Query         007428
Match_columns 604
No_of_seqs    541 out of 3466
Neff          7.5 
Searched_HMMs 29240
Date          Tue Mar 26 01:34:42 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007428hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4b99_A Mitogen-activated prote 100.0 1.6E-68 5.4E-73  575.4  33.1  338  111-451    52-391 (398)
  2 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.2E-62 2.1E-66  505.9  23.2  262  113-413    32-301 (311)
  3 4fih_A Serine/threonine-protei 100.0 3.7E-61 1.3E-65  507.2  26.0  257  112-409    73-330 (346)
  4 3hyh_A Carbon catabolite-derep 100.0 6.8E-61 2.3E-65  490.8  25.2  255  112-408    12-268 (275)
  5 4b9d_A Serine/threonine-protei 100.0 4.6E-61 1.6E-65  507.2  23.8  257  112-408    23-282 (350)
  6 3rp9_A Mitogen-activated prote 100.0   5E-60 1.7E-64  517.7  30.3  342  111-454    51-447 (458)
  7 3fpq_A Serine/threonine-protei 100.0 6.3E-60 2.2E-64  487.4  28.1  259  113-408    25-288 (290)
  8 4fie_A Serine/threonine-protei 100.0 8.2E-60 2.8E-64  508.8  28.4  257  112-409   150-407 (423)
  9 3n9x_A Phosphotransferase; mal 100.0 5.3E-59 1.8E-63  506.7  34.0  342  109-453    22-411 (432)
 10 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-60 5.5E-65  494.6  18.7  258  112-410    23-289 (304)
 11 4g3f_A NF-kappa-beta-inducing  100.0 4.6E-59 1.6E-63  489.6  22.1  258  112-411    57-331 (336)
 12 1cm8_A Phosphorylated MAP kina 100.0 1.4E-57 4.8E-62  485.2  32.5  331  111-452    23-354 (367)
 13 4f9c_A Cell division cycle 7-r 100.0   6E-58 2.1E-62  487.3  24.8  285  112-409    20-359 (361)
 14 3oz6_A Mitogen-activated prote 100.0   2E-57 6.8E-62  486.5  28.6  336  112-454     8-379 (388)
 15 2fst_X Mitogen-activated prote 100.0 1.8E-57 6.2E-62  484.6  25.6  333  111-454    27-360 (367)
 16 3ttj_A Mitogen-activated prote 100.0 1.2E-56 4.2E-61  492.8  28.1  330  112-451    61-403 (464)
 17 4g31_A Eukaryotic translation  100.0 1.1E-56 3.6E-61  465.9  23.7  264  113-411     5-288 (299)
 18 3qyz_A Mitogen-activated prote 100.0 5.6E-55 1.9E-59  463.5  31.8  337  111-452    25-361 (364)
 19 3uto_A Twitchin; kinase, muscl 100.0 9.7E-55 3.3E-59  489.1  26.7  262  112-413   156-421 (573)
 20 3omv_A RAF proto-oncogene seri 100.0 1.6E-54 5.6E-59  450.3  25.2  257  112-403    35-294 (307)
 21 3v5w_A G-protein coupled recep 100.0   1E-54 3.5E-59  489.9  24.1  261  112-411   188-458 (689)
 22 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-54 3.6E-59  450.7  20.8  257  112-410    12-288 (299)
 23 4exu_A Mitogen-activated prote 100.0   3E-53   1E-57  451.8  30.7  329  112-451    41-370 (371)
 24 4aoj_A High affinity nerve gro 100.0 1.4E-53 4.7E-58  448.1  26.6  251  113-403    41-313 (329)
 25 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-52 3.8E-57  442.0  30.9  334  111-447     9-352 (353)
 26 3coi_A Mitogen-activated prote 100.0 1.2E-52 4.1E-57  443.2  30.4  329  112-451    23-352 (353)
 27 4gt4_A Tyrosine-protein kinase 100.0 2.1E-53 7.2E-58  442.7  23.9  253  112-403    25-300 (308)
 28 2xrw_A Mitogen-activated prote 100.0 8.1E-53 2.8E-57  448.5  26.2  329  112-450    24-365 (371)
 29 3niz_A Rhodanese family protei 100.0 4.2E-52 1.4E-56  432.2  27.7  290  110-410    18-308 (311)
 30 4ase_A Vascular endothelial gr 100.0 1.5E-52   5E-57  444.1  24.2  255  112-403    63-341 (353)
 31 3o0g_A Cell division protein k 100.0 7.9E-52 2.7E-56  424.8  27.1  287  113-410     2-290 (292)
 32 1ob3_A PFPK5, cell division co 100.0   1E-51 3.4E-56  423.6  25.1  284  113-408     2-286 (288)
 33 3fe3_A MAP/microtubule affinit 100.0 4.6E-51 1.6E-55  428.6  30.6  258  112-411    14-273 (328)
 34 3pg1_A Mitogen-activated prote 100.0 5.9E-51   2E-55  431.1  28.3  330  112-450    21-361 (362)
 35 3g33_A Cell division protein k 100.0 1.9E-51 6.4E-56  425.3  22.4  288  112-409     8-303 (308)
 36 4agu_A Cyclin-dependent kinase 100.0   1E-50 3.4E-55  419.6  26.7  288  113-412     3-294 (311)
 37 2pmi_A Negative RE, cyclin-dep 100.0 3.5E-51 1.2E-55  426.1  21.6  290  112-413     4-304 (317)
 38 3gbz_A Kinase, CMGC CDK; ssgci 100.0   1E-50 3.5E-55  424.8  24.9  288  112-410    33-326 (329)
 39 4e7w_A Glycogen synthase kinas 100.0 1.4E-50 4.9E-55  435.1  25.4  288  112-415    39-334 (394)
 40 2yab_A Death-associated protei 100.0 5.4E-50 1.9E-54  426.2  29.2  261  111-409    10-279 (361)
 41 3mtl_A Cell division protein k 100.0 3.6E-51 1.2E-55  427.4  19.6  289  113-412     2-291 (324)
 42 1j1b_A Glycogen synthase kinas 100.0 3.6E-50 1.2E-54  435.7  28.2  287  113-414    54-348 (420)
 43 1o6l_A RAC-beta serine/threoni 100.0 1.3E-49 4.4E-54  419.3  27.9  258  112-410     4-268 (337)
 44 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.6E-50 1.2E-54  426.2  23.6  259  112-411    22-289 (353)
 45 3eb0_A Putative uncharacterize 100.0 4.2E-50 1.4E-54  429.1  23.9  286  112-411     6-330 (383)
 46 3zgw_A Maternal embryonic leuc 100.0 1.1E-49 3.7E-54  421.7  26.3  258  112-410     9-268 (347)
 47 3soa_A Calcium/calmodulin-depe 100.0 1.9E-49 6.5E-54  433.3  28.7  260  113-409    11-274 (444)
 48 3hmm_A TGF-beta receptor type- 100.0 7.6E-51 2.6E-55  422.7  16.7  275  113-403     3-291 (303)
 49 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.8E-49 6.1E-54  418.2  25.9  256  112-409     8-265 (336)
 50 3mi9_A Cell division protein k 100.0 2.3E-49 7.8E-54  417.5  26.2  297  111-409    15-318 (351)
 51 2bdw_A Hypothetical protein K1 100.0 2.1E-49 7.1E-54  421.5  25.5  259  113-409    29-291 (362)
 52 3kvw_A DYRK2, dual specificity 100.0 7.6E-49 2.6E-53  426.5  29.3  280  112-409    96-415 (429)
 53 3fxz_A Serine/threonine-protei 100.0 4.5E-49 1.5E-53  406.7  26.1  257  112-409    19-276 (297)
 54 3gni_B Strad alpha; kinase fol 100.0   4E-49 1.4E-53  422.0  26.3  297  111-412    23-343 (389)
 55 2y0a_A Death-associated protei 100.0 8.4E-49 2.9E-53  410.3  27.5  258  113-408    11-277 (326)
 56 1tki_A Titin; serine kinase, m 100.0 5.5E-49 1.9E-53  411.2  25.8  257  112-409     4-264 (321)
 57 2r3i_A Cell division protein k 100.0 3.3E-49 1.1E-53  405.6  23.8  289  112-411     2-292 (299)
 58 1ua2_A CAK, cell division prot 100.0 2.9E-49   1E-53  416.6  23.8  288  112-411     9-300 (346)
 59 2i6l_A Mitogen-activated prote 100.0 4.1E-49 1.4E-53  407.6  24.2  298  111-413     9-316 (320)
 60 3llt_A Serine/threonine kinase 100.0 8.7E-49   3E-53  414.1  27.1  278  112-407    34-360 (360)
 61 1xjd_A Protein kinase C, theta 100.0 3.4E-49 1.2E-53  417.5  23.8  259  112-411    16-278 (345)
 62 1fot_A TPK1 delta, CAMP-depend 100.0 6.2E-49 2.1E-53  410.7  25.5  256  112-411     5-267 (318)
 63 4aaa_A Cyclin-dependent kinase 100.0 1.9E-49 6.4E-54  415.0  21.5  285  112-408    24-312 (331)
 64 4aw2_A Serine/threonine-protei 100.0 1.6E-49 5.6E-54  432.8  21.0  269  112-413    73-349 (437)
 65 3a8x_A Protein kinase C IOTA t 100.0 2.3E-48 7.8E-53  411.0  28.5  268  112-411     8-284 (345)
 66 4dc2_A Protein kinase C IOTA t 100.0 1.2E-48 4.1E-53  420.8  26.8  268  112-411    51-327 (396)
 67 2i0e_A Protein kinase C-beta I 100.0 1.1E-48 3.8E-53  414.8  25.1  259  112-411    19-285 (353)
 68 3kk8_A Calcium/calmodulin depe 100.0 6.9E-48 2.4E-52  392.8  29.4  263  112-412     5-271 (284)
 69 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.5E-48 5.2E-53  413.2  24.7  255  112-410    40-301 (350)
 70 3e3p_A Protein kinase, putativ 100.0 1.3E-48 4.4E-53  412.1  24.0  292  112-414    22-326 (360)
 71 3a62_A Ribosomal protein S6 ki 100.0 3.9E-48 1.3E-52  405.4  27.4  258  112-410    16-284 (327)
 72 1blx_A Cyclin-dependent kinase 100.0 2.2E-48 7.7E-53  404.3  24.8  290  112-411    10-305 (326)
 73 3v8s_A RHO-associated protein  100.0 8.1E-49 2.8E-53  424.1  22.1  265  112-411    68-338 (410)
 74 2a2a_A Death-associated protei 100.0 6.8E-48 2.3E-52  401.5  28.0  259  113-409    12-279 (321)
 75 4fr4_A YANK1, serine/threonine 100.0   2E-48   7E-53  417.4  24.5  263  112-411    14-280 (384)
 76 3rgf_A Cyclin-dependent kinase 100.0 8.3E-49 2.8E-53  422.2  21.6  291  113-411    20-342 (405)
 77 2eue_A Carbon catabolite derep 100.0 2.1E-48 7.2E-53  395.6  23.3  256  112-408    12-268 (275)
 78 2r5t_A Serine/threonine-protei 100.0   3E-48   1E-52  414.5  25.4  259  112-411    37-302 (373)
 79 2vd5_A DMPK protein; serine/th 100.0   1E-48 3.5E-53  423.5  22.0  269  112-414    60-339 (412)
 80 3uc3_A Serine/threonine-protei 100.0 3.3E-48 1.1E-52  411.9  24.4  259  112-409    19-281 (361)
 81 3lij_A Calcium/calmodulin depe 100.0 5.3E-48 1.8E-52  427.0  26.6  258  113-409    37-298 (494)
 82 3c0i_A Peripheral plasma membr 100.0 3.2E-48 1.1E-52  410.1  23.8  259  113-409    24-293 (351)
 83 4ejn_A RAC-alpha serine/threon 100.0   2E-48 6.7E-53  424.9  22.7  259  112-411   147-413 (446)
 84 3tki_A Serine/threonine-protei 100.0 3.2E-48 1.1E-52  405.5  22.7  263  112-410     6-269 (323)
 85 2zv2_A Calcium/calmodulin-depe 100.0 4.6E-48 1.6E-52  398.0  23.2  260  112-407    12-297 (298)
 86 3mwu_A Calmodulin-domain prote 100.0 5.6E-48 1.9E-52  425.8  25.5  260  113-411    22-285 (486)
 87 3p1a_A MYT1 kinase, membrane-a 100.0 5.8E-48   2E-52  400.8  24.0  252  113-408    57-310 (311)
 88 1kob_A Twitchin; kinase, intra 100.0 1.2E-47 4.1E-52  411.8  26.5  258  112-409    50-311 (387)
 89 3nsz_A CK II alpha, casein kin 100.0 1.1E-47 3.7E-52  400.2  24.6  284  108-410    31-327 (330)
 90 2qr7_A Ribosomal protein S6 ki 100.0 4.5E-48 1.5E-52  408.2  21.7  256  113-411    22-286 (342)
 91 1wak_A Serine/threonine-protei 100.0 7.2E-48 2.5E-52  410.6  23.3  283  112-408    36-397 (397)
 92 3f3z_A Calcium/calmodulin-depe 100.0 3.3E-47 1.1E-51  386.8  26.5  256  113-409     9-268 (277)
 93 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-47 3.6E-52  401.9  23.4  263  114-411     9-279 (325)
 94 2w4o_A Calcium/calmodulin-depe 100.0 1.3E-47 4.5E-52  405.3  24.3  257  112-410    52-313 (349)
 95 1z57_A Dual specificity protei 100.0 2.4E-47 8.3E-52  397.0  25.8  282  112-410    13-336 (339)
 96 3nyv_A Calmodulin-domain prote 100.0 2.1E-47 7.2E-52  420.6  26.5  260  113-411    26-290 (484)
 97 3q5i_A Protein kinase; CDPK, m 100.0 3.9E-47 1.3E-51  421.1  28.5  260  112-410    35-309 (504)
 98 2vx3_A Dual specificity tyrosi 100.0 3.2E-47 1.1E-51  406.7  26.8  281  112-410    53-380 (382)
 99 3is5_A Calcium-dependent prote 100.0 4.8E-47 1.6E-51  388.5  27.0  256  112-408    21-284 (285)
100 2y94_A 5'-AMP-activated protei 100.0 2.4E-47 8.1E-52  420.0  25.4  256  112-409    15-273 (476)
101 1t4h_A Serine/threonine-protei 100.0 8.9E-47   3E-51  386.5  27.8  260  112-408    25-288 (290)
102 3fdn_A Serine/threonine-protei 100.0 2.7E-47 9.2E-52  388.2  23.4  257  112-411     8-266 (279)
103 3dbq_A Dual specificity protei 100.0 4.3E-47 1.5E-51  399.6  25.4  260  112-408     8-279 (343)
104 2x4f_A Myosin light chain kina 100.0   4E-47 1.4E-51  405.6  25.4  255  115-409    91-349 (373)
105 3qd2_B Eukaryotic translation  100.0 3.6E-47 1.2E-51  395.0  24.3  262  113-409     6-332 (332)
106 3lm5_A Serine/threonine-protei 100.0 3.8E-47 1.3E-51  397.5  24.4  262  113-412    28-297 (327)
107 2ac3_A MAP kinase-interacting  100.0 4.7E-47 1.6E-51  393.0  24.9  281  112-411    11-304 (316)
108 3hko_A Calcium/calmodulin-depe 100.0 1.5E-47   5E-52  401.7  21.0  267  113-411    26-339 (345)
109 2c30_A Serine/threonine-protei 100.0 9.3E-47 3.2E-51  393.9  26.8  255  114-409    46-301 (321)
110 3ork_A Serine/threonine protei 100.0 1.6E-47 5.4E-52  397.0  20.7  269  112-410    11-281 (311)
111 3fme_A Dual specificity mitoge 100.0 6.8E-47 2.3E-51  386.3  24.5  260  112-409     6-273 (290)
112 3pfq_A PKC-B, PKC-beta, protei 100.0 3.6E-47 1.2E-51  435.7  24.7  260  111-411   339-606 (674)
113 1nxk_A MAP kinase-activated pr 100.0 6.7E-47 2.3E-51  407.6  25.1  262  112-410    60-329 (400)
114 2eu9_A Dual specificity protei 100.0 8.5E-47 2.9E-51  395.9  25.3  282  112-410    18-341 (355)
115 2jam_A Calcium/calmodulin-depe 100.0 1.8E-46 6.3E-51  387.1  27.2  256  113-409     9-268 (304)
116 3bhy_A Death-associated protei 100.0   1E-46 3.5E-51  383.9  25.0  261  113-411     5-274 (283)
117 1u5q_A Serine/threonine protei 100.0 1.4E-46 4.8E-51  397.6  26.7  256  112-408    53-311 (348)
118 2zmd_A Dual specificity protei 100.0 1.2E-46   4E-51  404.3  26.4  260  113-409    56-327 (390)
119 3byv_A Rhoptry kinase; malaria 100.0 4.3E-48 1.5E-52  412.7  13.9  254  112-409    72-366 (377)
120 2owb_A Serine/threonine-protei 100.0 3.1E-46 1.1E-50  391.8  27.3  263  108-411    36-300 (335)
121 2acx_A G protein-coupled recep 100.0 3.2E-47 1.1E-51  426.3  20.8  262  112-411   183-453 (576)
122 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-46 7.2E-51  380.7  24.9  251  113-409    11-286 (289)
123 2vgo_A Serine/threonine-protei 100.0 1.8E-46   6E-51  383.2  24.4  257  112-411    13-271 (284)
124 2y7j_A Phosphorylase B kinase  100.0 5.2E-46 1.8E-50  395.5  28.7  259  113-407    94-364 (365)
125 3i6u_A CDS1, serine/threonine- 100.0 3.8E-47 1.3E-51  411.9  20.1  260  112-408   134-405 (419)
126 2wtk_C Serine/threonine-protei 100.0 2.3E-46 7.8E-51  385.5  24.8  267  112-413     4-274 (305)
127 2rku_A Serine/threonine-protei 100.0 5.3E-46 1.8E-50  381.5  27.4  262  110-412    12-275 (294)
128 3q60_A ROP5B; pseudokinase, tr 100.0 4.4E-47 1.5E-51  403.8  19.2  269  113-409    62-359 (371)
129 4eqm_A Protein kinase; transfe 100.0 3.1E-46   1E-50  384.8  24.9  265  112-411    10-276 (294)
130 3dls_A PAS domain-containing s 100.0 4.3E-47 1.5E-51  399.2  18.7  249  112-408    23-280 (335)
131 1phk_A Phosphorylase kinase; g 100.0 7.1E-46 2.4E-50  380.6  27.3  263  112-410    16-291 (298)
132 3eqc_A Dual specificity mitoge 100.0 1.5E-46 5.3E-51  397.2  22.3  284  112-410    32-332 (360)
133 1q8y_A SR protein kinase; tran 100.0 3.6E-46 1.2E-50  394.9  25.2  286  112-411    18-342 (373)
134 3cok_A Serine/threonine-protei 100.0   3E-46   1E-50  379.9  23.1  257  112-409    10-269 (278)
135 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.2E-46 1.1E-50  416.6  25.2  263  112-411   184-457 (543)
136 2wei_A Calmodulin-domain prote 100.0 5.2E-46 1.8E-50  380.6  23.4  260  112-410    21-284 (287)
137 2yex_A Serine/threonine-protei 100.0 3.9E-46 1.4E-50  377.9  22.0  261  113-409     7-268 (276)
138 3an0_A Dual specificity mitoge 100.0 4.6E-46 1.6E-50  390.2  23.2  261  111-410    49-318 (340)
139 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-46 3.9E-51  398.9  18.2  265  112-410    53-329 (355)
140 2h6d_A 5'-AMP-activated protei 100.0 8.8E-46   3E-50  375.7  23.9  256  112-409    10-268 (276)
141 2w5a_A Serine/threonine-protei 100.0 1.1E-45 3.9E-50  375.5  23.2  259  112-408     5-273 (279)
142 2x7f_A TRAF2 and NCK-interacti 100.0 2.8E-45 9.7E-50  381.3  26.6  264  111-409    22-293 (326)
143 2ycf_A Serine/threonine-protei 100.0 1.2E-45 4.2E-50  384.3  23.3  259  113-408    10-280 (322)
144 3kul_A Ephrin type-A receptor  100.0 1.7E-45 5.7E-50  385.1  24.4  254  111-402    47-306 (325)
