495 ----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
T DV+ G +L E++ G+ PG+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G G YKA + +V+A +V + + + ++++ ++ +L H N+ K++ +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ I+ EF G++ ++ E PL + + KQT L +LH +K+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH----DNKI 156
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF-----PE 494
H +LK+ NIL + DI KL +FG + IG +PE +
Sbjct: 157 IHRDLKAGNILFTLDGDI---KLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 495 GKRLTHKADVYCFGIILLEV 514
+ +KADV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 325 LGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQ-MQLLGKLKHENLAKIVSFY 382
+GKG G YK + VVA+K + A + E +QQ + +L + + + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ II E+L GS DLL PL T +I+++ KGL +LH S +
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIATILREILKGLDYLH----SER 136
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGKRL 498
H ++K++N+L+ + D+ KL +FG L + N +G +PE +
Sbjct: 137 KIHRDIKAANVLLSEQGDV---KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 499 THKADVYCFGIILLEVITGRIPGN 522
KAD++ GI +E+ G P +
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNS 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 76
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 128
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 129 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 237
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 238 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 26/206 (12%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+ +GKG+ G G VAVK +KN + + F+ + ++ +L+H NL +++
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 383 YSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
++ L I+ E++ GSL D L R GR L L + + +L +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLE----GN 127
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---EFPEGKR- 497
H +L + N+L+ +N AK+++FG +++AS G+ P PE R
Sbjct: 128 NFVHRDLAARNVLVSEDN---VAKVSDFGL-----TKEASSTQDTGKLPVKWTAPEALRE 179
Query: 498 --LTHKADVYCFGIILLEVIT-GRIP 520
+ K+DV+ FGI+L E+ + GR+P
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 123
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 124 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 232
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 233 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 323 EVLGKGKVGSTYKATL----ESGAV-VAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E+ + VA+K ++ N + + KE + + ++ + ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+++ + +L+ + +P G L D + E+RG L L+ Q AKG+++L
Sbjct: 83 RLLGICLTSTVQLVT-QLMPYGCLLDHVRENRG----RLGSQDLLNWCMQIAKGMSYLED 137
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP------ 490
++ H +L + N+L+ N + K+T+FG LL + + G+ P
Sbjct: 138 V----RLVHRDLAARNVLVKSPNHV---KITDFGLARLLDIDETEYHADGGKVPIKWMAL 190
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGN 527
E +R TH++DV+ +G+ + E++T G P +G P
Sbjct: 191 ESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR 228
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 76
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 128
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 129 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 237
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 238 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G G YKA + +V+A +V + + + ++++ ++ +L H N+ K++ +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ I+ EF G++ ++ E PL + + KQT L +LH +K+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH----DNKI 156
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF-----PE 494
H +LK+ NIL + DI KL +FG + IG +PE +
Sbjct: 157 IHRDLKAGNILFTLDGDI---KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 495 GKRLTHKADVYCFGIILLEV 514
+ +KADV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 73
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 125
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 126 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 234
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 235 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 21/200 (10%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G G YKA + +V+A +V + + + ++++ ++ +L H N+ K++ +Y
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ I+ EF G++ ++ E PL + + KQT L +LH +K+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH----DNKI 156
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF-----PE 494
H +LK+ NIL + DI KL +FG + IG +PE +
Sbjct: 157 IHRDLKAGNILFTLDGDI---KLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 495 GKRLTHKADVYCFGIILLEV 514
+ +KADV+ GI L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 312 FDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKK----EFVQQMQLL 367
F +DD LGKGK G+ Y A + + +V + + K+ + +++++
Sbjct: 20 FTIDDF--EIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 368 GKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQT 427
L H N+ ++ +++Y + +I E+ P G L+ L +S A +I+++
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA-----TIMEEL 132
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS--RKASENLA 485
A L + H KV H ++K N+L+ + + K+ +FG+ PS RK
Sbjct: 133 ADALMY----CHGKKVIHRDIKPENLLLGLKGE---LKIADFGWSVHAPSLRRKTMCGTL 185
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNET 530
PE EG+ K D++C G++ E++ G P S +NET
Sbjct: 186 DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE-SASHNET 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 380 SFYYSK-EEKLIIY-----EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS E+K ++Y +++P H SR +P+ + + Q + LA+
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 137
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 138 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 137
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 138 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKE------FVQQMQLLGKLKHENLA 376
E +G+G G YKA G A+K+++ L K++ ++++ +L +LKH N+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ ++K+ ++++E L + L LL G L T S + Q G+A+
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAY--- 115
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEF 492
H +V H +LK N+LI RE ++ K+ +FG +P RK + + R+P+
Sbjct: 116 -CHDRRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 493 PEG-KRLTHKADVYCFGIILLEVITG 517
G K+ + D++ G I E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 92
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 150
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 151 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 204
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 87
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 145
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 146 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 199
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 149
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 150 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 137
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 138 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 98
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 156
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 157 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 210
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 107
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 165
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 166 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 219
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 80
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 138
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 139 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 192
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 84
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 142
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 143 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 196
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 171
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 172 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 225
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 98
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 150
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 151 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 259
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 260 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKE------FVQQMQLLGKLKHENLA 376
E +G+G G YKA G A+K+++ L K++ ++++ +L +LKH N+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ ++K+ ++++E L + L LL G L T S + Q G+A+
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAY--- 115
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEF 492
H +V H +LK N+LI RE ++ K+ +FG +P RK + + R+P+
Sbjct: 116 -CHDRRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 493 PEG-KRLTHKADVYCFGIILLEVITG 517
G K+ + D++ G I E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKE------FVQQMQLLGKLKHENLA 376
E +G+G G YKA G A+K+++ L K++ ++++ +L +LKH N+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIR----LEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ ++K+ ++++E L + L LL G L T S + Q G+A+
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEG----GLESVTAKSFLLQLLNGIAY--- 115
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEF 492
H +V H +LK N+LI RE ++ K+ +FG +P RK + + R+P+
Sbjct: 116 -CHDRRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 493 PEG-KRLTHKADVYCFGIILLEVITG 517
G K+ + D++ G I E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++E + + L + S G IPL S + Q +GLAF H
Sbjct: 67 LDVIHTENKLYLVFEHV-HQDLKTFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 119
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
SH+V H +LK N+LI E I KL +FG +P R + + R+PE
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 79
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 137
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 138 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGNG 523
E T DV+ G +L E++ G+ PG+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 99
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 151
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 152 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 260
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 261 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKH 372
DD R S LG G G K SG ++A K + + + + ++++Q+L H
Sbjct: 16 DDFERISE--LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL----H 69
Query: 373 E-NLAKIVSFY---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
E N IV FY YS E I E + GSL +L E++ RIP ++SI
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSI--AVL 124
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
+GLA+L + H++ H ++K SNIL+ +I KL +FG L A+ +
Sbjct: 125 RGLAYLRE---KHQIMHRDVKPSNILVNSRGEI---KLCDFGVSGQLIDSMANSFVGTRS 178
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+PE +G + ++D++ G+ L+E+ GR P
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 91
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 149
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 150 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 83
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 141
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 142 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 195
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 113
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 171
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 172 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 225
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 323 EVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQ-MQLLGKLKHENLAKIVS 380
E +GKG G +K + VVA+K + A + E +QQ + +L + + K
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
Y + II E+L GS DLL P +++K+ KGL +LH S
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKGLDYLH----S 138
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
K H ++K++N+L+ + D+ KL +FG L + N +G +PE +
Sbjct: 139 EKKIHRDIKAANVLLSEQGDV---KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
KAD++ GI +E+ G P
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPP 219
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 115
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 173
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 174 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 227
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 117
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 175
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 176 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 229
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 322 AEVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKIV 379
+V+G G G Y+A L +SG +VA+K+V L K F +++Q++ KL H N+ ++
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLR 158
Query: 380 SFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
F+YS EK ++ +++P H SR +P+ + + Q + LA+
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRSLAY 216
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFP 493
+HS + H ++K N+L+ + D KL +FG L + + + R P
Sbjct: 217 ----IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 270
Query: 494 E----GKRLTHKADVYCFGIILLEVITGR--IPGN 522
E T DV+ G +L E++ G+ PG+
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 323 EVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQ-MQLLGKLKHENLAKIVS 380
E +GKG G +K + VVA+K + A + E +QQ + +L + + K
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
Y + II E+L GS DLL PL T +I+++ KGL + LHS
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDY----LHS 137
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
K H ++K++N+L+ ++ KL +FG L + N +G +PE +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEV---KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
KAD++ GI +E+ G P
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKI 378
E +G+G G YKA + +G VVA+K+++ ++++ LL +L H N+ K+
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +++ + +++E + + L + S G IPL S + Q +GLAF H
Sbjct: 71 LDVIHTENKLYLVFEHV-DQDLKKFMDASALTG-IPLPLIK--SYLFQLLQGLAFCH--- 123
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
SH+V H +LK N+LI E I KL +FG +P R + R+PE
Sbjct: 124 -SHRVLHRDLKPQNLLINTEGAI---KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 495 G-KRLTHKADVYCFGIILLEVITGR--IPGN 522
G K + D++ G I E++T R PG+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 323 EVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQ-MQLLGKLKHENLAKIVS 380
E +GKG G +K + VVA+K + A + E +QQ + +L + + K
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
Y + II E+L GS DLL PL T +I+++ KGL + LHS
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDY----LHS 142
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
K H ++K++N+L+ ++ KL +FG L + N +G +PE +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEV---KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 199
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
KAD++ GI +E+ G P
Sbjct: 200 AYDSKADIWSLGITAIELARGEPP 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 320 ASAEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
+ E+LG G+ G +K +G +A K +K K+E ++ ++ +L H NL ++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFD-LLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ SK + +++ E++ G LFD ++ ES + + + +KQ +G+ +HQ
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT-----ILFMKQICEGIRHMHQM 206
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKASENLAIGR--SPEFPE 494
+ H +LK NIL D + K+ +FG P K N +PE
Sbjct: 207 Y----ILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 495 GKRLTHKADVYCFGIILLEVITGRIP 520
++ D++ G+I +++G P
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 325 LGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQ-------LLGKLKHENLA 376
+GKG G +K L + +VVA+K + ++ + E +++ Q ++ L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ ++ ++ EF+P G L+ L + P+ W+ +L ++ A G+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN 140
Query: 437 TLHSHKVPHANLKSSNILI--FRENDIYRAKLTNFGFLPLLPSRKASENLA--IGR---- 488
+ + H +L+S NI + EN AK+ +FG S+++ +++ +G
Sbjct: 141 --QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVSGLLGNFQWM 193
Query: 489 SPEF--PEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDW 546
+PE E + T KAD Y F +IL ++TG P +E S ++ M+ +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGP------FDEYSYGKIKFINMIREEGL 247
Query: 547 STDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
I ++ RL + C P+KRP S +++ + E+
Sbjct: 248 RPTI----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 324 VLGKGKVGSTYKA-TLESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
++G+G G K ++G +VA+K+ + + + KK +++++LL +L+HENL ++
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
K+ +++EF+ + L DL G L + + Q G+ F HS
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGF----CHS 142
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL--PSRKASENLAIG--RSPEFPEGK 496
H + H ++K NIL+ + + KL +FGF L P + +A R+PE G
Sbjct: 143 HNIIHRDIKPENILVSQSGVV---KLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 497 RLTHKA-DVYCFGIILLEVITGR--IPGN 522
KA DV+ G ++ E+ G PG+
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE-NLAKIVS 380
E++G G G YK +++G + A+K V ++ ++E Q++ +L K H N+A
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIK-VMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 381 FYYSK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ K ++ ++ EF GS+ DL+ ++G + W I ++ +GL+ L
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIA--YICREILRGLSHL 145
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SP 490
HQ HKV H ++K N+L+ ++ KL +FG L N IG +P
Sbjct: 146 HQ----HKVIHRDIKGQNVLLTENAEV---KLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 491 EF---PEGKRLTH--KADVYCFGIILLEVITGRIP 520
E E T+ K+D++ GI +E+ G P
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 323 EVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQ-MQLLGKLKHENLAKIVS 380
E +GKG G +K + VVA+K + A + E +QQ + +L + + K
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
Y + II E+L GS DLL PL T +I+++ KGL + LHS
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDY----LHS 122
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
K H ++K++N+L+ ++ KL +FG L + N +G +PE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEV---KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
KAD++ GI +E+ G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 323 EVLGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQ-MQLLGKLKHENLAKIVS 380
E +GKG G +K + VVA+K + A + E +QQ + +L + + K
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
Y + II E+L GS DLL PL T +I+++ KGL + LHS
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKGLDY----LHS 122
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
K H ++K++N+L+ ++ KL +FG L + N +G +PE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEV---KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
KAD++ GI +E+ G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSK---KEFVQQMQLLGKLKHENLAKIV 379
E +G+G G YKA G +VA+KR++ ++A + ++++ LL +L H N+ ++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+S+ +++EF+ L +L E+ + L + + Q +G+A HQ
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQ--- 137
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPEG 495
H++ H +LK N+LI + + KL +FG +P R + + R+P+ G
Sbjct: 138 -HRILHRDLKPQNLLINSDGAL---KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 496 -KRLTHKADVYCFGIILLEVITGR--IPG 521
K+ + D++ G I E+ITG+ PG
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMN----ALSKKEFVQQMQLLGKLKHENLAKI 378
E++G G G Y+A G VAVK ++ + + + Q+ +L LKH N+ +
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ ++ EF G L +L R I + W Q A+G+ +LH
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV------QIARGMNYLHD-- 123
Query: 439 HSHKVP--HANLKSSNILIFRE-------NDIYRAKLTNFGFLPLL--PSRKASENLAIG 487
VP H +LKSSNILI ++ N I K+T+FG ++ ++
Sbjct: 124 -EAIVPIIHRDLKSSNILILQKVENGDLSNKIL--KITDFGLAREWHRTTKMSAAGAYAW 180
Query: 488 RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+PE + +DV+ +G++L E++TG +P G G
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG 219
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 51/290 (17%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 123
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF--------- 492
+ H +LKS+NI + + + K+ +FG A+E S +F
Sbjct: 124 SIIHRDLKSNNIFLHEDLTV---KIGDFGL--------ATEKSRWSGSHQFEQLSGSILW 172
Query: 493 --PEGKRLTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE R+ K +DVY FGI+L E++TG++P + ++ + MV
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRG 225
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
S D+ V N + L EC ++RP ++L IE
Sbjct: 226 YLSPDLSKVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSK---KEFVQQMQLLGKLKHENLAKIV 379
E +G+G G YKA G +VA+KR++ ++A + ++++ LL +L H N+ ++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+S+ +++EF+ L +L E+ + L + + Q +G+A HQ
Sbjct: 86 DVIHSERCLTLVFEFM-EKDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQ--- 137
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPEG 495
H++ H +LK N+LI + + KL +FG +P R + + R+P+ G
Sbjct: 138 -HRILHRDLKPQNLLINSDGAL---KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 496 -KRLTHKADVYCFGIILLEVITGR--IPG 521
K+ + D++ G I E+ITG+ PG
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPG 222
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 127
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
H +L + N L+ ND K+++FG + S + S+ PE + +
Sbjct: 128 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 51/290 (17%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 91
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 143
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF--------- 492
+ H +LKS+NI + + + K+ +FG A+E S +F
Sbjct: 144 SIIHRDLKSNNIFLHEDLTV---KIGDFGL--------ATEKSRWSGSHQFEQLSGSILW 192
Query: 493 --PEGKRLTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE R+ K +DVY FGI+L E++TG++P + ++ + MV
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRG 245
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
S D+ V N + L EC ++RP ++L IE
Sbjct: 246 YLSPDLSKVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 288
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 342
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
NL + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 343 ---NLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 439
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 440 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 51/290 (17%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 99
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y +K + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 151
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF--------- 492
+ H +LKS+NI + + + K+ +FG A+E S +F
Sbjct: 152 SIIHRDLKSNNIFLHEDLTV---KIGDFGL--------ATEKSRWSGSHQFEQLSGSILW 200
Query: 493 --PEGKRLTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE R+ K +DVY FGI+L E++TG++P + ++ + MV
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRG 253
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
S D+ V N + L EC ++RP ++L IE
Sbjct: 254 YLSPDLSKVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 135/302 (44%), Gaps = 40/302 (13%)
Query: 305 FDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEF 360
D + P +D ++ R + LG G+ G Y+ + ++ VAVK +K + + +EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF 61
Query: 361 VQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR 420
+++ ++ ++KH NL +++ + II EF+ G+L D L E R ++
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---CNRQEVSAVVL 118
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKA 480
L + Q + + +L + H+ +L + N L+ EN + K+ +FG L+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHR----DLAARNCLV-GENHL--VKVADFGLSRLMTGDTY 171
Query: 481 SENLAIG-----RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDL 534
+ + +PE + + K+DV+ FG++L E+ T G P G DL
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DL 223
Query: 535 SDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
S V +++ D+ + EG E ++ EL C P RP +E+ + E
Sbjct: 224 SQ-VYELLEKDYR--------MERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
Query: 595 EI 596
+
Sbjct: 273 TM 274
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 37/283 (13%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+ +G G G+ YK V + V + F ++ +L K +H N+ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
Y + + I+ ++ SL+ LH + + I +QTA+G+ +LH +
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLH----AK 123
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS----ENLAIGRSPEFPEGKR 497
+ H +LKS+NI + + + K+ +FG L + SR + E L+ PE R
Sbjct: 124 SIIHRDLKSNNIFLHEDLTV---KIGDFG-LATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 498 LTHK------ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+ K +DVY FGI+L E++TG++P + ++ + MV S D+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-------IFMVGRGYLSPDLS 232
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
V N + L EC ++RP ++L IE
Sbjct: 233 KVR-------SNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
Query: 343 VVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFD 402
+ + R +++ S + ++++ +L L H N+ K+ F+ K ++ E G LFD
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 403 LLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIY 462
+ + R+ IIKQ G+ +LH+ H + H +LK N+L+ +
Sbjct: 126 EI-----IHRMKFNEVDAAVIIKQVLSGVTYLHK----HNIVHRDLKPENLLLESKEKDA 176
Query: 463 RAKLTNFGFLPLLPS-RKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLEVITGRI 519
K+ +FG + + +K E L +PE K+ K DV+ G+IL ++ G
Sbjct: 177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP 235
Query: 520 PGNG 523
P G
Sbjct: 236 PFGG 239
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 306 DKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFV 361
D + P +D ++ R + LG G+ G Y+ + ++ VAVK +K + + +EF+
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRL 421
++ ++ ++KH NL +++ + II EF+ G+L D L E R + L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLL 119
Query: 422 SIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS 481
+ Q + + +L + H+ +L + N L+ EN + K+ +FG L+ +
Sbjct: 120 YMATQISSAMEYLEKKNFIHR----DLAARNCLV-GENHL--VKVADFGLSRLMTGDTXT 172
Query: 482 ENLAIG-----RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLS 535
+ +PE + + K+DV+ FG++L E+ T G P G DLS
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLS 224
Query: 536 DWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
V +++ D+ + EG E ++ EL C P RP +E+ + E
Sbjct: 225 Q-VYELLEKDYR--------MERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 596 I 596
+
Sbjct: 274 M 274
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 131/290 (45%), Gaps = 47/290 (16%)
Query: 325 LGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQ-------LLGKLKHENLA 376
+GKG G +K L + +VVA+K + ++ + E +++ Q ++ L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ ++ ++ EF+P G L+ L + P+ W+ +L ++ A G+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN 140
Query: 437 TLHSHKVPHANLKSSNILI--FRENDIYRAKLTNFGFLPLLPSRKASENLA--IGR---- 488
+ + H +L+S NI + EN AK+ +FG S+++ +++ +G
Sbjct: 141 --QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWM 193
Query: 489 SPEF--PEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDW 546
+PE E + T KAD Y F +IL ++TG P +E S ++ M+ +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGP------FDEYSYGKIKFINMIREEGL 247
Query: 547 STDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
I ++ RL + C P+KRP S +++ + E+
Sbjct: 248 RPTI----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 306 DKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFV 361
D + P +D ++ R + LG G+ G Y+ + ++ VAVK +K + + +EF+
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRL 421
++ ++ ++KH NL +++ + II EF+ G+L D L E R + L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLL 119
Query: 422 SIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS 481
+ Q + + +L + H+ +L + N L+ EN + K+ +FG L+ +
Sbjct: 120 YMATQISSAMEYLEKKNFIHR----DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYT 172
Query: 482 ENLAIG-----RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLS 535
+ +PE + + K+DV+ FG++L E+ T G P G DLS
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLS 224
Query: 536 DWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
V +++ D+ + EG E ++ EL C P RP +E+ + E
Sbjct: 225 Q-VYELLEKDYR--------MERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 596 I 596
+
Sbjct: 274 M 274
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 306 DKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFV 361
D + P +D ++ R + LG G+ G Y+ + ++ VAVK +K + + +EF+
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFL 62
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRL 421
++ ++ ++KH NL +++ + II EF+ G+L D L E R + L
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE---CNRQEVNAVVLL 119
Query: 422 SIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP----S 477
+ Q + + +L + H+ +L + N L+ EN + K+ +FG L+ +
Sbjct: 120 YMATQISSAMEYLEKKNFIHR----DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYT 172
Query: 478 RKASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLS 535
A I +PE + + K+DV+ FG++L E+ T G P G DLS
Sbjct: 173 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLS 224
Query: 536 DWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
V +++ D+ + EG E ++ EL C P RP +E+ + E
Sbjct: 225 Q-VYELLEKDYR--------MERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 596 I 596
+
Sbjct: 274 M 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 323 EVLGKGKVGSTYKATLESG----AVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENLAK 377
EV+G G+ G + L++ + VA+K +K ++EF+ + ++G+ +H N+ +
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + +I+ EF+ NG+L L + G + + +++ A G+ +L +
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAEM 137
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIG-------R 488
+ H+ +L + NIL+ N K+++FG L S +E ++G
Sbjct: 138 SYVHR----DLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE ++ T +D + +GI++ EV++
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 136 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 232
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 233 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 136 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 232
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 233 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 134/302 (44%), Gaps = 40/302 (13%)
Query: 305 FDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEF 360
D + P +D ++ R + LG G+ G Y+ + ++ VAVK +K + + +EF
Sbjct: 3 MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEF 61
Query: 361 VQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR 420
+++ ++ ++KH NL +++ + II EF+ G+L D L E R +
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVL 118
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKA 480
L + Q + + +L + H+ +L + N L+ EN + K+ +FG L+
Sbjct: 119 LYMATQISSAMEYLEKKNFIHR----DLAARNCLV-GENHL--VKVADFGLSRLMTGDTY 171
Query: 481 SENLAIG-----RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDL 534
+ + +PE + + K+DV+ FG++L E+ T G P G DL
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DL 223
Query: 535 SDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIE 594
S V +++ D+ + EG E ++ EL C P RP +E+ + E
Sbjct: 224 SQ-VYELLEKDYR--------MERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
Query: 595 EI 596
+
Sbjct: 273 TM 274
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 323 EVLGK-GKVGSTYKATLESGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVS 380
E++G+ G G YKA + +V+A +V + + + ++++ ++ +L H N+ K++
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+Y + I+ EF G++ ++ E PL + + KQT L +LH
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVVCKQTLDALNYLH----D 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGF-----LPLLPSRKASENLAIGRSPEF--- 492
+K+ H +LK+ NIL + DI KL +FG + R + +PE
Sbjct: 127 NKIIHRDLKAGNILFTLDGDI---KLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 493 --PEGKRLTHKADVYCFGIILLEV 514
+ + +KADV+ GI L+E+
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 133
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 134 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G +D ++L+ +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPG------------------IDPSQVYELLEKDYRM 229
Query: 558 AR-EGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
R EG E ++ EL C P RP +E+ + E +
Sbjct: 230 ERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 126
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
H +L + N L+ ND K+++FG + S S+ PE + +
Sbjct: 127 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 224
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 54/263 (20%)
Query: 325 LGKGKVGS----TYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G Y T + +G +VAVK +K + + + Q++ +L L HE++ K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 379 VSFYYSKEEK--LIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ EK ++ E++P GSL D L S G+ ++ L +Q +G+A+LH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLH 134
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-------RKASENLAIGR 488
S H NL + N+L+ +ND K+ +FG +P R+ ++
Sbjct: 135 ----SQHYIHRNLAARNVLL--DNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
+PE + + + +DV+ FG+ L E++T D+ S
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLTH------------------------CDSSQSP 223
Query: 549 DILDVEILAAREGQNEMLRLTEL 571
+E++ +GQ +LRLTEL
Sbjct: 224 PTKFLELIGIAQGQMTVLRLTEL 246
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 136 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 232
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 233 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKK----NF 336
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
H NL + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 337 IHRNLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 436
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 437 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 124/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKK----NF 378
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
H NL + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 379 IHRNLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 478
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 479 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
LL S +G+G G A + SG VAVK + ++ ++ ++ +H N+
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ Y EE ++ EFL G+L D++ + R L ++ + + LA+
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQIATVCEAVLQALAY-- 156
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL----PSRKASENLAIGRSPE 491
LH+ V H ++KS +IL+ + R KL++FGF + P RK +PE
Sbjct: 157 --LHAQGVIHRDIKSDSILLTLDG---RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE 211
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
+ D++ GI+++E++ G P
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 122
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRLT 499
H +L + N L+ ND K+++FG + + + ++ PE + +
Sbjct: 123 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 18/206 (8%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G AT +G VAVK++ ++ ++ ++ H+N+ + S Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+E ++ EFL G+L D++ +R + +A T LS++ + L++ LH+ V
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR-MNEEQIA-TVCLSVL----RALSY----LHNQGV 162
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPL----LPSRKASENLAIGRSPEFPEGKRLT 499
H ++KS +IL+ + R KL++FGF +P RK +PE
Sbjct: 163 IHRDIKSDSILLTSDG---RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 500 HKADVYCFGIILLEVITGRIPGNGSP 525
+ D++ GI+++E+I G P P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPYFNEP 245
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 136 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 232
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 233 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 127
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
H +L + N L+ ND K+++FG + S S+ PE + +
Sbjct: 128 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 225
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 39/280 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 133
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 134 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G +D ++L+ +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPG------------------IDPSQVYELLEKDYRM 229
Query: 558 AR-EGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
R EG E ++ EL C P RP +E+ + E +
Sbjct: 230 ERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 40/244 (16%)
Query: 306 DKTI-PVFDLDDLLRASAEVLGKGKVGSTYKATLESGAV---VAVKRVKNMNALS-KKEF 360
D TI PV D +D+ +V+G+G G KA ++ + A+KR+K + ++F
Sbjct: 12 DPTIYPVLDWNDI--KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 69
Query: 361 VQQMQLLGKLKHENLAKIVSFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIP--- 414
++++L KL H I++ + E + +Y E+ P+G+L D L +SR + P
Sbjct: 70 AGELEVLCKLGHH--PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 127
Query: 415 --------LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKL 466
L+ L A+G+ +L Q + H NL + NIL+ + Y AK+
Sbjct: 128 IANSTASTLSSQQLLHFAADVARGMDYLSQK----QFIHRNLAARNILV---GENYVAKI 180
Query: 467 TNFGFLPLLPSRKASENLAIGRSP------EFPEGKRLTHKADVYCFGIILLEVIT-GRI 519
+FG L ++ +GR P E T +DV+ +G++L E+++ G
Sbjct: 181 ADFG---LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 237
Query: 520 PGNG 523
P G
Sbjct: 238 PYCG 241
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 142
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS-------PEFPEGKR 497
H +L + N L+ ND K+++FG + + E ++G PE +
Sbjct: 143 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE--ETSSVGSKFPVRWSPPEVLMYSK 197
Query: 498 LTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
+ K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 240
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 122 LSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPPFNQ--TSLIDFNVSYNNLDGPIPQ 179
L N S IP DL L L+L N LDG+IP T L + ++S NNL GPIP+
Sbjct: 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Query: 180 TRVVQSFPSSSFEHNSGLCGRPLEK 204
++FP + F +N GLCG PL +
Sbjct: 723 MGQFETFPPAKFLNNPGLCGYPLPR 747
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 115 VNLETVFLSQNHFSDGIPFGYIDLPK--LKKLELQENYLDGQIPPF--NQTSLIDFNVSY 170
+L T+ LS N+FS I PK L++L LQ N G+IPP N + L+ ++S+
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 171 NNLDGPIPQT 180
N L G IP +
Sbjct: 428 NYLSGTIPSS 437
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 23/88 (26%)
Query: 115 VNLETVFLSQNHFSDGIPF-------GYIDLP----------------KLKKLELQENYL 151
VNLE + +S N+FS GIPF ++D+ +LK L + N
Sbjct: 200 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 152 DGQIPPFNQTSLIDFNVSYNNLDGPIPQ 179
G IPP SL +++ N G IP
Sbjct: 260 VGPIPPLPLKSLQYLSLAENKFTGEIPD 287
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 117 LETVFLSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPP--FNQTSLIDFNVSYNNLD 174
L ++ LS N+ S IP L KL+ L+L N L+G+IP +L + +N+L
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479
Query: 175 GPIPQ 179
G IP
Sbjct: 480 GEIPS 484
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 117 LETVFLSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPPF--NQTSLIDFNVSYNNLD 174
LET+ L N + IP G + L + L N L G+IP + +L +S N+
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 175 GPIP 178
G IP
Sbjct: 528 GNIP 531
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 116 NLETVFLSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPP--FNQTSLIDFN 167
NL + LS N FS IP D L L+L N +G IP F Q+ I N
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 136
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 137 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 233
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 234 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 53/252 (21%)
Query: 310 PVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQL--L 367
P DLD+L E++G+G+ G+ YK +L+ V VK + +++ F+ + + +
Sbjct: 8 PSLDLDNL--KLLELIGRGRYGAVYKGSLDERPVA----VKVFSFANRQNFINEKNIYRV 61
Query: 368 GKLKHENLAKIV-----SFYYSKEEKLIIYEFLPNGSLFDL--LHESRGVGRIPLAWTTR 420
++H+N+A+ + + E L++ E+ PNGSL LH S W +
Sbjct: 62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--------DWVSS 113
Query: 421 LSIIKQTAKGLAFLHQTL-----HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL 475
+ +GLA+LH L + + H +L S N+L+ +ND +++FG L
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV--KND-GTCVISDFGLSMRL 170
Query: 476 PSRK-----ASENLAIGR-------SPEFPEG-------KRLTHKADVYCFGIILLEVI- 515
+ +N AI +PE EG + + D+Y G+I E+
Sbjct: 171 TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
Query: 516 --TGRIPGNGSP 525
T PG P
Sbjct: 231 RCTDLFPGESVP 242
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 122 LSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPPFNQ--TSLIDFNVSYNNLDGPIPQ 179
L N S IP DL L L+L N LDG+IP T L + ++S NNL GPIP+
Sbjct: 660 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Query: 180 TRVVQSFPSSSFEHNSGLCGRPLEK 204
++FP + F +N GLCG PL +
Sbjct: 720 MGQFETFPPAKFLNNPGLCGYPLPR 744
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 115 VNLETVFLSQNHFSDGIPFGYIDLPK--LKKLELQENYLDGQIPPF--NQTSLIDFNVSY 170
+L T+ LS N+FS I PK L++L LQ N G+IPP N + L+ ++S+
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 171 NNLDGPIPQT 180
N L G IP +
Sbjct: 425 NYLSGTIPSS 434
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 23/88 (26%)
Query: 115 VNLETVFLSQNHFSDGIPF-------GYIDLP----------------KLKKLELQENYL 151
VNLE + +S N+FS GIPF ++D+ +LK L + N
Sbjct: 197 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 152 DGQIPPFNQTSLIDFNVSYNNLDGPIPQ 179