145 2j7t_A Serine/threonine-protei 100.0 1.5E-45 5.1E-50  378.9  23.7  262  111-410    17-283 (302)
146 3p86_A Serine/threonine-protei 100.0 4.1E-45 1.4E-49  379.6  26.8  256  112-408    36-299 (309)
147 3com_A Serine/threonine-protei 100.0 2.8E-45 9.7E-50  379.3  24.5  256  112-409    28-285 (314)
148 4euu_A Serine/threonine-protei 100.0 1.6E-45 5.5E-50  383.0  22.1  276  112-405     8-305 (319)
149 2vwi_A Serine/threonine-protei 100.0 5.5E-46 1.9E-50  381.6  18.3  271  112-410    14-295 (303)
150 3aln_A Dual specificity mitoge 100.0 1.5E-45 5.2E-50  384.2  21.5  263  112-409    21-292 (327)
151 3qup_A Tyrosine-protein kinase 100.0 2.1E-45 7.1E-50  382.1  21.8  266  112-410    22-306 (323)
152 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-44 4.2E-49  373.0  26.5  254  113-408    22-276 (303)
153 3lb7_A RAF proto-oncogene seri 100.0 1.3E-44 4.6E-49  375.2  25.8  261  111-406    34-297 (307)
154 2psq_A Fibroblast growth facto 100.0 1.1E-44 3.7E-49  386.2  25.1  253  112-403    80-358 (370)
155 2dyl_A Dual specificity mitoge 100.0 1.2E-44   4E-49  374.6  24.1  262  112-410    24-291 (318)
156 3l9p_A Anaplastic lymphoma kin 100.0 4.1E-45 1.4E-49  388.8  20.8  257  112-407    70-343 (367)
157 1zy4_A Serine/threonine-protei 100.0 1.8E-44 6.2E-49  369.4  24.1  262  113-408     6-289 (303)
158 3vhe_A Vascular endothelial gr 100.0 1.1E-44 3.7E-49  381.9  23.0  255  112-403    21-349 (359)
159 3fhr_A MAP kinase-activated pr 100.0 5.1E-45 1.8E-49  383.1  20.3  262  111-410    26-295 (336)
160 3cek_A Dual specificity protei 100.0   3E-44   1E-48  372.1  25.2  261  112-409    27-299 (313)
161 2clq_A Mitogen-activated prote 100.0 1.9E-44 6.6E-49  369.0  23.3  258  114-409    23-285 (295)
162 2pml_X PFPK7, Ser/Thr protein  100.0 4.5E-45 1.5E-49  383.2  18.6  273  112-409    30-329 (348)
163 3s95_A LIMK-1, LIM domain kina 100.0 1.1E-44 3.6E-49  375.0  21.0  259  112-409     9-280 (310)
164 3a99_A Proto-oncogene serine/t 100.0 7.5E-45 2.6E-49  378.9  18.8  250  112-409    42-300 (320)
165 4hcu_A Tyrosine-protein kinase 100.0 3.6E-44 1.2E-48  363.1  22.7  249  112-403     9-260 (269)
166 2izr_A Casein kinase I isoform 100.0 2.8E-44 9.7E-49  375.6  22.4  256  112-402     8-274 (330)
167 1csn_A Casein kinase-1; phosph 100.0 5.3E-44 1.8E-48  366.3  24.0  257  112-402     9-276 (298)
168 3ugc_A Tyrosine-protein kinase 100.0   5E-44 1.7E-48  367.0  23.8  270  112-402     9-284 (295)
169 2ivs_A Proto-oncogene tyrosine 100.0 3.8E-44 1.3E-48  370.1  21.9  253  112-403    22-305 (314)
170 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.9E-44 2.4E-48  360.5  23.3  249  112-403     7-258 (268)
171 3p23_A Serine/threonine-protei 100.0 1.1E-44 3.6E-49  394.4  18.3  258  113-409    24-290 (432)
172 3soc_A Activin receptor type-2 100.0 7.3E-45 2.5E-49  379.3  16.0  273  112-402    23-311 (322)
173 3gen_A Tyrosine-protein kinase 100.0 5.9E-44   2E-48  363.9  22.3  249  112-403    23-274 (283)
174 3tt0_A Basic fibroblast growth 100.0 1.7E-43 5.9E-48  378.0  26.8  253  112-403    68-346 (382)
175 3brb_A Proto-oncogene tyrosine 100.0   6E-44   2E-48  369.5  22.2  259  112-403    33-302 (313)
176 2iwi_A Serine/threonine-protei 100.0 2.9E-44 9.9E-49  371.7  19.7  250  112-410    30-291 (312)
177 3poz_A Epidermal growth factor 100.0 5.7E-44   2E-48  373.3  22.0  252  112-403    14-272 (327)
178 1luf_A Muscle-specific tyrosin 100.0 7.8E-44 2.7E-48  372.7  23.0  253  111-402    45-328 (343)
179 1mp8_A Focal adhesion kinase 1 100.0 9.8E-44 3.3E-48  362.6  23.0  251  112-403    14-270 (281)
180 2h34_A Serine/threonine-protei 100.0   2E-43 6.8E-48  366.1  25.1  254  112-402    33-289 (309)
181 1xbb_A Tyrosine-protein kinase 100.0 1.4E-43 4.7E-48  363.3  23.1  253  112-402    15-272 (291)
182 3ll6_A Cyclin G-associated kin 100.0   9E-44 3.1E-48  370.2  22.0  258  113-405    28-304 (337)
183 3og7_A AKAP9-BRAF fusion prote 100.0 2.3E-43 7.9E-48  361.6  24.7  257  111-402    22-281 (289)
184 4f0f_A Serine/threonine-protei 100.0 3.1E-43 1.1E-47  359.4  25.2  249  112-402    18-282 (287)
185 3kfa_A Tyrosine-protein kinase 100.0 1.6E-43 5.6E-48  361.2  22.7  249  112-402    12-264 (288)
186 1t46_A HOMO sapiens V-KIT hard 100.0 2.1E-43 7.2E-48  364.4  23.7  254  112-403    22-301 (313)
187 3kex_A Receptor tyrosine-prote 100.0 5.6E-44 1.9E-48  372.8  19.6  252  112-403    12-270 (325)
188 2qol_A Ephrin receptor; recept 100.0 8.4E-44 2.9E-48  379.8  20.8  253  112-402    44-302 (373)
189 1rjb_A FL cytokine receptor; k 100.0 1.6E-43 5.5E-48  371.2  22.6  256  112-405    44-330 (344)
190 3cbl_A C-FES, proto-oncogene t 100.0 6.5E-44 2.2E-48  380.8  19.8  252  112-402   113-367 (377)
191 3dtc_A Mitogen-activated prote 100.0 3.9E-43 1.3E-47  355.3  24.4  248  112-403     6-267 (271)
192 4e5w_A Tyrosine-protein kinase 100.0 4.5E-43 1.5E-47  360.4  25.2  270  112-402    20-295 (302)
193 1p4o_A Insulin-like growth fac 100.0   2E-43   7E-48  366.6  22.7  253  112-403    24-293 (322)
194 1mqb_A Ephrin type-A receptor  100.0 6.5E-43 2.2E-47  366.5  26.5  255  111-403    42-303 (333)
195 3op5_A Serine/threonine-protei 100.0 9.6E-44 3.3E-48  377.1  20.2  268  112-402    34-322 (364)
196 3kmu_A ILK, integrin-linked ki 100.0   4E-43 1.4E-47  354.0  23.5  249  112-402     9-263 (271)
197 2yfx_A Tyrosine-protein kinase 100.0 1.9E-43 6.6E-48  368.5  21.6  257  112-407    29-302 (327)
198 3uzp_A CKI-delta, CKID, casein 100.0 5.6E-43 1.9E-47  358.3  24.3  258  112-402     8-273 (296)
199 2xir_A Vascular endothelial gr 100.0 3.2E-43 1.1E-47  363.5  22.7  255  112-403    26-304 (316)
200 2rio_A Serine/threonine-protei 100.0 1.3E-43 4.5E-48  385.7  20.7  260  112-408    14-301 (434)
201 4hgt_A Casein kinase I isoform 100.0 1.3E-43 4.5E-48  362.6  19.4  259  111-402     7-273 (296)
202 3q4u_A Activin receptor type-1 100.0 8.1E-44 2.8E-48  365.4  17.7  263  112-402     7-295 (301)
203 3lxl_A Tyrosine-protein kinase 100.0 1.3E-43 4.6E-48  369.8  19.4  270  111-403    21-297 (327)
204 2v62_A Serine/threonine-protei 100.0 1.8E-43 6.3E-48  372.2  20.3  266  112-402    36-321 (345)
205 2pvf_A Fibroblast growth facto 100.0 6.6E-43 2.3E-47  365.9  24.1  253  112-403    34-312 (334)
206 3cc6_A Protein tyrosine kinase 100.0 6.4E-43 2.2E-47  356.2  23.3  251  112-403    11-267 (281)
207 1u59_A Tyrosine-protein kinase 100.0 4.7E-43 1.6E-47  358.6  22.4  255  112-405     8-268 (287)
208 4fvq_A Tyrosine-protein kinase 100.0 2.3E-43 7.8E-48  360.3  19.9  245  112-403     7-269 (289)
209 3lzb_A Epidermal growth factor 100.0 4.1E-43 1.4E-47  367.3  22.3  251  112-402    14-271 (327)
210 3t9t_A Tyrosine-protein kinase 100.0 6.8E-43 2.3E-47  352.4  22.4  249  112-403     7-258 (267)
211 2i1m_A Macrophage colony-stimu 100.0 8.2E-43 2.8E-47  364.1  23.1  253  112-402    45-319 (333)
212 2qkw_B Protein kinase; three-h 100.0 6.1E-44 2.1E-48  371.4  14.0  268  112-405    38-311 (321)
213 1fvr_A Tyrosine-protein kinase 100.0 2.9E-43   1E-47  367.2  18.3  250  112-403    24-294 (327)
214 3f66_A Hepatocyte growth facto 100.0 1.9E-42 6.6E-47  355.3  23.9  253  113-402    25-284 (298)
215 2jii_A Serine/threonine-protei 100.0 3.4E-43 1.2E-47  370.9  18.7  261  112-402    41-329 (352)
216 2wqm_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46  355.6  26.1  253  111-402    30-290 (310)
217 2a19_B Interferon-induced, dou 100.0 5.1E-43 1.7E-47  356.1  19.3  248  113-407    11-272 (284)
218 3pls_A Macrophage-stimulating  100.0 3.3E-42 1.1E-46  352.9  24.9  253  113-402    21-280 (298)
219 1opk_A P150, C-ABL, proto-onco 100.0 6.7E-43 2.3E-47  386.6  20.5  249  112-402   219-471 (495)
220 2buj_A Serine/threonine-protei 100.0 4.6E-43 1.6E-47  363.2  17.8  261  112-403    28-300 (317)
221 4fl3_A Tyrosine-protein kinase 100.0 2.2E-42 7.4E-47  393.5  25.0  250  115-402   370-624 (635)
222 3dzo_A Rhoptry kinase domain;  100.0 2.3E-43   8E-48  381.4  16.0  255  113-409    78-370 (413)
223 1k9a_A Carboxyl-terminal SRC k 100.0 3.2E-42 1.1E-46  376.6  24.5  243  112-402   192-438 (450)
224 1qcf_A Haematopoetic cell kina 100.0 1.7E-42 5.7E-47  379.1  22.2  247  112-402   187-437 (454)
225 1qpc_A LCK kinase; alpha beta  100.0 3.2E-42 1.1E-46  350.3  22.8  247  112-402    12-262 (279)
226 3uim_A Brassinosteroid insensi 100.0 2.4E-43 8.2E-48  367.1  14.3  270  111-409    28-311 (326)
227 4eut_A Serine/threonine-protei 100.0 2.8E-43 9.5E-48  378.3  14.9  274  112-403     8-303 (396)
228 3m2w_A MAP kinase-activated pr 100.0 4.7E-42 1.6E-46  353.8  23.2  242  112-411    16-265 (299)
229 1byg_A CSK, protein (C-termina 100.0 2.7E-42 9.4E-47  351.0  21.2  243  112-402    20-266 (278)
230 1u46_A ACK-1, activated CDC42  100.0 1.7E-42 5.8E-47  353.9  19.0  254  112-402    17-277 (291)
231 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-41 5.5E-46  351.7  26.5  243  112-403     7-257 (307)
232 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.6E-42 5.4E-47  367.7  18.3  246  112-405    64-334 (365)
233 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-42 7.2E-47  359.8  18.6  266  115-402    33-303 (318)
234 2nru_A Interleukin-1 receptor- 100.0 2.7E-42 9.2E-47  355.8  19.1  265  112-403    30-300 (307)
235 3c1x_A Hepatocyte growth facto 100.0 2.6E-42 8.7E-47  368.5  19.3  254  113-403    89-349 (373)
236 3g2f_A Bone morphogenetic prot 100.0 1.6E-42 5.5E-47  362.0  17.3  273  112-402    12-311 (336)
237 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.5E-42 2.2E-46  374.3  22.2  247  112-402   183-433 (452)
238 3sv0_A Casein kinase I-like; t 100.0 7.8E-42 2.7E-46  376.7  22.4  257  112-402     6-271 (483)
239 2ozo_A Tyrosine-protein kinase 100.0 2.3E-41 7.8E-46  383.7  26.3  252  112-402   334-591 (613)
240 2w1i_A JAK2; chromosomal rearr 100.0   2E-41 6.7E-46  353.5  23.1  270  112-402    40-315 (326)
241 3mdy_A Bone morphogenetic prot 100.0   7E-42 2.4E-46  356.7  19.6  262  112-403    36-325 (337)
242 3qa8_A MGC80376 protein; kinas 100.0   6E-43 2.1E-47  396.3  11.2  283  113-410    14-305 (676)
243 2h8h_A Proto-oncogene tyrosine 100.0 1.9E-41 6.4E-46  378.5  20.6  247  112-402   266-516 (535)
244 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-41 4.4E-46  352.3  16.2  258  112-409    32-300 (319)
245 2vuw_A Serine/threonine-protei 100.0 5.6E-43 1.9E-47  366.7   5.9  253  112-407    19-336 (336)
246 1b6c_B TGF-B superfamily recep 100.0 3.9E-41 1.3E-45  352.1  18.8  262  112-403    41-330 (342)
247 2j0j_A Focal adhesion kinase 1 100.0 3.5E-40 1.2E-44  376.6  24.8  250  112-402   389-644 (656)
248 3gxj_A TGF-beta receptor type- 100.0 6.1E-43 2.1E-47  358.9   0.6  260  113-402     3-290 (303)
249 3uqc_A Probable conserved tran 100.0 3.1E-39 1.1E-43  332.0  22.1  227  112-402    30-258 (286)
250 2pzi_A Probable serine/threoni 100.0 1.6E-40 5.5E-45  381.2  13.4  245  112-407    79-325 (681)
251 4azs_A Methyltransferase WBDD; 100.0 3.1E-34 1.1E-38  322.2   3.8  188  119-320   240-437 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 2.1E-28 7.2E-33  273.2   7.1  190  115-321   338-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 9.1E-25 3.1E-29  224.1   9.6  160  113-306    90-274 (282)
254 1zth_A RIO1 serine protein kin  99.9 1.7E-21 5.8E-26  196.9  12.1  139  114-266    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 6.4E-18 2.2E-22  179.7   7.1  135  114-264    96-263 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.3 2.1E-11 7.3E-16  122.0  11.6  137  114-264    15-212 (263)
257 3sg8_A APH(2'')-ID; antibiotic  99.1 9.3E-11 3.2E-15  120.5   7.8  183  119-321    26-287 (304)
258 1nd4_A Aminoglycoside 3'-phosp  99.1 1.1E-10 3.8E-15  115.8   8.1  132  114-264    21-213 (264)
259 3dxp_A Putative acyl-COA dehyd  99.0 1.1E-09 3.7E-14  115.0  10.3  142  117-265    42-248 (359)
260 3r70_A Aminoglycoside phosphot  98.7   3E-08   1E-12  102.6  11.1  131  116-266    40-238 (320)
261 3tdw_A Gentamicin resistance p  98.4 2.7E-06 9.1E-11   87.4  14.1  133  118-265    24-224 (306)
262 4gkh_A Aminoglycoside 3'-phosp  98.3   1E-05 3.5E-10   80.7  14.8  131  120-264    31-222 (272)
263 2olc_A MTR kinase, methylthior  98.2 7.9E-06 2.7E-10   86.7  11.6   77  118-201    35-119 (397)
264 3ovc_A Hygromycin-B 4-O-kinase  98.1 8.4E-06 2.9E-10   85.8  11.5   74  115-201    43-118 (362)
265 2q83_A YTAA protein; 2635576,   98.0 2.1E-05 7.3E-10   80.8  11.5   30  235-264   222-251 (346)
266 3d1u_A Putative fructosamine-3  97.9 5.3E-05 1.8E-09   77.1  10.6   74  116-201    18-94  (288)
267 3ats_A Putative uncharacterize  97.6 3.4E-05 1.2E-09   80.3   4.4   84  116-201    23-117 (357)
268 2pyw_A Uncharacterized protein  97.4 0.00075 2.6E-08   72.0  12.4   31  234-265   231-261 (420)
269 3dxq_A Choline/ethanolamine ki  97.3  0.0015 5.1E-08   66.3  12.2   68  118-201    23-92  (301)
270 2yle_A Protein spire homolog 1  97.0  0.0053 1.8E-07   59.5  11.7   96  202-316    34-131 (229)
271 3jr1_A Putative fructosamine-3  96.9  0.0058   2E-07   62.8  12.4   73  117-201    40-115 (312)
272 1zyl_A Hypothetical protein YI  96.8  0.0059   2E-07   62.3  11.0   76  119-201    32-111 (328)
273 2ppq_A HSK, HK, homoserine kin  96.7  0.0044 1.5E-07   63.1   9.2  144  115-264    24-216 (322)
274 3f7w_A Putative fructosamine-3  96.7    0.01 3.4E-07   59.6  11.8   75  114-200    16-93  (288)
275 1nw1_A Choline kinase (49.2 KD  96.6   0.012 4.2E-07   63.0  12.8   72  117-201    77-156 (429)
276 3csv_A Aminoglycoside phosphot  96.6  0.0044 1.5E-07   63.6   8.4   31  235-265   183-217 (333)
277 3c5i_A Choline kinase; choline  96.4  0.0054 1.8E-07   64.0   7.9   72  118-201    38-118 (369)
278 2qg7_A Ethanolamine kinase PV0  96.3   0.041 1.4E-06   59.5  14.5   72  118-201   113-185 (458)
279 3feg_A Choline/ethanolamine ki  96.3   0.014 4.7E-07   61.6  10.1  135  118-264    55-253 (379)
280 3i1a_A Spectinomycin phosphotr  95.9   0.017 5.9E-07   59.6   8.3   30  236-265   207-236 (339)
281 3f2s_A CK, chetk-alpha, cholin  95.5   0.053 1.8E-06   57.5  10.4   29  236-264   245-279 (401)
282 3mes_A Choline kinase; malaria  95.0   0.082 2.8E-06   56.5  10.2   72  118-201    75-154 (424)
283 3g15_A CK, chetk-alpha, cholin  91.4    0.76 2.6E-05   48.3  10.3   29  237-265   246-280 (401)
284 3cxl_A N-chimerin; SH2, RHO-GA  83.5   0.065 2.2E-06   58.0  -4.2   62  117-181   146-213 (463)
285 4ano_A ESSB; membrane protein,  38.3      14 0.00048   35.4   2.3   68  191-263    62-131 (219)
286 3eps_A Isocitrate dehydrogenas  32.8 1.3E+02  0.0044   32.7   8.8  139  120-264   313-480 (578)
287 3ro3_B Minsc, peptide of prote  29.0      15 0.00053   21.4   0.5   11    6-16      5-15  (22)
288 1cja_A Protein (actin-fragmin   28.0 2.9E+02    0.01   28.0  10.1  140  114-265    70-237 (342)
289 2x6h_A GH13170P, VPS34, phosph  25.0      34  0.0012   38.5   2.8   25  240-264   551-575 (696)
290 1e7u_A Phosphatidylinositol 3-  20.6      98  0.0033   36.2   5.6   25  240-264   804-828 (961)
291 4ann_A ESSB; membrane protein,  20.2      48  0.0016   31.6   2.4   83  170-264    43-127 (215)

No 1  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-68  Score=575.43  Aligned_cols=338  Identities=50%  Similarity=0.887  Sum_probs=296.0

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCC-CccCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPP-SRREF  189 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~-~~~~~  189 (604)
                      ..++|++++.||+|+||+||+|+++.+|+.||||+++.........+.+++|+.+|+.|+|||||++++++... ...+.
T Consensus        52 i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             CCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             CCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            34689999999999999999999999999999999987666666778899999999999999999999998654 23455


Q ss_pred             ccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          190 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .++|||||||+|+|.+++...+.+++.+++.|++||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus       132 ~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~  211 (398)
T 4b99_A          132 KSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS  211 (398)
T ss_dssp             CCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred             CEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence            78999999999999999999899999999999999999999999999999999999999999999999999999865332


Q ss_pred             C-CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 A-PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~-~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      . ......+.++||++|||||++.+. ..|+.++||||||||||||++|++||.+.+..+++..|....|.|+...+..+
T Consensus       212 ~~~~~~~~~~~~GT~~Y~APEv~~~~-~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~  290 (398)
T 4b99_A          212 PAEHQYFMTEYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV  290 (398)
T ss_dssp             ----CCCCCSSCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred             ccccccccccceeChHhcCHHHhcCC-CCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence            2 122234668999999999998763 46799999999999999999999999999999999999999999999888777


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHH
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEF  428 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~  428 (604)
                      .......++..++...+.++...++.+++.++|||.+||.+||.+|||++|+|+||||+.+.+++.+|...+  .+++.+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~~p~~~~--~~~~~~  368 (398)
T 4b99_A          291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAP--PFDFAF  368 (398)
T ss_dssp             ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGGSCCCSS--CCCCHH
T ss_pred             hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCccccCCCC--CCCCcc
Confidence            777777888888888888888888999999999999999999999999999999999999887777765543  567788


Q ss_pred             HHhhhCHHHHHHHHHHHHHhhCh
Q 007428          429 ERRKLAKDDVREMIYREILEYHP  451 (604)
Q Consensus       429 e~~~l~~~~~~~~i~~ei~~~~~  451 (604)
                      +...+..++++++|+.|+.++|.
T Consensus       369 ~~~~~~~~~~k~~i~~ei~~~~~  391 (398)
T 4b99_A          369 DREALTRERIKEAIVAEIEDFHA  391 (398)
T ss_dssp             HHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhcCHHHHHHHHHHHHHHHHH
Confidence            88999999999999999998875


No 2  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=6.2e-62  Score=505.94  Aligned_cols=262  Identities=26%  Similarity=0.455  Sum_probs=224.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++.. ........+.+|+++|+.|+|||||+++++|.     +...
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ-----DDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence            46999999999999999999999999999999996432 12234567899999999999999999999994     4457


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|||||||. |+|.++|...+.+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+......
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence            999999998 5999999999999999999999999999999999999999999999999999999999999998764332


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .. ....+++||+.|||||++.+  ..|+.++||||||||||||++|++||.+.+....+..|...              
T Consensus       187 ~~-~~~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~--------------  249 (311)
T 4aw0_A          187 KQ-ARANSFVGTAQYVSPELLTE--KSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--------------  249 (311)
T ss_dssp             TC-CCBCCCCSCGGGCCHHHHHH--SCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--------------
T ss_pred             Cc-ccccCcccCcccCCHHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Confidence            22 22456799999999999987  78999999999999999999999999988866555444321              


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHH------HhcCcccccCcCCC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEE------ALADPYFHGLANVD  413 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~e------iL~Hp~f~~~~~~~  413 (604)
                                  .  ..+   ...+++.+++||.+||++||.+|||++|      +++||||+++.+..
T Consensus       250 ------------~--~~~---p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~  301 (311)
T 4aw0_A          250 ------------E--YDF---PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN  301 (311)
T ss_dssp             ------------C--CCC---CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             ------------C--CCC---CcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHH
Confidence                        0  011   1347899999999999999999999987      58999999876544


No 3  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=3.7e-61  Score=507.18  Aligned_cols=257  Identities=29%  Similarity=0.508  Sum_probs=220.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++++.||+|+||+||+|+++.+|+.||||+++....  ...+.+.+|+.+|+.|+|||||+++++|..     ...
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~  145 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDE  145 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----CCE
Confidence            3579999999999999999999999999999999964322  234557899999999999999999999943     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|||||||+ |+|.+++.. +.+++.+++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+......
T Consensus       146 ~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             EEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             EEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            999999998 589988865 579999999999999999999999999999999999999999999999999998764333


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .   ..+..+||++|||||++.+  ..|+.++||||||||||||++|++||.+.+..+.+..|....             
T Consensus       225 ~---~~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-------------  286 (346)
T 4fih_A          225 P---RRKSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------------  286 (346)
T ss_dssp             C---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-------------
T ss_pred             C---cccccccCcCcCCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-------------
Confidence            2   2356799999999999987  689999999999999999999999999988766655443211             


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                    + +....+..+++.+++||.+||++||.+|||++|+|+||||+..
T Consensus       287 --------------~-~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          287 --------------P-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             --------------C-CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             --------------C-CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence                          0 1112234678999999999999999999999999999999864


No 4  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=6.8e-61  Score=490.80  Aligned_cols=255  Identities=31%  Similarity=0.530  Sum_probs=204.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||+||+|+++.+|+.||||++++... .......+.+|+.+|+.++|||||++++++..     ..
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-----~~   86 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KD   86 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CC
Confidence            4689999999999999999999999999999999965332 22335678999999999999999999999944     45


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|||||||+|+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+......
T Consensus        87 ~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           87 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999998653322


Q ss_pred             CCcccccccccCccccccccccccCCCC-CccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~-~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                          ..+..+||+.|||||++.+  ..| +.++|||||||+||||++|++||.+.+....+..+...             
T Consensus       167 ----~~~~~~GT~~Y~APE~~~~--~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~-------------  227 (275)
T 3hyh_A          167 ----FLKTSCGSPNYAAPEVISG--KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-------------  227 (275)
T ss_dssp             ------------CTTSCHHHHSS--SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-------------
T ss_pred             ----ccCCeeECcccCChhhhcC--CCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-------------
Confidence                2345799999999999987  454 68999999999999999999999987754444333210             


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                   .  ..+   ...+++.+++||.+||++||.+|||++|+|+||||+.
T Consensus       228 -------------~--~~~---p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          228 -------------V--YTL---PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             -------------C--CCC---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             -------------C--CCC---CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                         0  011   1347899999999999999999999999999999973


No 5  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=4.6e-61  Score=507.19  Aligned_cols=257  Identities=26%  Similarity=0.432  Sum_probs=216.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||+||+|+++.+|+.||||+++...........+.+|+.+|+.|+|||||++++++.     +...
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-----~~~~   97 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-----ENGS   97 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-----ECCE
Confidence            46899999999999999999999999999999999765555566778999999999999999999999994     4456