G IPP SL +++ N G IP
Sbjct: 257 VGPIPPLPLKSLQYLSLAENKFTGEIPD 284
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 117 LETVFLSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPP--FNQTSLIDFNVSYNNLD 174
L ++ LS N+ S IP L KL+ L+L N L+G+IP +L + +N+L
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 476
Query: 175 GPIPQ 179
G IP
Sbjct: 477 GEIPS 481
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 117 LETVFLSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPPF--NQTSLIDFNVSYNNLD 174
LET+ L N + IP G + L + L N L G+IP + +L +S N+
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 175 GPIP 178
G IP
Sbjct: 525 GNIP 528
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 116 NLETVFLSQNHFSDGIPFGYIDLPKLKKLELQENYLDGQIPP--FNQTSLIDFN 167
NL + LS N FS IP D L L+L N +G IP F Q+ I N
Sbjct: 512 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 54/263 (20%)
Query: 325 LGKGKVGS----TYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G Y T + +G +VAVK +K + + + Q++ +L L HE++ K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 379 VSFYYSKEEK--LIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ EK ++ E++P GSL D L S G+ ++ L +Q +G+A+LH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLH 134
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-------RKASENLAIGR 488
+ H+ NL + N+L+ +ND K+ +FG +P R+ ++
Sbjct: 135 AQHYIHR----NLAARNVLL--DNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
+PE + + + +DV+ FG+ L E++T D+ S
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLTH------------------------CDSSQSP 223
Query: 549 DILDVEILAAREGQNEMLRLTEL 571
+E++ +GQ +LRLTEL
Sbjct: 224 PTKFLELIGIAQGQMTVLRLTEL 246
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 139
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 140 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 236
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 237 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 39/280 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R ++ L + Q + + +L + H+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR- 133
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLP----SRKASENLAIG-RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + A I +PE +
Sbjct: 134 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G +D ++L+ +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPG------------------IDPSQVYELLEKDYRM 229
Query: 558 AR-EGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
R EG E ++ EL C P RP +E+ + E +
Sbjct: 230 ERPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 133
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
H +L + N L+ ND K+++FG + S S+ PE + +
Sbjct: 134 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 136 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 232
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 233 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
LG G+ G VA+K +K ++S+ EF+++ +++ L HE L ++
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 385 KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
+ II E++ NG L + L E R + L + K + + + L S +
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT----QQLLEMCKDVCEAMEY----LESKQFL 142
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLL-----PSRKASENLAIGRSPEFPEGKRLT 499
H +L + N L+ ND K+++FG + S S+ PE + +
Sbjct: 143 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
K+D++ FG+++ E+ + G++P N+ET+ ++ +R+
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRL 240
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 135
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 136 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 232
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 233 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 47/290 (16%)
Query: 325 LGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQ-------LLGKLKHENLA 376
+GKG G +K L + +VVA+K + ++ + E +++ Q ++ L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ ++ ++ EF+P G L+ L + P+ W+ +L ++ A G+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQN 140
Query: 437 TLHSHKVPHANLKSSNILI--FRENDIYRAKLTNFGFLPLLPSRKASENLA--IGR---- 488
+ + H +L+S NI + EN AK+ +F S+++ +++ +G
Sbjct: 141 --QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQQSVHSVSGLLGNFQWM 193
Query: 489 SPEF--PEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDW 546
+PE E + T KAD Y F +IL ++TG P +E S ++ M+ +
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGP------FDEYSYGKIKFINMIREEGL 247
Query: 547 STDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
I ++ RL + C P+KRP S +++ + E+
Sbjct: 248 RPTI----------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 148
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 149 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 245
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 246 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 137
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 138 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 234
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 235 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 137
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE +
Sbjct: 138 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 234
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 235 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 136
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLP----SRKASENLAIG-RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + A I +PE +
Sbjct: 137 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 233
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 234 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 37/279 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y+ + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ II EF+ G+L D L E R + L + Q + + +L + H+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR- 137
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLP----SRKASENLAIG-RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + A I +PE +
Sbjct: 138 ---DLAARNCLV-GENHL--VKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS V +++ D+ +
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLSQ-VYELLEKDYR--------ME 234
Query: 558 AREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
EG E ++ EL C P RP +E+ + E +
Sbjct: 235 RPEGCPE--KVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 323 EVLGKGKVGSTYKATLESG----AVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENLAK 377
EV+G G+ G + L++ + VA+K +K ++EF+ + ++G+ +H N+ +
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + +I+ EF+ NG+L L + G + + +++ A G+ +L +
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV----IQLVGMLRGIASGMRYLAEM 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL------PSRKASENLAI---GR 488
+ H+ +L + NIL+ N K+++FG L P+ +S I
Sbjct: 136 SYVHR----DLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE ++ T +D + +GI++ EV++
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 40/244 (16%)
Query: 306 DKTI-PVFDLDDLLRASAEVLGKGKVGSTYKATLESGAV---VAVKRVKNMNALS-KKEF 360
D TI PV D +D+ +V+G+G G KA ++ + A+KR+K + ++F
Sbjct: 5 DPTIYPVLDWNDI--KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 62
Query: 361 VQQMQLLGKLKHENLAKIVSFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIP--- 414
++++L KL H I++ + E + +Y E+ P+G+L D L +SR + P
Sbjct: 63 AGELEVLCKLGHH--PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 120
Query: 415 --------LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKL 466
L+ L A+G+ +L Q + H +L + NIL+ + Y AK+
Sbjct: 121 IANSTASTLSSQQLLHFAADVARGMDYLSQK----QFIHRDLAARNILV---GENYVAKI 173
Query: 467 TNFGFLPLLPSRKASENLAIGRSP------EFPEGKRLTHKADVYCFGIILLEVIT-GRI 519
+FG L ++ +GR P E T +DV+ +G++L E+++ G
Sbjct: 174 ADFG---LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 230
Query: 520 PGNG 523
P G
Sbjct: 231 PYCG 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 113/244 (46%), Gaps = 40/244 (16%)
Query: 306 DKTI-PVFDLDDLLRASAEVLGKGKVGSTYKATLESGAV---VAVKRVKNMNALS-KKEF 360
D TI PV D +D+ +V+G+G G KA ++ + A+KR+K + ++F
Sbjct: 15 DPTIYPVLDWNDI--KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDF 72
Query: 361 VQQMQLLGKLKHENLAKIVSFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIP--- 414
++++L KL H I++ + E + +Y E+ P+G+L D L +SR + P
Sbjct: 73 AGELEVLCKLGHH--PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 130
Query: 415 --------LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKL 466
L+ L A+G+ +L Q + H +L + NIL+ + Y AK+
Sbjct: 131 IANSTASTLSSQQLLHFAADVARGMDYLSQK----QFIHRDLAARNILV---GENYVAKI 183
Query: 467 TNFGFLPLLPSRKASENLAIGRSP------EFPEGKRLTHKADVYCFGIILLEVIT-GRI 519
+FG L ++ +GR P E T +DV+ +G++L E+++ G
Sbjct: 184 ADFG---LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240
Query: 520 PGNG 523
P G
Sbjct: 241 PYCG 244
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 314 LDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLK 371
+DDL + LG G G + S + V + K+ + + ++ ++++L L
Sbjct: 20 IDDLFIFKRK-LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 372 HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
H N+ KI + I+ E G L + + ++ G+ L+ ++KQ L
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNAL 137
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE 491
A+ H S V H +LK NIL + K+ +FG L S + S N A
Sbjct: 138 AYFH----SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193
Query: 492 FPE--GKRLTHKADVYCFGIILLEVITGRIPGNGS 524
PE + +T K D++ G+++ ++TG +P G+
Sbjct: 194 APEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 84 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 138
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 139 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWS 547
+PE + + +H +D + FG+ L E+ T G+ P G G+ + R+ D
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 251
Query: 548 TDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
DI +V + +C PE RP + + E QP
Sbjct: 252 QDIYNVMV------------------QCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + +E PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 129 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWS 547
+PE + + +H +D + FG+ L E+ T G+ P G G+ + R+ D
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 241
Query: 548 TDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
DI +V + +C PE RP + + E QP
Sbjct: 242 QDIYNVMV------------------QCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 78 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 132
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 133 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWS 547
+PE + + +H +D + FG+ L E+ T G+ P G G+ + R+ D
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 245
Query: 548 TDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
DI +V + +C PE RP + + E QP
Sbjct: 246 QDIYNVMV------------------QCWAHKPEDRPTFVALRDFLLEAQP 278
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 270 SNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRAS----AEVL 325
S+E + G+ HL K+P + DP F D T V + L A+ +V+
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTFVDPH-----TFEDPTQTVHEFAKELDATNISIDKVV 53
Query: 326 GKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ +I+ E++ NGSL L + + + +++ A G+ +L +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYV 169
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPEFP 493
H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 170 HR----DLAARNILI---NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 494 EGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 84 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 138
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 139 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWS 547
+PE + + +H +D + FG+ L E+ T G+ P G G+ + R+ D
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 251
Query: 548 TDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
DI +V + +C PE RP + + E QP
Sbjct: 252 QDIYNVMV------------------QCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 45/291 (15%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 129 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWS 547
+PE + + +H +D + FG+ L E+ T G+ P G G+ + R+ D
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP 241
Query: 548 TDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
DI +V + +C PE RP + + E QP
Sbjct: 242 QDIYNVMV------------------QCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 32/242 (13%)
Query: 289 DSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE----SGAVV 344
D ++ EDP V EF ++D +V+G G+ G L+ V
Sbjct: 12 DPFTFEDPNEAVR-EFAK------EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFV 64
Query: 345 AVKRVKN-MNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDL 403
A+K +K+ +++F+ + ++G+ H N+ + +II EF+ NGSL
Sbjct: 65 AIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSF 124
Query: 404 LHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYR 463
L ++ G + + +++ A G+ +L + H+ +L + NIL+ N
Sbjct: 125 LRQNDGQFTV----IQLVGMLRGIAAGMKYLADMNYVHR----DLAARNILV---NSNLV 173
Query: 464 AKLTNFGFLPLLPSRKASENL--AIG-------RSPEFPEGKRLTHKADVYCFGIILLEV 514
K+++FG L + A+G +PE + ++ T +DV+ +GI++ EV
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 233
Query: 515 IT 516
++
Sbjct: 234 MS 235
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 359 EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWT 418
E ++ LL L H N+ K+ + K+ ++ EF G LF+ + + R
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDEC 146
Query: 419 TRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PS 477
+I+KQ G+ +LH+ H + H ++K NIL+ +N + K+ +FG
Sbjct: 147 DAANIMKQILSGICYLHK----HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
Query: 478 RKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
K + L +PE + K+ K DV+ G+I+ ++ G P G
Sbjct: 203 YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G + A + +VAVK +K + ++++F ++ +LL L+H+++ +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 379 VSFYYSKEEKLIIYEFLPNGSL----------FDLLHESRGVGRIPLAWTTRLSIIKQTA 428
L+++E++ +G L LL V PL L++ Q A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFR-----------ENDIYRAKLTNFGFLPLLPS 477
G+ +L LH H +L + N L+ + DIY G +LP
Sbjct: 169 AGMVYL-AGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 478 RKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIP 520
R PE ++ T ++DV+ FG++L E+ T G+ P
Sbjct: 225 RWM--------PPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 270 SNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRAS----AEVL 325
S+E + G+ HL K+P + DP F D T V + L A+ +V+
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTFVDPH-----TFEDPTQTVHEFAKELDATNISIDKVV 53
Query: 326 GKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ +I+ E++ NGSL L + + + +++ A G+ +L +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYV 169
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPEFP 493
H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 170 HR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 494 EGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G + A + +VAVK +K + ++++F ++ +LL L+H+++ +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 379 VSFYYSKEEKLIIYEFLPNGSL----------FDLLHESRGVGRIPLAWTTRLSIIKQTA 428
L+++E++ +G L LL V PL L++ Q A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFR-----------ENDIYRAKLTNFGFLPLLPS 477
G+ +L LH H +L + N L+ + DIY G +LP
Sbjct: 146 AGMVYL-AGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 478 RKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIP 520
R PE ++ T ++DV+ FG++L E+ T G+ P
Sbjct: 202 RWM--------PPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 128
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ NFG+ PS + + PE EG+
Sbjct: 129 KRVIHRDIKPENLLLGSAGEL---KIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 293 MEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNM 352
ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 1 MESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLFK 46
Query: 353 NALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR 408
L K + +++++ L+H N+ ++ +++ +I E+ P G+++ L +
Sbjct: 47 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 106
Query: 409 GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTN 468
A + I + A L++ H S +V H ++K N+L+ ++ K+ N
Sbjct: 107 KFDEQRTA-----TYITELANALSYCH----SKRVIHRDIKPENLLLGSAGEL---KIAN 154
Query: 469 FGFLPLLPSRKASENLAI--GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
FG+ PS + + PE EG+ K D++ G++ E + G+ P
Sbjct: 155 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A ++ + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-RKASENLAIGR-SPEFPEGKRL 498
KV H ++K N+L+ ++ K+ +FG+ PS R+A+ + PE EG+
Sbjct: 127 KKVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 40/224 (17%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G + A + +VAVK +K + ++++F ++ +LL L+H+++ +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 379 VSFYYSKEEKLIIYEFLPNGSL----------FDLLHESRGVGRIPLAWTTRLSIIKQTA 428
L+++E++ +G L LL V PL L++ Q A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFR-----------ENDIYRAKLTNFGFLPLLPS 477
G+ +L LH H +L + N L+ + DIY G +LP
Sbjct: 140 AGMVYL-AGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 478 RKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIP 520
R PE ++ T ++DV+ FG++L E+ T G+ P
Sbjct: 196 RWM--------PPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 270 SNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRAS----AEVL 325
S+E + G+ HL K+P + DP F D T V + L A+ +V+
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTFVDPH-----TFEDPTQTVHEFAKELDATNISIDKVV 53
Query: 326 GKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I+ E++ NGSL L H+++ + +++ A G+ +L
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
+ H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 168 YVHR----DLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 35/263 (13%)
Query: 270 SNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRAS----AEVL 325
S+E + G+ HL K+P + DP F D T V + L A+ +V+
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTYVDPH-----TFEDPTQTVHEFAKELDATNISIDKVV 53
Query: 326 GKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ +I+ E++ NGSL L + + + +++ A G+ +L +
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYV 169
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPEFP 493
H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 170 HR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 494 EGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 32/235 (13%)
Query: 292 SMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKN 351
+ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 2 AMESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLF 47
Query: 352 MNALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHES 407
L K + +++++ L+H N+ ++ +++ +I E+ P G ++ L +
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 408 RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLT 467
A + I + A L++ HS +V H ++K N+L+ ++ K+
Sbjct: 108 SKFDEQRTA-----TYITELANALSY----CHSKRVIHRDIKPENLLLGSAGEL---KIA 155
Query: 468 NFGFLPLLPSRKASENLAI--GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+FG+ PS + + PE EG+ K D++ G++ E + G+ P
Sbjct: 156 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G + A + +VAVK +K+ + ++K+F ++ +LL L+HE++ K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHE--------SRGVGRIPLAWTTRLSIIKQTAKG 430
+ ++++E++ +G L L + G L + L I +Q A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFR-----------ENDIYRAKLTNFGFLPLLPSRK 479
+ + L S H +L + N L+ D+Y G +LP R
Sbjct: 141 MVY----LASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 480 ASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIP 520
PE ++ T ++DV+ G++L E+ T G+ P
Sbjct: 197 M--------PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 18/207 (8%)
Query: 324 VLGKGKVGSTYKA----TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+LGKG G K T + AV + + N +++++LL KL H N+ K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLF 87
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
I+ E G LFD + + R + IIKQ G+ ++H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN---LAIGRSPEFPEGK 496
H + H +LK NIL+ + K+ +FG ++ A +PE G
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNG 523
K DV+ G+IL +++G P G
Sbjct: 199 -YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 120/281 (42%), Gaps = 41/281 (14%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G+ G Y + ++ VAVK +K + + +EF+++ ++ ++KH NL +++
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
+ I+ E++P G+L D L E R + L + Q + + +L + H+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECN---REEVTAVVLLYMATQISSAMEYLEKKNFIHR- 154
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-----RSPEFPEGKRL 498
+L + N L+ EN + K+ +FG L+ + + +PE
Sbjct: 155 ---DLAARNCLV-GENHV--VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF 208
Query: 499 THKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ K+DV+ FG++L E+ T G P G DLS + D+
Sbjct: 209 SIKSDVWAFGVLLWEIATYGMSPYPGI--------DLS-------------QVYDLLEKG 247
Query: 558 AREGQNEML--RLTELALECTDIAPEKRPKMSEVLRRIEEI 596
R Q E ++ EL C +P RP +E + E +
Sbjct: 248 YRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 127
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + ++ PE EG+
Sbjct: 128 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + ++ PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 18/207 (8%)
Query: 324 VLGKGKVGSTYKA----TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+LGKG G K T + AV + + N +++++LL KL H N+ K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLF 87
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
I+ E G LFD + + R + IIKQ G+ ++H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN---LAIGRSPEFPEGK 496
H + H +LK NIL+ + K+ +FG ++ A +PE G
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNG 523
K DV+ G+IL +++G P G
Sbjct: 199 -YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 325 LGKGKVGS----TYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G Y T + +G +VAVK +K + + +++++L L HE++ K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 379 VSFYYSKEEKLI--IYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ EK + + E++P GSL D L R + L +Q +G+A+LH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-------RKASENLAIGRS 489
+ H+ L + N+L+ +ND K+ +FG +P R+ ++ +
Sbjct: 131 QHYIHRA----LAARNVLL--DNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
PE + + + +DV+ FG+ L E++T D++ S
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT------------------------YCDSNQSPH 219
Query: 550 ILDVEILAAREGQNEMLRLTEL 571
E++ +GQ +LRLTEL
Sbjct: 220 TKFTELIGHTQGQMTVLRLTEL 241
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 325 LGKGKVGS----TYKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G Y T + +G +VAVK +K + + +++++L L HE++ K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 379 VSFYYSKEEKLI--IYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ EK + + E++P GSL D L R + L +Q +G+A+LH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL------PRHCVGLAQLLLFAQQICEGMAYLHA 129
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-------RKASENLAIGRS 489
+ H+ L + N+L+ +ND K+ +FG +P R+ ++ +
Sbjct: 130 QHYIHRA----LAARNVLL--DNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
PE + + + +DV+ FG+ L E++T D++ S
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT------------------------YCDSNQSPH 218
Query: 550 ILDVEILAAREGQNEMLRLTEL 571
E++ +GQ +LRLTEL
Sbjct: 219 TKFTELIGHTQGQMTVLRLTEL 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + ++ PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 131
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + ++ PE EG+
Sbjct: 132 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 81 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 133
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 134 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 134
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 135 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 231
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 270 SNEGQAGEGSAHLSEKKMP------DSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAE 323
S+E + G+ HL K+P D + EDP + V EF +LD + +
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTFVDPHTYEDPTQTVH-EFAK------ELDATNISIDK 51
Query: 324 VLGKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I+ E++ NGSL L + + + +++ A G+ +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMG 167
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
+ H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 168 YVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 84 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 136
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 137 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 233
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 292 SMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKN 351
+ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 2 AMESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLF 47
Query: 352 MNALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHES 407
L K + +++++ L+H N+ ++ +++ +I E+ P G ++ L +
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL 107
Query: 408 RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLT 467
A + I + A L++ HS +V H ++K N+L+ ++ K+
Sbjct: 108 SKFDEQRTA-----TYITELANALSY----CHSKRVIHRDIKPENLLLGSAGEL---KIA 155
Query: 468 NFGFLPLLPS--RKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+FG+ PS R PE EG+ K D++ G++ E + G+ P
Sbjct: 156 DFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 39/265 (14%)
Query: 270 SNEGQAGEGSAHLSEKKMP------DSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAE 323
S+E + G+ HL K+P D + EDP + V EF +LD + +
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTYVDPHTYEDPTQTVH-EFAK------ELDATNISIDK 51
Query: 324 VLGKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I+ E++ NGSL L + + + +++ A G+ +L
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMG 167
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
+ H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 168 YVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 18/207 (8%)
Query: 324 VLGKGKVGSTYKA----TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+LGKG G K T + AV + + N +++++LL KL H N+ K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLF 87
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
I+ E G LFD + + R + IIKQ G+ ++H+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN---LAIGRSPEFPEGK 496
H + H +LK NIL+ + K+ +FG ++ A +PE G
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNG 523
K DV+ G+IL +++G P G
Sbjct: 199 -YDEKCDVWSAGVILYILLSGTPPFYG 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 135
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 136 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 292 SMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKN 351
+ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 2 AMESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLF 47
Query: 352 MNALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHES 407
L K + +++++ L+H N+ ++ +++ +I E+ P G+++ L +
Sbjct: 48 KAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL 107
Query: 408 RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLT 467
A + I + A L++ H S +V H ++K N+L+ ++ K+
Sbjct: 108 SKFDEQRTA-----TYITELANALSYCH----SKRVIHRDIKPENLLLGSAGEL---KIA 155
Query: 468 NFGFLPLLPSRKASENLAI--GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+FG+ PS + + PE EG+ K D++ G++ E + G+ P
Sbjct: 156 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 129
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-RKASENLAIGR-SPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS R+A+ + PE EG+
Sbjct: 130 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 74 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 128
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 129 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNN 528
+PE + + +H +D + FG+ L E+ T G+ P G G+
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 137
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 138 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 39/265 (14%)
Query: 270 SNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRAS----AEVL 325
S+E + G+ HL K+P + DP F D T V + L A+ +V+
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTFVDPH-----TFEDPTQTVHEFAKELDATNISIDKVV 53
Query: 326 GKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I+ E++ NGSL L H+++ + +++ A G+ +L
Sbjct: 114 VVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLSDMG 167
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 168 FVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 129
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 130 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 323 EVLGKGKVGSTYKATLE--SGAVVAVK-RVKNMNALSKKE----FVQQMQLLGKLKHENL 375
E LG G G + + SG V+V + + LS+ E F++++ + L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + K++ E P GSL D L + +G L +R ++ Q A+G+ +L
Sbjct: 78 IRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG--HFLLGTLSRYAV--QVAEGMGYLE 132
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------- 488
S + H +L + N+L+ + + K+ +FG + LP + R
Sbjct: 133 ----SKRFIHRDLAARNLLLATRDLV---KIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNN 528
+PE + + +H +D + FG+ L E+ T G+ P G G+
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 323 EVLGKGKVG----STYKATLESGAVVAVKR-VKNMNALSKKEFVQQMQLLGKLKHENLAK 377
++LGKG G + +K T + A+ A+K+ V M+ + V++ L +H L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + +KE + E+L G DL++ + + L+ T + + GL FLH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGG---DLMYHIQSCHKFDLSRATFYA--AEIILGLQFLH-- 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
S + + +LK NIL+ ++ I K+ +FG A N G +PE
Sbjct: 136 --SKGIVYRDLKLDNILLDKDGHI---KIADFGMCKENMLGDAKTNXFCGTPDYIAPEIL 190
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
G++ H D + FG++L E++ G+ P +G
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 82 RLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 134
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 135 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 231
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 25/208 (12%)
Query: 323 EVLGKGKVGSTYKATLE----SGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENLAK 377
+V+G G+ G L+ VA+K +K+ +++F+ + ++G+ H N+
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ +II EF+ NGSL L ++ G + + +++ A G+ +L
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV----IQLVGMLRGIAAGMKYLADM 128
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL--AIG-------R 488
+ H+ L + NIL+ N K+++FG L + A+G
Sbjct: 129 NYVHRA----LAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE + ++ T +DV+ +GI++ EV++
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 152
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 153 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
N GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 323 EVLGKGKVGSTYKATL----ESGAV-VAVKRVKNMNAL-SKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ +K ES + V +K +++ + S + M +G L H ++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGV--GRIPLAWTTRLSIIKQTAKGLAFL 434
+++ +L+ ++LP GSL D + + RG ++ L W Q AKG+ +L
Sbjct: 97 RLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNWGV------QIAKGMYYL 149
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
+ H + H NL + N+L+ + + ++ +FG LLP + ++P
Sbjct: 150 EE----HGMVHRNLAARNVLLKSPSQV---QVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT 516
E + TH++DV+ +G+ + E++T
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-RKASENLAIGR-SPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS R+A+ + PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ KL H+N+ + + + I+ E + G L L E+R
Sbjct: 89 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 255
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 256 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 296
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 297 WQHQPEDRPNFAIILERIE 315
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 293 MEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNM 352
ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 1 MESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLFK 46
Query: 353 NALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR 408
L K + +++++ L+H N+ ++ +++ +I E+ P G+++ L +
Sbjct: 47 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 106
Query: 409 GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTN 468
A + I + A L++ H S +V H ++K N+L+ ++ K+ +
Sbjct: 107 KFDEQRTA-----TYITELANALSYCH----SKRVIHRDIKPENLLLGSAGEL---KIAD 154
Query: 469 FGFLPLLPSRKASENLAI--GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
FG+ PS + + PE EG+ K D++ G++ E + G+ P
Sbjct: 155 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 75 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 127
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 128 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 323 EVLGKGKVGSTYKATL----ESGAV-VAVKRVKNMNAL-SKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ +K ES + V +K +++ + S + M +G L H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGV--GRIPLAWTTRLSIIKQTAKGLAFL 434
+++ +L+ ++LP GSL D + + RG ++ L W Q AKG+ +L
Sbjct: 79 RLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNWGV------QIAKGMYYL 131
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
+ H + H NL + N+L+ + + ++ +FG LLP + ++P
Sbjct: 132 EE----HGMVHRNLAARNVLLKSPSQV---QVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT 516
E + TH++DV+ +G+ + E++T
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 133
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 134 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 74
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ KL H+N+ + + + I+ E + G L L E+R
Sbjct: 75 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 241
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 242 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 282
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 283 WQHQPEDRPNFAIILERIE 301
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 30/244 (12%)
Query: 285 KKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE----S 340
K D + EDP R V F K +LD V+G G+ G L+
Sbjct: 18 KTYIDPETYEDPNRAVHQ--FAK-----ELDASCIKIERVIGAGEFGEVCSGRLKLPGKR 70
Query: 341 GAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGS 399
VA+K +K +++F+ + ++G+ H N+ + + +I+ EF+ NG+
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 400 LFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFREN 459
L L + G + +++ A G+ +L + H+ +L + NIL+ N
Sbjct: 131 LDAFLRKHDG----QFTVIQLVGMLRGIAAGMRYLADMGYVHR----DLAARNILV---N 179
Query: 460 DIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPEFPEGKRLTHKADVYCFGIILL 512
K+++FG ++ + G +PE + ++ T +DV+ +GI++
Sbjct: 180 SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMW 239
Query: 513 EVIT 516
EV++
Sbjct: 240 EVMS 243
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + +V L K + +++++ L+H N+ ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ E + + R T + I + A L++ H S
Sbjct: 80 YFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTA--TYITELANALSYCH----S 130
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 131 KRVIHRDIKPENLLLGSNGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G P
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPP 209
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 322 AEVLGKGKVGSTYKATLES-GAVVAVKRVKNMNA------LSKKEFVQQMQLLGKLKHEN 374
E LG G+ K +S G A K +K + +S++E +++ +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + Y ++ + ++I E + G LFD L + L+ S IKQ G+ +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH+ K+ H +LK NI++ +N I KL +FG + +N I +PEF
Sbjct: 131 ---LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + L +AD++ G+I +++G P G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 152
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 153 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 136
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 137 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 233
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 158
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 159 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 255
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 136
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 137 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 233
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHEN 374
E LG G+ K + +G A K +K + +S++E +++ +L +++H N
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + + +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LHS ++ H +LK NI++ +N R KL +FG + + +N I +PEF
Sbjct: 131 ---LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIP 520
PE + L +AD++ G+I +++G P
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 91 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 143
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 144 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 240
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 32/234 (13%)
Query: 293 MEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNM 352
ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 1 MESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLFK 46
Query: 353 NALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR 408
L K + +++++ L+H N+ ++ +++ +I E+ P G+++ L +
Sbjct: 47 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 106
Query: 409 GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTN 468
A + I + A L++ H S +V H ++K N+L+ ++ K+ +
Sbjct: 107 KFDEQRTA-----TYITELANALSYCH----SKRVIHRDIKPENLLLGSAGEL---KIAD 154
Query: 469 FGFLPLLPSRKASENLAI--GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
FG+ PS + + PE EG+ K D++ G++ E + G+ P
Sbjct: 155 FGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 127
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-RKASENLAIGR-SPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS R+ + + + PE EG+
Sbjct: 128 KRVIHRDIKPENLLLGSAGEL---KIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 39/257 (15%)
Query: 278 GSAHLSEKKMP------DSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVG 331
G+ HL K+P D + EDP + V EF +LD + +V+G G+ G
Sbjct: 8 GNGHL---KLPGLRTYVDPHTYEDPTQTVH-EFAK------ELDATNISIDKVVGAGEFG 57
Query: 332 STYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKE 386
L+ VA+K +K +++F+ + ++G+ H N+ ++ +
Sbjct: 58 EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 117
Query: 387 EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHA 446
+I+ E++ NGSL L + + + +++ A G+ +L + H+
Sbjct: 118 PVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMGYVHR---- 169
Query: 447 NLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPEFPEGKRLT 499
+L + NILI N K+++FG +L + G SPE ++ T
Sbjct: 170 DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 500 HKADVYCFGIILLEVIT 516
+DV+ +GI+L EV++
Sbjct: 227 SASDVWSYGIVLWEVMS 243
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 133
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 134 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 130
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 131 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 143
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 144 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPP 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 87 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 139
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 140 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 236
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 125
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 126 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPP 204
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 135
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 136 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 133
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 134 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 322 AEVLGKGKVGSTYKATLES-GAVVAVKRVKNMNA------LSKKEFVQQMQLLGKLKHEN 374
E LG G+ K +S G A K +K + +S++E +++ +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + Y ++ + ++I E + G LFD L + L+ S IKQ G+ +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH+ K+ H +LK NI++ +N I KL +FG + +N I +PEF
Sbjct: 131 ---LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + L +AD++ G+I +++G P G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 322 AEVLGKGKVGSTYKATLES-GAVVAVKRVKNMNA------LSKKEFVQQMQLLGKLKHEN 374
E LG G+ K +S G A K +K + +S++E +++ +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + Y ++ + ++I E + G LFD L + L+ S IKQ G+ +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH+ K+ H +LK NI++ +N I KL +FG + +N I +PEF
Sbjct: 131 ---LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + L +AD++ G+I +++G P G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 323 EVLGKGKVG----STYKATLESGAVVAVKR-VKNMNALSKKEFVQQMQLLGKLKHENLAK 377
++LGKG G + +K T + A+ A+K+ V M+ + V++ L +H L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + +KE + E+L G DL++ + + L+ T + + GL FLH
Sbjct: 84 MFCTFQTKENLFFVMEYLNGG---DLMYHIQSCHKFDLSRATFYA--AEIILGLQFLH-- 136
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP--LLPSRKASENLAIGR--SPEFP 493
S + + +LK NIL+ ++ I K+ +FG +L K +E +PE
Sbjct: 137 --SKGIVYRDLKLDNILLDKDGHI---KIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
G++ H D + FG++L E++ G+ P +G
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 127
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
+V H ++K N+L+ ++ K+ +FG+ PS + + G PE EG+
Sbjct: 128 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSR--RDTLCGTLDYLPPEMIEGR 182
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 84 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 136