Q ss_pred             EEEEEeccc-ccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|||||||+ |+|.++|...+  .+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            999999998 69999997543  578999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      .   ....+..+||+.|||||++.+  ..|+.++||||||||||||++|++||.+.+..+.+..+...            
T Consensus       178 ~---~~~~~~~~GT~~YmAPE~l~~--~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------------  240 (350)
T 4b9d_A          178 T---VELARACIGTPYYLSPEICEN--KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG------------  240 (350)
T ss_dssp             H---HHHHHHHHSCCTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------------
T ss_pred             C---cccccccCCCccccCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC------------
Confidence            1   112355789999999999987  78999999999999999999999999998876655544321            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                    ..    ......+++.+.+||.+||++||.+|||++|+|+||||+.
T Consensus       241 --------------~~----~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          241 --------------SF----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             --------------CC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             --------------CC----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence                          00    1122457899999999999999999999999999999974


No 6  
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=5e-60  Score=517.75  Aligned_cols=342  Identities=42%  Similarity=0.740  Sum_probs=283.5

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++++.||+|+||+||+|+++.+|+.||||++..........+++.+|+.+|+.++||||+++++++.........
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            45789999999999999999999999999999999987666667788899999999999999999999999877666677


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||++++|.+++.....+++.+++.|++||+.||.|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus       131 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~  210 (458)
T 3rp9_A          131 ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE  210 (458)
T ss_dssp             CEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred             eEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence            89999999999999999988899999999999999999999999999999999999999999999999999998654222


Q ss_pred             CC------------------------cccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh----------
Q 007428          271 PS------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT----------  316 (604)
Q Consensus       271 ~~------------------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt----------  316 (604)
                      ..                        ....+.++||++|+|||++... ..|+.++||||||||||||++          
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~DiwSlG~il~elltg~~~~~~~~~  289 (458)
T 3rp9_A          211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQ-ENYTEAIDVWSIGCIFAELLNMIKENVAYHA  289 (458)
T ss_dssp             TCCCCCC---------------------------CCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGG
T ss_pred             ccccccccCccccccccccccccccccccccCCcccccccChHHhhCC-CCCCcHhHHHHHHHHHHHHHHhccccccccc
Confidence            11                        0124567899999999986432 579999999999999999999          


Q ss_pred             -CCCCCCCCC--------------------hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCC
Q 007428          317 -GKPLFPGKN--------------------VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNA  375 (604)
Q Consensus       317 -G~~PF~~~~--------------------~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  375 (604)
                       |++||++.+                    ..+++..|.+++|+|..+.+..+.......++..++......+...++.+
T Consensus       290 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (458)
T 3rp9_A          290 DRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPAS  369 (458)
T ss_dssp             GCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTS
T ss_pred             cccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCC
Confidence             889998875                    36889999999999999999999988899999888888888888889999


Q ss_pred             CHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHHHhhhCHHHHHHHHHHHHHhhChhhH
Q 007428          376 DPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFERRKLAKDDVREMIYREILEYHPQML  454 (604)
Q Consensus       376 s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e~~~l~~~~~~~~i~~ei~~~~~~~~  454 (604)
                      ++.+++||.+||.+||.+|||++|+|+||||+++.+...++.......+.+. +...+..++++++++.|+..|+|++.
T Consensus       370 s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~~~~  447 (458)
T 3rp9_A          370 SADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFN-DWMNMDEPQLRYAFVKEIQRYHPEIQ  447 (458)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGGGCCCCSSCCCCSSC-TTSCCCHHHHHHHHHHHHTTTCTTCC
T ss_pred             CHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCccCCCCCCCCCCCcc-ccccCCHHHHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999998877666544322222221 23568899999999999999998643


No 7  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=6.3e-60  Score=487.38  Aligned_cols=259  Identities=26%  Similarity=0.374  Sum_probs=215.8

Q ss_pred             CCe-EEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          113 SRY-QIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y-~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ++| ++.++||+|+||+||+|.++.++..||||++............+.+|+.+|+.|+|||||+++++|.... .....
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~  103 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKC  103 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcE
Confidence            455 7888999999999999999999999999999765555556778999999999999999999999985422 22356


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCCeeeCC-CCcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANA-DCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKp~NILl~~-~~~vKL~DFGla~~~~  267 (604)
                      +|||||||+ |+|.+++...+.+++..++.|+.||+.||.|||++|  ||||||||+||||+. +|.+||+|||+|+...
T Consensus       104 ~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            899999998 699999999899999999999999999999999998  999999999999985 7999999999998642


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ..     .....+||+.|||||++.+   .|+.++||||||||||||+||++||.+.+...++.....-           
T Consensus       184 ~~-----~~~~~~GTp~YmAPE~~~~---~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-----------  244 (290)
T 3fpq_A          184 AS-----FAKAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-----------  244 (290)
T ss_dssp             TT-----SBEESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-----------
T ss_pred             CC-----ccCCcccCccccCHHHcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-----------
Confidence            21     2356799999999999864   6999999999999999999999999876544333211100           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                    ...|..   .....++.+.+||.+||++||.+|||++|+|+||||++
T Consensus       245 --------------~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          245 --------------GVKPAS---FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             --------------TCCCGG---GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             --------------CCCCCC---CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                          001111   11346789999999999999999999999999999974


No 8  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=8.2e-60  Score=508.79  Aligned_cols=257  Identities=29%  Similarity=0.492  Sum_probs=221.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++++.||+|+||+||+|+++.+|+.||||++....  ....+.+.+|+.+|+.|+|||||+++++|..     ...
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~-----~~~  222 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV-----GDE  222 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT--CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCCCceEEEEEE-----CCE
Confidence            457999999999999999999999999999999996432  2234567899999999999999999999954     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|||||||+ |+|.+++.. +.+++..++.|++||+.||.|||++|||||||||+||||+.+|.+||+|||+|+......
T Consensus       223 ~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             EEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            999999998 589888864 579999999999999999999999999999999999999999999999999998764433


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .   ..+..+||++|||||++.+  ..|+.++||||||||||||++|++||.+.+....+..|....             
T Consensus       302 ~---~~~~~~GTp~YmAPEvl~~--~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-------------  363 (423)
T 4fie_A          302 P---RRKSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-------------  363 (423)
T ss_dssp             C---CBCCCEECTTTCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-------------
T ss_pred             c---cccccccCcCcCCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-------------
Confidence            2   2356799999999999987  789999999999999999999999999988766655443210             


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                     .+....+..+++.+++||.+||++||.+|||++|+|+||||+..
T Consensus       364 ---------------~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          364 ---------------PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             ---------------CCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             ---------------CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence                           01112345689999999999999999999999999999999864


No 9  
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=5.3e-59  Score=506.72  Aligned_cols=342  Identities=37%  Similarity=0.701  Sum_probs=293.1

Q ss_pred             cCCCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          109 YGEASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       109 ~~~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      +...++|++++.||+|+||.||+|.+..+|+.||||+++..........++.+|+.+|+.++||||+++++++.......
T Consensus        22 ~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  101 (432)
T 3n9x_A           22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK  101 (432)
T ss_dssp             CCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             ceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence            34567999999999999999999999999999999999877666677888999999999999999999999998766555


Q ss_pred             cccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          189 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       189 ~~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ...+|+|||||+++|.+++.....+++.+++.+++||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       102 ~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          102 FDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             CCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             CCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            67899999999999999999888899999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCCc-------------------ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-----------CC
Q 007428          269 DAPSA-------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-----------GK  318 (604)
Q Consensus       269 ~~~~~-------------------~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-----------G~  318 (604)
                      .....                   ...+.++||++|+|||++... ..|+.++||||||||||||++           |.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~  260 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQ-ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRF  260 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcC-CCCCcccccchHHHHHHHHHhccccccccccccc
Confidence            32110                   124678999999999986442 679999999999999999998           66


Q ss_pred             CCCCCCC-----------------hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHH
Q 007428          319 PLFPGKN-----------------VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALH  381 (604)
Q Consensus       319 ~PF~~~~-----------------~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~d  381 (604)
                      ++|++.+                 ..+++..|.+++|+|..+.+..+.......++..++...+.++...++.+++.+++
T Consensus       261 p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  340 (432)
T 3n9x_A          261 PLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGIN  340 (432)
T ss_dssp             CSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHH
T ss_pred             ccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHH
Confidence            7777765                 47899999999999999999999888899999888888888887888899999999


Q ss_pred             HHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHHH-hhhCHHHHHHHHHHHHHhhChhh
Q 007428          382 LLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFER-RKLAKDDVREMIYREILEYHPQM  453 (604)
Q Consensus       382 LI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e~-~~l~~~~~~~~i~~ei~~~~~~~  453 (604)
                      ||.+||.+||.+|||++|+|+||||+++.+...++.....  +.+.|+. ..+..+++++++++|+..++|+.
T Consensus       341 Ll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~  411 (432)
T 3n9x_A          341 LLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKK--IILPFDDWMVLSETQLRYIFLKEVQSFHPEL  411 (432)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC---CCC--CCCSSCTTCCCCHHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHhcCCcccCCCHHHHhcChhhhhccCcccCcCCCCC--CCCChhhcccCCHHHHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999887776644322  2222333 57889999999999999999874


No 10 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.6e-60  Score=494.58  Aligned_cols=258  Identities=28%  Similarity=0.435  Sum_probs=213.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC---CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT---HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~---~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|++++.||+|+||+||+|++.   .+++.||||++++......+..++.+|+.+|+.|+|||||++++++.     +
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~   97 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ-----T   97 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-----E
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----E
Confidence            357999999999999999999874   46889999999754333333456789999999999999999999994     3


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...+|||||||+ |+|.+++.+.+.+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus        98 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A           98 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            456999999998 6999999999999999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....   .....+||+.|||||++.+  ..|+.++||||||||||||+||++||.+.+..+.+..|...           
T Consensus       178 ~~~~---~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~-----------  241 (304)
T 3ubd_A          178 DHEK---KAYSFCGTVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA-----------  241 (304)
T ss_dssp             ---C---CCCSCCCCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred             CCCc---cccccccCcccCCHHHhcc--CCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC-----------
Confidence            3222   2356799999999999987  78999999999999999999999999998876655544321           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-----HHHHhcCcccccCc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-----AEEALADPYFHGLA  410 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-----a~eiL~Hp~f~~~~  410 (604)
                                     ..  .   ....+++.+.+||.+||++||.+|||     ++|+++||||+++.
T Consensus       242 ---------------~~--~---~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          242 ---------------KL--G---MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             ---------------CC--C---CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             ---------------CC--C---CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence                           00  1   11347899999999999999999998     58999999999764


No 11 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=4.6e-59  Score=489.61  Aligned_cols=258  Identities=27%  Similarity=0.371  Sum_probs=214.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ...|++.++||+|+||+||+|+++.+|+.||||+++....       ..+|+.+|+.|+|||||++++++.     +...
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~-----~~~~  124 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVR-----EGPW  124 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEE-----ETTE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEE-----ECCE
Confidence            3569999999999999999999999999999999964221       247999999999999999999984     4456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC-cEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~  269 (604)
                      +|||||||+ |+|.++|...+.+++..++.|+.||+.||.|||++|||||||||+||||+.+| ++||+|||+|+....+
T Consensus       125 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            999999998 69999999989999999999999999999999999999999999999999998 6999999999876443


Q ss_pred             CCCc--ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          270 APSA--IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       270 ~~~~--~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....  ......+||+.|||||++.+  ..|+.++||||||||||||++|++||.+.+....+..|..            
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~------------  270 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMG--KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS------------  270 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH------------
T ss_pred             CcccceecCCccccCccccCHHHHCC--CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc------------
Confidence            2211  11234689999999999987  7899999999999999999999999988764333332221            


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHH-------------hcCcccccCcC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEA-------------LADPYFHGLAN  411 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~ei-------------L~Hp~f~~~~~  411 (604)
                                      .+.++....+.+++.+.+||.+||++||.+|||+.|+             |+|||+..+..
T Consensus       271 ----------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          271 ----------------EPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             ----------------SCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             ----------------CCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence                            0112223346789999999999999999999999997             67999987643


No 12 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-57  Score=485.18  Aligned_cols=331  Identities=41%  Similarity=0.770  Sum_probs=281.2

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-ccCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-RREF  189 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-~~~~  189 (604)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.... ....
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            457899999999999999999999999999999999766555566778999999999999999999999987643 2334


Q ss_pred             ccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          190 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      ..+|+|||||+++|.+++.. ..+++..++.+++||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       103 ~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  181 (367)
T 1cm8_A          103 TDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE  181 (367)
T ss_dssp             CCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             ceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc
Confidence            56899999999899999876 57999999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                            .+.++||++|+|||++.+. ..|+.++||||||||+|||++|++||.+.+..+++..+...+|+|+.+.+..+.
T Consensus       182 ------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~  254 (367)
T 1cm8_A          182 ------MTGYVVTRWYRAPEVILNW-MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQ  254 (367)
T ss_dssp             ------CCSSCSCGGGCCTHHHHTT-TCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCS
T ss_pred             ------cCcCcCCCCcCCHHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhh
Confidence                  3457899999999998752 578999999999999999999999999999999999999999999999999988


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHH
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFE  429 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e  429 (604)
                      ......++..++......+...++.+++.+.+||.+||.+||.+|||++|+|+||||+.+.+...++...   .+++.++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~---~~~~~~~  331 (367)
T 1cm8_A          255 SDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQ---KYDDSFD  331 (367)
T ss_dssp             CHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CCC---CCCCC--
T ss_pred             hHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCccCCCCC---CCCCChh
Confidence            8888888888887777788888899999999999999999999999999999999999988877666554   4667778


Q ss_pred             HhhhCHHHHHHHHHHHHHhhChh
Q 007428          430 RRKLAKDDVREMIYREILEYHPQ  452 (604)
Q Consensus       430 ~~~l~~~~~~~~i~~ei~~~~~~  452 (604)
                      ......++++++++.|++.++|.
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~~~  354 (367)
T 1cm8_A          332 DVDRTLDEWKRVTYKEVLSFKPP  354 (367)
T ss_dssp             ---CCHHHHHHHHHHHHHTCCC-
T ss_pred             hhcCCHHHHHHHHHHHHHHhccc
Confidence            88889999999999999999986


No 13 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=6e-58  Score=487.34  Aligned_cols=285  Identities=26%  Similarity=0.433  Sum_probs=220.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC---CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT---HTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~---~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~  187 (604)
                      .++|++.+.||+|+||+||+|+++   .+++.||||++...    ....++.+|+++|+.+ .|||||+++++|.     
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~-----   90 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFR-----   90 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEE-----
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEE-----
Confidence            468999999999999999999875   46889999998642    2345688999999998 5999999999984     


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC-CcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~-~~vKL~DFGla~~  265 (604)
                      ...++|||||||+ ++|.+++   +.+++.+++.|++||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+.
T Consensus        91 ~~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           91 KNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             ETTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             ECCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            4457999999998 6899888   359999999999999999999999999999999999999877 7999999999976


Q ss_pred             ccCCCCC-------------------------cccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCC
Q 007428          266 SFNDAPS-------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPL  320 (604)
Q Consensus       266 ~~~~~~~-------------------------~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~P  320 (604)
                      .......                         ....+..+||++|||||++.+. ..|+.++||||+|||+|||++|++|
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKC-PNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCC-CCCCCccchhhhHHHHHHHHHCCCC
Confidence            4322110                         1123456899999999998762 4689999999999999999999988


Q ss_pred             C-CCCChHHHHHHHHhhcCCCChhHHHHHhh--------------HHHHHHhhhcccCC---------CCCCCCCCCCCC
Q 007428          321 F-PGKNVVHQLDLMTDLLGTPSTESISRIRN--------------EKARRYLGSMRKKQ---------PVPFSHKFPNAD  376 (604)
Q Consensus       321 F-~~~~~~~~l~~i~~~lg~p~~~~i~~~~~--------------~~~~~~l~~~~~~~---------~~~~~~~~~~~s  376 (604)
                      | .+.+..+++..|..++|++..........              ......+..+....         .......+..++
T Consensus       247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is  326 (361)
T 4f9c_A          247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP  326 (361)
T ss_dssp             SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred             CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence            8 56778899999999998754332221100              00000000000000         011123456789


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          377 PLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       377 ~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                      ++++|||.+||++||++|||++|+|+||||+++
T Consensus       327 ~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          327 DEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            999999999999999999999999999999875


No 14 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2e-57  Score=486.46  Aligned_cols=336  Identities=40%  Similarity=0.738  Sum_probs=265.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.+. ||||+++++++...   ...
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~~~   84 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---NDR   84 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---TSS
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---CCC
Confidence            36899999999999999999999999999999999876666677888999999999997 99999999998643   234


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+|||||+++|..++.. ..+++..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus        85 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           85 DVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             CEEEEEECCSEEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EEEEEecccCcCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            6899999999999999876 579999999999999999999999999999999999999999999999999998653211


Q ss_pred             ------------------CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 007428          271 ------------------PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDL  332 (604)
Q Consensus       271 ------------------~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~  332 (604)
                                        ......+.++||++|+|||++.+. ..|+.++||||||||+|||++|++||++.+..+++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~  242 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS-TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER  242 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCC-CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence                              111224567999999999998752 5789999999999999999999999999999999999


Q ss_pred             HHhhcCCCChhHHHHHhhHHHHHHhhhcccCC---CCCCCCCCC-------------CCCHHHHHHHHhhcCCCCCCCCC
Q 007428          333 MTDLLGTPSTESISRIRNEKARRYLGSMRKKQ---PVPFSHKFP-------------NADPLALHLLERLLAFDPKDRPT  396 (604)
Q Consensus       333 i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-------------~~s~~~~dLI~~~L~~DP~~Rpt  396 (604)
                      +...+|.|..+.+..+.......++..+....   ...+...++             .+++.+++||.+||++||.+|||
T Consensus       243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t  322 (388)
T 3oz6_A          243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS  322 (388)
T ss_dssp             HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence            99999999998877655444444443332221   222223332             67899999999999999999999


Q ss_pred             HHHHhcCcccccCcCCCCCCCCCCCccchhHHH-HhhhCHHHHHHHHHHHHHhhChhhH
Q 007428          397 AEEALADPYFHGLANVDREPSTQPISKLEFEFE-RRKLAKDDVREMIYREILEYHPQML  454 (604)
Q Consensus       397 a~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e-~~~l~~~~~~~~i~~ei~~~~~~~~  454 (604)
                      ++|+|+||||+.+.++..++......  .+.++ ......+++++++|.|+.+++++..
T Consensus       323 ~~e~l~Hp~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (388)
T 3oz6_A          323 ANDALKHPFVSIFHNPNEEPNCDHII--TIPINDNVKHSIDDYRNLVYSEISRRKRELI  379 (388)
T ss_dssp             HHHHTTSTTTTTTCCGGGCCCCSSCC--CCC------CCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHhCCHHHHHhcCCccCCCCCCCC--CCCccccccCCHHHHHHHHHHHHHHhhhhhh
Confidence            99999999999988877776654433  33343 3567889999999999998887643


No 15 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=1.8e-57  Score=484.57  Aligned_cols=333  Identities=44%  Similarity=0.821  Sum_probs=277.3

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-ccCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-RREF  189 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-~~~~  189 (604)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++.... ....
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            357899999999999999999999999999999999766556667788999999999999999999999986542 2345


Q ss_pred             ccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          190 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      ..+|+||||++++|.+++.. ..+++..++.+++||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       107 ~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~  185 (367)
T 2fst_X          107 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE  185 (367)
T ss_dssp             CCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred             CeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence            67899999999999988875 57999999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                            .+.++||++|+|||++.+. ..|+.++||||||||+|||++|++||++.+..+++..+.+.+|.|..+.+..+.
T Consensus       186 ------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  258 (367)
T 2fst_X          186 ------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  258 (367)
T ss_dssp             -----------CCCTTCCHHHHTTC-CSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred             ------CCCcCcCcCccChHHHcCC-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence                  3457899999999998752 578999999999999999999999999999999999999999999999999988


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHH
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFE  429 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e  429 (604)
                      ......++..+.......+...++.+++.+.+||.+||.+||.+|||+.|+|+||||+.+.++..++...+   +++.++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~~~---~~~~~~  335 (367)
T 2fst_X          259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADP---YDQSLE  335 (367)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGGCCCCCC---CCGGGS
T ss_pred             hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCCCCCCCC---CCcchh
Confidence            88888888888777777777778889999999999999999999999999999999999887776665443   556667


Q ss_pred             HhhhCHHHHHHHHHHHHHhhChhhH
Q 007428          430 RRKLAKDDVREMIYREILEYHPQML  454 (604)
Q Consensus       430 ~~~l~~~~~~~~i~~ei~~~~~~~~  454 (604)
                      ...+..+++++++|.|+..++|..+
T Consensus       336 ~~~~~~~~~~~~~~~e~~~~~~~~~  360 (367)
T 2fst_X          336 SRDLLIDEWKSLTYDEVISFVPPPL  360 (367)
T ss_dssp             SCCCCHHHHHHHHHHHHHHCCCCC-
T ss_pred             hccCCHHHHHHHHHHHHHHhccCcc
Confidence            7788999999999999999998743


No 16 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.2e-56  Score=492.85  Aligned_cols=330  Identities=36%  Similarity=0.677  Sum_probs=262.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc-cCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR-REFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~-~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++..... ....
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            578999999999999999999999999999999998766566677889999999999999999999999976532 3456


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|||||||+++|.+.+..  .+++..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus       141 ~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  218 (464)
T 3ttj_A          141 DVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  218 (464)
T ss_dssp             EEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC
T ss_pred             eEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc
Confidence            7999999999999888854  49999999999999999999999999999999999999999999999999998653322


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                          ..+.++||++|+|||++.+  ..|+.++||||||||||||++|++||.+.+..+++..|.+.+|.|..+.+..+. 
T Consensus       219 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~-  291 (464)
T 3ttj_A          219 ----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-  291 (464)
T ss_dssp             ----CC----CCCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC-
T ss_pred             ----ccCCCcccccccCHHHHcC--CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc-
Confidence                2356799999999999987  689999999999999999999999999999999999999999999998887764 


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCC------------CHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNA------------DPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPST  418 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~------------s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~  418 (604)
                      .....++...+......+...++..            ++.+++||.+||.+||.+|||++|+|+||||+.+.++..+...
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~~~~~~  371 (464)
T 3ttj_A          292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAP  371 (464)
T ss_dssp             HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHHHHSCC
T ss_pred             hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccCcccccCC
Confidence            3445555544433333333333322            5679999999999999999999999999999987654332211


Q ss_pred             CCCccchhHHHHhhhCHHHHHHHHHHHHHhhCh
Q 007428          419 QPISKLEFEFERRKLAKDDVREMIYREILEYHP  451 (604)
Q Consensus       419 ~~i~~~~~~~e~~~l~~~~~~~~i~~ei~~~~~  451 (604)
                       +...+++.++......+++++++++|+..+..
T Consensus       372 -~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~  403 (464)
T 3ttj_A          372 -PPQIYDKQLDEREHTIEEWKELIYKEVMNSEE  403 (464)
T ss_dssp             -C-----------CCCHHHHHHHHHHHHHC---
T ss_pred             -CCccCCcchhhccCCHHHHHHHHHHHHHHhhh
Confidence             22234556677788899999999999886554


No 17 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=1.1e-56  Score=465.88  Aligned_cols=264  Identities=25%  Similarity=0.412  Sum_probs=199.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc------
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR------  186 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~------  186 (604)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|+.|+|||||+++++|.....      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            35999999999999999999999999999999996432 23345678999999999999999999999864332      


Q ss_pred             -cCcccEEEEEeccc-ccHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecc
Q 007428          187 -REFKDIYVVFELME-SDLHQVIKANDDL---TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG  261 (604)
Q Consensus       187 -~~~~~l~lV~E~~~-g~L~~~i~~~~~l---~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFG  261 (604)
                       ....++|||||||. |+|.+++.....+   .+..++.|+.||++||+|||++|||||||||+|||++.++.+||+|||
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence             12345899999998 6899999876544   446688999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCc---------ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHH
Q 007428          262 LARVSFNDAPSA---------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDL  332 (604)
Q Consensus       262 la~~~~~~~~~~---------~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~  332 (604)
                      +|+.........         ...+..+||+.|||||++.+  ..|+.++||||||||||||++   ||.+.  .+....
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~--~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~  236 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRT  236 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTT--CCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHH
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcC--CCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHH
Confidence            998764332211         12345689999999999987  789999999999999999996   77542  222222


Q ss_pred             HHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          333 MTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       333 i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                      +..+.....+                           ..++..++.+.+||.+||++||.+|||+.|+|+||||+++..
T Consensus       237 ~~~~~~~~~p---------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          237 LTDVRNLKFP---------------------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             HHHHHTTCCC---------------------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             HHHHhcCCCC---------------------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence            2221111110                           111234567899999999999999999999999999987643


No 18 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=5.6e-55  Score=463.49  Aligned_cols=337  Identities=48%  Similarity=0.839  Sum_probs=286.7

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++++.||+|+||.||+|.+..++..||||++... ........+.+|+.+|+.++||||+++++++.........
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            356899999999999999999999999999999999642 2334557789999999999999999999999776655567


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus       104 ~~~iv~e~~~~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          104 DVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             CEEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             eEEEEEcccCcCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence            7999999999999998875 469999999999999999999999999999999999999999999999999998754433


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .........+||++|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...+|.|..+.+..+..
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  261 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN  261 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTB-CSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred             CccccccccccccCCCCCHHhcCC-CCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            333334567899999999987552 5689999999999999999999999999999999999999999999999888877


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHHH
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFER  430 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e~  430 (604)
                      .....+..........++...++.+++.+.+||.+||++||.+|||+.|+|+||||+.......++....  .+.+.++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~--~~~~~~~~  339 (364)
T 3qyz_A          262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEA--PFKFDMEL  339 (364)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGGGSCCCSS--CCCCC---
T ss_pred             hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCcccccCCCC--cCCccccc
Confidence            7777777777777777777777889999999999999999999999999999999998766554443332  34455566


Q ss_pred             hhhCHHHHHHHHHHHHHhhChh
Q 007428          431 RKLAKDDVREMIYREILEYHPQ  452 (604)
Q Consensus       431 ~~l~~~~~~~~i~~ei~~~~~~  452 (604)
                      ..+.++++++++++|+..++|.
T Consensus       340 ~~~~~~~~~~~~~~e~~~~~~~  361 (364)
T 3qyz_A          340 DDLPKEKLKELIFEETARFQPG  361 (364)
T ss_dssp             --CCHHHHHHHHHHHTGGGCC-
T ss_pred             ccCCHHHHHHHHHHHHHHhhhh
Confidence            7788999999999999888875


No 19 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=9.7e-55  Score=489.10  Aligned_cols=262  Identities=26%  Similarity=0.406  Sum_probs=225.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||+||+|+++.+|+.||||++...  ...+...+.+|+.+|+.|+|||||+++++|..     ...
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~~~  228 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFED-----DNE  228 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-----SSE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCE
Confidence            36899999999999999999999999999999999642  34456778999999999999999999999944     456


Q ss_pred             EEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC--CcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~--~~vKL~DFGla~~~~  267 (604)
                      +|||||||. |+|+++|.. .+.|++.+++.|++||+.||.|||++||+||||||+|||++.+  +.+||+|||+|+...
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            999999998 599998864 4679999999999999999999999999999999999999865  899999999998764


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...    .....+||++|||||++.+  ..|+.++||||||||||||++|.+||.+.+..+.+..|......+       
T Consensus       309 ~~~----~~~~~~GT~~y~APEv~~~--~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~-------  375 (573)
T 3uto_A          309 PKQ----SVKVTTGTAEFAAPEVAEG--KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM-------  375 (573)
T ss_dssp             TTS----EEEEECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC-------
T ss_pred             CCC----ceeeeEECccccCHHHhCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCC-------
Confidence            322    2356799999999999987  789999999999999999999999999988776666554321111       


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVD  413 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~  413 (604)
                                          ....++.+++.+++||.+||++||.+|||+.|+|+||||+....+.
T Consensus       376 --------------------~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          376 --------------------DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             --------------------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred             --------------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence                                1223456899999999999999999999999999999998765543


No 20 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=1.6e-54  Score=450.31  Aligned_cols=257  Identities=24%  Similarity=0.295  Sum_probs=205.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.++||+|+||+||+|+..   ..||||+++.........+.+.+|+.+|++|+|||||++++++..      ..
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~  105 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN  105 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence            468999999999999999999754   359999997655555667789999999999999999999998743      24


Q ss_pred             EEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|||||||+ |+|.+++... ..+++..+..|+.||+.||.|||+++||||||||+||||+.++.+||+|||+|+.....
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred             EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence            799999998 6999999764 57999999999999999999999999999999999999999999999999999865432


Q ss_pred             CCCcccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ... ...+..+||+.|||||++.+. ...|+.++|||||||+||||+||+.||.+.+....+..+...            
T Consensus       186 ~~~-~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~------------  252 (307)
T 3omv_A          186 SGS-QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR------------  252 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT------------
T ss_pred             Ccc-eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhc------------
Confidence            222 123557899999999998642 246999999999999999999999999887654443322110            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                   ...+..+....+++++.+.+||.+||+.||.+|||+.|++++
T Consensus       253 -------------~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          253 -------------GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             -------------TCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             -------------CCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                         011112233445788999999999999999999999987654


No 21 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1e-54  Score=489.92  Aligned_cols=261  Identities=26%  Similarity=0.369  Sum_probs=212.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHH---HHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILR---EIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~---Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      .++|+++++||+|+||+||+|+++.+|+.||||++++... .......+.+   ++.+++.++|||||+++++|.+    
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~----  263 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT----  263 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE----
Confidence            4689999999999999999999999999999999964211 1111223333   4566677789999999999954    


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                       ...+|||||||. |+|.++|...+.|++..++.|+.||+.||.|||++|||||||||+||||+.+|++||+|||+|+..
T Consensus       264 -~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          264 -PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             -SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             -CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence             456999999998 699999999999999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESIS  346 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~  346 (604)
                      ....     ....+||+.|||||++.+. ..|+.++||||||||||||++|++||.+.+..+.......           
T Consensus       343 ~~~~-----~~t~~GTp~YmAPEvl~~~-~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~-----------  405 (689)
T 3v5w_A          343 SKKK-----PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----------  405 (689)
T ss_dssp             SSCC-----CCSCCSCGGGCCHHHHSTT-CCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH-----------
T ss_pred             CCCC-----CCCccCCcCccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-----------
Confidence            4332     2456999999999998641 5799999999999999999999999986542221111100           


Q ss_pred             HHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-----HHHHhcCcccccCcC
Q 007428          347 RIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-----AEEALADPYFHGLAN  411 (604)
Q Consensus       347 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-----a~eiL~Hp~f~~~~~  411 (604)
                               .+    .. +.   .....+++.+++||.+||++||.+|++     ++||++||||+++.+
T Consensus       406 ---------i~----~~-~~---~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          406 ---------TL----TM-AV---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             ---------HH----HC-CC---CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             ---------hc----CC-CC---CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCH
Confidence                     00    00 11   112457899999999999999999998     799999999998764


No 22 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.1e-54  Score=450.68  Aligned_cols=257  Identities=23%  Similarity=0.344  Sum_probs=209.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-----CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-----HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ..+|.+.+.||+|+||+||+|++.     .++..||||+++..  .....+.+.+|+.+|++|+|||||++++++...  
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~--   87 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG--   87 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC--
Confidence            357999999999999999999865     36889999999753  334567799999999999999999999999543  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC
Q 007428          187 REFKDIYVVFELME-SDLHQVIKAN-------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD  252 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~-------------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~  252 (604)
                         ..+|||||||+ |+|.++|...             ..+++..+..|+.||+.||.|||+++||||||||+|||++.+
T Consensus        88 ---~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~  164 (299)
T 4asz_A           88 ---DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN  164 (299)
T ss_dssp             ---SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             ---CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC
Confidence               45899999998 7999999764             369999999999999999999999999999999999999999