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 137 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHEN 374
E LG G+ K + +G A K +K + +S++E +++ +L +++H N
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + + +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHY- 144
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LHS ++ H +LK NI++ +N R KL +FG + + +N I +PEF
Sbjct: 145 ---LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFV 199
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIP 520
PE + L +AD++ G+I +++G P
Sbjct: 200 APEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 85 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 137
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 138 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 234
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 140
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 141 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 131
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 132 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 41/225 (18%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G + A + +VAVK +K+ ++K+F ++ +LL L+HE++ K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI-----------PLAWTTRLSIIKQT 427
+ ++++E++ +G L L I L + L I Q
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILI-----------FRENDIYRAKLTNFGFLPLLP 476
A G+ + L S H +L + N L+ D+Y G +LP
Sbjct: 143 ASGMVY----LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 477 SRKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIP 520
R PE ++ T ++DV+ FG+IL E+ T G+ P
Sbjct: 199 IRWM--------PPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 24/212 (11%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHEN 374
E LG G+ K + +G A K +K + +S++E +++ +L +++H N
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + + +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTEDEATQFLKQILDGVHY- 123
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LHS ++ H +LK NI++ +N R KL +FG + + +N I +PEF
Sbjct: 124 ---LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFV 178
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIP 520
PE + L +AD++ G+I +++G P
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 313 DLDDLLRASA--EVLGKGKVGSTYKAT-LESGAVVAVKRV-KNMNALSKKEFVQQMQLLG 368
D D+LL+ E +G G A + +G +VA+K + KN +++ L
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 369 KLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
L+H+++ ++ + + ++ E+ P G LFD + + + L+ + +Q
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI-----ISQDRLSEEETRVVFRQIV 118
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK------ASE 482
+A++H ++H+ +LK N+L ++ ++ KL +FG K
Sbjct: 119 SAVAYVHSQGYAHR----DLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCG 171
Query: 483 NLAIGRSPEFPEGKR-LTHKADVYCFGIILLEVITGRIP 520
+LA +PE +GK L +ADV+ GI+L ++ G +P
Sbjct: 172 SLAYA-APELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + +V L K + +++++ L+H N+ ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ E + + R T + I + A L++ H S
Sbjct: 80 YFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTA--TYITELANALSYCH----S 130
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + PE EG+
Sbjct: 131 KRVIHRDIKPENLLLGSNGEL---KIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH 187
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G P
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 105/242 (43%), Gaps = 34/242 (14%)
Query: 289 DSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGA----VV 344
D ++ EDP + V EF ++D +V+G G+ G L+ V
Sbjct: 8 DPFTFEDPNQAVR-EFAK------EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICV 60
Query: 345 AVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDL 403
A+K +K +++F+ + ++G+ H N+ + + +II E++ NGSL
Sbjct: 61 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF 120
Query: 404 LHESRGVGRIPLAWTTRLSIIKQTA--KGLAFLHQTLHSHKVPHANLKSSNILIFRENDI 461
L ++ G R ++I+ +G+ + L H +L + NIL+ N
Sbjct: 121 LRKNDG----------RFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILV---NSN 167
Query: 462 YRAKLTNFGFLPLLPSRKASENLAIG-------RSPEFPEGKRLTHKADVYCFGIILLEV 514
K+++FG +L + G +PE ++ T +DV+ +GI++ EV
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
Query: 515 IT 516
++
Sbjct: 228 MS 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 135
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 136 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 123
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + + PE EG+
Sbjct: 124 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 322 AEVLGKGKVGSTYKATLES-GAVVAVKRVKNMNA------LSKKEFVQQMQLLGKLKHEN 374
E LG G+ K +S G A K +K + +S++E +++ +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + Y ++ + ++I E + G LFD L + L+ S IKQ G+ +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH+ K+ H +LK NI++ +N I KL +FG + +N I +PEF
Sbjct: 131 ---LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + L +AD++ G+I +++G P G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 83 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 135
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 136 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 322 AEVLGKGKVGSTYKATLES-GAVVAVKRVKNMNA------LSKKEFVQQMQLLGKLKHEN 374
E LG G+ K +S G A K +K + +S++E +++ +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + Y ++ + ++I E + G LFD L + L+ S IKQ G+ +
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH+ K+ H +LK NI++ +N I KL +FG + +N I +PEF
Sbjct: 131 ---LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + L +AD++ G+I +++G P G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 25/203 (12%)
Query: 325 LGKGKVG-STYKATLESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G+G G + + E G +K + M++ ++E +++ +L +KH N+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGV----GRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ I+ ++ G LF ++ +GV +I L W ++ LA H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDWFVQIC--------LALKH-- 140
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
+H K+ H ++KS NI + ++ + +L +FG +L S IG SPE
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTV---QLGDFGIARVLNSTVELARACIGTPYYLSPEIC 197
Query: 494 EGKRLTHKADVYCFGIILLEVIT 516
E K +K+D++ G +L E+ T
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCT 220
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 128
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + PE EG+
Sbjct: 129 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 88
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 255
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 256 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 296
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 297 WQHQPEDRPNFAIILERIE 315
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG GK K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 14 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 73
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 240
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 241 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 281
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 282 WQHQPEDRPNFAIILERIE 300
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
EVLG G + +G + A+K +K A ++ +L K+KHEN+ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS--IIKQTAKGLAFLHQTLH 439
Y S ++ + + G LFD + E RGV +T + + +I+Q + +LH+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILE-RGV------YTEKDASLVIQQVLSAVKYLHE--- 124
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
+ + H +LK N+L + + +T+FG + + + A G +PE
Sbjct: 125 -NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K + D + G+I ++ G P
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 74
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 75 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 241
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 242 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 282
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 283 WQHQPEDRPNFAIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 14 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 73
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 133
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + H+ ++ + N L+
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEENHFIHR----DIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 240
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 241 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 281
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 282 WQHQPEDRPNFAIILERIE 300
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 100/234 (42%), Gaps = 32/234 (13%)
Query: 293 MEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNM 352
ME +R+ LE F+ P LGKGK G+ Y A + + +V
Sbjct: 1 MESKKRQWALEDFEIGRP--------------LGKGKFGNVYLAREKQSKFILALKVLFK 46
Query: 353 NALSK----KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR 408
L K + +++++ L+H N+ ++ +++ +I E+ P G+++ L +
Sbjct: 47 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 106
Query: 409 GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTN 468
A + I + A L++ H S +V H ++K N+L+ ++ K+ +
Sbjct: 107 KFDEQRTA-----TYITELANALSYCH----SKRVIHRDIKPENLLLGSAGEL---KIAD 154
Query: 469 FGFLPLLPSRKASENLAI--GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
FG+ PS + PE EG+ K D++ G++ E + G+ P
Sbjct: 155 FGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKNMNALSK----KEFVQQMQLLGKLKHENLAKIVS 380
LGKGK G+ Y A + + +V L K + +++++ L+H N+ ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+++ +I E+ P G+++ L + A + I + A L++ H S
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTA-----TYITELANALSYCH----S 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI--GRSPEFPEGKRL 498
+V H ++K N+L+ ++ K+ +FG+ PS + PE EG+
Sbjct: 127 KRVIHRDIKPENLLLGSAGEL---KIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 499 THKADVYCFGIILLEVITGRIP 520
K D++ G++ E + G+ P
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 39/265 (14%)
Query: 270 SNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRAS----AEVL 325
S+E + G+ HL K+P + DP F D T V + L A+ +V+
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTFVDPH-----TFEDPTQTVHEFAKELDATNISIDKVV 53
Query: 326 GKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEG 113
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA--KGLAFLHQTL 438
+ +I+ E + NGSL L + + ++I+ +G+A + L
Sbjct: 114 VVTKSKPVMIVTEXMENGSLDSFLRKH----------DAQFTVIQLVGMLRGIASGMKYL 163
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
H +L + NILI N K+++FG +L + G SPE
Sbjct: 164 SDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDXXK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 29 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYS 88
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 255
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 256 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 296
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 297 WQHQPEDRPNFAIILERIE 315
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 31 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 90
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 91 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 150
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 151 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 257
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 258 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 298
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 299 WQHQPEDRPNFAIILERIE 317
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 6 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 65
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 66 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 125
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + H+ ++ + N L+
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEENHFIHR----DIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 232
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 233 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 273
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 274 WQHQPEDRPNFAIILERIE 292
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 58/302 (19%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI--- 378
E++G G G +KA G +KRVK N +++E ++ L KL H N+
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 72
Query: 379 -VSFYYSKEEK------------LIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIK 425
F Y E I EF G+L + + RG L L + +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFE 129
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS---RKASE 482
Q KG+ ++H S K+ + +LK SNI + D + K+ +FG + L + R S+
Sbjct: 130 QITKGVDYIH----SKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKRXRSK 182
Query: 483 NLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVV 542
SPE + + D+Y G+IL E++ + ETS +D ++
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL------HVCDTAFETSKFFTDLRDGII 236
Query: 543 DNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQPMIEE 602
+DI D + E L +L + PE RP SE+LR + + E+
Sbjct: 237 -----SDIFD---------KKEKTLLQKLLSK----KPEDRPNTSEILRTLTVWKKSPEK 278
Query: 603 ND 604
N+
Sbjct: 279 NE 280
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 116/265 (43%), Gaps = 39/265 (14%)
Query: 270 SNEGQAGEGSAHLSEKKMP------DSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAE 323
S+E + G+ HL K+P D + EDP + V EF +LD + +
Sbjct: 2 SDEKRLHFGNGHL---KLPGLRTYVDPHTYEDPTQTVH-EFAK------ELDATNISIDK 51
Query: 324 VLGKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ ++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I+ E + NGSL L + + + +++ A G+ +L
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDMG 167
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
+ H+ +L + NILI N K+++FG +L + G SPE
Sbjct: 168 YVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE 220
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI+L EV++
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 21 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 80
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 81 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 140
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 141 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 247
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 248 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 288
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 289 WQHQPEDRPNFAIILERIE 307
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 311 VFDLDDLLRASAEVLGKGKVGSTYKATLES-GAVVAVKRVK-NMNALSKKEFVQQMQLLG 368
V + +DL+ E +G+G G + L + +VAVK + + K +F+Q+ ++L
Sbjct: 110 VLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 369 KLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
+ H N+ +++ K+ I+ E + G L R+ T L ++ A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAA 223
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
G+ + L S H +L + N L+ +N + K+++FG SR+ ++ +
Sbjct: 224 AGMEY----LESKCCIHRDLAARNCLVTEKNVL---KISDFGM-----SREEADGVXAAS 271
Query: 489 -----------SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE R + ++DV+ FGI+L E +
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 15 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 74
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 75 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 134
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 135 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 241
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 242 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 282
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 283 WQHQPEDRPNFAIILERIE 301
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 41 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 100
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 101 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 160
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 161 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 267
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 268 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRI------------------MTQC 308
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 309 WQHQPEDRPNFAIILERIE 327
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDXXK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 133
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 134 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E +G+G G+ +KA E+ +VA+KRV+ + + ++++ LL +LKH+N+ ++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+S ++ +++EF + L G L S + Q KGL F H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGF----CH 118
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPEG 495
S V H +LK N+LI R ++ KL NFG +P R S + R P+ G
Sbjct: 119 SRNVLHRDLKPQNLLINRNGEL---KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 496 KRLTHKA-DVYCFGIILLEVI-TGR--IPGN 522
+L + D++ G I E+ GR PGN
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 340 SGAVVAVKRVKNMNALSKKE---FVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLP 396
+GA A+K +K + + + ++ +L +L H N+ K+ F+ K ++ E
Sbjct: 28 TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR 87
Query: 397 NGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF 456
G LFD + + R + I+KQ G +LH+ H + H +LK N+L+
Sbjct: 88 GGELFDEI-----ILRQKFSEVDAAVIMKQVLSGTTYLHK----HNIVHRDLKPENLLLE 138
Query: 457 RENDIYRAKLTNFGFLPLLP-SRKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLE 513
++ K+ +FG K E L +PE K+ K DV+ G+IL
Sbjct: 139 SKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYI 197
Query: 514 VITGRIPGNG 523
++ G P G
Sbjct: 198 LLCGYPPFGG 207
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 32 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 91
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 92 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 151
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 152 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 258
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 259 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 299
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 300 WQHQPEDRPNFAIILERIE 318
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 83 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 135
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 136 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 232
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 323 EVLGKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ +
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + +I+ E++ NGSL L + + + +++ A G+ +L
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDM 137
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSP 490
+ H+ +L + NILI N K+++FG +L + G SP
Sbjct: 138 GYVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E ++ T +DV+ +GI+L EV++
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 124/319 (38%), Gaps = 60/319 (18%)
Query: 304 FFDKTIPVFDLDDLLRASAEV---LGKGKVGSTYKATLE------SGAVVAVKRVKNMNA 354
F KT + DL ++ R + + LG G G Y+ + S VAVK + + +
Sbjct: 55 FAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS 114
Query: 355 LSKK-EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI 413
+ +F+ + ++ K H+N+ + + + I+ E + G L L E+R
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQ 174
Query: 414 P--LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF--------------R 457
P LA L + + A G +L + +H + H ++ + N L+
Sbjct: 175 PSSLAMLDLLHVARDIACGCQYLEE---NHFI-HRDIAARNCLLTCPGPGRVAKIGDFGM 230
Query: 458 ENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE-FPEGKRLTHKADVYCFGIILLEVIT 516
DIYRA G +LP + PE F EG T K D + FG++L E+ +
Sbjct: 231 ARDIYRAGYYRKGGCAMLPVKWM--------PPEAFMEGI-FTSKTDTWSFGVLLWEIFS 281
Query: 517 -GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALEC 575
G +P S N E ++ RM + + + +C
Sbjct: 282 LGYMP-YPSKSNQEVLEFVTSGGRMDPPKNCPGPVY------------------RIMTQC 322
Query: 576 TDIAPEKRPKMSEVLRRIE 594
PE RP + +L RIE
Sbjct: 323 WQHQPEDRPNFAIILERIE 341
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 323 EVLGKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ +
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLL--HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + +I+ E++ NGSL L H+++ + +++ A G+ +L
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ------FTVIQLVGMLRGIASGMKYLS 152
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------R 488
+ H+ +L + NILI N K+++FG +L + G
Sbjct: 153 DMGYVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
SPE ++ T +DV+ +GI+L EV++
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 140
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 141 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ R + +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNVMR--IADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
GR +PE + TH++DV+ FG+++ E+ T + G+ PG
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPG 262
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q A+G+ +L
Sbjct: 78 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAEGMNYL 130
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 131 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 227
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 311 VFDLDDLLRASAEVLGKGKVGSTYKATLES-GAVVAVKRVK-NMNALSKKEFVQQMQLLG 368
V + +DL+ E +G+G G + L + +VAVK + + K +F+Q+ ++L
Sbjct: 110 VLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 369 KLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
+ H N+ +++ K+ I+ E + G L R+ T L ++ A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV----KTLLQMVGDAA 223
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
G+ + L S H +L + N L+ +N + K+++FG SR+ ++ +
Sbjct: 224 AGMEY----LESKCCIHRDLAARNCLVTEKNVL---KISDFGM-----SREEADGVYAAS 271
Query: 489 -----------SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE R + ++DV+ FGI+L E +
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 311 VFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK 369
V+D D+L E LG G G ++ + +G V K + L K ++ ++ +
Sbjct: 49 VYDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ 104
Query: 370 LKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
L H L + + K E ++I EFL G LFD + ++ ++ ++Q +
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQACE 160
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSR--KASENLAI 486
GL +H+ H + H ++K NI+ K+ +FG L P K + A
Sbjct: 161 GLKHMHE----HSIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVTTATAE 215
Query: 487 GRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+PE + + + D++ G++ +++G P G
Sbjct: 216 FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 128
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 129 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 182
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VL G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI+ + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 88 RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 140
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 141 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 128
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 129 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 182
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 229
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 322 AEVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQ----LLGKLKHENLA 376
+LGKG Y+A ++ +G VA+K + + A+ K VQ++Q + +LKH ++
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMI-DKKAMYKAGMVQRVQNEVKIHCQLKHPSIL 74
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI-PLAWTTRLSIIKQTAKGLAFLH 435
++ +++ ++ E NG + L R+ P + + Q G+ +LH
Sbjct: 75 ELYNYFEDSNYVYLVLEMCHNGEMNRYLK-----NRVKPFSENEARHFMHQIITGMLYLH 129
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
SH + H +L SN+L+ R +I K+ +FG L G SPE
Sbjct: 130 ----SHGILHRDLTLSNLLLTRNMNI---KIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
++DV+ G + ++ GR P
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 340 SGAVVAVKRVKNMNALSKKE---FVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLP 396
+GA A+K +K + + + ++ +L +L H N+ K+ F+ K ++ E
Sbjct: 45 TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR 104
Query: 397 NGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF 456
G LFD + + R + I+KQ G +LH+ H + H +LK N+L+
Sbjct: 105 GGELFDEI-----ILRQKFSEVDAAVIMKQVLSGTTYLHK----HNIVHRDLKPENLLLE 155
Query: 457 RENDIYRAKLTNFGFLPLLP-SRKASENLAIGR--SPEFPEGKRLTHKADVYCFGIILLE 513
++ K+ +FG K E L +PE K+ K DV+ G+IL
Sbjct: 156 SKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYI 214
Query: 514 VITGRIPGNG 523
++ G P G
Sbjct: 215 LLCGYPPFGG 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VL G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 81 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 133
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 134 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 54/263 (20%)
Query: 325 LGKGKVGST----YKATLE-SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
LG+G G Y T + +G +VAVK +K + + + Q++ +L L HE++ K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 379 VSFY--YSKEEKLIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ E++P GSL D L S G+ ++ L +Q +G+A+LH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLH 151
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-------RKASENLAIGR 488
+ H+ +L + N+L+ +ND K+ +FG +P R+ ++
Sbjct: 152 AQHYIHR----DLAARNVLL--DNDRL-VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
+PE + + + +DV+ FG+ L E++T D+ S
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYELLTH------------------------CDSSQSP 240
Query: 549 DILDVEILAAREGQNEMLRLTEL 571
+E++ +GQ +LRLTEL
Sbjct: 241 PTKFLELIGIAQGQMTVLRLTEL 263
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 88
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 149 CTYQLARGMEYLA----SQKCIHRDLTARNVLV-TENNV--MKIADFGLARDINNIDYYK 201
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 251
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 130/309 (42%), Gaps = 61/309 (19%)
Query: 322 AEVLGKGKVGSTYKAT---LESGA---VVAVKRVK-NMNALSKKEFVQQMQLLGKLKHEN 374
+ LG+G+ G KAT L+ A VAVK +K N + ++ + + +L ++ H +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG-------------------RIPL 415
+ K+ L+I E+ GSL L ESR VG L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 416 AWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL 475
+S Q ++G+ +L + K+ H +L + NIL+ + + K+++FG +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM----KLVHRDLAARNILV---AEGRKMKISDFGLSRDV 200
Query: 476 PSRKASENLAIGRSP------EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG--N 527
+ + GR P E T ++DV+ FG++L E++T + GN PG
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYPGIPP 258
Query: 528 NETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMS 587
L RM ++ S EM RL L+C P+KRP +
Sbjct: 259 ERLFNLLKTGHRMERPDNCS---------------EEMYRLM---LQCWKQEPDKRPVFA 300
Query: 588 EVLRRIEEI 596
++ + +E++
Sbjct: 301 DISKDLEKM 309
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIP 520
PE + L +AD++ G+I +++G P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VLG G G+ YK E V VA+ ++ + + KE + + ++ + + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 115 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 167
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 168 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 264
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 93
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 154 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 206
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 256
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 45/275 (16%)
Query: 292 SMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKAT-LESGAVVAVKRVK 350
S++DP+ E F K P DL +G G G+ Y A + + VVA+K++
Sbjct: 37 SLKDPDV---AELFFKDDPEKLFSDLRE-----IGHGSFGAVYFARDVRNSEVVAIKKMS 88
Query: 351 NMNALSK---KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHES 407
S ++ +++++ L KL+H N + Y + ++ E+ GS DLL
Sbjct: 89 YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE-- 145
Query: 408 RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLT 467
V + PL ++ +GLA+LH SH + H ++K+ NIL+ + KL
Sbjct: 146 --VHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLV---KLG 196
Query: 468 NFGFLPLLPSRKASENLAIGRSPE----FPEGKRLTHKADVYCFGIILLEVITGRIP--- 520
+FG ++ +PE EG+ K DV+ GI +E+ + P
Sbjct: 197 DFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPLFN 255
Query: 521 -----------GNGSPGNNETSGDLSDWVRMVVDN 544
N SP SG S++ R VD+
Sbjct: 256 MNAMSALYHIAQNESPALQ--SGHWSEYFRNFVDS 288
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 322 AEVLGKGKVGSTYKATLES-GAVVAVKRVKNMNA------LSKKEFVQQMQLLGKLKHEN 374
E LG G+ K +S G A K +K + + ++E +++ +L ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+ + Y ++ + ++I E + G LFD L + L+ S IKQ G+ +
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEEEATSFIKQILDGVNY- 130
Query: 435 HQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH+ K+ H +LK NI++ +N I KL +FG + +N I +PEF
Sbjct: 131 ---LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFV 185
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + L +AD++ G+I +++G P G
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 27/208 (12%)
Query: 323 EVLGKGKVGSTYKATLESGA----VVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA--KGLAFLH 435
+ + +II E++ NGSL L ++ G R ++I+ +G+
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----------RFTVIQLVGMLRGIGSGM 129
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------R 488
+ L H +L + NIL+ N K+++FG +L + G
Sbjct: 130 KYLSDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 186
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE ++ T +DV+ +GI++ EV++
Sbjct: 187 APEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 90
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 151 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 203
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
GR +PE + TH++DV+ FG+++ E+ T + G+ PG
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPG 251
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 129/309 (41%), Gaps = 61/309 (19%)
Query: 322 AEVLGKGKVGSTYKAT---LESGA---VVAVKRVK-NMNALSKKEFVQQMQLLGKLKHEN 374
+ LG+G+ G KAT L+ A VAVK +K N + ++ + + +L ++ H +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG-------------------RIPL 415
+ K+ L+I E+ GSL L ESR VG L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 416 AWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL 475
+S Q ++G+ +L + K+ H +L + NIL+ + K+++FG +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM----KLVHRDLAARNILVAEGR---KMKISDFGLSRDV 200
Query: 476 PSRKASENLAIGRSP------EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG--N 527
+ + GR P E T ++DV+ FG++L E++T + GN PG
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYPGIPP 258
Query: 528 NETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMS 587
L RM ++ S EM RL L+C P+KRP +
Sbjct: 259 ERLFNLLKTGHRMERPDNCS---------------EEMYRLM---LQCWKQEPDKRPVFA 300
Query: 588 EVLRRIEEI 596
++ + +E++
Sbjct: 301 DISKDLEKM 309
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 323 EVLGKGKVGSTYKATL--ESGAV---VAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLA 376
+VL G G+ YK E V VA+K ++ + + KE + + ++ + + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVG-RIPLAWTTRLSIIKQTAKGLAFL 434
+++ + +LI + +P G L D + E + +G + L W Q AKG+ +L
Sbjct: 88 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV------QIAKGMNYL 140
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP---- 490
++ H +L + N+L+ + K+T+FG LL + + + G+ P
Sbjct: 141 E----DRRLVHRDLAARNVLVKTPQHV---KITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 491 --EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
E + TH++DV+ +G+ + E++T G P +G P + +S
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 237
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%), Gaps = 27/208 (12%)
Query: 323 EVLGKGKVGSTYKATLESGA----VVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA--KGLAFLH 435
+ + +II E++ NGSL L ++ G R ++I+ +G+
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDG----------RFTVIQLVGMLRGIGSGM 123
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------R 488
+ L H +L + NIL+ N K+++FG +L + G
Sbjct: 124 KYLSDMSYVHRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT 180
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE ++ T +DV+ +GI++ EV++
Sbjct: 181 APEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGR---- 488
LHS ++ H +LK NI++ N R K+ +FG + +N+ G
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI-FGTPAFV 184
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
+PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VA+K + +N S ++ ++++++ L H N+ K+
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ +I E+ G +FD L V + S +Q + + HQ
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYL-----VAHGRMKEKEARSKFRQIVSAVQYCHQK-- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG------------ 487
++ H +LK+ N+L+ + +I K+ +FGF S +G
Sbjct: 134 --RIVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTVGGKLDAFCGAPPY 179
Query: 488 RSPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G+ K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIY-RAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 30/208 (14%)
Query: 339 ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFL 395
+ VAVK +K+ +A K + V +M+++ + KH+N+ ++ +I E+
Sbjct: 111 KEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 169
Query: 396 PNGSLFDLLHESRGVG--------RIP---LAWTTRLSIIKQTAKGLAFLHQTLHSHKVP 444
G+L + L R G R+P + + +S Q A+G+ +L S K
Sbjct: 170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA----SQKCI 225
Query: 445 HANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRL 498
H +L + N+L+ EN++ K+ +FG + + + GR +PE +
Sbjct: 226 HRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 282
Query: 499 THKADVYCFGIILLEVITGRIPGNGSPG 526
TH++DV+ FG+++ E+ T + G+ PG
Sbjct: 283 THQSDVWSFGVLMWEIFT--LGGSPYPG 308
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 37/242 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSK---KEFVQQMQLLGKLKHENLAKIVS 380
+G G G+ Y A + + VVA+K++ S ++ +++++ L KL+H N +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
Y + ++ E+ GS DLL V + PL ++ +GLA+LH S
Sbjct: 83 CYLREHTAWLVMEYCL-GSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLH----S 133
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE----FPEGK 496
H + H ++K+ NIL+ + KL +FG ++ +PE EG+
Sbjct: 134 HNMIHRDVKAGNILLSEPGLV---KLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 497 RLTHKADVYCFGIILLEVITGRIP--------------GNGSPGNNETSGDLSDWVRMVV 542
K DV+ GI +E+ + P N SP SG S++ R V
Sbjct: 191 -YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--SGHWSEYFRNFV 247
Query: 543 DN 544
D+
Sbjct: 248 DS 249
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 98/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VA+K + +N S ++ ++++++ L H N+ K+
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ +I E+ G +FD L V + S +Q + + HQ
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYL-----VAHGRMKEKEARSKFRQIVSAVQYCHQK-- 130
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG------------ 487
++ H +LK+ N+L+ + +I K+ +FGF S +G
Sbjct: 131 --RIVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTVGGKLDTFCGSPPY 176
Query: 488 RSPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E +G+G G+ +KA E+ +VA+KRV+ + + ++++ LL +LKH+N+ ++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+S ++ +++EF + L G L S + Q KGL F H
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGF----CH 118
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPEG 495
S V H +LK N+LI R ++ KL +FG +P R S + R P+ G
Sbjct: 119 SRNVLHRDLKPQNLLINRNGEL---KLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 496 KRLTHKA-DVYCFGIILLEVITGRIPGNGSPGNN 528
+L + D++ G I E+ P PGN+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARP--LFPGND 207
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 323 EVLGKGKVGSTYKATLE----SGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ +
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + +I+ E + NGSL L + + + +++ A G+ +L
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV----IQLVGMLRGIASGMKYLSDM 137
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSP 490
+ H+ +L + NILI N K+++FG +L + G SP
Sbjct: 138 GYVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E ++ T +DV+ +GI+L EV++
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A + + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEEDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I E+ G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 39/217 (17%)
Query: 325 LGKGKVGSTYKATLE-SGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G GS K + SG ++AVKR+++ ++ +K+ + + ++ ++ + IV FY
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRSSDCPYIVQFY 87
Query: 383 ---YSKEEKLIIYEFLPNG---------SLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + + I E + S+ D + +G+I LA T K
Sbjct: 88 GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA----------TVKA 137
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR-- 488
L L + L K+ H ++K SNIL+ R +I KL +FG L A A R
Sbjct: 138 LNHLKENL---KIIHRDIKPSNILLDRSGNI---KLCDFGISGQLVDSIAKTRDAGCRPY 191
Query: 489 -SPEF--PEGKRLTH--KADVYCFGIILLEVITGRIP 520
+PE P R + ++DV+ GI L E+ TGR P
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 25/228 (10%)
Query: 321 SAEVLGKGKVGSTYKATLES-GAVVAVKRVK------NMNALSKKEFVQQMQLLGKLKHE 373
+ E LG G K +S G A K +K + +S+++ +++ +L +++H
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
N+ + Y +K + ++I E + G LFD L E L +KQ G+ +
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEEEATEFLKQILNGVYY 129
Query: 434 LHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
LHS ++ H +LK NI++ N R K+ +FG + +N I +PEF
Sbjct: 130 ----LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEF 183
Query: 493 --PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLS 535
PE + L +AD++ G+I +++G P G ET ++S
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-KQETLANVS 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 57/304 (18%)
Query: 325 LGKGKVGSTYKAT------LESGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENLAK 377
+G+G G ++A E +VAVK +K +A + +F ++ L+ + + N+ K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLH-------------------ESRGVGRIPLAWT 418
++ + +++E++ G L + L G PL+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 419 TRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR 478
+L I +Q A G+A+L + K H +L + N L+ EN + K+ +FG + S
Sbjct: 175 EQLCIARQVAAGMAYLSE----RKFVHRDLATRNCLV-GENMV--VKIADFGLSRNIYSA 227
Query: 479 ---KASENLAIG---RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSG 532
KA N AI PE R T ++DV+ +G++L E+ + + P
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL----QPYYGMAHE 283
Query: 533 DLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRR 592
++ +VR D ILA E N L L L C P RP + R
Sbjct: 284 EVIYYVR------------DGNILACPE--NCPLELYNLMRLCWSKLPADRPSFCSIHRI 329
Query: 593 IEEI 596
++ +
Sbjct: 330 LQRM 333
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 324 VLGKGKVGSTYKATLESGAV----VAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKI 378
V+G G+ G L+ VA+K +K +++F+ + ++G+ H N+ +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I+ E++ NGSL L ++ G + + +++ + G+ +L
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV----IQLVGMLRGISAGMKYLSDMG 144
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSPE 491
+ H+ +L + NILI N K+++FG +L + G +PE
Sbjct: 145 YVHR----DLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
Query: 492 FPEGKRLTHKADVYCFGIILLEVIT 516
++ T +DV+ +GI++ EV++
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 124/315 (39%), Gaps = 71/315 (22%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI--- 378
E++G G G +KA G ++RVK N +++E ++ L KL H N+
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 73
Query: 379 -VSFYYSKEEK-------------------------LIIYEFLPNGSLFDLLHESRGVGR 412
F Y E I EF G+L + + RG
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-- 131
Query: 413 IPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFL 472
L L + +Q KG+ ++H S K+ H +LK SNI + D + K+ +FG +
Sbjct: 132 -KLDKVLALELFEQITKGVDYIH----SKKLIHRDLKPSNIFLV---DTKQVKIGDFGLV 183
Query: 473 PLLPS---RKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNE 529
L + R S+ SPE + + D+Y G+IL E++ + E
Sbjct: 184 TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL------HVCDTAFE 237
Query: 530 TSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEV 589
TS +D ++ +DI D + E L +L + PE RP SE+
Sbjct: 238 TSKFFTDLRDGII-----SDIFD---------KKEKTLLQKLLSK----KPEDRPNTSEI 279
Query: 590 LRRIEEIQPMIEEND 604
LR + + E+N+
Sbjct: 280 LRTLTVWKKSPEKNE 294
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 358 KEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAW 417
K F +++ +L H+N+ ++ + ++ E++ +L + + ES G PL+
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHG----PLSV 110
Query: 418 TTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS 477
T ++ Q G+ H ++ H ++K NILI + K+ +FG L
Sbjct: 111 DTAINFTNQILDGIKHAHDM----RIVHRDIKPQNILIDSNKTL---KIFDFGIAKALSE 163
Query: 478 RKASE-NLAIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
++ N +G SPE +G+ D+Y GI+L E++ G P NG
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 20/203 (9%)
Query: 325 LGKGKVGSTYKATLE-SGAVVAVKRV-KNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
LG+G K + S AVK + K M A ++KE G H N+ K+ +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIVKLHEVF 75
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ + ++ E L G LF+ + + + ++ I+++ ++ +H
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHDV----G 126
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKASENLAIGRSPEFPEGKR 497
V H +LK N+L END K+ +FGF L P + L +PE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA-APELLNQNG 185
Query: 498 LTHKADVYCFGIILLEVITGRIP 520
D++ G+IL +++G++P
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVP 208
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I + G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 61/309 (19%)
Query: 322 AEVLGKGKVGSTYKAT---LESGA---VVAVKRVK-NMNALSKKEFVQQMQLLGKLKHEN 374
+ LG+G+ G KAT L+ A VAVK +K N + ++ + + +L ++ H +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG-------------------RIPL 415
+ K+ L+I E+ GSL L ESR VG L
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 416 AWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL 475
+S Q ++G+ +L + + H +L + NIL+ + K+++FG +
Sbjct: 148 TMGDLISFAWQISQGMQYLAEM----SLVHRDLAARNILVAEGR---KMKISDFGLSRDV 200
Query: 476 PSRKASENLAIGRSP------EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG--N 527
+ + GR P E T ++DV+ FG++L E++T + GN PG
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--LGGNPYPGIPP 258
Query: 528 NETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMS 587
L RM ++ S EM RL L+C P+KRP +
Sbjct: 259 ERLFNLLKTGHRMERPDNCS---------------EEMYRLM---LQCWKQEPDKRPVFA 300
Query: 588 EVLRRIEEI 596
++ + +E++
Sbjct: 301 DISKDLEKM 309
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGK--LKHENL----A 376
E +GKG+ G ++ + + V VK ++ +K + ++ +L L+HEN+ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVA----VKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ +S + +I + GSL+D L + L + L I+ A GLA LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHI 123
Query: 437 TLHSHK----VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
+ + + H +LKS NIL+ + A L L ++ S +++ L +G +P
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHS-QSTNQLDVGNNPRV 178
Query: 493 PEGKRLT----------------HKADVYCFGIILLEVITGRIPGNG 523
+ + + D++ FG++L EV R+ NG
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNG 224
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKK---EFVQQMQLLGKLKHENLAKI 378
E+LG G + + A L VAVK ++ A F ++ Q L H I
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP---AI 74
Query: 379 VSFYYSKEEKL-------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
V+ Y + E + I+ E++ +L D++H + G P+ + +I + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEG----PMTPKRAIEVIADACQAL 129
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS---ENLAIGR 488
F HQ + + H ++K +NILI N + K+ +FG + S IG
Sbjct: 130 NFSHQ----NGIIHRDVKPANILISATNAV---KVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 489 ----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
SPE G + ++DVY G +L EV+TG P G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 98
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 154
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 155 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 263
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 264 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 91
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 147
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 148 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 256
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 257 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 93
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 149
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 150 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 258
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 324 VLGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
VLGKG G Y S V +A+K + ++ + +++ L LKH+N+ + + +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLA--WTTRLSIIKQTAKGLAFLHQTLHS 440
I E +P GSL LL G PL T KQ +GL + LH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKY----LHD 140
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE-FPEG 495
+++ H ++K N+LI + + K+++FG L G +PE +G
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVL--KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
Query: 496 KRLTHK-ADVYCFGIILLEVITGRIP 520
R K AD++ G ++E+ TG+ P
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 152
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 208
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 209 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 317
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 318 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 42/227 (18%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGK--LKHENL----A 376
E +GKG+ G ++ + + G VAVK + + +K + ++ +L L+HEN+ A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIA 98
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ +S + +I + GSL+D L + L + L I+ A GLA LH
Sbjct: 99 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHI 152
Query: 437 TLHSHK----VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
+ + + H +LKS NIL+ + A L L ++ S +++ L +G +P
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHS-QSTNQLDVGNNPRV 207
Query: 493 PEGKRLT----------------HKADVYCFGIILLEVITGRIPGNG 523
+ + + D++ FG++L EV R+ NG
Sbjct: 208 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNG 253
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGK--LKHENL----A 376
E +GKG+ G ++ + + V VK ++ +K + ++ +L L+HEN+ A
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVA----VKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ +S + +I + GSL+D L + L + L I+ A GLA LH
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHI 123
Query: 437 TLHSHK----VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF 492
+ + + H +LKS NIL+ + A L L ++ S +++ L +G +P
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG----LAVMHS-QSTNQLDVGNNPRV 178
Query: 493 PEGKRLT----------------HKADVYCFGIILLEVITGRIPGNG 523
+ + + D++ FG++L EV R+ NG
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-ARRMVSNG 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 94
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 150
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 151 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 259
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 260 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAVK + +N+ S ++ ++++++ L H N+ K+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + + +Q + + HQ
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 134 ---IVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTFGNKLDTFCGSPPY 178
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 93
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 149
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 150 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 258
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 324 VLGKGKVGSTYKATLESGAV-VAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
VLGKG G Y S V +A+K + ++ + +++ L LKH+N+ + + +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 383 YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLA--WTTRLSIIKQTAKGLAFLHQTLHS 440
I E +P GSL LL G PL T KQ +GL + LH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG----PLKDNEQTIGFYTKQILEGLKY----LHD 126
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE-FPEG 495
+++ H ++K N+LI + + K+++FG L G +PE +G
Sbjct: 127 NQIVHRDIKGDNVLINTYSGV--LKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
Query: 496 KRLTHK-ADVYCFGIILLEVITGRIP 520
R K AD++ G ++E+ TG+ P
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 37/230 (16%)
Query: 325 LGKGKVGSTYKATL--------ESGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHE 373
LG+G G A + VAVK +K+ +A K + V +M+++ + KH+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGKHK 101
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVG--------RIP---LAWTTRLS 422
N+ ++ +I + G+L + L R G R+P + + +S
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q A+G+ +L S K H +L + N+L+ EN++ K+ +FG + + +
Sbjct: 162 CTYQLARGMEYLA----SQKCIHRDLAARNVLV-TENNV--MKIADFGLARDINNIDYYK 214
Query: 483 NLAIGR------SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
GR +PE + TH++DV+ FG+++ E+ T G P G P
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 118/295 (40%), Gaps = 55/295 (18%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKAS 481
+L+ + K H NL + N ++ + DIY G LLP R +
Sbjct: 145 YLN----AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 482 ENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRM 540
PE + T +D++ FG++L E+ + P G +NE ++
Sbjct: 201 --------PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKF 244
Query: 541 VVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
V+D + LD + N R+T+L C P RP E++ +++
Sbjct: 245 VMDGGY----LD-------QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAVK + +N+ S ++ ++++++ L H N+ K+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + + +Q + + HQ
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 134 ---IVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTFGNKLDAFCGAPPY 178
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEF-VQQMQLLGKLKHENLAKIV 379
+++LG+G + ++ + +G + A+K N++ L + +++ ++L KL H+N+ K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 380 SFY--YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + K++I EF P GSL+ +L E +P + L +++ G+ L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP--ESEFLIVLRDVVGGMNHLRE- 130
Query: 438 LHSHKVPHANLKSSNIL-IFRENDIYRAKLTNFG 470
+ + H N+K NI+ + E+ KLT+FG
Sbjct: 131 ---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAVK + +N+ S ++ ++++++ L H N+ K+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + + +Q + + HQ
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 134 ---IVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTFGNKLDTFCGSPPY 178
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H NL + N ++ + + K+ +FG + RK + L R
Sbjct: 146 YLN----AKKFVHRNLAARNCMVAHD---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 250
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P RP E++ +++
Sbjct: 251 Y----LD-------QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 94
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ FL
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKFL 150
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 151 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 259
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 260 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAVK + +N S ++ ++++++ L H N+ K+
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + + +Q + + HQ
Sbjct: 81 EVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKY- 134
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S +G
Sbjct: 135 ---IVHRDLKAENLLLDGDMNI---KIADFGF---------SNEFTVGNKLDTFCGSPPY 179
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 43/221 (19%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAVK + +N+ S ++ ++++++ L H N+ K+
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLAFLHQ 436
+++ ++ E+ G +FD L + W + +Q + + HQ
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYL--------VAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR-------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 125 KF----IVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTFGNKLDTFCGS 168
Query: 489 ----SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 169 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 209
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKK---EFVQQMQLLGKLKHENLAKI 378
E+LG G + + A L VAVK ++ A F ++ Q L H I
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP---AI 74
Query: 379 VSFYYSKEEKL-------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
V+ Y + E + I+ E++ +L D++H + G P+ + +I + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEG----PMTPKRAIEVIADACQAL 129
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS---ENLAIGR 488
F HQ + + H ++K +NI+I N + K+ +FG + S IG
Sbjct: 130 NFSHQ----NGIIHRDVKPANIMISATNAV---KVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 489 ----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
SPE G + ++DVY G +L EV+TG P G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 33/219 (15%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKK---EFVQQMQLLGKLKHENLAKI 378
E+LG G + + A L VAVK ++ A F ++ Q L H I
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP---AI 74
Query: 379 VSFYYSKEEKL-------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
V+ Y + E + I+ E++ +L D++H + G P+ + +I + L
Sbjct: 75 VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEG----PMTPKRAIEVIADACQAL 129
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS---ENLAIGR 488
F HQ + + H ++K +NI+I N + K+ +FG + S IG
Sbjct: 130 NFSHQ----NGIIHRDVKPANIMISATNAV---KVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 489 ----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
SPE G + ++DVY G +L EV+TG P G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 360 FVQQMQLLGKLKHENLAKIVSFYYSKEEKL-------IIYEFLPNGSLFDLLHESRGVGR 412
F ++ Q L H IV+ Y + E + I+ E++ +L D++H + G
Sbjct: 59 FRREAQNAAALNHP---AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEG--- 111
Query: 413 IPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFL 472
P+ + +I + L F HQ + + H ++K +NI+I N + K+ +FG
Sbjct: 112 -PMTPKRAIEVIADACQALNFSHQ----NGIIHRDVKPANIMISATNAV---KVMDFGIA 163
Query: 473 PLLPSRKAS---ENLAIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ S IG SPE G + ++DVY G +L EV+TG P G
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 111
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 167
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 168 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 276
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 277 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAV+ + +N+ S ++ ++++++ L H N+ K+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + + +Q + + HQ
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 134 ---IVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTFGNKLDEFCGSPPY 178
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAV+ + +N+ S ++ ++++++ L H N+ K+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + + +Q + + HQ
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYL-----VAHGRMKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 134 ---IVHRDLKAENLLLDADMNI---KIADFGF---------SNEFTFGNKLDTFCGSPPY 178
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR------- 205
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
SPE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 206 -WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 256
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 257 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 72 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 125
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASEN-LAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 126 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 179
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + + +
Sbjct: 180 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 239
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSE 588
+ + R TEL + + I E++ + E
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 276
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 88
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 144
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 145 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 253
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 254 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 91
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 147
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 148 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 256
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 257 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEF-VQQMQLLGKLKHENLAKIV 379
+++LG+G + ++ + +G + A+K N++ L + +++ ++L KL H+N+ K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 380 SFY--YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + K++I EF P GSL+ +L E +P + L +++ G+ L +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP--ESEFLIVLRDVVGGMNHLRE- 130
Query: 438 LHSHKVPHANLKSSNIL-IFRENDIYRAKLTNFG 470
+ + H N+K NI+ + E+ KLT+FG
Sbjct: 131 ---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H +L + N ++ + + K+ +FG + RK + L R
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 249
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P+ RP E++ +++
Sbjct: 250 Y----LD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 92
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 148
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 149 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 257
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 258 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 93
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 149
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 150 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 258
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H +L + N ++ + + K+ +FG + RK + L R
Sbjct: 142 YLN----AKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 246
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P+ RP E++ +++
Sbjct: 247 Y----LD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 112
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 168
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 169 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 277
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 278 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 198
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 199 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 246
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 247 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 294
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 92
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 148
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 149 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 257
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 258 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 90
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 146
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 147 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 255
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 256 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 93
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 149
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 150 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 258
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 259 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 320 ASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV-QQMQLLGKLKHENLAKI 378
+ +V+G G G ++A L VA+K+V L K F +++Q++ +KH N+ +
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKV-----LQDKRFKNRELQIMRIVKHPNVVDL 97
Query: 379 VSFYYSKEEKL------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIK----QTA 428
+F+YS +K ++ E++P + SR + L T + +IK Q
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAK--LKQTMPMLLIKLYMYQLL 151
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR 488
+ LA+ +HS + H ++K N+L+ + + KL +FG +L + + + + R
Sbjct: 152 RSLAY----IHSIGICHRDIKPQNLLLDPPSGVL--KLIDFGSAKILIAGEPNVSXICSR 205
Query: 489 SPEFPE----GKRLTHKADVYCFGIILLEVITGR--IPG 521
PE T D++ G ++ E++ G+ PG
Sbjct: 206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG 244
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 124/286 (43%), Gaps = 47/286 (16%)
Query: 325 LGKGKVGSTYKATLESG-AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
L + G +K + VV V +V++ + ++F ++ L H N+ ++
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 384 S--KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
S +I ++P GSL+++LHE G + + + + A+G+AFLH TL
Sbjct: 78 SPPAPHPTLITHWMPYGSLYNVLHE--GTNFV-VDQSQAVKFALDMARGMAFLH-TLEP- 132
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL----AIGRSPEFPEGKR 497
+P L S +++I E+ R + + F P R + A+ + PE + R
Sbjct: 133 LIPRHALNSRSVMI-DEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPE--DTNR 189
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ AD++ F ++L E++T +P DLS+ +++ +
Sbjct: 190 RS--ADMWSFAVLLWELVTREVP----------FADLSN--------------MEIGMKV 223
Query: 558 AREGQNEML------RLTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
A EG + +++L C + P KRPK ++ +E++Q
Sbjct: 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 315 DDLLRASAEV-----LGKGKVGSTYKAT--LESGAVVAVKRVKNMNA-----LSKKEFVQ 362
D L RA + +G+G G +KA G VA+KRV+ LS V
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 363 QMQLLGKLKHENLAKIVSF----YYSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAW 417
++ L +H N+ ++ +E KL +++E + DL V +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPT 119
Query: 418 TTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS 477
T ++ Q +GL FLH SH+V H +LK NIL+ I KL +FG +
Sbjct: 120 ETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQI---KLADFGLARIYSF 172
Query: 478 RKASENLAIG---RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDL 534
+ A ++ + R+PE D++ G I E+ + GS ++ G +
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKI 231
Query: 535 SDWVRMVVDNDWSTDI-LDVEILAAREGQNEMLRLT-------ELALECTDIAPEKR 583
D + + + DW D+ L + ++ Q +T +L L+C P KR
Sbjct: 232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 323 EVLGKGKVGSTYKATLESG-------AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+G+G G Y TL AV ++ R+ ++ +S +F+ + ++ H N+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGIIMKDFSHPNV 85
Query: 376 AKIVSFYYSKE-EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
++ E L++ ++ +G L + + R P + Q AKG+ +L
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNPTV-KDLIGFGLQVAKGMKYL 141
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP-- 490
S K H +L + N ++ ++ + K+ +FG + ++ + N + P
Sbjct: 142 A----SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 491 ----EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWV---RMVVD 543
E + ++ T K+DV+ FG++L E++T P P + + D++ ++ R ++
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQGRRLLQ 250
Query: 544 NDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
++ D L E+ L+C E RP SE++ RI I
Sbjct: 251 PEYCPD-----------------PLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 315 DDLLRASAEV-----LGKGKVGSTYKAT--LESGAVVAVKRVKNMNA-----LSKKEFVQ 362
D L RA + +G+G G +KA G VA+KRV+ LS V
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 363 QMQLLGKLKHENLAKIVSF----YYSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAW 417
++ L +H N+ ++ +E KL +++E + DL V +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPT 119
Query: 418 TTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS 477
T ++ Q +GL FLH SH+V H +LK NIL+ I KL +FG +
Sbjct: 120 ETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQI---KLADFGLARIYSF 172
Query: 478 RKASENLAIG---RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDL 534
+ A ++ + R+PE D++ G I E+ + GS ++ G +
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKI 231
Query: 535 SDWVRMVVDNDWSTDI-LDVEILAAREGQNEMLRLT-------ELALECTDIAPEKR 583
D + + + DW D+ L + ++ Q +T +L L+C P KR
Sbjct: 232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 118/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 75 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLE- 128
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFG---FLPLLPSRKASE-NLAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG ++ KAS+ L I +PE
Sbjct: 129 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE 182
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 240
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 241 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 77 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 130
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASEN-LAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 131 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 184
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + + +
Sbjct: 185 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 244
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSE 588
+ + R TEL + + I E++ + E
Sbjct: 245 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 281
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 360 FVQQMQLLGKLKHENLAKIVSFYYSKEEKL-------IIYEFLPNGSLFDLLHESRGVGR 412
F ++ Q L H IV+ Y + E + I+ E++ +L D++H + G
Sbjct: 59 FRREAQNAAALNHP---AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEG--- 111
Query: 413 IPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFL 472
P+ + +I + L F HQ + + H ++K +NI+I N + K+ +FG
Sbjct: 112 -PMTPKRAIEVIADACQALNFSHQ----NGIIHRDVKPANIMISATNAV---KVMDFGIA 163
Query: 473 PLLPSRKAS---ENLAIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ S IG SPE G + ++DVY G +L EV+TG P G
Sbjct: 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 40/297 (13%)
Query: 315 DDLLRASAEV-----LGKGKVGSTYKAT--LESGAVVAVKRVKNMNA-----LSKKEFVQ 362
D L RA + +G+G G +KA G VA+KRV+ LS V
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 363 QMQLLGKLKHENLAKIVSF----YYSKEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAW 417
++ L +H N+ ++ +E KL +++E + DL V +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPT 119
Query: 418 TTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS 477
T ++ Q +GL FLH SH+V H +LK NIL+ I KL +FG +
Sbjct: 120 ETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQI---KLADFGLARIYSF 172
Query: 478 RKASENLAIG---RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDL 534
+ A ++ + R+PE D++ G I E+ + GS ++ G +
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKI 231
Query: 535 SDWVRMVVDNDWSTDI-LDVEILAAREGQNEMLRLT-------ELALECTDIAPEKR 583
D + + + DW D+ L + ++ Q +T +L L+C P KR
Sbjct: 232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 22/277 (7%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 77
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 78 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 131
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASEN-LAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 132 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 185
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + + +
Sbjct: 186 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY 245
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSE 588
+ + R TEL + + I E++ + E
Sbjct: 246 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQEE 282
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H +L + N ++ + + K+ +FG + RK + L R
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 249
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P RP E++ +++
Sbjct: 250 Y----LD-------QPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 360 FVQQMQLLGKLKHENLAKIVSFYYSKEEK-------LIIYEFLPNGSLFDLLHESRGVGR 412
F ++ Q L H IV+ Y + E + I+ E++ +L D++H
Sbjct: 76 FRREAQNAAALNHP---AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---- 128
Query: 413 IPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFL 472
P+ + +I + L F HQ + + H ++K +NI+I N + K+ +FG
Sbjct: 129 -PMTPKRAIEVIADACQALNFSHQ----NGIIHRDVKPANIMISATNAV---KVMDFGIA 180
Query: 473 PLLPSRKAS---ENLAIGR----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ S IG SPE G + ++DVY G +L EV+TG P G
Sbjct: 181 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H +L + N ++ + + K+ +FG + RK + L R
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 249
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P+ RP E++ +++
Sbjct: 250 Y----LD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H +L + N ++ + + K+ +FG + RK + L R
Sbjct: 145 YLN----AKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 249
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P+ RP E++ +++
Sbjct: 250 Y----LD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 30/212 (14%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENL 375
+ LG G G E +G VAVK ++++++ + K +++Q L +H ++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRHPHI 78
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
K+ + + ++ E++ G LFD + ++ GR+ + RL +Q G+ + H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKN---GRLDEKESRRL--FQQILSGVDYCH 133
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK------ASENLAIGRS 489
+ H V H +LK N+L+ + AK+ +FG ++ + S N A +
Sbjct: 134 R----HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYA---A 183
Query: 490 PEFPEGKRLTH-KADVYCFGIILLEVITGRIP 520
PE G+ + D++ G+IL ++ G +P
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 75 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 128
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASE-NLAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 129 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 240
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 241 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 67/304 (22%)
Query: 323 EVLGKGKVGSTYKATL------ESGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENL 375
E LG+ + G YK L E VA+K +K+ ++EF + L +L+H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLL-----HESRG------VGRIPLAWTTRLSII 424
++ + +I+ + +G L + L H G + L + ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 425 KQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFL------------ 472
Q A G+ + L SH V H +L + N+L++ D K+++ G
Sbjct: 152 AQIAAGMEY----LSSHHVVHKDLATRNVLVY---DKLNVKISDLGLFREVYAADYYKLL 204
Query: 473 --PLLPSR-KASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNE 529
LLP R A E + G + + +D++ +G++L EV + + P
Sbjct: 205 GNSLLPIRWMAPEAIMYG---------KFSIDSDIWSYGVVLWEVFSYGL----QPYCGY 251
Query: 530 TSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEV 589
++ D+ + +R + ++L + + L +EC + P +RP+ ++
Sbjct: 252 SNQDVVEMIR------------NRQVLPCPDDCPAW--VYALMIECWNEFPSRRPRFKDI 297
Query: 590 LRRI 593
R+
Sbjct: 298 HSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 123/304 (40%), Gaps = 67/304 (22%)
Query: 323 EVLGKGKVGSTYKATL------ESGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENL 375
E LG+ + G YK L E VA+K +K+ ++EF + L +L+H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLL-----HESRG------VGRIPLAWTTRLSII 424
++ + +I+ + +G L + L H G + L + ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 425 KQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFL------------ 472
Q A G+ + L SH V H +L + N+L++ D K+++ G
Sbjct: 135 AQIAAGMEY----LSSHHVVHKDLATRNVLVY---DKLNVKISDLGLFREVYAADYYKLL 187
Query: 473 --PLLPSR-KASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNE 529
LLP R A E + G + + +D++ +G++L EV + + P
Sbjct: 188 GNSLLPIRWMAPEAIMYG---------KFSIDSDIWSYGVVLWEVFSYGL----QPYCGY 234
Query: 530 TSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEV 589
++ D+ + +R + ++L + + L +EC + P +RP+ ++
Sbjct: 235 SNQDVVEMIR------------NRQVLPCPDDCPAW--VYALMIECWNEFPSRRPRFKDI 280
Query: 590 LRRI 593
R+
Sbjct: 281 HSRL 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 123/290 (42%), Gaps = 45/290 (15%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E+ VAVK V +L ++ EF+ + ++ ++ +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----GVGRIPLAWTTRLSIIKQTAKGLA 432
++ + L++ E + +G L L R GR P + + + A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR 488
+L+ + K H +L + N ++ + + K+ +FG + RK + L R
Sbjct: 144 YLN----AKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDND 545
+PE + T +D++ FG++L E+ + P G +NE ++ V+D
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL--SNEQV------LKFVMDGG 248
Query: 546 WSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEE 595
+ LD + N R+T+L C P+ RP E++ +++
Sbjct: 249 Y----LD-------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G G+ A +GA VA+K++ + L K ++++LL ++HEN+ ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 382 YYSKE------EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ E + ++ F+ + HE G RI ++ Q KGL ++H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYIH 145
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL---AIGRSPEF 492
+ + H +LK N+ + N+ K+ +FG +R+A + + R
Sbjct: 146 ----AAGIIHRDLKPGNLAV---NEDCELKILDFGL-----ARQADSEMXGXVVTRWYRA 193
Query: 493 PE----GKRLTHKADVYCFGIILLEVITGRIPGNGS 524
PE R T D++ G I+ E+ITG+ GS
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 75 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 128
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASE-NLAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 129 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 240
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 241 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 102
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 103 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 156
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASEN-LAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 157 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 210
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 211 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 268
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 269 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 32/216 (14%)
Query: 323 EVLGKGKVGSTY---KATL-ESGAVVAVKRVKNMNALSKKEFVQQMQ--LLGKLKHENLA 376
+VLG+G G + K T +SG + A+K +K + +M+ +L + H +
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ + ++ + +I +FL G LF L + + +T +K LA
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-------VMFTE--EDVKFYLAELALGLD 144
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS------- 489
LHS + + +LK NIL+ E I KLT+FG S++A ++ S
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHI---KLTDFGL-----SKEAIDHEKKAYSFCGTVEY 196
Query: 490 --PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
PE + +H AD + +G+++ E++TG +P G
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 455 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLE- 508
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASE-NLAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 509 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 620
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 621 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRVK--NMNALSKKEFVQQMQLLGKLKHENLAKIV 379
+ +GKG A + +G VAVK + +N+ S ++ +++++ L H N+ K+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+++ ++ E+ G +FD L V + +Q + + HQ
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYL-----VAHGRXKEKEARAKFRQIVSAVQYCHQKF- 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----------- 488
+ H +LK+ N+L+ + +I K+ +FGF S G
Sbjct: 134 ---IVHRDLKAENLLLDADXNI---KIADFGF---------SNEFTFGNKLDAFCGAPPY 178
Query: 489 -SPEFPEGKRLTH-KADVYCFGIILLEVITGRIPGNGS 524
+PE +GK+ + DV+ G+IL +++G +P +G
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 80 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLE- 133
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASEN-LAIG-RSPE 491
S + H ++ + N+L+ ND KL +FG + KAS+ L I +PE
Sbjct: 134 ---SKRFVHRDIAARNVLV-SSNDC--VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 187
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 188 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 245
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 246 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 35/221 (15%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMN-ALSKKEFVQQMQLLGKLKHENLAKIVS 380
+ LG+G G ++A + A+KR++ N L++++ +++++ L KL+H + + +
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGV-------GRIPLAWTTR---LSIIKQTAKG 430
+ K + P L+ + R GR + R L I Q A+
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF----------------LPL 474
+ FLH S + H +LK SNI F +D+ K+ +FG +P
Sbjct: 131 VEFLH----SKGLMHRDLKPSNIF-FTMDDV--VKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 475 LPSRKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVI 515
+ SPE G +HK D++ G+IL E++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR--SP 490
L+++K H +L + N ++ + + K+ +FG + RK + L R SP
Sbjct: 138 YLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + T +DV+ FG++L E+ T
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 75 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLE- 128
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASEN-LAIG-RSPE 491
S + H ++ + N+L+ + + KL +FG + KAS+ L I +PE
Sbjct: 129 ---SKRFVHRDIAARNVLVSATDCV---KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 182
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 183 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 240
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 241 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQ---QMQLLGKLKHENLAKIV 379
E LGKG + ++ + ++ N LS ++F + + ++ KL+H N+ ++
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q + +A+ H
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCH---- 121
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSPEFPEGK 496
S+ + H NLK N+L+ + KL +FG + +A A SPE +
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 181
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ D++ G+IL ++ G P
Sbjct: 182 PYSKPVDIWACGVILYILLVGYPP 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 63 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 177
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 178 ARNVLVTEDNVM---KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP 257
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQ---QMQLLGKLKHENLAKIV 379
E LGKG + ++ + ++ N LS ++F + + ++ KL+H N+ ++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q + +A+ H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCH---- 122
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSPEFPEGK 496
S+ + H NLK N+L+ + KL +FG + +A A SPE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ D++ G+IL ++ G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 58/294 (19%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKI 378
LG+G G + +G VAVK +K + + + +++++L L HEN+ K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 379 VSFYYSKEEKLI--IYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
I I EFLP+GSL + L +++ +I L + ++ Q KG+ +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAV--QICKGMDY--- 141
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR-------S 489
L S + H +L + N+L+ E+ + K+ +FG + + K + R +
Sbjct: 142 -LGSRQYVHRDLAARNVLVESEHQV---KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
PE + +DV+ FG+ L E++T D+D S
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT------------------------YCDSDSSPM 233
Query: 550 ILDVEILAAREGQNEMLRLTEL-----ALECTDIAPEKRPKMSEVLRRIEEIQP 598
L ++++ GQ + RL L C P+ ++ +++R+ E QP
Sbjct: 234 ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD---EVYQLMRKCWEFQP 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS----RKASENLAIGR--SP 490
L+++K H +L + N ++ + + K+ +FG + RK + L R SP
Sbjct: 147 YLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + T +DV+ FG++L E+ T
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 52/291 (17%)
Query: 325 LGKGKVGSTYKATLE-----SGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKI 378
LG+G G + +G VAVK +K + + + +++++L L HEN+ K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 379 VSFYYSKEEKLI--IYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
I I EFLP+GSL + L +++ +I L + ++ Q KG+ +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAV--QICKGMDY--- 129
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR-------S 489
L S + H +L + N+L+ E+ + K+ +FG + + K + R +
Sbjct: 130 -LGSRQYVHRDLAARNVLVESEHQV---KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTD 549
PE + +DV+ FG+ L E++T D+D S
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT------------------------YCDSDSSPM 221
Query: 550 ILDVEILAAREGQNEMLRLTELALECTDI-APEKRP-KMSEVLRRIEEIQP 598
L ++++ GQ + RL E + P P ++ +++R+ E QP
Sbjct: 222 ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQP 272
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 208
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 209 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 256
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 257 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 304
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQ---QMQLLGKLKHENLAKIV 379
E LGKG + ++ + ++ N LS ++F + + ++ KL+H N+ ++
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q + +A+ H
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCH---- 122
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSPEFPEGK 496
S+ + H NLK N+L+ + KL +FG + +A A SPE +
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 182
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ D++ G+IL ++ G P
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPP 206
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 48 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 162
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 163 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 220 VWSFGVLLWEIFTLGGSPYPGVP 242
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 63 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 177
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 178 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP 257
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 199
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 200 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 247
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 248 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 295
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 202
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 203 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 250
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 251 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 298
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 201
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 202 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 249
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 250 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 297
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 24/209 (11%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFV-----QQMQLLGKLKHENLA 376