Q ss_pred             CcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHH
Q 007428          253 CKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLD  331 (604)
Q Consensus       253 ~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~  331 (604)
                      +.+||+|||+|+........ ......+||+.|||||++.+  ..|+.++|||||||+||||+| |+.||.+.+..+.+.
T Consensus       165 ~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~--~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~  241 (299)
T 4asz_A          165 LLVKIGDFGMSRDVYSTDYY-RVGGHTMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE  241 (299)
T ss_dssp             GCEEECCCSCHHHHTGGGCE-EETTTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             CcEEECCcccceecCCCCce-eecCceecChhhcCHHHHcC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            99999999999865332221 11234579999999999987  789999999999999999998 899999877655444


Q ss_pred             HHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          332 LMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       332 ~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      .+...                         ...+     ....+++.+.+||.+||+.||++|||+.|+  |+|++.+.
T Consensus       242 ~i~~~-------------------------~~~~-----~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~~~  288 (299)
T 4asz_A          242 CITQG-------------------------RVLQ-----RPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLA  288 (299)
T ss_dssp             HHHHT-------------------------CCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHHHH
T ss_pred             HHHcC-------------------------CCCC-----CCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHHHH
Confidence            33220                         0011     113578899999999999999999999999  45776543


No 23 
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=3e-53  Score=451.84  Aligned_cols=329  Identities=41%  Similarity=0.765  Sum_probs=275.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc-cCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR-REFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~-~~~~  190 (604)
                      .++|.+.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++..... ....
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            468999999999999999999999999999999997655555567788999999999999999999999865432 1233


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||+.++|.+++.  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... 
T Consensus       121 ~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~-  197 (371)
T 4exu_A          121 DFYLVMPFMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-  197 (371)
T ss_dssp             CCEEEEECCCEEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-------
T ss_pred             eEEEEEccccccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC-
Confidence            469999999999988874  45999999999999999999999999999999999999999999999999999754322 


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                           ....+||++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....|.+..+.+..+..
T Consensus       198 -----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  271 (371)
T 4exu_A          198 -----MTGYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND  271 (371)
T ss_dssp             -------CTTCCCTTSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred             -----cCCcccCccccCHHHhcCC-CCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhh
Confidence                 2456899999999998652 5789999999999999999999999999999999999999999999988887776


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHHH
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFER  430 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e~  430 (604)
                      .....+...+.......+...++.+++.+.+||.+||+.||.+|||+.|+|+||||+.+..+..+...+  ..+....+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~--~~~~~~~~~  349 (371)
T 4exu_A          272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ--QPFDDSLEH  349 (371)
T ss_dssp             HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGGCCCCS--SCCCCTTSS
T ss_pred             hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcccccccc--cCcCcchhh
Confidence            666666666665555555556678899999999999999999999999999999999876654443322  122333456


Q ss_pred             hhhCHHHHHHHHHHHHHhhCh
Q 007428          431 RKLAKDDVREMIYREILEYHP  451 (604)
Q Consensus       431 ~~l~~~~~~~~i~~ei~~~~~  451 (604)
                      .++..+++++.|++|+.+++|
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~  370 (371)
T 4exu_A          350 EKLTVDEWKQHIYKEIVNFSP  370 (371)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCC
T ss_pred             cccchHHHHHHHHHHHHhccc
Confidence            678899999999999999876


No 24 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=1.4e-53  Score=448.08  Aligned_cols=251  Identities=23%  Similarity=0.341  Sum_probs=201.7

Q ss_pred             CCeEEeeEeeecCceEEEEEEEC-----CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDT-----HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      .+|.+.++||+|+||+||+|+..     .++..||||+++..  .....+.+.+|+.+|++|+|||||++++++...   
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~---  115 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQHQHIVRFFGVCTEG---  115 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC---
Confidence            46899999999999999999864     46889999999752  344567899999999999999999999999543   


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC
Q 007428          188 EFKDIYVVFELME-SDLHQVIKAN---------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA  251 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~---------------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~  251 (604)
                        ..+|||||||+ |+|.+++...               .++++.++..|+.||+.||.|||+++||||||||+||||+.
T Consensus       116 --~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~  193 (329)
T 4aoj_A          116 --RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ  193 (329)
T ss_dssp             --SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred             --CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence              45899999998 6999998753               35899999999999999999999999999999999999999


Q ss_pred             CCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHH
Q 007428          252 DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQL  330 (604)
Q Consensus       252 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l  330 (604)
                      ++.+||+|||+|+........ ...+..+||+.|||||++.+  ..|+.++|||||||+||||+| |+.||.+.+..+.+
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~-~~~~~~~gt~~ymAPE~~~~--~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~  270 (329)
T 4aoj_A          194 GLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILY--RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI  270 (329)
T ss_dssp             TTEEEECCCC-----------------CCCCGGGCCHHHHTT--CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred             CCcEEEcccccceeccCCCcc-eecCcccccccccChhhhcC--CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence            999999999999865433221 12245689999999999987  789999999999999999999 89999987765544


Q ss_pred             HHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          331 DLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       331 ~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..+...                         ...+     ....+++.+.+||.+||+.||++|||+.|++++
T Consensus       271 ~~i~~g-------------------------~~~~-----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          271 DCITQG-------------------------RELE-----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHT-------------------------CCCC-----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHHHcC-------------------------CCCC-----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            433221                         0011     113578999999999999999999999999874


No 25 
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=1.1e-52  Score=442.02  Aligned_cols=334  Identities=43%  Similarity=0.793  Sum_probs=271.0

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++... ........+.+|+.+|+.++||||+++++++.........
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence            356899999999999999999999999999999999642 3334556788999999999999999999998766555567


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||+.++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        88 ~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (353)
T 2b9h_A           88 EVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA  166 (353)
T ss_dssp             CEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             eEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence            8999999999999998876 579999999999999999999999999999999999999999999999999998654322


Q ss_pred             CCc-------ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          271 PSA-------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       271 ~~~-------~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ...       ......+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...+|.|...
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  245 (353)
T 2b9h_A          167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD  245 (353)
T ss_dssp             -------------CCCCCCGGGCCHHHHHSC-CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred             ccccCccccccchhhccccccccCCeeeccC-CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence            111       012346899999999987542 578999999999999999999999999999999999999998887643


Q ss_pred             -HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCc
Q 007428          344 -SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPIS  422 (604)
Q Consensus       344 -~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~  422 (604)
                       ....+.......++..+......++...++.+++.+.+||.+||..||.+|||+.|+|+||||+.+.....++..++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~~~~~  325 (353)
T 2b9h_A          246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIP  325 (353)
T ss_dssp             TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSSCCCCCCC
T ss_pred             ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCcccccccCCCC
Confidence             2222333344445444444444444455677899999999999999999999999999999999887766666555554


Q ss_pred             cc--hhHHHHhhhCHHHHHHHHHHHHH
Q 007428          423 KL--EFEFERRKLAKDDVREMIYREIL  447 (604)
Q Consensus       423 ~~--~~~~e~~~l~~~~~~~~i~~ei~  447 (604)
                      ..  ++......++.++++++++.||.
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (353)
T 2b9h_A          326 PSFFEFDHYKEALTTKDLKKLIWNEIF  352 (353)
T ss_dssp             GGGGGGGCCSSCCCHHHHHHHHHHHHT
T ss_pred             cceeeecchhhcCCHHHHHHHHHHHhh
Confidence            43  33334566889999999999985


No 26 
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=1.2e-52  Score=443.15  Aligned_cols=329  Identities=41%  Similarity=0.762  Sum_probs=277.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc-cCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR-REFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~-~~~~  190 (604)
                      .++|.+.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++..... ....
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            468999999999999999999999999999999997655555556788999999999999999999999865432 2234


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||+.++|.+++.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... 
T Consensus       103 ~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-  179 (353)
T 3coi_A          103 DFYLVMPFMQTDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-  179 (353)
T ss_dssp             CCEEEEECCSEEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred             eEEEEeccccCCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC-
Confidence            579999999999888774  35999999999999999999999999999999999999999999999999999754321 


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                           ....+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+++..+...+|.+..+.+..+..
T Consensus       180 -----~~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  253 (353)
T 3coi_A          180 -----MTGYVVTRWYRAPEVILSW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND  253 (353)
T ss_dssp             ---------CCSBCCSCHHHHSCC-SCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred             -----ccccccCcCcCCHHHHhCc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence                 2456899999999988652 5789999999999999999999999999999999999999999999988888777


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCCCccchhHHHH
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQPISKLEFEFER  430 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~i~~~~~~~e~  430 (604)
                      .....++..+.......+...++.+++.+.+||.+||..||.+|||++++|+||||+.+..+..+....  ..+....+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~~~~~~--~~~~~~~~~  331 (353)
T 3coi_A          254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ--QPFDDSLEH  331 (353)
T ss_dssp             HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGGCCCCS--SCCCCTTTT
T ss_pred             HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCccccccCC--CCCccchhh
Confidence            777777777666666666777788999999999999999999999999999999999876654443322  234445566


Q ss_pred             hhhCHHHHHHHHHHHHHhhCh
Q 007428          431 RKLAKDDVREMIYREILEYHP  451 (604)
Q Consensus       431 ~~l~~~~~~~~i~~ei~~~~~  451 (604)
                      ..++.+++++.|++|+.++.|
T Consensus       332 ~~~~~~~~~~~~~~~~~~~~~  352 (353)
T 3coi_A          332 EKLTVDEWKQHIYKEIVNFSP  352 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHTCCC
T ss_pred             ccCCHHHHHHHHHHHHHhhcc
Confidence            778899999999999988765


No 27 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=2.1e-53  Score=442.74  Aligned_cols=253  Identities=21%  Similarity=0.343  Sum_probs=207.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-----CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-----HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      .+++++++.||+|+||+||+|...     .+++.||||+++... .....+.+.+|+.+|++|+|||||++++++...  
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--  101 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD--  101 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC--
Confidence            356899999999999999999853     467899999997532 223456789999999999999999999999543  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee
Q 007428          187 REFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA  249 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~----------------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl  249 (604)
                         ..+|||||||+ |+|.++|...                ..+++..+..|+.||++||.|||+++||||||||+||||
T Consensus       102 ---~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A          102 ---QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             ---SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             ---CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence               45899999998 6999999653                358999999999999999999999999999999999999


Q ss_pred             CCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHH
Q 007428          250 NADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVH  328 (604)
Q Consensus       250 ~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~  328 (604)
                      ++++.+||+|||+|+........ ...+..+||+.|||||++.+  ..|+.++|||||||+||||+| |.+||.+.+..+
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~--~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~  255 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADYY-KLLGNSLLPIRWMAPEAIMY--GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD  255 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGCB-CSSSSSCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred             CCCCCEEECCcccceeccCCCce-eEecccccCCcccCHHHHhC--CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            99999999999999865433221 12345689999999999987  789999999999999999998 899999887655


Q ss_pred             HHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          329 QLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       329 ~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      .+..+...                         ...+     ....+++.+.+|+.+||+.||.+|||+.||+++
T Consensus       256 ~~~~i~~~-------------------------~~~~-----~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          256 VVEMIRNR-------------------------QVLP-----CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHTT-------------------------CCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcC-------------------------CCCC-----CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            44433210                         0111     123578899999999999999999999999875


No 28 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=8.1e-53  Score=448.49  Aligned_cols=329  Identities=36%  Similarity=0.669  Sum_probs=252.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-ccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-RREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-~~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++||||+++++++.... .....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46899999999999999999999999999999999765555556678899999999999999999999986543 23345


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+|||||+++|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       104 ~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~  181 (371)
T 2xrw_A          104 DVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  181 (371)
T ss_dssp             EEEEEEECCSEEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred             ceEEEEEcCCCCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence            789999999999999886  459999999999999999999999999999999999999999999999999997643221


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                          .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|+.||.+.+...++..+...+|.|..+.+..+..
T Consensus       182 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  255 (371)
T 2xrw_A          182 ----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP  255 (371)
T ss_dssp             ------------CTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred             ----ccCCceecCCccCHHHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence                2345689999999999987  6799999999999999999999999999999999999999999998887765533


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCC-----C-------CCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFP-----N-------ADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPST  418 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~-----~-------~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~  418 (604)
                      . ...++...+......+...++     .       .++.+++||.+||.+||.+|||++|+|+||||+.+.++......
T Consensus       256 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~  334 (371)
T 2xrw_A          256 T-VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAP  334 (371)
T ss_dssp             H-HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCHHHHTCC
T ss_pred             H-HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCccccCCC
Confidence            2 223332222111111111111     1       15678999999999999999999999999999876543211111


Q ss_pred             CCCccchhHHHHhhhCHHHHHHHHHHHHHhhC
Q 007428          419 QPISKLEFEFERRKLAKDDVREMIYREILEYH  450 (604)
Q Consensus       419 ~~i~~~~~~~e~~~l~~~~~~~~i~~ei~~~~  450 (604)
                      .| .......+.+....++++++|+.++..+.
T Consensus       335 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (371)
T 2xrw_A          335 PP-KIPDKQLDEREHTIEEWKELIYKEVMDLE  365 (371)
T ss_dssp             CC-CCCTTTTCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             CC-CCCChhhccccCcHHHHHHHHHHHHHHHh
Confidence            11 11122234556678899999999987654


No 29 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=4.2e-52  Score=432.23  Aligned_cols=290  Identities=40%  Similarity=0.678  Sum_probs=235.0

Q ss_pred             CCCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          110 GEASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       110 ~~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      +..++|++++.||+|+||.||+|.+. +|+.||||++............+.+|+.+|+.++||||+++++++..     .
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~   91 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-----E   91 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-----S
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-----C
Confidence            34678999999999999999999985 59999999997544444445678899999999999999999999853     3


Q ss_pred             ccEEEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||+++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        92 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           92 RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             SCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             CEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            5689999999999999887654 599999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   ..+..+||+.|+|||++.+. ..|+.++|||||||++|+|++|++||.+....+.+..+...++.+....+...
T Consensus       172 ~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          172 PVR---SYTHEVVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV  247 (311)
T ss_dssp             CCC------CCCCCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGG
T ss_pred             Ccc---cccCCcccCCcCCHHHhcCC-CCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhh
Confidence            222   13456899999999998652 56899999999999999999999999999999999999999998887665543


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      ........ .........++....+.+++.+.+||.+||++||.+|||++|+|+||||+++.
T Consensus       248 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          248 QELPLWKQ-RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             TTSHHHHS-CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             hccchhhh-cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            32111100 01111112223334466789999999999999999999999999999998763


No 30 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.5e-52  Score=444.10  Aligned_cols=255  Identities=25%  Similarity=0.406  Sum_probs=208.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCC-----CcEEEEEEeccccCChhHHHHHHHHHHHHHHcCC-CCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHT-----GERVAIKKINDVFEHVSDATRILREIKLLRLLRH-PDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~-----g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~H-pnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||+++... .....+.+.+|+.+|+++.| ||||+++++|... 
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~-  140 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP-  140 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec-
Confidence            46899999999999999999987654     4689999997532 23456778999999999975 9999999998543 


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCee
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL  248 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~----------------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NIL  248 (604)
                         ...+|||||||+ |+|.++|+..                ..+++.++..|+.||++||.|||+++||||||||+|||
T Consensus       141 ---~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          141 ---GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             ---TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ---CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence               235899999998 7999999753                34899999999999999999999999999999999999


Q ss_pred             eCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChH
Q 007428          249 ANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVV  327 (604)
Q Consensus       249 l~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~  327 (604)
                      ++.++.+||+|||+|+....+... ...+..+||+.|||||++.+  ..|+.++|||||||+||||+| |++||++.+..
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~--~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~  294 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  294 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             eCCCCCEEECcchhhhhcccCCCc-eeeccccccccccCHHHHhc--CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999876443322 22345689999999999987  789999999999999999998 99999886543