+ LG+G+ + YKA + + +VA+K++K + K+ + ++++LL +L H N+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + K ++++F+ +++ + + P + + + T +GL +LHQ
Sbjct: 76 GLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTP---SHIKAYMLMTLQGLEYLHQ 130
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL--PSRKASENLAIG--RSPEF 492
H + H +LK +N+L+ EN + KL +FG P+R + R+PE
Sbjct: 131 ----HWILHRDLKPNNLLL-DENGVL--KLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 493 PEGKRLTH-KADVYCFGIILLEVITGRIP 520
G R+ D++ G IL E++ R+P
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELLL-RVP 211
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 56 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 170
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 171 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPGVP 250
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 31/211 (14%)
Query: 325 LGKGKVGSTYKATLESGAVVAVK----RVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+G+G + YK L++ V V + + + ++ F ++ + L L+H N IV
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN---IVR 89
Query: 381 FYYSKEEKL-------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
FY S E + ++ E +G+L L + V +I + S +Q KGL F
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVL----RSWCRQILKGLQF 144
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEF- 492
LH + + H +LK NI I K+ + G L ++AS A+ +PEF
Sbjct: 145 LH--TRTPPIIHRDLKCDNIFI--TGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFX 197
Query: 493 -PEG--KRLTHKADVYCFGIILLEVITGRIP 520
PE ++ DVY FG LE T P
Sbjct: 198 APEXYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 63 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 177
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 178 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP 257
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 52 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 166
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 167 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPGVP 246
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 201
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 202 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 249
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 250 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 297
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 195
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 196 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 243
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 244 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 291
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 117/285 (41%), Gaps = 40/285 (14%)
Query: 322 AEVLGKGKVGSTYKATLES----GAVVAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLA 376
+G+G+ G ++ S VA+K KN + S +E F+Q+ + + H ++
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K++ ++ II E G L L V + L + + Q + LA+L
Sbjct: 455 KLIGVI-TENPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLE- 508
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KASE-NLAIG-RSPE 491
S + H ++ + N+L+ + + KL +FG + KAS+ L I +PE
Sbjct: 509 ---SKRFVHRDIAARNVLVSATDCV---KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPE 562
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDIL 551
+R T +DV+ FG+ + E++ + NN+ G + + R+ + +
Sbjct: 563 SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPT-- 620
Query: 552 DVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
L L +C P +RP+ +E+ ++ I
Sbjct: 621 ----------------LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 323 EVLGKGKVGSTYKATL-ESGAV-------VAVKRVKNMNALSKKEFVQQMQLLGKLKHEN 374
E LG+G +K E G V +K + + + F + ++ KL H++
Sbjct: 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 375 LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
L + +E +++ EF+ GSL L +++ I + W +L + KQ A + FL
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNC--INILW--KLEVAKQLAWAMHFL 129
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRA-----KLTNFGF-LPLLPSRKASENLAIGR 488
+ + + H N+ + NIL+ RE D KL++ G + +LP E +
Sbjct: 130 EE----NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP-WV 184
Query: 489 SPEFPEG-KRLTHKADVYCFGIILLEVITG 517
PE E K L D + FG L E+ +G
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 55 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L R G L+ +S Q A+G+ +L S K H +L
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 169
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 170 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPGVP 249
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 323 EVLGKGKVGSTYKATL----ESGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+++G G G L + VA+K +K +++F+ + ++G+ H N+ +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ +I+ E++ NGSL L G I + +++ G+ +L
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI----MQLVGMLRGVGAGMRYLSDL 170
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSP 490
+ H+ +L + N+L+ + K+++FG +L + G +P
Sbjct: 171 GYVHR----DLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + + +DV+ FG+++ EV+
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 15/204 (7%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQ---QMQLLGKLKHENLAKIV 379
E LGKG + ++ + ++ N LS ++F + + ++ KL+H N+ ++
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q + +A+ H
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCH---- 145
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSPEFPEGK 496
S+ + H NLK N+L+ + KL +FG + +A A SPE +
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD 205
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ D++ G+IL ++ G P
Sbjct: 206 PYSKPVDIWACGVILYILLVGYPP 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKE--FVQQMQLLGKLKHENLAKIV 379
E LG G A + +G + AVK + AL KE ++ +L K+KHEN+ +
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPK-KALKGKESSIENEIAVLRKIKHENIVALE 86
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
Y S ++ + + G LFD + E +G A T +I+Q + +LH+
Sbjct: 87 DIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDAST----LIRQVLDAVYYLHRM-- 139
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
+ H +LK N+L + +++ + +++FG L + + + A G +PE
Sbjct: 140 --GIVHRDLKPENLLYYSQDEESKIMISDFG-LSKMEGKGDVMSTACGTPGYVAPEVLAQ 196
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
K + D + G+I ++ G P
Sbjct: 197 KPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 280 AHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE 339
A +SE ++P+ E P R+ L K + ++ A A L K K K
Sbjct: 51 AGVSEYELPEDPRWELPRDRLVL---GKPLGEGAFGQVVLAEAIGLDKDKPNRVTK---- 103
Query: 340 SGAVVAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLP 396
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+
Sbjct: 104 ----VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 158
Query: 397 NGSLFDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPH 445
G+L + L R G L+ +S Q A+G+ +L S K H
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIH 214
Query: 446 ANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLT 499
+L + N+L+ +N + K+ +FG + + GR +PE + T
Sbjct: 215 RDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 271
Query: 500 HKADVYCFGIILLEVIT-GRIPGNGSP 525
H++DV+ FG++L E+ T G P G P
Sbjct: 272 HQSDVWSFGVLLWEIFTLGGSPYPGVP 298
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N ++ + DIY G LLP R S
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 230
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 231 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 278
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 279 ----GLLD-------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 326
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 323 EVLGKGKVGSTYKATL----ESGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAK 377
+++G G G L + VA+K +K +++F+ + ++G+ H N+ +
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ +I+ E++ NGSL L G I + +++ G+ +L
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI----MQLVGMLRGVGAGMRYLSDL 170
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-------RSP 490
+ H+ +L + N+L+ + K+++FG +L + G +P
Sbjct: 171 GYVHR----DLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
Query: 491 EFPEGKRLTHKADVYCFGIILLEVIT 516
E + + +DV+ FG+++ EV+
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 21/173 (12%)
Query: 48 TGPPCIDNVSNWFGVSCSNGHI---------------VSLELEEIQLAGILPPGFLQNIT 92
T PP I ++ N G++ I S+ + +L G +PP F N+
Sbjct: 140 TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTF-ANLN 198
Query: 93 FXXXXXXXXXXXXXXXXXXXXXVNLETVFLSQNHFSDGIPFGYIDLPK-LKKLELQENYL 151
N + + L++N + G + L K L L+L+ N +
Sbjct: 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA--FDLGKVGLSKNLNGLDLRNNRI 256
Query: 152 DGQIPP-FNQTSLI-DFNVSYNNLDGPIPQTRVVQSFPSSSFEHNSGLCGRPL 202
G +P Q + NVS+NNL G IPQ +Q F S++ +N LCG PL
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 11/166 (6%)
Query: 24 PAERYDLLQIRDSLNSTANLHSRWTGPPCIDNVSNWFGVSCSNG----HIVSLELEEIQL 79
P ++ LLQI+ L + L S C + W GV C + +L+L + L
Sbjct: 5 PQDKQALLQIKKDLGNPTTLSSWLPTTDCCNRT--WLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 80 AGILP-PGFLQNITFXXXXXXXXXXXXXXXX--XXXXXVNLETVFLSQNHFSDGIPFGYI 136
P P L N+ + L ++++ + S IP
Sbjct: 63 PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122
Query: 137 DLPKLKKLELQENYLDGQIPPFNQT--SLIDFNVSYNNLDGPIPQT 180
+ L L+ N L G +PP + +L+ N + G IP +
Sbjct: 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 32/222 (14%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
EV +G+ G +KA L + VAVK + S + + L G +KHEN+ + +
Sbjct: 30 EVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPG-MKHENILQFIGAE 87
Query: 383 YSKE----EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +I F GSL D L + ++W I + A+GLA+LH+ +
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDI 141
Query: 439 ------HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL--AIGR-- 488
H + H ++KS N+L+ +N++ A + +FG + K++ + +G
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLL--KNNL-TACIADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 489 --SPEFPEG-----KRLTHKADVYCFGIILLEVITGRIPGNG 523
+PE EG + + D+Y G++L E+ + +G
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 394 FLPNGSLFDLLHE--SRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSS 451
F + SL D+ E S G + P+ +S Q A+G+ FL S K H +L +
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLS----SRKCIHRDLAAR 228
Query: 452 NILIFRENDIYRAKLTNFGFLPLLPS-----RKASENLAIG-RSPEFPEGKRLTHKADVY 505
NIL+ EN++ K+ +FG + RK L + +PE K + K+DV+
Sbjct: 229 NILL-SENNV--VKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVW 285
Query: 506 CFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEM 565
+G++L E+ + + G+ PG + +D D+ + + E + R +
Sbjct: 286 SYGVLLWEIFS--LGGSPYPG-------------VQMDEDFCSRLR--EGMRMRAPEYST 328
Query: 566 LRLTELALECTDIAPEKRPKMSEVLRRIEEI 596
+ ++ L+C P++RP+ +E++ ++ ++
Sbjct: 329 PEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 48/299 (16%)
Query: 325 LGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKK-EFVQQMQLLGKLKHENLAK 377
LG+G G Y+ E VA+K V ++ ++ EF+ + ++ + ++ +
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
++ + L+I E + G L L R + P+ LS + Q A +A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 437 TLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLPSRKASENLA 485
L+++K H +L + N + + DIY G LLP R S
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS---- 195
Query: 486 IGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDN 544
PE + T +DV+ FG++L E+ T P G +NE +R V++
Sbjct: 196 ----PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQV------LRFVMEG 243
Query: 545 DWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI-EEIQPMIEE 602
+LD + N L EL C P+ RP E++ I EE++P E
Sbjct: 244 ----GLLD-------KPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 291
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 67
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 68 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 121
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 122 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 219
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 53/302 (17%)
Query: 322 AEVLGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT ++ VAVK +K L+++E + ++++L L H
Sbjct: 46 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 105
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRG-------------VGRIPLAWTTR 420
N+ ++ L+I E+ G L + L R + L
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-- 478
LS Q AKG+AFL S H +L + NIL+ K+ +FG + +
Sbjct: 166 LSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGRI---TKICDFGLARDIKNDSN 218
Query: 479 ---KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGD 533
K + L + +PE T ++DV+ +GI L E+ + G P G P +++
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278
Query: 534 LSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
+ + RM L+ EM + + C D P KRP ++++ I
Sbjct: 279 IKEGFRM---------------LSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 320
Query: 594 EE 595
E+
Sbjct: 321 EK 322
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 53/302 (17%)
Query: 322 AEVLGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT ++ VAVK +K L+++E + ++++L L H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRG-------------VGRIPLAWTTR 420
N+ ++ L+I E+ G L + L R + L
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-- 478
LS Q AKG+AFL S H +L + NIL+ K+ +FG + +
Sbjct: 171 LSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGRI---TKICDFGLARHIKNDSN 223
Query: 479 ---KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGD 533
K + L + +PE T ++DV+ +GI L E+ + G P G P +++
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 534 LSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
+ + RM L+ EM + + C D P KRP ++++ I
Sbjct: 284 IKEGFRM---------------LSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 325
Query: 594 EE 595
E+
Sbjct: 326 EK 327
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%)
Query: 324 VLGKGKVGSTYKATLESGAV----VAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLAKI 378
+LG+G G Y+ + VAVK K L KE F+ + ++ L H ++ K+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +E II E P G L L ++ ++ T + Q K +A+L
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLE--- 126
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KAS-ENLAIG-RSPEFP 493
S H ++ NIL+ + KL +FG + KAS L I SPE
Sbjct: 127 -SINCVHRDIAVRNILVASPECV---KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 494 EGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILD 552
+R T +DV+ F + + E+++ G+ P W+ + D++
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPFF--------------WLE-------NKDVIG 221
Query: 553 VEILAAREGQNEML--RLTELALECTDIAPEKRPKMSEVLRRIEEIQPM 599
V R + ++ L L C D P RP+ +E++ + ++ M
Sbjct: 222 VLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV----QQMQLLGKLKHENLAKIVSFYY 383
GKV Y T +G VA+K + N L+K + +++ L L+H ++ K+
Sbjct: 28 GKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 84
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
SK+E +++ E+ N LFD + V R ++ +Q + + H+ HK+
Sbjct: 85 SKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHR----HKI 134
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPL------LPSRKASENLAIGRSPEFPEGKR 497
H +LK N+L+ ++ K+ +FG + L + S N A +PE GK
Sbjct: 135 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA---APEVISGKL 188
Query: 498 LTH-KADVYCFGIILLEVITGRIP 520
+ DV+ G+IL ++ R+P
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%)
Query: 324 VLGKGKVGSTYKATLESGAV----VAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLAKI 378
+LG+G G Y+ + VAVK K L KE F+ + ++ L H ++ K+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +E II E P G L L ++ ++ T + Q K +A+L
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLE--- 130
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KAS-ENLAIG-RSPEFP 493
S H ++ NIL+ + KL +FG + KAS L I SPE
Sbjct: 131 -SINCVHRDIAVRNILVASPECV---KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 494 EGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILD 552
+R T +DV+ F + + E+++ G+ P W+ + D++
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPFF--------------WLE-------NKDVIG 225
Query: 553 VEILAAREGQNEML--RLTELALECTDIAPEKRPKMSEVLRRIEEIQPM 599
V R + ++ L L C D P RP+ +E++ + ++ M
Sbjct: 226 VLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV----QQMQLLGKLKHENLAKIVSFYY 383
GKV Y T +G VA+K + N L+K + +++ L L+H ++ K+
Sbjct: 27 GKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 83
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
SK+E +++ E+ N LFD + V R ++ +Q + + H+ HK+
Sbjct: 84 SKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHR----HKI 133
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPL------LPSRKASENLAIGRSPEFPEGKR 497
H +LK N+L+ ++ K+ +FG + L + S N A +PE GK
Sbjct: 134 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA---APEVISGKL 187
Query: 498 LTH-KADVYCFGIILLEVITGRIP 520
+ DV+ G+IL ++ R+P
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIVS 380
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 69
Query: 381 FYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHGI 124
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-PE 494
+ H ++K N+L+ +++ K+++FG + +R+ N G P PE
Sbjct: 125 ----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 495 --GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
+R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 360 FVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTT 419
F + ++ KL H++L +E +++ EF+ GSL L +++ I + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILW-- 114
Query: 420 RLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRA-----KLTNFGF-LP 473
+L + KQ A + FL + + + H N+ + NIL+ RE D KL++ G +
Sbjct: 115 KLEVAKQLAAAMHFLEE----NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT 170
Query: 474 LLPSRKASENLAIGRSPEFPEG-KRLTHKADVYCFGIILLEVITG 517
+LP E + PE E K L D + FG L E+ +G
Sbjct: 171 VLPKDILQERIP-WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%)
Query: 324 VLGKGKVGSTYKATLESGAV----VAVKRVKNMNALSKKE-FVQQMQLLGKLKHENLAKI 378
+LG+G G Y+ + VAVK K L KE F+ + ++ L H ++ K+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ +E II E P G L L ++ ++ T + Q K +A+L
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLE--- 142
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR---KAS-ENLAIG-RSPEFP 493
S H ++ NIL+ + KL +FG + KAS L I SPE
Sbjct: 143 -SINCVHRDIAVRNILVASPECV---KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 494 EGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILD 552
+R T +DV+ F + + E+++ G+ P W+ + D++
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPFF--------------WLE-------NKDVIG 237
Query: 553 VEILAAREGQNEML--RLTELALECTDIAPEKRPKMSEVLRRIEEIQPM 599
V R + ++ L L C D P RP+ +E++ + ++ M
Sbjct: 238 VLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 286
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 53/302 (17%)
Query: 322 AEVLGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT ++ VAVK +K L+++E + ++++L L H
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 87
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRG-------------VGRIPLAWTTR 420
N+ ++ L+I E+ G L + L R + L
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-- 478
LS Q AKG+AFL S H +L + NIL+ K+ +FG + +
Sbjct: 148 LSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGR---ITKICDFGLARDIKNDSN 200
Query: 479 ---KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGD 533
K + L + +PE T ++DV+ +GI L E+ + G P G P +++
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
Query: 534 LSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
+ + RM L+ EM + + C D P KRP ++++ I
Sbjct: 261 IKEGFRM---------------LSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 302
Query: 594 EE 595
E+
Sbjct: 303 EK 304
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 29/189 (15%)
Query: 337 TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLP 396
L+ VV +K+V++ N + +L + H + ++ + ++ +I +++
Sbjct: 38 VLKKEIVVRLKQVEHTN--------DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE 89
Query: 397 NGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIF 456
G LF LL +S+ R P + K A + + LHS + + +LK NIL+
Sbjct: 90 GGELFSLLRKSQ---RFPNP------VAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD 140
Query: 457 RENDIYRAKLTNFGFLPLLPSRK-----ASENLAIGRSPEFPEGKRLTHKADVYCFGIIL 511
+ I K+T+FGF +P + +A PE K D + FGI++
Sbjct: 141 KNGHI---KITDFGFAKYVPDVTYXLCGTPDYIA----PEVVSTKPYNKSIDWWSFGILI 193
Query: 512 LEVITGRIP 520
E++ G P
Sbjct: 194 YEMLAGYTP 202
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 53/302 (17%)
Query: 322 AEVLGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT ++ VAVK +K L+++E + ++++L L H
Sbjct: 44 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 103
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRG-------------VGRIPLAWTTR 420
N+ ++ L+I E+ G L + L R + L
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-- 478
LS Q AKG+AFL S H +L + NIL+ K+ +FG + +
Sbjct: 164 LSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGR---ITKICDFGLARDIKNDSN 216
Query: 479 ---KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGD 533
K + L + +PE T ++DV+ +GI L E+ + G P G P +++
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276
Query: 534 LSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
+ + RM L+ EM + + C D P KRP ++++ I
Sbjct: 277 IKEGFRM---------------LSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 318
Query: 594 EE 595
E+
Sbjct: 319 EK 320
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIVS 380
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK--- 68
Query: 381 FYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHGI 123
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-PE 494
+ H ++K N+L+ +++ K+++FG + +R+ N G P PE
Sbjct: 124 ----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 495 --GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
+R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV----QQMQLLGKLKHENLAKIVSFYY 383
GKV Y T +G VA+K + N L+K + +++ L L+H ++ K+
Sbjct: 22 GKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 78
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
SK+E +++ E+ N LFD + V R ++ +Q + + H+ HK+
Sbjct: 79 SKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHR----HKI 128
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPL------LPSRKASENLAIGRSPEFPEGKR 497
H +LK N+L+ ++ K+ +FG + L + S N A +PE GK
Sbjct: 129 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA---APEVISGKL 182
Query: 498 LTH-KADVYCFGIILLEVITGRIP 520
+ DV+ G+IL ++ R+P
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 53/302 (17%)
Query: 322 AEVLGKGKVGSTYKATL------ESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT ++ VAVK +K L+++E + ++++L L H
Sbjct: 51 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHM 110
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRG-------------VGRIPLAWTTR 420
N+ ++ L+I E+ G L + L R + L
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-- 478
LS Q AKG+AFL S H +L + NIL+ K+ +FG + +
Sbjct: 171 LSFSYQVAKGMAFLA----SKNCIHRDLAARNILLTHGRI---TKICDFGLARDIKNDSN 223
Query: 479 ---KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGD 533
K + L + +PE T ++DV+ +GI L E+ + G P G P +++
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 534 LSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
+ + RM L+ EM + + C D P KRP ++++ I
Sbjct: 284 IKEGFRM---------------LSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLI 325
Query: 594 EE 595
E+
Sbjct: 326 EK 327
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKNMNALSKKEFV----QQMQLLGKLKHENLAKIVSFYY 383
GKV Y T +G VA+K + N L+K + +++ L L+H ++ K+
Sbjct: 18 GKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 74
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKV 443
SK+E +++ E+ N LFD + V R ++ +Q + + H+ HK+
Sbjct: 75 SKDEIIMVIEYAGN-ELFDYI-----VQRDKMSEQEARRFFQQIISAVEYCHR----HKI 124
Query: 444 PHANLKSSNILIFRENDIYRAKLTNFGFLPL------LPSRKASENLAIGRSPEFPEGKR 497
H +LK N+L+ ++ K+ +FG + L + S N A +PE GK
Sbjct: 125 VHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA---APEVISGKL 178
Query: 498 LTH-KADVYCFGIILLEVITGRIP 520
+ DV+ G+IL ++ R+P
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 323 EVLGKGKVGSTYKATLESGA----VVAVKRVKNMNALSKKEFVQQMQ--LLGKLKHENLA 376
+VLG+G G + SG+ + A+K +K + +M+ +L ++ H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ + ++ + +I +FL G LF L + + +T +K LA
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-------VMFTE--EDVKFYLAELALALD 140
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF 492
LHS + + +LK NIL+ E I KLT+FG + G +PE
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHI---KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 493 PEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ T AD + FG+++ E++TG +P G
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 323 EVLGKGKVGSTYKATLESGA----VVAVKRVKNMNALSKKEFVQQMQ--LLGKLKHENLA 376
+VLG+G G + SG+ + A+K +K + +M+ +L ++ H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ + ++ + +I +FL G LF L + + +T +K LA
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-------VMFTE--EDVKFYLAELALALD 140
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF 492
LHS + + +LK NIL+ E I KLT+FG + G +PE
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHI---KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 197
Query: 493 PEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ T AD + FG+++ E++TG +P G
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 323 EVLGKGKVGSTYKATLESGA----VVAVKRVKNMNALSKKEFVQQMQ--LLGKLKHENLA 376
+VLG+G G + SG+ + A+K +K + +M+ +L ++ H +
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 377 KIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
K+ + ++ + +I +FL G LF L + + +T +K LA
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-------VMFTE--EDVKFYLAELALALD 141
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF 492
LHS + + +LK NIL+ E I KLT+FG + G +PE
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHI---KLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV 198
Query: 493 PEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ T AD + FG+++ E++TG +P G
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSXQEYSDW 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGK-LKHENLAKIV 379
+ LG+G G A + VAVK V A+ E +++ + K L HEN+ K
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK-- 68
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 69 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 123 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 26/240 (10%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNA-----LSKKEFVQQMQLLGKLKHENLAKI 378
+G G G+ YKA SG VA+K V+ N +S V ++ L +H N+ ++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 379 VSFYYS----KEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+ + +E K+ +++E + + L L ++ G L T +++Q +GL F
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSP 490
LH ++ + H +LK NIL+ + KL +FG + + A + + + R+P
Sbjct: 128 LH----ANCIVHRDLKPENILVTSGGTV---KLADFGLARIYSYQMALDPVVVTLWYRAP 180
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDI 550
E D++ G I E+ R P + G + D + + ++DW D+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 29/211 (13%)
Query: 325 LGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKE-----FVQQMQLLGKLKHENLAKI 378
LG+G + YK + + +VA+K ++ L +E ++++ LL LKH N+ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
++++ +++E+L DL G I +L + Q +GLA+ H+
Sbjct: 66 HDIIHTEKSLTLVFEYLDK----DLKQYLDDCGNIINMHNVKLFLF-QLLRGLAYCHR-- 118
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSPEFPE 494
KV H +LK N+LI N+ KL +FG +P++ + R P+
Sbjct: 119 --QKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 495 GKR-LTHKADVYCFGIILLEVITGR--IPGN 522
G + + D++ G I E+ TGR PG+
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGS 204
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 29/203 (14%)
Query: 344 VAVKRVKNMNALSK--KEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSL 400
VAVK +K+ +A K + + +M+++ + KH+N+ ++ +I E+ G+L
Sbjct: 63 VAVKMLKS-DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 401 FDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLK 449
+ L G L+ +S Q A+G+ +L S K H +L
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA----SKKCIHRDLA 177
Query: 450 SSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR------SPEFPEGKRLTHKAD 503
+ N+L+ +N + K+ +FG + + GR +PE + TH++D
Sbjct: 178 ARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 504 VYCFGIILLEVIT-GRIPGNGSP 525
V+ FG++L E+ T G P G P
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVP 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQ-QMQLLGKLKHENLAKIV 379
+ LG+G G A + VAVK V A+ E ++ ++ + L HEN+ K
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK-- 69
Query: 380 SFYYSKEEKLIIY---EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
FY + E I Y E+ G LFD + G +P R Q G+ +LH
Sbjct: 70 -FYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRF--FHQLMAGVVYLHG 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGRSPEF-P 493
+ H ++K N+L+ +++ K+++FG + +R+ N G P P
Sbjct: 124 I----GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 494 E--GKRLTHK--ADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDW 537
E +R H DV+ GI+L ++ G +P + +++ + SDW
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP---SDSCQEYSDW 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 314 LDDLLRASAEVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLK- 371
+D+ + ++E+LG+G A +L++G AVK ++ S+ ++++ L + +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 372 HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
++N+ +++ F+ +++E L GS+ + + + + +++ A L
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-----RVVRDVAAAL 124
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNF 469
FLH + + H +LK NIL + K+ +F
Sbjct: 125 DFLH----TKGIAHRDLKPENILCESPEKVSPVKICDF 158
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG+G G ++ ++G AVK+V+ + +E V L + +IV Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGL-------SSPRIVPLYG 131
Query: 384 SKEEKL---IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ E I E L GSL L+ + +G +P L + Q +GL +LH +
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQ---MGCLPE--DRALYYLGQALEGLEYLH----T 182
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---------RSPE 491
++ H ++K+ N+L+ +D RA L +FG L ++L G +PE
Sbjct: 183 RRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
GK K D++ ++L ++ G P
Sbjct: 241 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENL 375
+ LG G G + +G VAVK ++++++ + K + +++Q L +H ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHI 73
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
K+ + + ++ E++ G LFD + + GR+ RL +Q + + H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRL--FQQILSAVDYCH 128
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL------LPSRKASENLAIGRS 489
+ H V H +LK N+L+ + AK+ +FG + L + S N A +
Sbjct: 129 R----HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA---A 178
Query: 490 PEFPEGKRLTH-KADVYCFGIILLEVITGRIP 520
PE G+ + D++ G+IL ++ G +P
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 321 SAEVLGKGKVGSTYKATLESGAV----VAVKRVKNMNALSKKE-FVQQMQLLGKLKHENL 375
S V+GKG G Y A A+K + + + + E F+++ L+ L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ E + + LP DLL R R P +S Q A+G+ +L
Sbjct: 85 LALIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTV-KDLISFGLQVARGMEYLA 141
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK--ASENLAIGRSP--- 490
+ K H +L + N ++ ++ + K+ +FG + R+ + + R P
Sbjct: 142 E----QKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 491 ---EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E + R T K+DV+ FG++L E++T P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 26/240 (10%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNA-----LSKKEFVQQMQLLGKLKHENLAKI 378
+G G G+ YKA SG VA+K V+ N +S V ++ L +H N+ ++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 379 VSFYYS----KEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+ + +E K+ +++E + + L L ++ G L T +++Q +GL F
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSP 490
LH ++ + H +LK NIL+ + KL +FG + + A + + R+P
Sbjct: 128 LH----ANCIVHRDLKPENILVTSGGTV---KLADFGLARIYSYQMALAPVVVTLWYRAP 180
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDI 550
E D++ G I E+ R P + G + D + + ++DW D+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 325 LGKGKVGSTYKATL-ESGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+G G G +K ++G V+AVK+++ + N K + + ++ LK + IV +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCF 90
Query: 383 ---YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ + I E + G+ + L + R G IP ++++ K L +L +
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKL-KKRMQGPIPERILGKMTV--AIVKALYYLKE--- 142
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKA---SENLAIGRSPEF---- 492
H V H ++K SNIL+ I KL +FG L KA S A +PE
Sbjct: 143 KHGVIHRDVKPSNILLDERGQI---KLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPP 199
Query: 493 -PEGKRLTHKADVYCFGIILLEVITGRIPGNGS------------------PGNNETSGD 533
P +ADV+ GI L+E+ TG+ P PG+ SGD
Sbjct: 200 DPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD 259
Query: 534 LSDWVRMVVDND 545
+V+ + D
Sbjct: 260 FQSFVKDCLTKD 271
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 322 AEVLGKGKVGSTYKATLE-SGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENL 375
+ LG G G + +G VAVK ++++++ + K + +++Q L +H ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHI 73
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
K+ + + ++ E++ G LFD + + GR+ RL +Q + + H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRL--FQQILSAVDYCH 128
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK------ASENLAIGRS 489
+ H V H +LK N+L+ + AK+ +FG ++ + S N A +
Sbjct: 129 R----HMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYA---A 178
Query: 490 PEFPEGKRLTH-KADVYCFGIILLEVITGRIP 520
PE G+ + D++ G+IL ++ G +P
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 314 LDDLLRASAEVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLK- 371
+D+ + +VLG+G L + AVK ++ + +++++L + +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 372 HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
H N+ +++ F+ ++ +++E + GS+ +H+ R + + +++ A L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASAL 124
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP---------------LLP 476
FLH + + H +LK NIL N + K+ +FG LL
Sbjct: 125 DFLH----NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 477 SRKASENLAIGRSPEFPEGKRLTHK-ADVYCFGIILLEVITGRIPGNGSPGNN 528
++E +A F E + K D++ G+IL +++G P G G++
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 372 HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
H ++ ++ Y S ++++ + G LFD L E ++ L+ SI++ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAV 213
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGRSP 490
+FLH ++ + H +LK NIL+ +D + +L++FGF L P K E + +P
Sbjct: 214 SFLH----ANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRE---LCGTP 263
Query: 491 EF--PEGKRL----TH-----KADVYCFGIILLEVITGRIP 520
+ PE + TH + D++ G+IL ++ G P
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 56/305 (18%)
Query: 318 LRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAK 377
L S ++LG G G+ G VAVKR+ L + M++ + ++
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPN 70
Query: 378 IVSFYYSKEEKLIIYEFLP--NGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLA 432
++ +Y S+ +Y L N +L DL+ ES+ V L +S+++Q A G+A
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDI----------YRAKLTNFGFLPLLPSRKASE 482
LH S K+ H +LK NIL+ + R +++FG L S ++S
Sbjct: 130 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 483 NLAIG--------RSPEFPE-------GKRLTHKADVYCFGIILLEVIT-GRIPGNGSPG 526
+ R+PE E +RLT D++ G + +++ G+ P G
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKY 244
Query: 527 NNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKM 586
+ E S+ +R + D + D ++A T+L + D P KRP
Sbjct: 245 SRE-----SNIIRGIFSLDEMKCLHDRSLIA---------EATDLISQMIDHDPLKRPTA 290
Query: 587 SEVLR 591
+VLR
Sbjct: 291 MKVLR 295
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 323 EVLGKGKVG----STYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
E LG+G G +T+ T + A+ + R + +++ L L+H ++ K+
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + +++ E+ G LFD + E + R++ +G F Q +
Sbjct: 75 YDVITTPTDIVMVIEY-AGGELFDYIVEKK-----------RMT----EDEGRRFFQQII 118
Query: 439 ------HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL------LPSRKASENLAI 486
H HK+ H +LK N+L+ +D K+ +FG + L + S N A
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYA- 174
Query: 487 GRSPEFPEGKRLTH-KADVYCFGIILLEVITGRIP 520
+PE GK + DV+ GI+L ++ GR+P
Sbjct: 175 --APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 35/234 (14%)
Query: 326 GKGKVGSTYKATLES-GAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYYS 384
G+G G+ +S G VA+K+V +E +Q MQ L L H N+ ++ S++Y+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 385 KEEK-------LIIYEFLPNGSLFDLLHES------RGVGRIPLAWTTRLSIIKQTAKGL 431
E+ ++ E++P D LH R V P+ + Q + +
Sbjct: 91 LGERDRRDIYLNVVMEYVP-----DTLHRCCRNYYRRQVAPPPILIKV---FLFQLIRSI 142
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPE 491
LH L S V H ++K N+L+ + KL +FG L + + R
Sbjct: 143 GCLH--LPSVNVCHRDIKPHNVLVNEADGTL--KLCDFGSAKKLSPSEPNVAYICSRYYR 198
Query: 492 FPE----GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMV 541
PE + T D++ G I E++ G G + ++G L + VR++
Sbjct: 199 APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG----DNSAGQLHEIVRVL 248
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G ++ ++G AVK+V+ + +E V L + +IV Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGL-------SSPRIVPLYG 117
Query: 384 SKEEKL---IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ E I E L GSL L+ + +G +P L + Q +GL +LH +
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQ---MGCLPE--DRALYYLGQALEGLEYLH----T 168
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---------RSPE 491
++ H ++K+ N+L+ +D RA L +FG L ++L G +PE
Sbjct: 169 RRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
GK K D++ ++L ++ G P
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 322 AEVLGKGKVGSTYKATL--ESGAVV--AVKRVKN--MNALSKKEFVQQMQLLGKLKHENL 375
+LGKG+ GS +A L E G+ V AVK +K + + +EF+++ + + H ++
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87
Query: 376 AKIVSFYYSKEEK------LIIYEFLPNGSLFDLLHESRGVGRIP--LAWTTRLSIIKQT 427
AK+V K ++I F+ +G L L SR +G P L T + +
Sbjct: 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFNLPLQTLVRFMVDI 146
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRE-----------NDIYRAKLTNFGFLPLLP 476
A G+ +L S H +L + N ++ + IY G LP
Sbjct: 147 ACGMEYLS----SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 477 SR-KASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNG 523
+ A E+LA T +DV+ FG+ + E++T G+ P G
Sbjct: 203 VKWLALESLA---------DNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 322 AEVLGKGKVGSTYKA-TLESGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+GKG + E+G AVK + + LS ++ ++ + LKH ++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSL-FDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+++ Y S +++EF+ L F++ V R + ++ + +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEI------VKRADAGFVYSEAVASHYMRQILEA 142
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SP 490
+ H + + H ++K N+L+ + + KL +FG L +G +P
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
E + + DV+ G+IL +++G +P G+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 305 FDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNAL--SKKEFV 361
FD T V D +++ E +G G G A +G VA+K++ N + + K +
Sbjct: 47 FDVTFDVGDEYEII----ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL 102
Query: 362 QQMQLLGKLKHENLAKIVSFY-----YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLA 416
+++++L KH+N+ I Y + + + + L L ++H S+ PL
Sbjct: 103 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PLT 157
Query: 417 WTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP 476
+ Q +GL ++H S +V H +LK SN+L+ N+ K+ +FG L
Sbjct: 158 LEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLC 210
Query: 477 SRKASENLAIG--------RSPEFPEG-KRLTHKADVYCFGIILLEVITGR--IPGN 522
+ A + R+PE T D++ G I E++ R PG
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 26/240 (10%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNA-----LSKKEFVQQMQLLGKLKHENLAKI 378
+G G G+ YKA SG VA+K V+ N +S V ++ L +H N+ ++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 379 VSFYYS----KEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+ + +E K+ +++E + + L L ++ G L T +++Q +GL F
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRGLDF 127
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---RSP 490
LH ++ + H +LK NIL+ + KL +FG + + A + + R+P
Sbjct: 128 LH----ANCIVHRDLKPENILVTSGGTV---KLADFGLARIYSYQMALFPVVVTLWYRAP 180
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDI 550
E D++ G I E+ R P + G + D + + ++DW D+
Sbjct: 181 EVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 32/209 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G+G G ++ ++G AVK+V+ + +E V L + +IV Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFRVEELVACAGL-------SSPRIVPLYG 133
Query: 384 SKEEKL---IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ E I E L GSL L+ + +G +P L + Q +GL +LH +
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQ---MGCLPE--DRALYYLGQALEGLEYLH----T 184
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---------RSPE 491
++ H ++K+ N+L+ +D RA L +FG L ++L G +PE
Sbjct: 185 RRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
GK K D++ ++L ++ G P
Sbjct: 243 VVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG+G G ++ ++G AVK+V+ + +E + L +IV Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGL-------TSPRIVPLYG 133
Query: 384 SKEEKL---IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ E I E L GSL L+ E G +P L + Q +GL +LH S
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPE--DRALYYLGQALEGLEYLH----S 184
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---------RSPE 491
++ H ++K+ N+L+ +D A L +FG L ++L G +PE