Q ss_pred             HHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          328 HQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       328 ~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..+..+..                      ...  ..+     ....+++.+.+||.+||+.||.+|||+.|+++|
T Consensus       295 ~~~~~~i~----------------------~g~--~~~-----~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          295 EEFCRRLK----------------------EGT--RMR-----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHHH----------------------HTC--CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHH----------------------cCC--CCC-----CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            32221110                      000  111     113468899999999999999999999999987


No 31 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=7.9e-52  Score=424.84  Aligned_cols=287  Identities=37%  Similarity=0.609  Sum_probs=235.4

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++.     ....+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-----eCCEE
Confidence            5899999999999999999999999999999999765555555677889999999999999999999984     34569


Q ss_pred             EEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCC
Q 007428          193 YVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAP  271 (604)
Q Consensus       193 ~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  271 (604)
                      |+|||||+++|.+.+.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  156 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred             EEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence            99999999988877765 56899999999999999999999999999999999999999999999999999986532222


Q ss_pred             CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCC-CCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          272 SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPL-FPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       272 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~P-F~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                         .....+||+.|+|||++.+. ..++.++|||||||++|+|++|..| |.+.+..+++..+...++.+..+.+.....
T Consensus       157 ---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (292)
T 3o0g_A          157 ---CYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             ---CCCSCCSCGGGCCHHHHTTC-SCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred             ---cccCCccccCCcChHHHcCC-CCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence               13456899999999998762 4489999999999999999987655 788888889999999999888765543321


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      .  ..+................+.+++.+.+||.+||+.||.+|||++|+|+||||+++.
T Consensus       233 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          233 L--PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             S--TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             c--ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            0  000000000011123344567899999999999999999999999999999998764


No 32 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1e-51  Score=423.57  Aligned_cols=284  Identities=38%  Similarity=0.657  Sum_probs=231.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||.||+|.+ .+|+.||||++............+.+|+.+|+.++||||+++++++..     ...+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-----KKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC-----SSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc-----CCeE
Confidence            5899999999999999999998 689999999996543333334667899999999999999999999854     3468


Q ss_pred             EEEEecccccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCC
Q 007428          193 YVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAP  271 (604)
Q Consensus       193 ~lV~E~~~g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  271 (604)
                      |+||||+.++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  155 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR  155 (288)
T ss_dssp             EEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred             EEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence            999999999999998764 6799999999999999999999999999999999999999999999999999976532221


Q ss_pred             CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhH
Q 007428          272 SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNE  351 (604)
Q Consensus       272 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~  351 (604)
                         .....+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...++.+....+..+.. 
T Consensus       156 ---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  230 (288)
T 1ob3_A          156 ---KYTHEIVTLWYRAPDVLMGS-KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE-  230 (288)
T ss_dssp             ---------CCCTTCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG-
T ss_pred             ---ccccccccccccCchheeCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhc-
Confidence               12445899999999998652 4689999999999999999999999999999889988888888876654433211 


Q ss_pred             HHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          352 KARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       352 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                       ...+...+....+.++......+++.+.+||.+||+.||.+|||++|+|+||||++
T Consensus       231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          231 -LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             -STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             -ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence             01111122223344455566778999999999999999999999999999999975


No 33 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=4.6e-51  Score=428.62  Aligned_cols=258  Identities=27%  Similarity=0.500  Sum_probs=222.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++..     ...
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~~   88 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-----EKT   88 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCE
Confidence            468999999999999999999999999999999997655555667789999999999999999999999843     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred             EEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence            999999997 6999999888899999999999999999999999999999999999999999999999999997654322


Q ss_pred             CCcccccccccCccccccccccccCCCC-CccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~-~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                          .....+||++|+|||++.+  ..+ +.++|||||||++|+|++|+.||.+.+.......+...             
T Consensus       169 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-------------  229 (328)
T 3fe3_A          169 ----KLDAFCGAPPYAAPELFQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-------------  229 (328)
T ss_dssp             ----GGGTTSSSGGGCCHHHHHT--CCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------------
T ss_pred             ----ccccccCCcceeCcccccC--CCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence                2356789999999999877  454 57999999999999999999999988765444333210             


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                   ....+     ..+++.+.+||.+||.+||.+|||++|+|+||||+....
T Consensus       230 -------------~~~~p-----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          230 -------------KYRIP-----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             -------------CCCCC-----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             -------------CCCCC-----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence                         11111     236889999999999999999999999999999987654


No 34 
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=5.9e-51  Score=431.07  Aligned_cols=330  Identities=37%  Similarity=0.673  Sum_probs=260.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC---------ChhHHHHHHHHHHHHHHcCCCCeeEEeeeec
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE---------HVSDATRILREIKLLRLLRHPDIVEIKHIML  182 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~---------~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~  182 (604)
                      .++|++.+.||+|+||.||+|.+.. |..||||++.....         .......+.+|+.+|+.++||||+++++++.
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             ccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            5789999999999999999998864 99999999864222         1223477899999999999999999999986


Q ss_pred             CCCccCcccEEEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecc
Q 007428          183 PPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG  261 (604)
Q Consensus       183 ~~~~~~~~~l~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFG  261 (604)
                      .........+|+||||++++|.+.+.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  179 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN  179 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTT
T ss_pred             eccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecC
Confidence            55444556799999999999999887654 79999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPS  341 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~  341 (604)
                      ++........    ....+||++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+....+..+....+.|.
T Consensus       180 ~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  254 (362)
T 3pg1_A          180 LAREDTADAN----KTHYVTHRWYRAPELVMQF-KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK  254 (362)
T ss_dssp             C-------------------CGGGCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccccccc----cceecccceecCcHHhcCC-CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            9975433222    2456899999999988652 5689999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhHHHHHHhhhcccC-CCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCCCCCCC
Q 007428          342 TESISRIRNEKARRYLGSMRKK-QPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDREPSTQP  420 (604)
Q Consensus       342 ~~~i~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~~~~~~  420 (604)
                      .+.+..........++...... ....+....+..++.+.+||.+||+.||.+|||+.|+|+||||+.+..+....... 
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~-  333 (362)
T 3pg1_A          255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTEGL-  333 (362)
T ss_dssp             HHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGTTTC-
T ss_pred             hHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCcccccccc-
Confidence            8877766655555554433222 22233444567789999999999999999999999999999999876543222111 


Q ss_pred             CccchhHHHHhhhCHHHHHHHHHHHHHhhC
Q 007428          421 ISKLEFEFERRKLAKDDVREMIYREILEYH  450 (604)
Q Consensus       421 i~~~~~~~e~~~l~~~~~~~~i~~ei~~~~  450 (604)
                        ...+.++.......++++.++.|+.++.
T Consensus       334 --~~~~~~~~~~~~~~~~~~~~~~e~~~~~  361 (362)
T 3pg1_A          334 --SERFHFDESVTDVYDMHKIFTAEVERFN  361 (362)
T ss_dssp             --CCCCCCCTTCCCHHHHHHHHHHHHHHHC
T ss_pred             --ccccChhhhhhhHHHHHHHHHHHHHHhc
Confidence              1123344566678889999999988775


No 35 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=1.9e-51  Score=425.27  Aligned_cols=288  Identities=35%  Similarity=0.592  Sum_probs=231.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC---ChhHHHHHHHHHHHHHHcC---CCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE---HVSDATRILREIKLLRLLR---HPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~---~~~~~~~~~~Ei~iL~~l~---HpnIv~l~~~~~~~~  185 (604)
                      .++|++++.||+|+||.||+|++..+|+.||||++.....   .......+.+|+.+++.++   ||||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            4689999999999999999999999999999999863221   1112245667877777664   999999999986654


Q ss_pred             ccCcccEEEEEecccccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccc
Q 007428          186 RREFKDIYVVFELMESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA  263 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~g~L~~~i~~~~~--l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla  263 (604)
                      ......+|+||||++++|.+++.....  +++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a  167 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA  167 (308)
T ss_dssp             SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCT
T ss_pred             CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccc
Confidence            344446899999999999999987654  999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      +.......    ....+||+.|+|||++.+  ..|+.++|||||||++|+|++|++||.+.+..+++..+...++.+...
T Consensus       168 ~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  241 (308)
T 3g33_A          168 RIYSYQMA----LTPVVVTLWYRAPEVLLQ--STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED  241 (308)
T ss_dssp             TTSTTCCC----SGGGGCCCSSCCHHHHHT--SCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             cccCCCcc----cCCccccccccCchHHcC--CCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            86533222    345689999999999877  679999999999999999999999999999999999999988887765


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                      .+.......    ...+....+.++....+.+++.+.+||.+||++||.+|||+.|+|+||||+..
T Consensus       242 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          242 DWPRDVSLP----RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             TSCSSCSSC----GGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             hccchhhcc----ccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence            443211000    01111222223333456788999999999999999999999999999999863


No 36 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1e-50  Score=419.64  Aligned_cols=288  Identities=36%  Similarity=0.663  Sum_probs=229.4

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++.     ....+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~   77 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRRL   77 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCeE
Confidence            5899999999999999999999999999999998765444445667889999999999999999999984     34568


Q ss_pred             EEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCC
Q 007428          193 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAP  271 (604)
Q Consensus       193 ~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  271 (604)
                      |+|||||++ +|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  157 (311)
T 4agu_A           78 HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD  157 (311)
T ss_dssp             EEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             EEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence            999999996 5677777777899999999999999999999999999999999999999999999999999986532221


Q ss_pred             CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhH
Q 007428          272 SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNE  351 (604)
Q Consensus       272 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~  351 (604)
                         .....+||+.|+|||++.+. ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++.............
T Consensus       158 ---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (311)
T 4agu_A          158 ---YYDDEVATRWYRSPELLVGD-TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTN  233 (311)
T ss_dssp             -----------GGGCCHHHHHTC-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTC
T ss_pred             ---ccCCCcCCccccChHHHhcC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccc
Confidence               13456899999999998652 57899999999999999999999999999999999998888888766543322111


Q ss_pred             HHHHHhhhcccCCC---CCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCC
Q 007428          352 KARRYLGSMRKKQP---VPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANV  412 (604)
Q Consensus       352 ~~~~~l~~~~~~~~---~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~  412 (604)
                         .+........+   .+....++.+++.+.+||.+||..||.+|||++|+|+||||+++.+.
T Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          234 ---QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             ---GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             ---cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCH
Confidence               11111111111   11122346788999999999999999999999999999999987654


No 37 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=3.5e-51  Score=426.14  Aligned_cols=290  Identities=34%  Similarity=0.612  Sum_probs=219.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++... .......+.+|+.+|+.++||||+++++++..     ...
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~   77 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHT-----ENK   77 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-----TTE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-----CCe
Confidence            458999999999999999999999999999999986432 22234567899999999999999999999854     356


Q ss_pred             EEEEEecccccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          192 IYVVFELMESDLHQVIKAN------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~~------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      +|+|||||+++|.+++...      ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        78 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  157 (317)
T 2pmi_A           78 LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARA  157 (317)
T ss_dssp             EEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred             EEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence            8999999999999988754      3589999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......   .....+||+.|+|||++.+. ..|+.++|||||||++|||++|++||.+.+..+++..+.+.+|.+....+
T Consensus       158 ~~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  233 (317)
T 2pmi_A          158 FGIPVN---TFSSEVVTLWYRAPDVLMGS-RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW  233 (317)
T ss_dssp             TTSCCC---CCCCCCSCCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTC
T ss_pred             cCCCcc---cCCCCcccccccCchHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHh
Confidence            533221   12456899999999998652 46899999999999999999999999999999999999999998876554


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCC-----CCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPF-----SHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVD  413 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~  413 (604)
                      ..+...  ..+...+....+..+     ......+++.+.+||.+||+.||.+|||+.|+|+||||+.+....
T Consensus       234 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  304 (317)
T 2pmi_A          234 PSVTKL--PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA  304 (317)
T ss_dssp             GGGGGC--TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred             hhhhhh--hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence            432210  000000100001000     011235788999999999999999999999999999999876543


No 38 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1e-50  Score=424.83  Aligned_cols=288  Identities=36%  Similarity=0.585  Sum_probs=223.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+++.||||+++...........+.+|+.+|+.++||||+++++++.     ....
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~  107 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-----HNHR  107 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-----ETTE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-----cCCE
Confidence            46899999999999999999999999999999999754433344566789999999999999999999984     3456


Q ss_pred             EEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC-----CCCcEEEeeccccccc
Q 007428          192 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-----ADCKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~-----~~~~vKL~DFGla~~~  266 (604)
                      +|+|||||+++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||+++..
T Consensus       108 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          108 LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             EEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            99999999999999999988999999999999999999999999999999999999994     4556999999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESIS  346 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~  346 (604)
                      .....   .....+||+.|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+++..+...++.|....+.
T Consensus       188 ~~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          188 GIPIR---QFTHEIITLWYRPPEILLGS-RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             C--------------CCTTCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             CCccc---ccCCCcCCccccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence            32221   13456789999999998762 458999999999999999999999999999999999998888887765543


Q ss_pred             HHhhHHHHHHhhhcccCCCCCCCCCC-CCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          347 RIRNEKARRYLGSMRKKQPVPFSHKF-PNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       347 ~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      .....  ..+...........+...+ ..+++.+.+||.+||++||.+|||++|+|+||||++..
T Consensus       264 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          264 GVTAL--PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             TGGGS--TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhhh--hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence            32110  0000000000000000000 11678899999999999999999999999999998764


No 39 
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.4e-50  Score=435.12  Aligned_cols=288  Identities=36%  Similarity=0.666  Sum_probs=234.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc-cCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR-REFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~-~~~~  190 (604)
                      ..+|++.+.||+|+||+||+|.+..++. ||+|++.....      ...+|+.+|+.++||||+++++++..... ....
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~  111 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV  111 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence            3579999999999999999999987766 88888753221      12379999999999999999999865432 3344


Q ss_pred             cEEEEEecccccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC-CCCcEEEeecccccc
Q 007428          191 DIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-ADCKLKICDFGLARV  265 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~----~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~-~~~~vKL~DFGla~~  265 (604)
                      .+|+|||||.+++...+.    ....+++..++.|++||+.||.|||++||+||||||+|||++ .++.+||+|||+|+.
T Consensus       112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            588999999988766654    356899999999999999999999999999999999999999 799999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......    ...++||++|+|||++.+. ..|+.++||||||||+|||++|++||.+.+..+++..+.+.+|+|..+.+
T Consensus       192 ~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~  266 (394)
T 4e7w_A          192 LIAGEP----NVSYICSRYYRAPELIFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI  266 (394)
T ss_dssp             CCTTCC----CCSSCSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             ccCCCC----CcccccCcCccCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            543332    2456899999999998652 46899999999999999999999999999999999999999999998877


Q ss_pred             HHHhhHHHHHHh-hhcccCCCCCCCCCC-CCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCCC
Q 007428          346 SRIRNEKARRYL-GSMRKKQPVPFSHKF-PNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDRE  415 (604)
Q Consensus       346 ~~~~~~~~~~~l-~~~~~~~~~~~~~~~-~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~~  415 (604)
                      ......    +. ..++...+.++...+ +.+++.+.+||.+||++||.+|||+.|+|+||||+.+.+....
T Consensus       267 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~  334 (394)
T 4e7w_A          267 KTMNPN----YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEAR  334 (394)
T ss_dssp             HHHCGG----GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSCCC
T ss_pred             HhhChh----hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccccc
Confidence            654321    11 111122222333223 3488999999999999999999999999999999988765443


No 40 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=5.4e-50  Score=426.18  Aligned_cols=261  Identities=28%  Similarity=0.454  Sum_probs=221.9

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh----hHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV----SDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~----~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ..++|++.+.||+|+||.||+|.++.+|..||||+++......    .....+.+|+.+|+.++||||+++++++..   
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---   86 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---   86 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC---
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe---
Confidence            3467999999999999999999999999999999997533221    135678899999999999999999999843   