Sbjct: 185 RRILHGDVKADNVLL--SSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPE 242
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
G+ K DV+ ++L ++ G P
Sbjct: 243 VVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 32/215 (14%)
Query: 324 VLGKGKVGSTYKA-TLESGAVVAVK-----RVKNMNALSKKEFVQ-QMQLLGKLK----H 372
+LGKG G+ + L VA+K RV + LS ++ LL K+ H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 373 ENLAKIVSFYYSKEEKLIIYEF-LPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
+ +++ ++ ++E +++ E LP LFD + E +G P Q +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP-----SRCFFGQVVAAI 152
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYR--AKLTNFGFLPLLPSRKAS--ENLAIG 487
Q HS V H ++K NILI D+ R AKL +FG LL + + +
Sbjct: 153 ----QHCHSRGVVHRDIKDENILI----DLRRGCAKLIDFGSGALLHDEPYTDFDGTRVY 204
Query: 488 RSPEFPEGKRLTHK--ADVYCFGIILLEVITGRIP 520
PE+ + H A V+ GI+L +++ G IP
Sbjct: 205 SPPEW-ISRHQYHALPATVWSLGILLYDMVCGDIP 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 47/226 (20%)
Query: 324 VLGKGKVGSTYKA--TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE-------- 373
VLG+G G KA L+S A+K++++ + ++ LL L H+
Sbjct: 13 VLGQGAFGQVVKARNALDS-RYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 374 -----NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
N K ++ K I E+ NG+L+DL+H + W + +Q
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQIL 126
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF----------LPL---- 474
+ L++ +HS + H +LK NI I ++ K+ +FG L L
Sbjct: 127 EALSY----IHSQGIIHRDLKPMNIFIDESRNV---KIGDFGLAKNVHRSLDILKLDSQN 179
Query: 475 LPSRKASENLAIGR----SPEFPEGK-RLTHKADVYCFGIILLEVI 515
LP + AIG + E +G K D+Y GII E+I
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 35/237 (14%)
Query: 305 FDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATLE-SGAVVAVKRVKNMNAL--SKKEFV 361
FD T V D +++ E +G G G A +G VA+K++ N + + K +
Sbjct: 46 FDVTFDVGDEYEII----ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL 101
Query: 362 QQMQLLGKLKHENLAKIVSFY-----YSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLA 416
+++++L KH+N+ I Y + + + + L L ++H S+ PL
Sbjct: 102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-----PLT 156
Query: 417 WTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP 476
+ Q +GL ++H S +V H +LK SN+L+ N+ K+ +FG L
Sbjct: 157 LEHVRYFLYQLLRGLKYMH----SAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLC 209
Query: 477 SRKASENLAIG--------RSPEFPEG-KRLTHKADVYCFGIILLEVITGR--IPGN 522
+ A + R+PE T D++ G I E++ R PG
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 47/286 (16%)
Query: 325 LGKGKVGSTYKATLESG-AVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
L + G +K + VV V +V++ + ++F ++ L H N+ ++
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 384 S--KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
S +I + P GSL+++LHE G + + + + A+G AFLH TL
Sbjct: 78 SPPAPHPTLITHWXPYGSLYNVLHE--GTNFV-VDQSQAVKFALDXARGXAFLH-TLEP- 132
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL----AIGRSPEFPEGKR 497
+P L S ++ I E+ R + F P R + A+ + PE + R
Sbjct: 133 LIPRHALNSRSVXI-DEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNR 189
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILA 557
+ AD + F ++L E++T +P DLS+ ++
Sbjct: 190 RS--ADXWSFAVLLWELVTREVP----------FADLSN--------------XEIGXKV 223
Query: 558 AREGQNEML------RLTELALECTDIAPEKRPKMSEVLRRIEEIQ 597
A EG + +++L C + P KRPK ++ +E+ Q
Sbjct: 224 ALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 29/243 (11%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNA--------LSKKEFVQQMQLLGKLKHENL 375
+G G G+ YKA SG VA+K V+ N +S V ++ L +H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 376 AKIVSFYYS----KEEKL-IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+++ + +E K+ +++E + + L L ++ G L T +++Q +G
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPG---LPAETIKDLMRQFLRG 132
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--- 487
L FLH ++ + H +LK NIL+ + KL +FG + + A + +
Sbjct: 133 LDFLH----ANCIVHRDLKPENILVTSGGTV---KLADFGLARIYSYQMALTPVVVTLWY 185
Query: 488 RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWS 547
R+PE D++ G I E+ R P + G + D + + ++DW
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244
Query: 548 TDI 550
D+
Sbjct: 245 RDV 247
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG+G G ++ ++G AVK+V+ + +E + L +IV Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGL-------TSPRIVPLYG 152
Query: 384 SKEEKL---IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ E I E L GSL L+ E G +P L + Q +GL +LH S
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQ---GCLPE--DRALYYLGQALEGLEYLH----S 203
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG---------RSPE 491
++ H ++K+ N+L+ +D A L +FG L ++L G +PE
Sbjct: 204 RRILHGDVKADNVLL--SSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPE 261
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
G+ K DV+ ++L ++ G P
Sbjct: 262 VVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 35/268 (13%)
Query: 263 KVHEKEKSNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRASA 322
K + K E G + ++P + E P ++ F KT+ ++ A+A
Sbjct: 3 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQ---FGKTLGAGAFGKVVEATA 59
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHENLAKIVS 380
G GK + K VAVK +K+ +KE + +++++ L +HEN+ ++
Sbjct: 60 --FGLGKEDAVLK--------VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 109
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHE------SRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
L+I E+ G L + L + GR PL L Q A+G+AFL
Sbjct: 110 ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVAQGMAFL 168
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-----KASENLAIG-R 488
S H ++ + N+L+ + + AK+ +FG + + K + L +
Sbjct: 169 A----SKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 221
Query: 489 SPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE T ++DV+ +GI+L E+ +
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 28/215 (13%)
Query: 322 AEVLGKGKVGSTYKATL----ESGAV--VAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT + AV VAVK +K+ +KE + +++++ L +HE
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHE------SRGVGRIPLAWTTRLSIIKQT 427
N+ ++ L+I E+ G L + L + GR PL L Q
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQV 169
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-----KASE 482
A+G+AFL S H ++ + N+L+ + + AK+ +FG + + K +
Sbjct: 170 AQGMAFLA----SKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 483 NLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT 516
L + +PE T ++DV+ +GI+L E+ +
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 50/300 (16%)
Query: 318 LRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAK 377
L S ++LG G G+ G VAVKR+ L + M++ + ++
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPN 88
Query: 378 IVSFYYSKEEKLIIYEFLP--NGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLA 432
++ +Y S+ +Y L N +L DL+ ES+ V L +S+++Q A G+A
Sbjct: 89 VIRYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDI----------YRAKLTNFGFLPLLPSRKASE 482
LH S K+ H +LK NIL+ + R +++FG L S +
Sbjct: 148 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 483 NLAIG--------RSPEFPE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETS 531
+ R+PE E +RLT D++ G + +++ P ++ S
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS----KGKHPFGDKYS 259
Query: 532 GDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLR 591
+ S+ +R + D + D ++A T+L + D P KRP +VLR
Sbjct: 260 RE-SNIIRGIFSLDEMKCLHDRSLIAE---------ATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 124/300 (41%), Gaps = 50/300 (16%)
Query: 318 LRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAK 377
L S ++LG G G+ G VAVKR+ L + M++ + ++
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPN 88
Query: 378 IVSFYYSKEEKLIIYEFLP--NGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLA 432
++ +Y S+ +Y L N +L DL+ ES+ V L +S+++Q A G+A
Sbjct: 89 VIRYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDI----------YRAKLTNFGFLPLLPSRKASE 482
LH S K+ H +LK NIL+ + R +++FG L S +
Sbjct: 148 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 483 NLAIG--------RSPEFPE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETS 531
+ R+PE E +RLT D++ G + +++ P ++ S
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS----KGKHPFGDKYS 259
Query: 532 GDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLR 591
+ S+ +R + D + D ++A T+L + D P KRP +VLR
Sbjct: 260 RE-SNIIRGIFSLDEMKCLHDRSLIAE---------ATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 190 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 243
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 244 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 204 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 257
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 258 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 313
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 106/263 (40%), Gaps = 41/263 (15%)
Query: 322 AEVLGKGKVGSTYKATL--ESGAV--VAVKRVKNMNALSKK--EFVQQMQLLGKLKHENL 375
++LG+G+ GS + L E G VAVK +K N+ ++ EF+ + + H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 376 AKIVSFYYSKEEK-----LIIYEFLPNGSLFDLLHESR---GVGRIPLAWTTRLSIIKQT 427
+++ + ++I F+ G L L SR G IPL T L +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDI 156
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG 487
A G+ +L + H +L + N ++ D + +FG + S I
Sbjct: 157 ALGMEYLS----NRNFLHRDLAARNCML---RDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
Query: 488 RSP------EFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNN-----------E 529
+ P E + T K+DV+ FG+ + E+ T G P G + +
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLK 269
Query: 530 TSGDLSDWVRMVVDNDWSTDILD 552
D D + ++ + W TD LD
Sbjct: 270 QPEDCLDELYEIMYSCWRTDPLD 292
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 18/205 (8%)
Query: 322 AEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
AE LG+G+ G ++ S + + + + +++ +L +H N+ +
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHES 69
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
+ S EE ++I+EF+ +F+ ++ S L +S + Q + L F LHSH
Sbjct: 70 FESMEELVMIFEFISGLDIFERINTS----AFELNEREIVSYVHQVCEALQF----LHSH 121
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAI------GRSPEFPEG 495
+ H +++ NI I++ K+ FG L K +N + +PE +
Sbjct: 122 NIGHFDIRPENI-IYQTRRSSTIKIIEFGQARQL---KPGDNFRLLFTAPEYYAPEVHQH 177
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
++ D++ G ++ +++G P
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF----VQQMQLLGKLKHENLAKIV 379
+G+G G +KA ++G VA+K+V N K+ F ++++++L LKHEN+ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLI 83
Query: 380 SFYYSKEE-----KLIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+K K IY +FD H+ G+ L T LS IK+ + L
Sbjct: 84 EICRTKASPYNRCKASIY------LVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN 136
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-------PSRKASENLAI 486
+H +K+ H ++K++N+LI R+ + KL +FG P+R + + +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 487 G-RSPEFPEGKR-LTHKADVYCFGIILLEVIT 516
R PE G+R D++ G I+ E+ T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR--LSIIKQTAKGLAFLHQT 437
+ ++ K LII E + G LF + E R A+T R I++ + FLH
Sbjct: 93 NMHHGKRCLLIIMECMEGGELFSRIQE-----RGDQAFTEREAAEIMRDIGTAIQFLH-- 145
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN-------LAIGRSP 490
SH + H ++K N+L + KLT+FGF +++ ++N +P
Sbjct: 146 --SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF-----AKETTQNALQTPCYTPYYVAP 198
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSG 532
E ++ D++ G+I+ ++ G P + G + G
Sbjct: 199 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 125/305 (40%), Gaps = 56/305 (18%)
Query: 318 LRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAK 377
L S ++LG G G+ G VAVKR+ L + M++ + ++
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM-----LIDFCDIALMEIKLLTESDDHPN 70
Query: 378 IVSFYYSKEEKLIIYEFLP--NGSLFDLLHESRGVGRIPLAWTTR---LSIIKQTAKGLA 432
++ +Y S+ +Y L N +L DL+ ES+ V L +S+++Q A G+A
Sbjct: 71 VIRYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDI----------YRAKLTNFGFLPLLPSRKASE 482
LH S K+ H +LK NIL+ + R +++FG L S +
Sbjct: 130 HLH----SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 483 NLAIG--------RSPEFPE-------GKRLTHKADVYCFGIILLEVIT-GRIPGNGSPG 526
+ R+PE E +RLT D++ G + +++ G+ P G
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKY 244
Query: 527 NNETSGDLSDWVRMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKM 586
+ E S+ +R + D + D ++A T+L + D P KRP
Sbjct: 245 SRE-----SNIIRGIFSLDEMKCLHDRSLIA---------EATDLISQMIDHDPLKRPTA 290
Query: 587 SEVLR 591
+VLR
Sbjct: 291 MKVLR 295
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 71 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 124
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 125 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 180
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 64 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 117
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 118 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 173
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 118
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 119 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 118
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 119 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 363 QMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS 422
++++L KL H + KI +F+ E+ I+ E + G LFD + VG L T
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKL 118
Query: 423 IIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE 482
Q + +LH+ + + H +LK N+L+ + + K+T+FG +L
Sbjct: 119 YFYQMLLAVQYLHE----NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 483 NLAIGRSPEFPE-----GKRLTHKA-DVYCFGIILLEVITGRIP 520
L + PE G ++A D + G+IL ++G P
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR--LSIIKQTAKGLAFLHQT 437
+ ++ K LII E + G LF + E R A+T R I++ + FLH
Sbjct: 74 NMHHGKRCLLIIMECMEGGELFSRIQE-----RGDQAFTEREAAEIMRDIGTAIQFLH-- 126
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASEN-------LAIGRSP 490
SH + H ++K N+L + KLT+FGF +++ ++N +P
Sbjct: 127 --SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF-----AKETTQNALQTPCYTPYYVAP 179
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSG 532
E ++ D++ G+I+ ++ G P + G + G
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
LG+G G K + SG ++AVKR++ +N+ +K + + + ++ + V+FY
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI--SMRTVDCPFTVTFY 72
Query: 383 YS--KEEKLIIYEFLPNGSLFDLLHESRGVGR-IPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ +E + I L + SL + G+ IP ++++ K L LH L
Sbjct: 73 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLHSKL- 129
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPE----- 494
V H ++K SN+LI N + + K+ +FG L A + A + PE
Sbjct: 130 --SVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184
Query: 495 --GKRLTHKADVYCFGIILLEVITGRIPGN--GSP 525
K + K+D++ GI ++E+ R P + G+P
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 314 LDDLLRASAEVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLK- 371
+D+ + +VLG+G L + AVK ++ + +++++L + +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 372 HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGL 431
H N+ +++ F+ ++ +++E + GS+ +H+ R + + +++ A L
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASAL 124
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP---------------LLP 476
F LH+ + H +LK NIL N + K+ +F LL
Sbjct: 125 DF----LHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 477 SRKASENLAIGRSPEFPEGKRLTHK-ADVYCFGIILLEVITGRIPGNGSPGNN 528
++E +A F E + K D++ G+IL +++G P G G++
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD 233
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 324 VLGKGKVGSTYKATLE-SGAVVAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLAKIVSF 381
+LG+G G AT + +G +VA+K+++ + L ++++++L KHEN+ I +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 382 -----YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ + E II E + LH R + L+ I QT + + +
Sbjct: 78 QRPDSFENFNEVYIIQELMQTD-----LH--RVISTQMLSDDHIQYFIYQTLRAV----K 126
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------- 487
LH V H +LK SN+LI D+ K+ +FG ++ A + G
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDL---KVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 488 -----RSPE-FPEGKRLTHKADVYCFGIILLEVITGR--IPG 521
R+PE + + DV+ G IL E+ R PG
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 93/218 (42%), Gaps = 19/218 (8%)
Query: 314 LDDLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALS-KKEFVQQMQLLGKLKH 372
++DL +G+G G YKA + G +K + +++ LL +LKH
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 373 ENLAKIVSFYYSKEEKLIIYEF-LPNGSLFDLL--HESRGVGRIPLAWTTRL--SIIKQT 427
N+ + + S ++ + F L+ ++ H + + P+ + S++ Q
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFL-----PLLPSRKAS 481
G+ +LH V H +LK +NIL+ E + R K+ + GF PL P
Sbjct: 138 LDGIHYLHANW----VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD 193
Query: 482 ENLAI--GRSPEFPEGKRLTHKA-DVYCFGIILLEVIT 516
+ R+PE G R KA D++ G I E++T
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 324 VLGKGKVGSTYKATLE-SGAVVAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLAKIVSF 381
+LG+G G AT + +G +VA+K+++ + L ++++++L KHEN+ I +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 382 -----YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ + E II E + LH R + L+ I QT + + +
Sbjct: 78 QRPDSFENFNEVYIIQELMQTD-----LH--RVISTQMLSDDHIQYFIYQTLRAV----K 126
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------- 487
LH V H +LK SN+LI D+ K+ +FG ++ A + G
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDL---KVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 488 -----RSPE-FPEGKRLTHKADVYCFGIILLEVITGR--IPG 521
R+PE + + DV+ G IL E+ R PG
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 38/222 (17%)
Query: 324 VLGKGKVGSTYKATLE-SGAVVAVKRVKNMNA-LSKKEFVQQMQLLGKLKHENLAKIVSF 381
+LG+G G AT + +G +VA+K+++ + L ++++++L KHEN+ I +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 382 -----YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ + E II E + LH R + L+ I QT + + +
Sbjct: 78 QRPDSFENFNEVYIIQELMQTD-----LH--RVISTQMLSDDHIQYFIYQTLRAV----K 126
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------- 487
LH V H +LK SN+LI D+ K+ +FG ++ A + G
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDL---KVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 488 -----RSPE-FPEGKRLTHKADVYCFGIILLEVITGR--IPG 521
R+PE + + DV+ G IL E+ R PG
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF----VQQMQLLGKLKHENLAKIV 379
+G+G G +KA ++G VA+K+V N K+ F ++++++L LKHEN+ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLI 83
Query: 380 SFYYSKEE-----KLIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+K K IY +FD H+ G+ L T LS IK+ + L
Sbjct: 84 EICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN 136
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-------PSRKASENLAI 486
+H +K+ H ++K++N+LI R+ + KL +FG P+R + + +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 487 G-RSPEFPEGKR-LTHKADVYCFGIILLEVIT 516
R PE G+R D++ G I+ E+ T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 27 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 85
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 86 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 139
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 140 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 189
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 27 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 85
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 86 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 139
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 140 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 189
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF----VQQMQLLGKLKHENLAKIV 379
+G+G G +KA ++G VA+K+V N K+ F ++++++L LKHEN+ ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLI 82
Query: 380 SFYYSKEE-----KLIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+K K IY +FD H+ G+ L T LS IK+ + L
Sbjct: 83 EICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN 135
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-------PSRKASENLAI 486
+H +K+ H ++K++N+LI R+ + KL +FG P+R + + +
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 487 G-RSPEFPEGKR-LTHKADVYCFGIILLEVIT 516
R PE G+R D++ G I+ E+ T
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE------NL 375
+V+GKG G KA + VA+K V+N ++ +++++L L+ + N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA-AEEIRILEHLRKQDKDNTMNV 161
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + + + +E L + +L++L+ +++ G L ++++ A +
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG-------FSLPLVRKFAHSILQCL 213
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE-NLAIGRSPEFPE 494
LH +++ H +LK NIL+ ++ K+ +FG R + R+PE
Sbjct: 214 DALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 495 GKRLTHKADVYCFGIILLEVITGR--IPG 521
G R D++ G IL E++TG +PG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPG 301
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G +T A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 144
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 145 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 16 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARFY----GAEIVSAL- 123
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 32/212 (15%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF----VQQMQLLGKLKHENLAKIV 379
+G+G G +KA ++G VA+K+V N K+ F ++++++L LKHEN+ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPITALREIKILQLLKHENVVNLI 83
Query: 380 SFYYSKEE-----KLIIYEFLPNGSLFDLL-HESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
+K K IY +FD H+ G+ L T LS IK+ + L
Sbjct: 84 EICRTKASPYNRCKGSIY------LVFDFCEHDLAGLLSNVLVKFT-LSEIKRVMQMLLN 136
Query: 434 LHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-------PSRKASENLAI 486
+H +K+ H ++K++N+LI R+ + KL +FG P+R + + +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 487 G-RSPEFPEGKR-LTHKADVYCFGIILLEVIT 516
R PE G+R D++ G I+ E+ T
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE------NL 375
+V+GKG G KA + VA+K V+N ++ +++++L L+ + N+
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA-AEEIRILEHLRKQDKDNTMNV 161
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + + + +E L + +L++L+ +++ G L ++++ A +
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG-------FSLPLVRKFAHSILQCL 213
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE-NLAIGRSPEFPE 494
LH +++ H +LK NIL+ ++ K+ +FG R + R+PE
Sbjct: 214 DALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 495 GKRLTHKADVYCFGIILLEVITGR--IPG 521
G R D++ G IL E++TG +PG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPG 301
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKE--FVQQMQLLGKLKHENLAKIV 379
+VLG G A + +VA+K + AL KE ++ +L K+KH N+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAK-EALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS--IIKQTAKGLAFLHQT 437
Y S +I + + G LFD + E +G +T R + +I Q + +LH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE-KGF------YTERDASRLIFQVLDAVKYLHDL 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
+ H +LK N+L + ++ + +++FG L + + + A G +PE
Sbjct: 136 ----GIVHRDLKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
K + D + G+I ++ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARFY----GAEIVSAL- 118
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 323 EVLGKGKVGSTYK-ATLESGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENL--AKI 378
E LG G G + ++G VA+K+ + ++ +++ + ++Q++ KL H N+ A+
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 379 VSFYYSK----EEKLIIYEFLPNGSLFDLLHESR---GVGRIPLAWTTRLSIIKQTAKGL 431
V K + L+ E+ G L L++ G+ P+ +++ + L
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSAL 135
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR--- 488
+LH+ +++ H +LK NI++ K+ + G+ L + +G
Sbjct: 136 RYLHE----NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF-VGTLQY 190
Query: 489 -SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+PE E K+ T D + FG + E ITG P
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 37/271 (13%)
Query: 263 KVHEKEKSNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRASA 322
K + K E G + ++P + E P ++ F KT+ ++ A+A
Sbjct: 11 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQ---FGKTLGAGAFGKVVEATA 67
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHENLAKIVS 380
G GK + K VAVK +K+ +KE + +++++ L +HEN+ ++
Sbjct: 68 --FGLGKEDAVLK--------VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAW-------TTR--LSIIKQTAKGL 431
L+I E+ G L + L V A+ +TR L Q A+G+
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGM 177
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-----KASENLAI 486
AFL S H ++ + N+L+ + + AK+ +FG + + K + L +
Sbjct: 178 AFLA----SKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 487 G-RSPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE T ++DV+ +GI+L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 25/213 (11%)
Query: 323 EVLGKGKVGSTYK-ATLESGAVVAVKRVKN-MNALSKKEFVQQMQLLGKLKHENL--AKI 378
E LG G G + ++G VA+K+ + ++ +++ + ++Q++ KL H N+ A+
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 379 VSFYYSK----EEKLIIYEFLPNGSLFDLLHESR---GVGRIPLAWTTRLSIIKQTAKGL 431
V K + L+ E+ G L L++ G+ P+ +++ + L
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-----TLLSDISSAL 134
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR--- 488
+LH+ +++ H +LK NI++ K+ + G+ L + +G
Sbjct: 135 RYLHE----NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF-VGTLQY 189
Query: 489 -SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+PE E K+ T D + FG + E ITG P
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 25 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 83
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 84 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 137
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 138 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 187
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 37/271 (13%)
Query: 263 KVHEKEKSNEGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRASA 322
K + K E G + ++P + E P ++ F KT+ ++ A+A
Sbjct: 11 KYQVRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQ---FGKTLGAGAFGKVVEATA 67
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHENLAKIVS 380
G GK + K VAVK +K+ +KE + +++++ L +HEN+ ++
Sbjct: 68 --FGLGKEDAVLK--------VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG 117
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAW-------TTR--LSIIKQTAKGL 431
L+I E+ G L + L V A+ +TR L Q A+G+
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM 177
Query: 432 AFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-----KASENLAI 486
AFL S H ++ + N+L+ + + AK+ +FG + + K + L +
Sbjct: 178 AFLA----SKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 487 G-RSPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE T ++DV+ +GI+L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 147 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIXKDPDXVRKG 199
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 260 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 298
Query: 599 MIEEN 603
+++ N
Sbjct: 299 LLQAN 303
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 147 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIXKDPDXVRKG 199
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 260 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 298
Query: 599 MIEEN 603
+++ N
Sbjct: 299 LLQAN 303
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 11 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 69
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 70 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 123
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 124 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 173
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 75
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 76 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 129
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 130 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 179
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 65
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 66 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 119
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 120 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 169
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 19/229 (8%)
Query: 324 VLGKGKVGSTYKATLESGAVV--AVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G+G G K ++ G + A K++ F Q+++++ L H N+ ++
Sbjct: 16 TIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
+ + ++ E G LF+ R V + + I+K +A+ H+
Sbjct: 75 FEDNTDIYLVMELCTGGELFE-----RVVHKRVFRESDAARIMKDVLSAVAYCHKL---- 125
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGKR 497
V H +LK N L ++ KL +FG K +G SP+ EG
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGTPYYVSPQVLEG-L 183
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDW 546
+ D + G+++ ++ G P +P + E + + + DW
Sbjct: 184 YGPECDEWSAGVMMYVLLCG-YPPFSAPTDXEVMLKIREGTFTFPEKDW 231
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVK-NMNALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
LG+G G K + SG ++AVKR++ +N+ +K + M L ++ + V+FY
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLL--MDLDISMRTVDCPFTVTFY 116
Query: 383 YS--KEEKLIIYEFLPNGSLFDLLHESRGVGR-IPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ +E + I L + SL + G+ IP ++++ K L LH L
Sbjct: 117 GALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLHSKL- 173
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPE----- 494
V H ++K SN+LI N + + K+ +FG L A A + PE
Sbjct: 174 --SVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPE 228
Query: 495 --GKRLTHKADVYCFGIILLEVITGRIPGN--GSP 525
K + K+D++ GI ++E+ R P + G+P
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 263
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 30/233 (12%)
Query: 295 DPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVGSTYKATL---ESGAVVAVKRVKN 351
DPE + + F K D+LL A E LG G GS + + VA+K +K
Sbjct: 321 DPEELKDKKLFLKR------DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ 373
Query: 352 -MNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGV 410
+E +++ Q++ +L + + +++ + E +++ E G L L R
Sbjct: 374 GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE- 431
Query: 411 GRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFG 470
IP++ L + Q + G+ +L + H+ NL + N+L+ + AK+++FG
Sbjct: 432 -EIPVSNVAEL--LHQVSMGMKYLEEKNFVHR----NLAARNVLLVNR---HYAKISDFG 481
Query: 471 FLPLL-------PSRKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT 516
L +R A + +PE ++ + ++DV+ +G+ + E ++
Sbjct: 482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 324 VLGKGKVGSTYKA--TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE-------- 373
VLG+G G KA L+S A+K++++ + ++ LL L H+
Sbjct: 13 VLGQGAFGQVVKARNALDS-RYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 374 -----NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
N K ++ K I E+ N +L+DL+H + W + +Q
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQIL 126
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF----------LPL---- 474
+ L++ +HS + H +LK NI I ++ K+ +FG L L
Sbjct: 127 EALSY----IHSQGIIHRDLKPMNIFIDESRNV---KIGDFGLAKNVHRSLDILKLDSQN 179
Query: 475 LPSRKASENL--AIGR----SPEFPEGK-RLTHKADVYCFGIILLEVI 515
LP +S+NL AIG + E +G K D+Y GII E+I
Sbjct: 180 LPG--SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 39/264 (14%)
Query: 272 EGQAGEGSAHLSEKKMPDSWSMEDPERRVELEFFDKTIPVFDLDDLLRASAEVLGKGKVG 331
E G + ++P + E P ++ F KT+ ++ A+A G GK
Sbjct: 20 ESYEGNSYTFIDPTQLPYNEKWEFPRNNLQ---FGKTLGAGAFGKVVEATA--FGLGKED 74
Query: 332 STYKATLESGAVVAVKRVKNMNALSKKE-FVQQMQLLGKL-KHENLAKIVSFYYSKEEKL 389
+ K VAVK +K+ +KE + +++++ L +HEN+ ++ L
Sbjct: 75 AVLK--------VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 390 IIYEFLPNGSLFDLLHESRGVG-----------RIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+I E+ G L + L R G L+ L Q A+G+AF L
Sbjct: 127 VITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAF----L 182
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSR-----KASENLAIG-RSPEF 492
S H ++ + N+L+ + + AK+ +FG + + K + L + +PE
Sbjct: 183 ASKNCIHRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES 239
Query: 493 PEGKRLTHKADVYCFGIILLEVIT 516
T ++DV+ +GI+L E+ +
Sbjct: 240 IFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 156 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIXKDPDXVRKG 208
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 269 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 11 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 69
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 70 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 123
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 124 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENXYKAQTH 173
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 147 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 199
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 260 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 298
Query: 599 MIEEN 603
+++ N
Sbjct: 299 LLQAN 303
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 21/207 (10%)
Query: 323 EVLGKGKVGSTYKATLESGAVV-AVKRVKNMNALSKKEFVQQMQ----LLGKLKHENLAK 377
+V+GKG G A ++ V AVK ++ L KKE M LL +KH L
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ + + ++ + +++ G LF L R L R + A L +
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCF----LEPRARF-YAAEIASALGY---- 154
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
LHS + + +LK NIL+ + I LT+FG ++ + G +PE
Sbjct: 155 LHSLNIVYRDLKPENILLDSQGHIV---LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
+ D +C G +L E++ G P
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 147 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 199
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 259
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 260 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 298
Query: 599 MIEEN 603
+++ N
Sbjct: 299 LLQAN 303
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 5 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 63
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 64 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 117
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 118 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 167
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 19/229 (8%)
Query: 324 VLGKGKVGSTYKATLESGAVV--AVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G+G G K ++ G + A K++ F Q+++++ L H N+ ++
Sbjct: 33 TIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSH 441
+ + ++ E G LF+ R V + + I+K +A+ H+
Sbjct: 92 FEDNTDIYLVMELCTGGELFE-----RVVHKRVFRESDAARIMKDVLSAVAYCHKL---- 142
Query: 442 KVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGKR 497
V H +LK N L ++ KL +FG K +G SP+ EG
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT-KVGTPYYVSPQVLEG-L 200
Query: 498 LTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDW 546
+ D + G+++ ++ G P +P + E + + + DW
Sbjct: 201 YGPECDEWSAGVMMYVLLCG-YPPFSAPTDXEVMLKIREGTFTFPEKDW 248
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +A
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMAGFVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +A
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMAGFVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 156 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIXKDPDXVRKG 208
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 269 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 156 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 208
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 269 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARFY----GAEIVSAL- 118
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 158 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 210
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 270
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 271 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 22/222 (9%)
Query: 314 LDDLLRASAEVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGK 369
L D +E LG+G Y K T + A+ +K+ + KK ++ +L +
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLR 104
Query: 370 LKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
L H N+ K+ + + E ++ E + G LFD + E A +KQ +
Sbjct: 105 LSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA-----DAVKQILE 159
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR- 488
+A+LH+ + + H +LK N+L K+ +FG ++ + + +
Sbjct: 160 AVAYLHE----NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPG 215
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNN 528
+PE G + D++ GII ++ G P G+
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ 257
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARF----YGAEIVSAL- 118
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKXFCGTPEYLAPE 175
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 123/302 (40%), Gaps = 51/302 (16%)
Query: 325 LGKGKVGSTYKA------TLESGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHE-NLA 376
LG+G G +A + VAVK +K S+ + + ++++L + H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 377 KIVSFYYSKEEKL-IIYEFLPNGSLFDLLHESRG-------VGRIPLAWTTRLSIIKQTA 428
++ L +I EF G+L L R + + L + Q A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKASEN 483
KG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 155 KGMEFLA----SRKXIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKGDAR 207
Query: 484 LAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWVRMV 541
L + +PE + T ++DV+ FG++L E+ + G P G + E L + RM
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 267
Query: 542 VDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQPMIE 601
D++T + + L+C P +RP SE+ +E + +++
Sbjct: 268 AP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGNLLQ 306
Query: 602 EN 603
N
Sbjct: 307 AN 308
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + + L G VAVK++ N K +++ LL + H+N+ +++ +
Sbjct: 34 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT 91
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ ++ E + + +L ++H R+ L IK
Sbjct: 92 PQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLYQMLCGIKH----------- 139
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RS 489
LHS + H +LK SNI++ + + K+ +FG +R AS N + R+
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTL---KILDFGL-----ARTASTNFMMTPYVVTRYYRA 191
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
PE G D++ G I+ E++ G + G+
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARF----YGAEIVSAL- 118
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 193 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 245
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 305
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 306 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 199 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 251
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 311
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 312 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 350
Query: 599 MIEEN 603
+++ N
Sbjct: 351 LLQAN 355
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 17/214 (7%)
Query: 322 AEVLGKGKVGSTYKA-TLESGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+GKG + E+G AVK + + LS ++ ++ + LKH ++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSL-FDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+++ Y S +++EF+ L F+++ R + ++Q + L +
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIV--KRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SP 490
H + + H ++K +L+ + + KL FG L +G +P
Sbjct: 147 HD----NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
E + + DV+ G+IL +++G +P G+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 206 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 258
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 318
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 319 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 86 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +A
Sbjct: 136 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMAGFVATRW 183
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 201 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 253
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 313
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 314 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 352
Query: 599 MIEEN 603
+++ N
Sbjct: 353 LLQAN 357
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 208 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDYVRKG 260
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 320
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 321 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE------NL 375
+V+GKG G KA + VA+K V+N ++ +++++L L+ + N+
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA-AEEIRILEHLRKQDKDNTMNV 161
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
++ + + + +E L + +L++L+ +++ G L ++++ A +
Sbjct: 162 IHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQG-------FSLPLVRKFAHSILQCL 213
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE-NLAIGRSPEFPE 494
LH +++ H +LK NIL+ ++ K+ +FG R R+PE
Sbjct: 214 DALHKNRIIHCDLKPENILL-KQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVIL 272
Query: 495 GKRLTHKADVYCFGIILLEVITGR--IPG 521
G R D++ G IL E++TG +PG
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPG 301
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 156 QVAKGMEFLA----SRKCIHRDLAARNILLSEKNVV---KICDFGLARDIYKDPDXVRKG 208
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 269 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKE--FVQQMQLLGKLKHENLAKIV 379
+VLG G A + +VA+K + AL KE ++ +L K+KH N+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAK-EALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS--IIKQTAKGLAFLHQT 437
Y S +I + + G LFD + E +G +T R + +I Q + +LH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE-KGF------YTERDASRLIFQVLDAVKYLHDL 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
+ H +LK N+L + ++ + +++FG L + + + A G +PE
Sbjct: 136 ----GIVHRDLKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
K + D + G+I ++ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARF----YGAEIVSAL- 118
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKTFCGTPEYLAPE 175
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENL 375
++LGKG G KAT G A+K ++ ++K E V + ++L +H L
Sbjct: 14 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R A+ ++ L
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGELF--FHLSRE--RVFTEERARF----YGAEIVSAL- 121
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
+ LHS V + ++K N+++ ++ I K+T+FG S A+ G +PE
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHI---KITDFGLCKEGISDGATMKTFCGTPEYLAPE 178
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 51/228 (22%)
Query: 324 VLGKGKVGSTYKA--TLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHE-------- 373
VLG+G G KA L+S A+K++++ + ++ LL L H+
Sbjct: 13 VLGQGAFGQVVKARNALDS-RYYAIKKIRHTEE-KLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 374 -----NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTA 428
N K + K I E+ N +L+DL+H + W + +Q
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQIL 126
Query: 429 KGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF----------LPL---- 474
+ L++ +HS + H NLK NI I ++ K+ +FG L L
Sbjct: 127 EALSY----IHSQGIIHRNLKPXNIFIDESRNV---KIGDFGLAKNVHRSLDILKLDSQN 179
Query: 475 LPSRKASENL--AIGR----SPEFPEGK-RLTHKADVYCFGIILLEVI 515
LP +S+NL AIG + E +G K D Y GII E I
Sbjct: 180 LPG--SSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKE--FVQQMQLLGKLKHENLAKIV 379
+VLG G A + +VA+K + AL KE ++ +L K+KH N+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAK-KALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS--IIKQTAKGLAFLHQT 437
Y S +I + + G LFD + E +G +T R + +I Q + +LH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE-KGF------YTERDASRLIFQVLDAVKYLHDL 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
+ H +LK N+L + ++ + +++FG L + + + A G +PE
Sbjct: 136 ----GIVHRDLKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
K + D + G+I ++ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 323 EVLGKGKVGSTYKA-TLESGAVVAVKRVKNMNALSKKE--FVQQMQLLGKLKHENLAKIV 379
+VLG G A + +VA+K + AL KE ++ +L K+KH N+ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAK-EALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS--IIKQTAKGLAFLHQT 437
Y S +I + + G LFD + E +G +T R + +I Q + +LH
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE-KGF------YTERDASRLIFQVLDAVKYLHDL 135
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
+ H +LK N+L + ++ + +++FG L + + + A G +PE
Sbjct: 136 ----GIVHRDLKPENLLYYSLDEDSKIMISDFG-LSKMEDPGSVLSTACGTPGYVAPEVL 190
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
K + D + G+I ++ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + + L G VAVK++ N K +++ LL + H+N+ +++ +
Sbjct: 36 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFT 93
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ ++ E + + +L ++H R+ L IK
Sbjct: 94 PQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSYLLYQMLCGIKH----------- 141
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R TNF P + +R R+P
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYY-------RAP 194
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
E G D++ G I+ E++ G + G+
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELVKGCVIFQGT 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 359 EFVQQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSL--FD---LLHESRGVGRI 413
+F ++Q++ +K+E + +E IIYE++ N S+ FD + + I
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 414 PLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP 473
P+ IIK +++H + + H ++K SNIL+ + R KL++FG
Sbjct: 149 PIQVIK--CIIKSVLNSFSYIH---NEKNICHRDVKPSNILMDKNG---RVKLSDFGESE 200
Query: 474 LLPSR--KASENLAIGRSPEF--PEGKRLTHKADVYCFGIILLEVITGRIP 520
+ + K S PEF E K D++ GI L + +P
Sbjct: 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 156 QVAKGMEFLA----SRKXIHRDLAARNILLSEKNVV---KICDFGLARDIXKDPDXVRKG 208
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 268
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRI 593
RM D++T + + L+C P +RP SE++ +
Sbjct: 269 RMRA-PDYTTP-----------------EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKR--------VKNMNALSKKEFVQQMQLLGKLKHE 373
E +G G+ GS +K G + A+KR V NAL + V +LG+ H
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE---VYAHAVLGQ--HS 69
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
++ + S + + LI E+ GSL D + E+ + ++ Q +GL +
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY-FKEAELKDLLLQVGRGLRY 128
Query: 434 LHQTLHSHKVPHANLKSSNILIFR 457
+H S + H ++K SNI I R
Sbjct: 129 IH----SMSLVHMDIKPSNIFISR 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKR--------VKNMNALSKKEFVQQMQLLGKLKHE 373
E +G G+ GS +K G + A+KR V NAL + V +LG+ H
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE---VYAHAVLGQ--HS 69
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
++ + S + + LI E+ GSL D + E+ + ++ Q +GL +
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY-FKEAELKDLLLQVGRGLRY 128
Query: 434 LHQTLHSHKVPHANLKSSNILIFR 457
+H S + H ++K SNI I R
Sbjct: 129 IH----SMSLVHMDIKPSNIFISR 148
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 89/214 (41%), Gaps = 17/214 (7%)
Query: 322 AEVLGKGKVGSTYKA-TLESGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENL 375
EV+GKG + E+G AVK + + LS ++ ++ + LKH ++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSL-FDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFL 434
+++ Y S +++EF+ L F++ V R + ++ + +
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEI------VKRADAGFVYSEAVASHYMRQILEA 144
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SP 490
+ H + + H ++K +L+ + + KL FG L +G +P
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNGS 524
E + + DV+ G+IL +++G +P G+
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 238
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKR--------VKNMNALSKKEFVQQMQLLGKLKHE 373
E +G G+ GS +K G + A+KR V NAL + V +LG+ H
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE---VYAHAVLGQ--HS 71
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
++ + S + + LI E+ GSL D + E+ + ++ Q +GL +
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY-FKEAELKDLLLQVGRGLRY 130
Query: 434 LHQTLHSHKVPHANLKSSNILIFR 457
+H S + H ++K SNI I R
Sbjct: 131 IH----SMSLVHMDIKPSNIFISR 150
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 33/220 (15%)
Query: 325 LGKGKVGSTYKATLESGAVVAVK---RVKNMNALSKKEFVQQMQLLGKLKHENL----AK 377
+GKG+ G + G VAVK + + + E Q + + +HEN+ A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLM----RHENILGFIAA 99
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ S + +I ++ NGSL+D L + L + L + + GL LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 438 LHSHK----VPHANLKSSNILIFRENDIYRAKL-TNFGFLPLLPSRKASENLAIGRSPEF 492
+ S + + H +LKS NIL+ + A L F+ N +G
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 493 P-----EGKRLTH-----KADVYCFGIILLEVITGRIPGN 522
P E H AD+Y FG+IL EV + G
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGG 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 45/220 (20%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG----- 487
++H S + H +LK SN+ + ++++ K+ +FG + +++ G
Sbjct: 140 YIH----SADIIHRDLKPSNLAVNEDSEL---KILDFGLC------RHTDDEMTGYVATR 186
Query: 488 --RSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 19/144 (13%)
Query: 323 EVLGKGKVGSTYKATLE-SGAVVAVKR--------VKNMNALSKKEFVQQMQLLGKLKHE 373
E +G G+ GS +K G + A+KR V NAL + V +LG+ H
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE---VYAHAVLGQ--HS 67
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAF 433
++ + S + + LI E+ GSL D + E+ + ++ Q +GL +
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY-FKEAELKDLLLQVGRGLRY 126
Query: 434 LHQTLHSHKVPHANLKSSNILIFR 457
+H S + H ++K SNI I R
Sbjct: 127 IH----SMSLVHMDIKPSNIFISR 146
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPS-----RKA 480
Q AKG+ FL S K H +L + NIL+ +N + K+ +FG + RK
Sbjct: 152 QVAKGMEFLA----SRKXIHRDLAARNILLSEKNVV---KIXDFGLARDIYKDPDYVRKG 204
Query: 481 SENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETSGDLSDWV 538
L + +PE + T ++DV+ FG++L E+ + G P G + E L +
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT 264
Query: 539 RMVVDNDWSTDILDVEILAAREGQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
RM D++T + + L+C P +RP SE+ +E +
Sbjct: 265 RMRAP-DYTTP-----------------EMYQTMLDCWHGEPSQRPTFSEL---VEHLGN 303
Query: 599 MIEEN 603
+++ N
Sbjct: 304 LLQAN 308
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 23/111 (20%)
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF--------- 471
L I Q A+ + FLH S + H +LK SNI F +D+ K+ +FG
Sbjct: 167 LHIFIQIAEAVEFLH----SKGLMHRDLKPSNIF-FTMDDV--VKVGDFGLVTAMDQDEE 219
Query: 472 -------LPLLPSRKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVI 515
+P + + SPE G +HK D++ G+IL E++
Sbjct: 220 EQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 102 LY-FCFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 151
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 152 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 79 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 128
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 129 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 95 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 145 YIH----SADIIHRDLKPSNLAV---NEDXELKILDFGL-----ARHTDDEMTGYVATRW 192
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 96 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + ++++ K+ +FG +R + +
Sbjct: 146 YIH----SADIIHRDLKPSNLAVNEDSEL---KILDFGL-----ARHTDDEMTGYVATRW 193
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 97 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R ++ +
Sbjct: 147 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTADEMTGYVATRW 194
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 97 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R ++ +
Sbjct: 147 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTADEMTGYVATRW 194
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G T TA+ ++ L +
Sbjct: 74 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFY-----TAEIVSAL-E 123
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 124 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 73 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 122
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 123 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 97 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R ++ +
Sbjct: 147 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTADEMTGYVATRW 194
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 72 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 121
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 122 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 92 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + ++++ K+ +FG +R + +
Sbjct: 142 YIH----SADIIHRDLKPSNLAVNEDSEL---KILDFGL-----ARHTDDEMTGYVATRW 189
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG L + R +G T TA+ ++ L +
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNGCLLKYI---RKIGSFDETCTRFY-----TAEIVSAL-E 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K + +D++ G I+ +++ G P
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 98 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 147
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 148 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G T TA+ ++ L +
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFY-----TAEIVSAL-E 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G T TA+ ++ L +
Sbjct: 75 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFY-----TAEIVSAL-E 124
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 125 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 144
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 145 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIY--EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ S EE +Y L L +++ + L +I Q +GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQK------LTDDHVQFLIYQILRGLKYIH- 142
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------IGRSP 490
S + H +LK SN+ + N+ K+ +FG +R + + R+P
Sbjct: 143 ---SADIIHRDLKPSNLAV---NEDXELKILDFGL-----ARHTDDEMTGYVATRWYRAP 191
Query: 491 EFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
E D++ G I+ E++TGR PG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 144
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 145 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 94 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 143
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 144 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 95 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 144
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 145 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 95 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 145 YIH----SADIIHRDLKPSNLAV---NEDXELKILDFGL-----ARHTDDEMTGYVATRW 192
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 96 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 146 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 193
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 427
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 428 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 481
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 482 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 531
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 100 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 149
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 150 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 97 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 146
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 147 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 100 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 149
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 150 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 197
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 317 LLRASAEVLGKGKVGSTYKATLE------SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL 370
LL + LG G G+ K + + AV +K N AL K E + + ++ +L
Sbjct: 370 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-KDELLAEANVMQQL 428
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ E +++ E G L L ++R V + + ++ Q + G
Sbjct: 429 DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMG 482
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRS- 489
+ +L ++ H+ +L + N+L+ + + AK+++FG L +A EN ++
Sbjct: 483 MKYLEESNFVHR----DLAARNVLLVTQ---HYAKISDFGLSKAL---RADENYYKAQTH 532
Query: 490 ---------PEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSPGNNETS 531
PE + + K+DV+ FG+++ E + G+ P G G+ T+
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 97 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 146
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 147 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 194
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 86 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLK 135
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 136 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 183
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 92 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 142 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 189
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 102 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 152 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 199
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGXVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 41/228 (17%)
Query: 322 AEVLGKGKVGSTYKATL----ESGAV--VAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+ LG G G +AT + AV VAVK +K+ +KE + +++++ L +HE
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLL---------------HESRGV----GRIP 414
N+ ++ L+I E+ G L + L + G+ GR P
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR-P 154
Query: 415 LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPL 474
L L Q A+G+AFL S H ++ + N+L+ + + AK+ +FG
Sbjct: 155 LELRDLLHFSSQVAQGMAFLA----SKNCIHRDVAARNVLL---TNGHVAKIGDFGLARD 207
Query: 475 LPSR-----KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT 516
+ + K + L + +PE T ++DV+ +GI+L E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 92 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 142 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 189
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIY--EFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ S EE +Y L L +++ + L +I Q +GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQK------LTDDHVQFLIYQILRGLKYIH- 142
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------IGRSP 490
S + H +LK SN+ + N+ K+ +FG +R + + R+P
Sbjct: 143 ---SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRWYRAP 191
Query: 491 EFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
E D++ G I+ E++TGR PG
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 102 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 152 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 199
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 102 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 151
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 152 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 199
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 95 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 145 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 192
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 95 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 145 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 192
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 89 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 138
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 139 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 186
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 113 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 163 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMXGYVATRW 210
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 110 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 160 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 207
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 316 DLLRASAEVLGKGKVGSTYKATLESGA----VVAVKRVKNM----NALSKKEFVQQMQLL 367
+LLR VLGKG G ++ +GA + A+K +K NA + +L
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 368 GKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQT 427
++KH + ++ + + + +I E+L G LF L E G+ T + +
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGI----FMEDTACFYLAEI 130
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG 487
+ L LHQ + + +LK NI++ + + KLT+FG + G
Sbjct: 131 SMALGHLHQK----GIIYRDLKPENIMLNHQGHV---KLTDFGLCKESIHDGTVTHXFCG 183
Query: 488 R----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+PE D + G ++ +++TG P G
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 101 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 151 YIH----SADIIHRDLKPSNLAV---NEDXELKILDFGL-----ARHTDDEMTGYVATRW 198
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 24/213 (11%)
Query: 315 DDLLRASAEVLGKGKVGSTYKATL---ESGAVVAVKRVKN-MNALSKKEFVQQMQLLGKL 370
D+LL A E LG G GS + + VA+K +K +E +++ Q++ +L
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
+ + +++ + E +++ E G L L R IP++ L + Q + G
Sbjct: 68 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAEL--LHQVSMG 122
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-------PSRKASEN 483
+ +L + H+ +L + N+L+ + AK+++FG L +R A +
Sbjct: 123 MKYLEEKNFVHR----DLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 484 LAIGRSPEFPEGKRLTHKADVYCFGIILLEVIT 516
+PE ++ + ++DV+ +G+ + E ++
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 323 EVLGKGKVGST-----YKATLESGAVVAVKRVKNMNALSKKEF-------VQQMQLLGKL 370
E+LG+G V S +K T + AV + V + S +E ++++ +L K+
Sbjct: 10 EILGRG-VSSVVRRCIHKPTCKEYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKV 67
Query: 371 K-HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
H N+ ++ Y + ++++ + G LFD L E ++ L+ I++ +
Sbjct: 68 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLE 122
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGR 488
+ LH+ + H +LK NIL+ +D KLT+FGF L P K E
Sbjct: 123 VICALHKL----NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 175
Query: 489 --SPEFPEGKR------LTHKADVYCFGIILLEVITGRIP 520
+PE E + D++ G+I+ ++ G P
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 109 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 159 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 206
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 87 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 137 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 184
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 113 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 162
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 163 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 210
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 110 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 160 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 207
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 109 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 158
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 159 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 206
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 92 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 141
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 142 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 189
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 87 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 136
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 137 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 184
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 101 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 150
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 151 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 198
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 86 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 136 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 183
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G TR TA+ ++ L +
Sbjct: 94 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFD-ETCTRF----YTAEIVSAL-E 143
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 144 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 316 DLLRASAEVLGKGKVGSTYKATLESGA----VVAVKRVKNM----NALSKKEFVQQMQLL 367
+LLR VLGKG G ++ +GA + A+K +K NA + +L
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 368 GKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQT 427
++KH + ++ + + + +I E+L G LF L E G+ T + +
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGI----FMEDTACFYLAEI 130
Query: 428 AKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG 487
+ L LHQ + + +LK NI++ + + KLT+FG + G
Sbjct: 131 SMALGHLHQK----GIIYRDLKPENIMLNHQGHV---KLTDFGLCKESIHDGTVTHTFCG 183
Query: 488 R----SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+PE D + G ++ +++TG P G
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 86 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 135
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 136 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 183
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 322 AEVLGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKEF---VQQMQLLGKLKHENLAK 377
++LG+G + A L + A+K ++ + + + + ++ ++ +L H K
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 378 IVSFYYSKEEKLII-YEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQ 436
+ F + +EKL + NG +LL R +G T TA+ ++ L +
Sbjct: 98 LY-FTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFY-----TAEIVSAL-E 147
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLP--SRKASENLAIGR----SP 490
LH + H +LK NIL+ N+ ++T+FG +L S++A N +G SP
Sbjct: 148 YLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIP 520
E K +D++ G I+ +++ G P
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 96 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 146 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 193
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 323 EVLGKGKVGST-----YKATLESGAVVAVKRVKNMNALSKKEF-------VQQMQLLGKL 370
E+LG+G V S +K T + AV + V + S +E ++++ +L K+
Sbjct: 23 EILGRG-VSSVVRRCIHKPTCKEYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 371 K-HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
H N+ ++ Y + ++++ + G LFD L E ++ L+ I++ +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLE 135
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIGR 488
+ LH+ + H +LK NIL+ +D KLT+FGF L P K E
Sbjct: 136 VICALHKL----NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 188
Query: 489 --SPEFPEGKR------LTHKADVYCFGIILLEVITGRIP 520
+PE E + D++ G+I+ ++ G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 88 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 137
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 138 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 185
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 96 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 145
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 146 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVATRW 193
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 48/234 (20%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLK-HENLAKIVS 380
LGKG G +K+ +G VVAVK++ + N+ + +++ +L +L HEN+ +++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 381 FYYSKEEK--LIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ ++ ++++++ DL R P+ + ++ Q K + +LH
Sbjct: 77 VLRADNDRDVYLVFDYMET----DLHAVIRANILEPVH---KQYVVYQLIKVIKYLH--- 126
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGF-LPLLPSRKASENLAIG---------- 487
S + H ++K SNIL+ E + K+ +FG + R+ + N+ +
Sbjct: 127 -SGGLLHRDMKPSNILLNAECHV---KVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 488 --------------RSPEFPEGK-RLTHKADVYCFGIILLEVITGR--IPGNGS 524
R+PE G + T D++ G IL E++ G+ PG+ +
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 110 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 159
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 160 YIH----SADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMXGXVATRW 207
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 41/218 (18%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFREN-----DIYRAKLTNFGFLPLLPSRKASENLAIG 487
++H S + H +LK SN+ + + D Y A+ T+ + +R
Sbjct: 140 YIH----SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWY------- 188
Query: 488 RSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 324 VLGKGKVGST----YKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G +AT + A +++ + + + + Q+L K+ + +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 380 SFYYSKEEKLIIYEFLPNGSL-FDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
Y +K+ ++ + G L F + H +G+ + + GL + L
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYH----MGQAGFPEARAVFYAAEICCGL----EDL 302
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL--AIG-RSPEFPEG 495
H ++ + +LK NIL+ +D ++++ G +P + + +G +PE +
Sbjct: 303 HRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
+R T D + G +L E+I G+ P
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 356 SKKEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP 414
SK++ +++++L + +H N+ + Y + ++ E + G L D + +
Sbjct: 58 SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSERE 117
Query: 415 LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLP 473
A +I K + LH+ V H +LK SNIL E+ + ++ +FGF
Sbjct: 118 -ASAVLFTITKTV--------EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 474 LLPSRKA-------SENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
L + + N +PE E + D++ G++L ++TG P P
Sbjct: 169 QLRAENGLLMTPCYTANFV---APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225
Query: 527 NN 528
+
Sbjct: 226 DT 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 44/224 (19%)
Query: 323 EVLGKGKVGST-----YKATLESGAVVAVKRVKNMNALSKKEF-------VQQMQLLGKL 370
E+LG+G V S +K T + AV + V + S +E ++++ +L K+
Sbjct: 23 EILGRG-VSSVVRRCIHKPTCKEYAVKIID-VTGGGSFSAEEVQELREATLKEVDILRKV 80
Query: 371 K-HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
H N+ ++ Y + ++++ + G LFD L E ++ L+ I++ +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLE 135
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL------------PS 477
+ LH+ + H +LK NIL+ +D KLT+FGF L PS
Sbjct: 136 VICALHKL----NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS 188
Query: 478 RKASENLAIGRSPEFP-EGKRLTHKADVYCFGIILLEVITGRIP 520
A E + + P GK + D++ G+I+ ++ G P
Sbjct: 189 YLAPEIIECSMNDNHPGYGK----EVDMWSTGVIMYTLLAGSPP 228
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 324 VLGKGKVGST----YKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
VLGKG G +AT + A +++ + + + + Q+L K+ + +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 380 SFYYSKEEKLIIYEFLPNGSL-FDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
Y +K+ ++ + G L F + H +G+ + + GL + L
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYH----MGQAGFPEARAVFYAAEICCGL----EDL 302
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENL--AIG-RSPEFPEG 495
H ++ + +LK NIL+ +D ++++ G +P + + +G +PE +
Sbjct: 303 HRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
+R T D + G +L E+I G+ P
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 47/221 (21%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS + ++SG +AVK++ + + K ++++LL +KHEN+ ++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 382 YYSKEEKLIIYEFLPNGSLFD-----LLHESRGVGRIPLAWTTRLS------IIKQTAKG 430
F P SL + L+ G + +L+ +I Q +G
Sbjct: 119 ------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA----- 485
L + +HS + H +LK SN+ + N+ K+ +FG +R + +
Sbjct: 167 LKY----IHSADIIHRDLKPSNLAV---NEDCELKILDFGL-----ARHTDDEMTGYVAT 214
Query: 486 -IGRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ FG +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILGFGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 358 KEFVQQMQLLGKLKHENLAKIVSFYYSKEEK--LIIYEFLPNGSLFDLLHESRGVGRIPL 415
++ Q++ +L KL H N+ K+V E +++E + G + ++ PL
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK------PL 134
Query: 416 AWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL 475
+ + KG+ + LH K+ H ++K SN+L+ + I K+ +FG
Sbjct: 135 SEDQARFYFQDLIKGIEY----LHYQKIIHRDIKPSNLLVGEDGHI---KIADFGVSNEF 187
Query: 476 PSRKASENLAIGRSPEF--PEGKRLTHKA------DVYCFGIILLEVITGRIP 520
A + +G +P F PE T K DV+ G+ L + G+ P
Sbjct: 188 KGSDALLSNTVG-TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 81/205 (39%), Gaps = 16/205 (7%)
Query: 323 EVLGKGK---VGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E LGKG V K T + K ++A ++ ++ ++ LKH N+ ++
Sbjct: 37 EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 96
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I Q + + +HQ
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIHQILESVNHIHQ--- 148
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
H + H +LK N+L+ + KL +FG + + + G SPE
Sbjct: 149 -HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
D++ G+IL ++ G P
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 325 LGKGKVGSTYKA-TLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSF 381
+G G GS A ++G VAVK++ + + K ++++LL +KHEN+ ++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 382 YY---SKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLS------IIKQTAKGLA 432
+ S EE +Y L+ G + +L+ +I Q +GL
Sbjct: 90 FTPARSLEEFNDVY----------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 139
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------I 486
++H S + H +LK SN+ + N+ K+ ++G +R + +
Sbjct: 140 YIH----SADIIHRDLKPSNLAV---NEDCELKILDYGL-----ARHTDDEMTGYVATRW 187
Query: 487 GRSPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
R+PE D++ G I+ E++TGR PG
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 48/217 (22%)
Query: 382 YYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP-----LAWTTRLSIIKQTAKGLAFLHQ 436
Y + E ++I E+ G +F L +P ++ + +IKQ +G+ +LHQ
Sbjct: 98 YENTSEIILILEYAAGGEIFSLC--------LPELAEMVSENDVIRLIKQILEGVYYLHQ 149
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK---ASENLAIGRSPEF- 492
+ + H +LK NIL+ + K+ +FG SRK A E I +PE+
Sbjct: 150 ----NNIVHLDLKPQNILLSSIYPLGDIKIVDFGM-----SRKIGHACELREIMGTPEYL 200
Query: 493 -PE---GKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWST 548
PE +T D++ GII ++T P G N ET ++S V+ D+S
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE-DNQETYLNISQ-----VNVDYSE 254
Query: 549 DIL-DVEILAAREGQNEMLRLTELALECTDIAPEKRP 584
+ V LA Q+ +++ PEKRP
Sbjct: 255 ETFSSVSQLATDFIQSLLVK-----------NPEKRP 280
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 325 LGKGKVGSTYKATL-ESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
LG G G + A + VA+K++ + S K +++++++ +L H+N+ K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 384 SKEEKL--------------IIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
+L I+ E++ L ++L + PL + Q +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQG------PLLEEHARLFMYQLLR 131
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKASENLAIGR 488
GL + +HS V H +LK +N+ I E+ + K+ +FG ++ P +L+ G
Sbjct: 132 GLKY----IHSANVLHRDLKPANLFINTEDLVL--KIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 489 SPEFPEGKRL-------THKADVYCFGIILLEVITGR 518
++ RL T D++ G I E++TG+
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 38/214 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 38 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 95
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 96 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 143
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F +P + +R R+P
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYY-------RAP 196
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PGN 522
E G D++ G I+ E+I G + PG
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 230
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 97/254 (38%), Gaps = 51/254 (20%)
Query: 324 VLGKGKVGSTYKATL-ESGAVVAVK-----RVKNMNALSKKEFVQQMQLLGKLKHENLAK 377
+G+G G A ++ A+ A+K +++ +N + +++L+ KL H N+A+
Sbjct: 33 AIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLH----ESRGVG---------------------- 411
+ Y ++ ++ E G L D L+ +S G
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 412 -----RIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKL 466
R L + R +I + + LH+ + H ++K N L F N + KL
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL-FSTNKSFEIKL 211
Query: 467 TNFGFLPLLPSRKASENLAI---GRSPEF--PEGKRLTH-----KADVYCFGIILLEVIT 516
+FG E + +P F PE T+ K D + G++L ++
Sbjct: 212 VDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLM 271
Query: 517 GRIPGNGSPGNNET 530
G +P PG N+
Sbjct: 272 GAVP---FPGVNDA 282
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 48/217 (22%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSK 385
G V S Y A L VAVK++ + + + ++++LL LKHEN+ ++
Sbjct: 42 GSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV---- 95
Query: 386 EEKLIIYEFLPNGSLFD-----LLHESRGVGRIPLAWTTRLS------IIKQTAKGLAFL 434
F P S+ D L+ G + + LS ++ Q +GL ++
Sbjct: 96 --------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------IGR 488
H S + H +LK SN+ + ++++ ++ +FG +R+A E + R
Sbjct: 148 H----SAGIIHRDLKPSNVAVNEDSEL---RILDFGL-----ARQADEEMTGYVATRWYR 195
Query: 489 SPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
+PE D++ G I+ E++ G+ PG+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 356 SKKEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP 414
SK++ +++++L + +H N+ + Y + ++ E + G L D + +
Sbjct: 63 SKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSERE 122
Query: 415 LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRA-KLTNFGFLP 473
++ L I +T + LHS V H +LK SNIL E+ ++ +FGF
Sbjct: 123 ASFV--LHTIGKTV-------EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 474 LLPSRKA-------SENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
L + + N +PE + + D++ GI+L ++ G P P
Sbjct: 174 QLRAENGLLMTPCYTANFV---APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 527 NN 528
+
Sbjct: 231 DT 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 25/174 (14%)
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEK--LIIYEFLPNG--SLFDLLHESRGVGRIPLAW 417
+++QLL +L+H+N+ ++V Y++E++ ++ E+ G + D + E R P+
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK----RFPVCQ 110
Query: 418 TTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-- 475
Q GL + LHS + H ++K N+L+ + K++ G L
Sbjct: 111 AH--GYFCQLIDGLEY----LHSQGIVHKDIKPGNLLLTTGGTL---KISALGVAEALHP 161
Query: 476 ----PSRKASENLAIGRSPEFPEGKRL--THKADVYCFGIILLEVITGRIPGNG 523
+ + S+ + PE G K D++ G+ L + TG P G
Sbjct: 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 82 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 134
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 195 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 316 DLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKL----- 370
DLLR V+G+G L+ + RV ++ E + +Q +
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
H L + S + ++ + E++ G L + R ++P S + +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYS--AEISLA 165
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP--LLPSRKASENLAIGR 488
L +LH+ + + +LK N+L+ E I KLT++G L P S
Sbjct: 166 LNYLHE----RGIIYRDLKLDNVLLDSEGHI---KLTDYGMCKEGLRPGDTTSTFCGTPN 218
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVV 542
+PE G+ D + G+++ E++ GR P + ++ + D++ V+
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 110/278 (39%), Gaps = 39/278 (14%)
Query: 338 LESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVSFYY----SKEEKLIIYE 393
L G A+KR+ ++E ++ + H N+ ++V++ +K E ++
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 394 FLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNI 453
F G+L++ + + G L L ++ +GL + +H+ H +LK +NI
Sbjct: 111 FFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGL----EAIHAKGYAHRDLKPTNI 165
Query: 454 LIFRENDIYRAKL--TNFGFLPLLPSRKA-------SENLAIG-RSPEFPEGKR---LTH 500
L+ E L N + + SR+A ++ I R+PE + +
Sbjct: 166 LLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDE 225
Query: 501 KADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVVDNDWSTDILDVEILAARE 560
+ DV+ G +L ++ G P + D V + V N L+ +
Sbjct: 226 RTDVWSLGCVLYAMMFGEGP-------YDMVFQKGDSVALAVQNQ----------LSIPQ 268
Query: 561 GQNEMLRLTELALECTDIAPEKRPKMSEVLRRIEEIQP 598
L +L + P +RP + +L ++E +QP
Sbjct: 269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 324 VLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL-----KHEN--- 374
++GKG G KA VA+K +KN KK F+ Q Q+ +L KH+
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKN-----KKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 375 --LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLA 432
+ + + + +++E L + +L+DLL + G + L T + + +Q L
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRG-VSLNLTRKFA--QQMCTALL 171
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE-NLAIGRSPE 491
FL S + H +LK NIL+ K+ +FG L R RSPE
Sbjct: 172 FLATPELS--IIHCDLKPENILLCNPKRX-AIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Query: 492 FPEGKRLTHKADVYCFGIILLEVITG 517
G D++ G IL+E+ TG
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 80 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 132
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPE 192
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 193 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 132 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 184
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 244
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 245 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 274
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFRENDI-------YRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PGN 522
D++ G+I+ E+I G + PG
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 126 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 178
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 239 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 268
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 80 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 132
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 192
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 193 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKNMNALSKKE------FVQQMQLLGKLKHENLAK 377
LG+G G YKA + VA+KR++ L +E ++++ LL +L+H N+ +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR----LEHEEEGVPGTAIREVSLLKELQHRNIIE 97
Query: 378 IVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP-LAWTTRLSIIKQTAKGLAFLHQ 436
+ S + +I+E+ N DL + + + P ++ S + Q G+ F
Sbjct: 98 LKSVIHHNHRLHLIFEYAEN----DL---KKYMDKNPDVSMRVIKSFLYQLINGVNF--- 147
Query: 437 TLHSHKVPHANLKSSNIL--IFRENDIYRAKLTNFGFLPL--LPSRKASENLAI--GRSP 490
HS + H +LK N+L + ++ K+ +FG +P R+ + + R P
Sbjct: 148 -CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP 206
Query: 491 EFPEGKR-LTHKADVYCFGIILLEVI--TGRIPGN 522
E G R + D++ I E++ T PG+
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 87 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 139
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 199
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 200 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 229
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 48/217 (22%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSK 385
G V S Y A L VAVK++ + + + ++++LL LKHEN+ ++
Sbjct: 42 GSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV---- 95
Query: 386 EEKLIIYEFLPNGSLFD-----LLHESRGVGRIPLAWTTRLS------IIKQTAKGLAFL 434
F P S+ D L+ G + LS ++ Q +GL ++
Sbjct: 96 --------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------IGR 488
H S + H +LK SN+ + ++++ ++ +FG +R+A E + R
Sbjct: 148 H----SAGIIHRDLKPSNVAVNEDSEL---RILDFGL-----ARQADEEMTGYVATRWYR 195
Query: 489 SPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
+PE D++ G I+ E++ G+ PG+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFYYSKE 386
G V S Y ++ VA+K++ + + ++++Q+L + +HEN+ I +
Sbjct: 57 GMVSSAYDHVRKTR--VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRAST 114
Query: 387 ----EKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
+ I + L L+ LL + L+ + Q +GL ++H S
Sbjct: 115 LEAMRDVYIVQDLMETDLYKLLKSQQ------LSNDHICYFLYQILRGLKYIH----SAN 164
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRK-----ASENLAIG--RSPEFP-E 494
V H +LK SN+LI D+ K+ +FG + +E +A R+PE
Sbjct: 165 VLHRDLKPSNLLINTTCDL---KICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 495 GKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 81 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 133
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 193
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 194 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 96 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 148
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 208
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ D++ G+I+ ++ G P
Sbjct: 209 KYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 86 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 138
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 198
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 199 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 228
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 88 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 140
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 200
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 201 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 230
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 82 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 134
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEGKRLT 499
S + H ++K N+L + KLT+FGF A E G++
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------AKETT----------GEKYD 176
Query: 500 HKADVYCFGIILLEVITGRIP 520
D++ G+I+ ++ G P
Sbjct: 177 KSCDMWSLGVIMYILLCGYPP 197
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 37 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 94
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 95 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 142
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 195
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PGN 522
E G D++ G I+ E+I G + PG
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 82 NLYAGRKCLLIVMECLDGGELF-----SRIQDRGDQAFTEREA--SEIMKSIGEAIQYLH 134
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 194
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGSPG 526
+ D++ G+I+ ++ G P + G
Sbjct: 195 KYDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFRENDI-------YRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PGN 522
D++ G+I+ E+I G + PG
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 40/237 (16%)
Query: 322 AEVLGKGKVGSTYKATL----ESGAV--VAVKRVKNMNALSKKE-FVQQMQLLGKL-KHE 373
+VLG G G AT ++G VAVK +K S++E + +++++ +L HE
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 374 NLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESR-----------GVGRIP-------L 415
N+ ++ +I+E+ G L + L R R+ L
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 416 AWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL 475
+ L Q AKG+ FL H +L + N+L+ + K+ +FG +
Sbjct: 170 TFEDLLCFAYQVAKGMEFLE----FKSCVHRDLAARNVLVTHGKVV---KICDFGLARDI 222
Query: 476 PSR-----KASENLAIG-RSPEFPEGKRLTHKADVYCFGIILLEVIT-GRIPGNGSP 525
S + + L + +PE T K+DV+ +GI+L E+ + G P G P
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 37/230 (16%)
Query: 316 DLLRASAEV---LGKGKVGSTYKATLES--GAVVAVKRVKNMN-----ALSKKEFVQQMQ 365
D+L A E+ LG+G G + G VAVK VKN++ A S+ + ++ +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 366 LLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIK 425
+++ ++ I++E L S +D + E+ G +P RL I+
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKEN---GFLPF----RLDHIR 121
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRA-----------------KLTN 468
+ A + LHS+K+ H +LK NIL F ++D A K+ +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENIL-FVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 469 FGFLPLLPSRKAS-ENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITG 517
FG ++ + R+PE + DV+ G IL+E G
Sbjct: 181 FGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 141
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 194
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PGN 522
E G D++ G I+ E+I G + PG
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 356 SKKEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP 414
SK++ +++++L + +H N+ + Y + ++ E + G L D + +
Sbjct: 63 SKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSERE 122
Query: 415 LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRA-KLTNFGFLP 473
++ L I +T + LHS V H +LK SNIL E+ ++ +FGF
Sbjct: 123 ASFV--LHTIGKTV-------EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 474 LLPSRKA-------SENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
L + + N +PE + + D++ GI+L ++ G P P
Sbjct: 174 QLRAENGLLMTPCYTANFV---APEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 527 NN 528
+
Sbjct: 231 DT 232
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 21/182 (11%)
Query: 356 SKKEFVQQMQLLGKL-KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIP 414
SK++ +++++L + +H N+ + Y + ++ E G L D + +
Sbjct: 58 SKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSERE 117
Query: 415 LAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFREN-DIYRAKLTNFGFLP 473
A +I K + LH+ V H +LK SNIL E+ + ++ +FGF
Sbjct: 118 -ASAVLFTITKTV--------EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 474 -------LLPSRKASENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPG 526
LL + + N +PE E + D++ G++L +TG P P
Sbjct: 169 QLRAENGLLXTPCYTANFV---APEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD 225
Query: 527 NN 528
+
Sbjct: 226 DT 227
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 324 VLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL-----KHEN--- 374
++GKG G KA VA+K +KN KK F+ Q Q+ +L KH+
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKN-----KKAFLNQAQIEVRLLELMNKHDTEMK 115
Query: 375 --LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLA 432
+ + + + +++E L + +L+DLL + G + L T + + +Q L
Sbjct: 116 YYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRG-VSLNLTRKFA--QQMCTALL 171
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE-NLAIGRSPE 491
FL S + H +LK NIL+ K+ +FG L R RSPE
Sbjct: 172 FLATPELS--IIHCDLKPENILLCNPKR-SAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 228
Query: 492 FPEGKRLTHKADVYCFGIILLEVITG 517
G D++ G IL+E+ TG
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 48/217 (22%)
Query: 328 GKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYYSK 385
G V S Y A L VAVK++ + + + ++++LL LKHEN+ ++
Sbjct: 34 GSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV---- 87
Query: 386 EEKLIIYEFLPNGSLFD-----LLHESRGVGRIPLAWTTRLS------IIKQTAKGLAFL 434
F P S+ D L+ G + LS ++ Q +GL ++
Sbjct: 88 --------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLA------IGR 488
H S + H +LK SN+ + N+ ++ +FG +R+A E + R
Sbjct: 140 H----SAGIIHRDLKPSNVAV---NEDCELRILDFGL-----ARQADEEMTGYVATRWYR 187
Query: 489 SPEFP-EGKRLTHKADVYCFGIILLEVITGR--IPGN 522
+PE D++ G I+ E++ G+ PG+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 38/214 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 141
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 194
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PGN 522
E G D++ G I+ E+I G + PG
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQM---QLLGKLKHENL 375
++LGKG G KAT G A+K +K ++K E + ++L +H L
Sbjct: 16 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R + L +LH
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGELF--FHLSRE--RVFSEDRARF-YGAEIVSALDYLH 127
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
V + +LK N+++ ++ I K+T+FG A+ G +PE
Sbjct: 128 S---EKNVVYRDLKLENLMLDKDGHI---KITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQM---QLLGKLKHENL 375
++LGKG G KAT G A+K +K ++K E + ++L +H L
Sbjct: 14 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R + L +LH
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELF--FHLSRE--RVFSEDRARF-YGAEIVSALDYLH 125
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
V + +LK N+++ ++ I K+T+FG A+ G +PE
Sbjct: 126 S---EKNVVYRDLKLENLMLDKDGHI---KITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 324 VLGKGKVGSTYKATLE-SGAVVAVKRVKNMNALSKKEFVQQMQLLGKL-----KHEN--- 374
++GKG G KA VA+K +KN KK F+ Q Q+ +L KH+
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKN-----KKAFLNQAQIEVRLLELMNKHDTEMK 96
Query: 375 --LAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLA 432
+ + + + +++E L + +L+DLL + G + L T + + +Q L
Sbjct: 97 YYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRG-VSLNLTRKFA--QQMCTALL 152
Query: 433 FLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASE-NLAIGRSPE 491
FL S + H +LK NIL+ K+ +FG L R RSPE
Sbjct: 153 FLATPELS--IIHCDLKPENILLCNPKR-SAIKIVDFGSSCQLGQRIYQXIQSRFYRSPE 209
Query: 492 FPEGKRLTHKADVYCFGIILLEVITG 517
G D++ G IL+E+ TG
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 37/230 (16%)
Query: 316 DLLRASAEV---LGKGKVGSTYKATLES--GAVVAVKRVKNMN-----ALSKKEFVQQMQ 365
D+L A E+ LG+G G + G VAVK VKN++ A S+ + ++ +
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 366 LLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIK 425
+++ ++ I++E L S +D + E+ G +P RL I+
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKEN---GFLPF----RLDHIR 121
Query: 426 QTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRA-----------------KLTN 468
+ A + LHS+K+ H +LK NIL F ++D A K+ +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENIL-FVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 469 FGFLPLLPSRKAS-ENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITG 517
FG ++ R+PE + DV+ G IL+E G
Sbjct: 181 FGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQM---QLLGKLKHENL 375
++LGKG G KAT G A+K +K ++K E + ++L +H L
Sbjct: 15 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R + L +LH
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELF--FHLSRE--RVFSEDRARF-YGAEIVSALDYLH 126
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
V + +LK N+++ ++ I K+T+FG A+ G +PE
Sbjct: 127 S---EKNVVYRDLKLENLMLDKDGHI---KITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 40/215 (18%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 141
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RS 489
LHS + H +LK SNI++ + + K+ +FG +R A + + R+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTL---KILDFGL-----ARTAGTSFMMTPEVVTRYYRA 193
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRI--PGN 522
PE G D++ G I+ E+I G + PG
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQM---QLLGKLKHENL 375
++LGKG G KAT G A+K +K ++K E + ++L +H L
Sbjct: 157 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R + L +LH
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELF--FHLSRE--RVFSEDRARF-YGAEIVSALDYLH 268
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
V + +LK N+++ ++ I K+T+FG A+ G +PE
Sbjct: 269 S---EKNVVYRDLKLENLMLDKDGHI---KITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 316 DLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKL----- 370
DLLR V+G+G L+ + +V ++ E + +Q +
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
H L + S + ++ + E++ G L + R ++P S + +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYS--AEISLA 122
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP--LLPSRKASENLAIGR 488
L +LH+ + + +LK N+L+ E I KLT++G L P S
Sbjct: 123 LNYLHE----RGIIYRDLKLDNVLLDSEGHI---KLTDYGMCKEGLRPGDTTSXFCGTPN 175
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVV 542
+PE G+ D + G+++ E++ GR P + ++ + D++ V+
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 316 DLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKL----- 370
DLLR V+G+G L+ + +V ++ E + +Q +
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
H L + S + ++ + E++ G L + R ++P S + +
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYS--AEISLA 118
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP--LLPSRKASENLAIGR 488
L +LH+ + + +LK N+L+ E I KLT++G L P S
Sbjct: 119 LNYLHE----RGIIYRDLKLDNVLLDSEGHI---KLTDYGMCKEGLRPGDTTSXFCGTPN 171
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVV 542
+PE G+ D + G+++ E++ GR P + ++ + D++ V+
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 25/209 (11%)
Query: 323 EVLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQM---QLLGKLKHENL 375
++LGKG G KAT G A+K +K ++K E + ++L +H L
Sbjct: 154 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 376 AKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLH 435
+ + + + + E+ G LF H SR R+ R + L +LH
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELF--FHLSRE--RVFSEDRARF-YGAEIVSALDYLH 265
Query: 436 QTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPE 491
V + +LK N+++ ++ I K+T+FG A+ G +PE
Sbjct: 266 S---EKNVVYRDLKLENLMLDKDGHI---KITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 492 FPEGKRLTHKADVYCFGIILLEVITGRIP 520
E D + G+++ E++ GR+P
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E +GKG + L +G A K + K ++A ++ ++ ++ LKH N+ ++
Sbjct: 10 EDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q L LH
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQ------ILEAVLH 118
Query: 440 SHK--VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
H+ V H +LK N+L+ + KL +FG + + + G SPE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
+ D++ G+IL ++ G P
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 93/236 (39%), Gaps = 25/236 (10%)
Query: 316 DLLRASAEVLGKGKVGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKL----- 370
DLLR V+G+G L+ + +V ++ E + +Q +
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 371 KHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKG 430
H L + S + ++ + E++ G L + R ++P S + +
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYS--AEISLA 133
Query: 431 LAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLP--LLPSRKASENLAIGR 488
L +LH+ + + +LK N+L+ E I KLT++G L P S
Sbjct: 134 LNYLHE----RGIIYRDLKLDNVLLDSEGHI---KLTDYGMCKEGLRPGDTTSXFCGTPN 186
Query: 489 --SPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNETSGDLSDWVRMVV 542
+PE G+ D + G+++ E++ GR P + ++ + D++ V+
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESRG-VGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PGN 522
D++ G I+ E+I G + PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFREND-------IYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PGN 522
D++ G I+ E+I G + PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 20/207 (9%)
Query: 323 EVLGKGK---VGSTYKATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E LGKG V K + K ++A ++ ++ ++ LKH N+ ++
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ +I++ + G LF+ + V R + I+Q L LH
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQ------ILEAVLH 125
Query: 440 SHK--VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
H+ V H NLK N+L+ + KL +FG + + + G SPE
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
D++ G+IL ++ G P
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI----KHLHSAG 146
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PGN 522
D++ G I+ E+I G + PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFREND-------IYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PGN 522
D++ G I+ E+I G + PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RSPEFPE 494
+ H +LK SNI++ + + K+ +FG +R A + + R+PE
Sbjct: 147 IIHRDLKPSNIVVKSDXTL---KILDFGL-----ARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 495 GKRLTHKADVYCFGIILLEVITGRI--PG 521
G D++ G I+ E++ +I PG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 362 QQMQLLGKLKHENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRL 421
++ + G+L+ ++ I F + +L + L NG DL R G PLA +
Sbjct: 83 REARTAGRLQEPHVVPIHDFG-EIDGQLYVDXRLING--VDLAAXLRRQG--PLAPPRAV 137
Query: 422 SIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKAS 481
+I++Q L H +H+ ++K NIL+ ++ Y L +FG K +
Sbjct: 138 AIVRQIGSALDAAHAAGATHR----DVKPENILVSADDFAY---LVDFGIASATTDEKLT 190
Query: 482 E-NLAIG----RSPEFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ +G +PE T++AD+Y +L E +TG P G
Sbjct: 191 QLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 20/207 (9%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E LGKG + + +G A K + K ++A ++ ++ ++ LKH N+ ++
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ +I++ + G LF+ + V R + I+Q L LH
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQ------ILEAVLH 136
Query: 440 SHK--VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFP 493
H+ V H +LK N+L+ + KL +FG + + + G SPE
Sbjct: 137 CHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 494 EGKRLTHKADVYCFGIILLEVITGRIP 520
D++ G+IL ++ G P
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 86/208 (41%), Gaps = 20/208 (9%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN---MNALSKKEFVQQMQLLGKLKHENLAKIVS 380
LGKG ++ + ++ V A K V + +++ ++ + L H+++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F+ + ++ E SL +L H+ R P A ++Q G Q LH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY----YLRQIVLGC----QYLHR 133
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
++V H +LK N+ + N+ K+ +FG + + + G +PE K
Sbjct: 134 NRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 497 RLTHKADVYCFGIILLEVITGRIPGNGS 524
+ + DV+ G I+ ++ G+ P S
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN---MNALSKKEFVQQMQLLGKLKHENLAKIVS 380
LGKG ++ + ++ V A K V + +++ ++ + L H+++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F+ + ++ E SL +L H+ R P A ++Q G +LH+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY----YLRQIVLGCQYLHR---- 157
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
++V H +LK N+ + N+ K+ +FG + + + G +PE K
Sbjct: 158 NRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ + DV+ G I+ ++ G+ P
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN---MNALSKKEFVQQMQLLGKLKHENLAKIVS 380
LGKG ++ + ++ V A K V + +++ ++ + L H+++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F+ + ++ E SL +L H+ R P A ++Q G +LH+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY----YLRQIVLGCQYLHR---- 159
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
++V H +LK N+ + N+ K+ +FG + + + G +PE K
Sbjct: 160 NRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ + DV+ G I+ ++ G+ P
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 30 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 87
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 88 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 135
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 188
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PG 521
E G D++ G I+ E++ +I PG
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 141
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RS 489
LHS + H +LK SNI++ + + K+ +FG +R A + + R+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTL---KILDFGL-----ARTAGTSFMMEPEVVTRYYRA 193
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRI--PG 521
PE G D++ G I+ E++ +I PG
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVCHKILFPG 227
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKN-------MNALSK----KEFVQQMQLLGKLKHE 373
+ G G+ G VA+KRV N +N LS K +++++LL H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 374 NLAKIVSFYYSKEE----KLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
N+ + + EE KL + L L ++H+ R I ++ +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR----IVISPQHIQYFMYHILL 145
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-- 487
GL LH+ V H +L NIL+ NDI + +F L + A++ +
Sbjct: 146 GLHVLHEA----GVVHRDLHPGNILLADNNDI---TICDFN-LAREDTADANKTHYVTHR 197
Query: 488 --RSPEFP-EGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNE 529
R+PE + K T D++ G ++ E+ + GS N+
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 41 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 98
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 99 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 146
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 199
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PG 521
E G D++ G I+ E++ +I PG
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 32/225 (14%)
Query: 325 LGKGKVGSTYKATLESGAVVAVKRVKN-------MNALSK----KEFVQQMQLLGKLKHE 373
+ G G+ G VA+KRV N +N LS K +++++LL H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 374 NLAKIVSFYYSKEE----KLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAK 429
N+ + + EE KL + L L ++H+ R I ++ +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR----IVISPQHIQYFMYHILL 145
Query: 430 GLAFLHQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG-- 487
GL LH+ V H +L NIL+ NDI + +F L + A++ +
Sbjct: 146 GLHVLHEA----GVVHRDLHPGNILLADNNDI---TICDFN-LAREDTADANKTHYVTHR 197
Query: 488 --RSPEFP-EGKRLTHKADVYCFGIILLEVITGRIPGNGSPGNNE 529
R+PE + K T D++ G ++ E+ + GS N+
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ 242
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RSPEFPE 494
+ H +LK SNI++ + + K+ +FG +R A + + R+PE
Sbjct: 147 IIHRDLKPSNIVVKSDXTL---KILDFGL-----ARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 495 GKRLTHKADVYCFGIILLEVITGRI--PG 521
G D++ G I+ E++ +I PG
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ Y ++ LI+ E L G LF SR R A+T R + + K + Q LH
Sbjct: 126 NLYAGRKCLLIVXECLDGGELF-----SRIQDRGDQAFTEREA--SEIXKSIGEAIQYLH 178
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR---SPEFPEGK 496
S + H ++K N+L + KLT+FGF S + +PE +
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE 238
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ D + G+I ++ G P
Sbjct: 239 KYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 87 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGI----KHLHSAG 139
Query: 443 VPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RSPEFPE 494
+ H +LK SNI++ + + K+ +FG +R A + + R+PE
Sbjct: 140 IIHRDLKPSNIVVKSDXTL---KILDFGL-----ARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 495 GKRLTHKADVYCFGIILLEVITGRI--PG 521
G D++ G I+ E++ +I PG
Sbjct: 192 GMGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHES-RGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFREND-------IYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 141
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 141
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 149
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 150 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 141
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN---MNALSKKEFVQQMQLLGKLKHENLAKIVS 380
LGKG ++ + ++ V A K V + +++ ++ + L H+++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F+ + ++ E SL +L H+ R P A ++Q G +LH+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY----YLRQIVLGCQYLHR---- 135
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
++V H +LK N+ + N+ K+ +FG + + G +PE K
Sbjct: 136 NRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ + DV+ G I+ ++ G+ P
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN---MNALSKKEFVQQMQLLGKLKHENLAKIVS 380
LGKG ++ + ++ V A K V + +++ ++ + L H+++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F+ + ++ E SL +L H+ R P A ++Q G +LH+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY----YLRQIVLGCQYLHR---- 135
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
++V H +LK N+ + N+ K+ +FG + + G +PE K
Sbjct: 136 NRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ + DV+ G I+ ++ G+ P
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 141
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 142 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 324 VLGKGKVG----STYKATLESGAVVAVKR-VKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
VLGKG G S K T E AV +K+ V + + V++ L K L ++
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
S + + + + E++ G DL++ + VGR + + A GL FL
Sbjct: 87 HSCFQTMDRLYFVMEYVNGG---DLMYHIQQVGRFKEPHAVFYA--AEIAIGLFFLQ--- 138
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPE 494
S + + +LK N+++ E I K+ +FG + G +PE
Sbjct: 139 -SKGIIYRDLKLDNVMLDSEGHI---KIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIA 194
Query: 495 GKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ D + FG++L E++ G+ P G
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 40/214 (18%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A LE VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFT 93
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ I+ E + + +L ++ R+ L IK
Sbjct: 94 PQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 141
Query: 438 LHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIG--------RS 489
LHS + H +LK SNI++ + + K+ +FG +R A + + R+
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTL---KILDFGL-----ARTAGTSFMMEPEVVTRYYRA 193
Query: 490 PEFPEGKRLTHKADVYCFGIILLEVITGRI--PG 521
PE G D++ G I+ E++ +I PG
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 143
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 85/204 (41%), Gaps = 20/204 (9%)
Query: 325 LGKGKVGSTYKAT-LESGAVVAVKRVKN---MNALSKKEFVQQMQLLGKLKHENLAKIVS 380
LGKG ++ + ++ V A K V + +++ ++ + L H+++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
F+ + ++ E SL +L H+ R P A ++Q G +LH+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARY----YLRQIVLGCQYLHR---- 139
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEGK 496
++V H +LK N+ + N+ K+ +FG + + G +PE K
Sbjct: 140 NRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 497 RLTHKADVYCFGIILLEVITGRIP 520
+ + DV+ G I+ ++ G+ P
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ ++ E + + +L ++ R+ L IK
Sbjct: 132 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 179
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 232
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PG 521
E G D++ G I+ E++ +I PG
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 145
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKAS----ENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P + E +A R+PE
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 146
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKAS----ENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P + E +A R+PE
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILIFREND-------IYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNM-NALSKKEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 145
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 141
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 142 -SANVLHRDLKPSNLLLNTTXDL---KIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 145
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 146 -SANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 88 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 140
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 193
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 161
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 162 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 87 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 139
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 192
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFPG 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 88 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 140
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 193
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKILFPG 221
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 324 VLGKGKVG----STYKATLESGAVVAVKR-VKNMNALSKKEFVQQMQLLGKLKHENLAKI 378
VLGKG G S K T E AV +K+ V + + V++ L K L ++
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI--PLAWTTRLSIIKQTAKGLAFLHQ 436
S + + + + E++ G DL++ + VGR P A + + A GL FL
Sbjct: 408 HSCFQTMDRLYFVMEYVNGG---DLMYHIQQVGRFKEPHA----VFYAAEIAIGLFFLQ- 459
Query: 437 TLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEF 492
S + + +LK N+++ E I K+ +FG + G +PE
Sbjct: 460 ---SKGIIYRDLKLDNVMLDSEGHI---KIADFGMCKENIWDGVTTKXFCGTPDYIAPEI 513
Query: 493 PEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
+ D + FG++L E++ G+ P G
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L +HEN+ I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 143
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ +D+ K+ +FG + P +E +A R+PE
Sbjct: 144 -SANVLHRDLKPSNLLLNTTSDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 94 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 146
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 199
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKILFPG 227
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 95 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 147
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 200
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 146
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 147 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 147
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 148 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 204 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 138
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 139 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 195 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 145
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 95 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 147
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 200
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKILFPG 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 139
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 35 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 384 SKEEKLIIYEFLPNGSLFDLLHESR-GVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHK 442
++ + EF + +L+ + V ++ L ++ Q G+ + LHS
Sbjct: 93 PQK---TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGI----KHLHSAG 145
Query: 443 VPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSPEFPEG 495
+ H +LK SNI++ + + R T+F P + +R R+PE G
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAPEVILG 198
Query: 496 KRLTHKADVYCFGIILLEVITGRI--PG 521
D++ G I+ E++ +I PG
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHKILFPG 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + + L L+ LL L+ + Q +GL ++H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 161
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 162 -SANVLHRDLKPSNLLLNTTXDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 139
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 140 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 196 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 325 LGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+G G G K + E AV ++R + + A K+E + L +H N+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL----RHPNIVRFKE 82
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ I+ E+ G LF+ + + GR + +Q G+++ H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNA---GR--FSEDEARFFFQQLISGVSY----CHA 133
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLP---LLPSRKASENLAIGRSPEFPEGKR 497
+V H +LK N L+ + R K+ +FG+ L K++ +PE K
Sbjct: 134 MQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 498 LTHK-ADVYCFGIILLEVITGRIP 520
K ADV+ G+ L ++ G P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 326 GKGKVGSTYKATLESGAVVAVKRVKN--MNALSKKEFVQQMQLLGKLKHENLAKIVSFYY 383
+G V + Y A L+ VA+K++ N K +++ L+ + H+N+ +++ +
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 384 SK------EEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQT 437
+ ++ ++ E + + +L ++ R+ L IK
Sbjct: 132 PQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLLYQMLCGIKH----------- 179
Query: 438 LHSHKVPHANLKSSNILI-------FRENDIYRAKLTNFGFLPLLPSRKASENLAIGRSP 490
LHS + H +LK SNI++ + + R T+F P + +R R+P
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY-------RAP 232
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRI--PG 521
E G D++ G I+ E++ +I PG
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L + +HEN+ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQH------LSNDHICYFLYQILRGLKYIH--- 145
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA+K++ + + ++++++L +HEN+ I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 143
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 144 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 325 LGKGKVGSTYKATLESGAV-VAVKRVKNMNALSK-KEFVQQMQLLGKLKHENLAKIVSFY 382
+G+G G A V VA++++ + + ++++++L + +HEN+ I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 383 YS----KEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTL 438
+ + + + I + L L+ LL L+ + Q +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIH--- 145
Query: 439 HSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLL-PSRKA----SENLAIG--RSPE 491
S V H +LK SN+L+ D+ K+ +FG + P +E +A R+PE
Sbjct: 146 -SANVLHRDLKPSNLLLNTTCDL---KICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 492 FP-EGKRLTHKADVYCFGIILLEVITGR--IPG 521
K T D++ G IL E+++ R PG
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 28/207 (13%)
Query: 325 LGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+G G G K E AV ++R + ++ K+E + L +H N+ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKE 82
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ I+ E+ G LF+ + + GR + +Q G+++ H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNA---GR--FSEDEARFFFQQLISGVSY----AHA 133
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGF--LPLLPSRKASENLAIGR----SPEFPE 494
+V H +LK N L+ + R K+ +FG+ +L S+ S A+G +PE
Sbjct: 134 MQVAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLHSQPKS---AVGTPAYIAPEVLL 189
Query: 495 GKRLTHK-ADVYCFGIILLEVITGRIP 520
K K ADV+ G+ L ++ G P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 324 VLGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKL-KHENLAKI 378
VLGKG G K T E A+ +K+ + + + + ++L L K L ++
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 379 VSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRI--PLA--WTTRLSIIKQTAKGLAFL 434
S + + + + E++ G DL++ + VG+ P A + +SI GL FL
Sbjct: 86 HSCFQTVDRLYFVMEYVNGG---DLMYHIQQVGKFKEPQAVFYAAEISI------GLFFL 136
Query: 435 HQTLHSHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SP 490
H+ + + +LK N+++ E I K+ +FG + G +P
Sbjct: 137 HK----RGIIYRDLKLDNVMLDSEGHI---KIADFGMCKEHMMDGVTTREFCGTPDYIAP 189
Query: 491 EFPEGKRLTHKADVYCFGIILLEVITGRIPGNG 523
E + D + +G++L E++ G+ P +G
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 325 LGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+G G G K + E AV ++R + ++ K+E + L +H N+ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKE 81
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ I+ E+ G LF+ + + GR + +Q G+++ H+
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICNA---GR--FSEDEARFFFQQLISGVSY----CHA 132
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLP---LLPSRKASENLAIGRSPEFPEGKR 497
+V H +LK N L+ + R K+ +FG+ L K++ +PE K
Sbjct: 133 MQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 498 LTHK-ADVYCFGIILLEVITGRIP 520
K ADV+ G+ L ++ G P
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 323 EVLGKGKVGSTYKATLESGAVVAVKRV-KNMNALSKKEFVQQMQLLGKL-KHENLAKIVS 380
+VLG G G+ + VAVKR+ + + +E +QLL + +H N+ +
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADRE----VQLLRESDEHPNVIRYFC 85
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
++ + I E L +L + + E + + L T +++QT GLA LH S
Sbjct: 86 TEKDRQFQYIAIE-LCAATLQEYV-EQKDFAHLGLEPIT---LLQQTTSGLAHLH----S 136
Query: 441 HKVPHANLKSSNILIFREN--DIYRAKLTNFGFLPLLPSRKASENLAIGR 488
+ H +LK NILI N +A +++FG + LA+GR
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGL---------CKKLAVGR 177
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 16/205 (7%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E LGKG + + +G A K + K ++A ++ ++ ++ LKH N+ ++
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q + + H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESV----NHCH 120
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
+ + H +LK N+L+ ++ KL +FG + + + G SPE
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
D++ G+IL ++ G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 22/204 (10%)
Query: 325 LGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+G G G K + E AV ++R + ++ K+E + L +H N+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKE 82
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ I+ E+ G LF+ + + GR + +Q G+++ H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNA---GR--FSEDEARFFFQQLISGVSY----CHA 133
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLP---LLPSRKASENLAIGRSPEFPEGKR 497
+V H +LK N L+ + R K+ FG+ L K++ +PE K
Sbjct: 134 MQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 498 LTHK-ADVYCFGIILLEVITGRIP 520
K ADV+ G+ L ++ G P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 16/205 (7%)
Query: 323 EVLGKGKVGSTYKAT-LESGAVVAVKRV--KNMNALSKKEFVQQMQLLGKLKHENLAKIV 379
E LGKG + + +G A K + K ++A ++ ++ ++ LKH N+ ++
Sbjct: 10 EELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 69
Query: 380 SFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLH 439
+ ++++ + G LF+ + V R + I+Q + + H
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDI-----VAREYYSEADASHCIQQILESV----NHCH 120
Query: 440 SHKVPHANLKSSNILIFRENDIYRAKLTNFGFLPLLPSRKASENLAIGR----SPEFPEG 495
+ + H +LK N+L+ ++ KL +FG + + + G SPE
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 496 KRLTHKADVYCFGIILLEVITGRIP 520
D++ G+IL ++ G P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 22/204 (10%)
Query: 325 LGKGKVGSTY----KATLESGAVVAVKRVKNMNALSKKEFVQQMQLLGKLKHENLAKIVS 380
+G G G K + E AV ++R + ++ K+E + L +H N+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RHPNIVRFKE 82
Query: 381 FYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHS 440
+ I+ E+ G LF+ + + GR + +Q G+++ H+
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNA---GR--FSEDEARFFFQQLISGVSY----CHA 133
Query: 441 HKVPHANLKSSNILIFRENDIYRAKLTNFGFLP---LLPSRKASENLAIGRSPEFPEGKR 497
+V H +LK N L+ + R K+ FG+ L K + +PE K
Sbjct: 134 MQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 498 LTHK-ADVYCFGIILLEVITGRIP 520
K ADV+ G+ L ++ G P
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 405 HESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNIL---IFRENDI 461
+E RG IPL + ++S KQ GL ++H+ + H ++K N+L + ++
Sbjct: 123 YEHRG---IPLIYVKQIS--KQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENL 174
Query: 462 YRAKLTNFGFLPLLPSRKA-SENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+ K+ + G S RSPE G AD++ ++ E+ITG
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 521 GNGSPGNNETSGD 533
G++ T D
Sbjct: 235 FEPDEGHSYTKDD 247
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Query: 405 HESRGVGRIPLAWTTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNIL---IFRENDI 461
+E RG IPL + ++S KQ GL ++H+ + H ++K N+L + ++
Sbjct: 123 YEHRG---IPLIYVKQIS--KQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENL 174
Query: 462 YRAKLTNFGFLPLLPSRKA-SENLAIGRSPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
+ K+ + G S RSPE G AD++ ++ E+ITG
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 521 GNGSPGNNETSGD 533
G++ T D
Sbjct: 235 FEPDEGHSYTKDD 247
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 14/68 (20%)
Query: 115 VNLETVFLSQNHFSDGIPFGYIDLPKLKKLE--------LQENYLDGQIPPFNQTSLIDF 166
V LE + +S NHF + P + L LKKL ++ N DG SL++
Sbjct: 218 VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG------LASLVEL 271
Query: 167 NVSYNNLD 174
N+++NNL
Sbjct: 272 NLAHNNLS 279
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 418 TTRLSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILIFREN--DIYRAKLT-NFGFLPL 474
T + S + Q + + + +H ++ H ++K++N+L+ +N +Y A ++ + P
Sbjct: 147 TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPN 206
Query: 475 LPSRKASENLAIGR-------SPEFPEGKRLTHKADVYCFGIILLEVITGRIP 520
++ EN G S + +G L+ ++DV G +L + G++P
Sbjct: 207 GNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 25 AERYDLLQIRDSLNS----TANLHSRWTGPPCIDNVSNWFGVSCSNGHIVSLELEEIQLA 80
+ER D + + ++ + T L++ W P I+N+ N + + +V+ EL ++
Sbjct: 117 SERVDRMVLMGAVGTRFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYE 176
Query: 81 GILPPGFLQNIT 92
+ PGF ++ +
Sbjct: 177 ASIQPGFQESFS 188
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 18/155 (11%)
Query: 311 VFDLDDLLRASAEV---LGKGKVGSTYKAT--LESGAVVAVKRVKNMNALSKKEFVQQMQ 365
++ + D L+ E+ LG+G G + GA VA+K +KN+ K+ ++
Sbjct: 24 IYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKY-KEAARLEIN 82
Query: 366 LLGKLK-----HENLAKIVSFYYSKEEKLIIYEFLPNGSLFDLLHESRGVGRIPLAWTTR 420
+L K+ ++NL + ++ + I L S FD L ++ +P
Sbjct: 83 VLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDN---NYLPYPIHQV 139
Query: 421 LSIIKQTAKGLAFLHQTLHSHKVPHANLKSSNILI 455
+ Q + + FLH K+ H +LK NIL
Sbjct: 140 RHMAFQLCQAVKFLHDN----KLTHTDLKPENILF 170
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,963,731
Number of Sequences: 62578
Number of extensions: 687020
Number of successful extensions: 3238
Number of sequences better than 100.0: 919
Number of HSP's better than 100.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 625
Number of HSP's that attempted gapping in prelim test: 1991
Number of HSP's gapped (non-prelim): 1050
length of query: 604
length of database: 14,973,337
effective HSP length: 104
effective length of query: 500
effective length of database: 8,465,225
effective search space: 4232612500
effective search space used: 4232612500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)