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC----cEEEeecc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFG  261 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~----~vKL~DFG  261 (604)
                        ...+|+|||||. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||
T Consensus        87 --~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG  164 (361)
T 2yab_A           87 --RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (361)
T ss_dssp             --SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred             --CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence              456999999996 69999998888999999999999999999999999999999999999998877    79999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPS  341 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~  341 (604)
                      ++........    ....+||+.|+|||++.+  ..|+.++||||||||+|+|++|.+||.+.+....+..+........
T Consensus       165 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~  238 (361)
T 2yab_A          165 LAHEIEDGVE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD  238 (361)
T ss_dssp             SCEECCTTCC----CCCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCC
T ss_pred             CceEcCCCCc----cccCCCCccEECchHHcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence            9986543221    345689999999999976  6899999999999999999999999999887666555543222111


Q ss_pred             hhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          342 TESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       342 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                      .                           ..++.+++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus       239 ~---------------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          239 E---------------------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             H---------------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             c---------------------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            1                           1124578899999999999999999999999999999864


No 41 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.6e-51  Score=427.40  Aligned_cols=289  Identities=35%  Similarity=0.626  Sum_probs=229.8

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||.||+|.+..+++.||||++...... .....+.+|+.+|+.++||||+++++++..     ...+
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~   75 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSL   75 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEEC-----SSCE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEee-----CCEE
Confidence            5799999999999999999999999999999998642211 111234579999999999999999999844     3568


Q ss_pred             EEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCC
Q 007428          193 YVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAP  271 (604)
Q Consensus       193 ~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  271 (604)
                      |+|||||+++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  155 (324)
T 3mtl_A           76 TLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  155 (324)
T ss_dssp             EEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             EEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence            9999999999999987654 599999999999999999999999999999999999999999999999999975432221


Q ss_pred             CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhH
Q 007428          272 SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNE  351 (604)
Q Consensus       272 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~  351 (604)
                         .....+||++|+|||++.+. ..|+.++|||||||++|+|++|++||.+.+..+++..+...+|.|....+......
T Consensus       156 ---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          156 ---TYDNEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             ----------CGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             ---ccccccCcccccChhhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence               23456889999999998652 56899999999999999999999999999999999999999999888766544322


Q ss_pred             HHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCC
Q 007428          352 KARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANV  412 (604)
Q Consensus       352 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~  412 (604)
                      ...... ..............+.+++.+.+||.+||++||.+|||++|+|+||||.++...
T Consensus       232 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          232 EEFKTY-NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             HHHHHT-CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             hhhccc-ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence            111111 111111112223345688999999999999999999999999999999987653


No 42 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=3.6e-50  Score=435.67  Aligned_cols=287  Identities=36%  Similarity=0.643  Sum_probs=232.3

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc-cCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR-REFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~-~~~~~  191 (604)
                      .+|++.+.||+|+||+||+|++..+|+.||||++.....      ...+|+.+|+.|+||||+++++++..... .+..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence            369999999999999999999999999999999864221      22479999999999999999998854321 23445


Q ss_pred             EEEEEecccccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC-CcEEEeeccccccc
Q 007428          192 IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~----~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~-~~vKL~DFGla~~~  266 (604)
                      +++||||+.++|..++.    ....+++..++.|++||+.||.|||++||+||||||+|||++.+ +.+||+|||+++..
T Consensus       128 ~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          128 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            78999999998877664    34679999999999999999999999999999999999999965 57899999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESIS  346 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~  346 (604)
                      .....    ...++||++|+|||++.+. ..|+.++||||||||||||++|++||.+.+..+++..+.+.+|+|..+.+.
T Consensus       208 ~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~  282 (420)
T 1j1b_A          208 VRGEP----NVSYICSRYYRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR  282 (420)
T ss_dssp             CTTCC----CCSCCSCTTSCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred             ccCCC----ceeeeeCCCcCCHHHHcCC-CCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            43322    2456899999999998652 479999999999999999999999999999999999999999999987765


Q ss_pred             HHhhHHHHHHhh-hcccCCCCCCCCCC-CCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCC
Q 007428          347 RIRNEKARRYLG-SMRKKQPVPFSHKF-PNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDR  414 (604)
Q Consensus       347 ~~~~~~~~~~l~-~~~~~~~~~~~~~~-~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~  414 (604)
                      .....    +.. .++.....+|...+ +.+++.+++||.+||.+||.+|||+.|+|+||||..+.+...
T Consensus       283 ~~~~~----~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~  348 (420)
T 1j1b_A          283 EMNPN----YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNV  348 (420)
T ss_dssp             HHCSC----CCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTC
T ss_pred             hhChh----hhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccccc
Confidence            43210    000 00111111111112 357899999999999999999999999999999998876543


No 43 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.3e-49  Score=419.33  Aligned_cols=258  Identities=26%  Similarity=0.459  Sum_probs=218.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|+++.+|+.||||++++... .......+.+|+.+|+.++||||+++++++..     ..
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~-----~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-----SS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-----CC
Confidence            3589999999999999999999999999999999964311 12345678899999999999999999999854     34


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||. ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            6999999998 589999998889999999999999999999999999999999999999999999999999999854322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ..   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+.......+..              
T Consensus       159 ~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~--------------  219 (337)
T 1o6l_A          159 GA---TMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--------------  219 (337)
T ss_dssp             TC---CBCCCEECGGGCCGGGGSS--SCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--------------
T ss_pred             CC---cccccccChhhCChhhhcC--CCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc--------------
Confidence            21   1345789999999999977  6899999999999999999999999988775444333221              


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-----CHHHHhcCcccccCc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-----TAEEALADPYFHGLA  410 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-----ta~eiL~Hp~f~~~~  410 (604)
                                  ..  ..+   ...+++.+.+||.+||+.||.+||     +++|+++||||.++.
T Consensus       220 ------------~~--~~~---p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          220 ------------EE--IRF---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             ------------CC--CCC---CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             ------------CC--CCC---CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence                        00  001   124689999999999999999999     999999999998764


No 44 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=3.6e-50  Score=426.20  Aligned_cols=259  Identities=23%  Similarity=0.407  Sum_probs=215.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++++.||+|+||.||+|+++.+|+.||||++++.. ........+.+|+.+|+.+ .||||+++++++..     .
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-----~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT-----P   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe-----C
Confidence            468999999999999999999999999999999996431 1223456678999999988 69999999999854     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||. ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~  176 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC  176 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence            46999999998 59999999888999999999999999999999999999999999999999999999999999975322


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+..+.+..+...            
T Consensus       177 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------------  239 (353)
T 3txo_A          177 NGV---TTATFCGTPDYIAPEILQE--MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------------  239 (353)
T ss_dssp             ------------CCGGGCCHHHHHH--HHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------
T ss_pred             CCc---cccccCCCcCeEChhhcCC--CCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------------
Confidence            221   2345689999999999977  67999999999999999999999999988876555444321            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCH------HHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTA------EEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta------~eiL~Hp~f~~~~~  411 (604)
                                    ..  .+   ...+++.+.+||.+||++||.+||++      +|+++||||+++.+
T Consensus       240 --------------~~--~~---p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w  289 (353)
T 3txo_A          240 --------------EV--VY---PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW  289 (353)
T ss_dssp             --------------CC--CC---CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCH
T ss_pred             --------------CC--CC---CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCH
Confidence                          00  01   12368899999999999999999999      99999999997643


No 45 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=4.2e-50  Score=429.15  Aligned_cols=286  Identities=33%  Similarity=0.672  Sum_probs=230.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc-----
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR-----  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~-----  186 (604)
                      ..+|++.+.||+|+||+||+|.+..+|+.||||++.....      ...+|+.+|+.++||||+++++++.....     
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~   79 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP   79 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence            4689999999999999999999999999999999864322      12379999999999999999999854322     


Q ss_pred             ----------------------------cCcccEEEEEecccccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHH
Q 007428          187 ----------------------------REFKDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHT  234 (604)
Q Consensus       187 ----------------------------~~~~~l~lV~E~~~g~L~~~i~----~~~~l~~~~~~~i~~qil~aL~yLH~  234 (604)
                                                  ....++|+|||||+++|.+.+.    ....+++..++.++.||+.||.|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  159 (383)
T 3eb0_A           80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS  159 (383)
T ss_dssp             ------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                        2345589999999998777664    35689999999999999999999999


Q ss_pred             CCCccccCCCCCeeeC-CCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHH
Q 007428          235 ANVFHRDLKPKNILAN-ADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE  313 (604)
Q Consensus       235 ~gIiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~e  313 (604)
                      +||+||||||+|||++ .++.+||+|||+|+.......    ...++||+.|+|||++.+. ..|+.++|||||||++||
T Consensus       160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~e  234 (383)
T 3eb0_A          160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP----SVAYICSRFYRAPELMLGA-TEYTPSIDLWSIGCVFGE  234 (383)
T ss_dssp             TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC----CCCCCCCSSCCCHHHHTTC-SSCCTHHHHHHHHHHHHH
T ss_pred             CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC----CcCcccCCCccCHHHhcCC-CCCCcchhhhhHHHHHHH
Confidence            9999999999999998 689999999999986543332    2456899999999988762 458999999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCC-CCCCHHHHHHHHhhcCCCCC
Q 007428          314 MLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKF-PNADPLALHLLERLLAFDPK  392 (604)
Q Consensus       314 LltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~s~~~~dLI~~~L~~DP~  392 (604)
                      |++|++||.+.+..+++..+...+|+|..+.+.........   ..++......+...+ ..+++.+.+||.+||.+||.
T Consensus       235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  311 (383)
T 3eb0_A          235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE---VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD  311 (383)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC-----CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccc---ccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence            99999999999999999999999999998876554321000   000011111111112 24788999999999999999


Q ss_pred             CCCCHHHHhcCcccccCcC
Q 007428          393 DRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       393 ~Rpta~eiL~Hp~f~~~~~  411 (604)
                      +|||+.|+|+||||+.+.+
T Consensus       312 ~R~t~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          312 LRINPYEAMAHPFFDHLRN  330 (383)
T ss_dssp             GSCCHHHHHTSGGGHHHHH
T ss_pred             hCCCHHHHhcCHHHHHHHh
Confidence            9999999999999987643


No 46 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-49  Score=421.67  Aligned_cols=258  Identities=29%  Similarity=0.451  Sum_probs=210.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++...... .....+.+|+.+|+.++||||+++++++..     ...
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----~~~   82 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLET-----ANK   82 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCE
Confidence            46899999999999999999999999999999998653322 234568899999999999999999999843     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        83 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  162 (347)
T 3zgw_A           83 IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK  162 (347)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred             EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence            999999996 6999999888899999999999999999999999999999999999999999999999999987643322


Q ss_pred             CCcccccccccCccccccccccccCCC-CCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~-~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      .  ......+||+.|+|||++.+  .. ++.++||||||||||+|++|..||.+.+.......+...             
T Consensus       163 ~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~-------------  225 (347)
T 3zgw_A          163 D--YHLQTCCGSLAYAAPELIQG--KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG-------------  225 (347)
T ss_dssp             -----------CGGGCCHHHHTT--C---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-------------
T ss_pred             C--ccccccCCccCccCHHHHcC--CCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-------------
Confidence            1  12345689999999999876  44 488999999999999999999999987765544433221             


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                   ...     ....+++.+.+||.+||..||.+|||++|+|+||||....
T Consensus       226 -------------~~~-----~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~  268 (347)
T 3zgw_A          226 -------------KYD-----VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY  268 (347)
T ss_dssp             -------------CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred             -------------CCC-----CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence                         001     1134688999999999999999999999999999997643


No 47 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.9e-49  Score=433.31  Aligned_cols=260  Identities=28%  Similarity=0.468  Sum_probs=220.6

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||.||+|.+..+|+.||+|++........+...+.+|+.+|+.++||||+++++++.     +...+
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~~~~~   85 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS-----EEGHH   85 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE-----CSSEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE-----ECCEE
Confidence            5799999999999999999999999999999999765444456677899999999999999999999984     44568


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC---CCCcEEEeeccccccccC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN---ADCKLKICDFGLARVSFN  268 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~---~~~~vKL~DFGla~~~~~  268 (604)
                      |+|||||. ++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.....
T Consensus        86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            99999998 58999999888999999999999999999999999999999999999998   467899999999976543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|.+||.+.+....+..+...            
T Consensus       166 ~~~---~~~~~~gt~~Y~APE~l~~--~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------------  228 (444)
T 3soa_A          166 EQQ---AWFGFAGTPGYLSPEVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG------------  228 (444)
T ss_dssp             TCC---BCCCSCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------------
T ss_pred             CCc---eeecccCCcccCCHHHhcC--CCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhC------------
Confidence            322   2345789999999999977  68999999999999999999999999887765544433221            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                     ........++.+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       229 ---------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          229 ---------------AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             ---------------CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             ---------------CCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence                           1111223456789999999999999999999999999999999754


No 48 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=7.6e-51  Score=422.69  Aligned_cols=275  Identities=23%  Similarity=0.232  Sum_probs=193.3

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      .+|.+.+.||+|+||+||+|++  +|+.||||+++..   .........|+..+..++|||||++++++.... .....+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~   76 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL   76 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEE
Confidence            4699999999999999999986  6899999999642   111222345666677899999999999986432 122468


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccccCCCCCeeeCCCCcEEEeecccc
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA--------NVFHRDLKPKNILANADCKLKICDFGLA  263 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~--------gIiHrDLKp~NILl~~~~~vKL~DFGla  263 (604)
                      |||||||+ |+|.+++... .++++.+..++.|++.||.|||++        +||||||||+||||+.++++||+|||+|
T Consensus        77 ~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           77 WLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            99999998 6999999754 699999999999999999999987        9999999999999999999999999999


Q ss_pred             ccccCCCCC-cccccccccCccccccccccccC----CCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q 007428          264 RVSFNDAPS-AIFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLG  338 (604)
Q Consensus       264 ~~~~~~~~~-~~~~~~~~gT~~Y~APE~l~~~~----~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg  338 (604)
                      +........ .......+||++|||||++.+..    ..|+.++||||||||||||+||.+||.......... ......
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~-~~~~~~  234 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY-YDLVPS  234 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT-TTTSCS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc-hhcccc
Confidence            876443322 11223468999999999986521    146789999999999999999998876543211000 000000


Q ss_pred             CCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          339 TPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       339 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      .+..+.+        ...+..-...++.+.......+...+.+|+.+||+.||.+|||+.|+++.
T Consensus       235 ~~~~~~~--------~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          235 DPSVEEM--------RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             SCCHHHH--------HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cchHHHH--------HHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            1111111        11111000111111111111223467899999999999999999999873


No 49 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.8e-49  Score=418.16  Aligned_cols=256  Identities=30%  Similarity=0.520  Sum_probs=213.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC-hhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+|+.++||||+++++++...     .
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~   82 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-----T   82 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence            46899999999999999999999999999999998642211 12235688999999999999999999998543     4


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        83 ~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           83 DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            68999999999999999988899999999999999999999999999999999999999999999999999998653322


Q ss_pred             CCcccccccccCccccccccccccCCCC-CccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~-~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                          .....+||+.|+|||++.+  ..+ ++++|||||||++|+|++|+.||.+.......                   
T Consensus       163 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-------------------  217 (336)
T 3h4j_B          163 ----FLKTSCGSPNYAAPEVING--KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-------------------  217 (336)
T ss_dssp             ----TTCCCTTSTTTSCGGGSCC--SGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-------------------
T ss_pred             ----ccccccCCcCcCCHHHHcC--CCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-------------------
Confidence                2345689999999999876  444 78999999999999999999999775421100                   


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                              ..+..    ........+++.+.+||.+||..||.+|||++|+++||||+.-
T Consensus       218 --------~~i~~----~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          218 --------KKVNS----CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             --------CCCCS----SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             --------HHHHc----CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence                    00000    0111123478999999999999999999999999999999753


No 50 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=2.3e-49  Score=417.45  Aligned_cols=297  Identities=35%  Similarity=0.556  Sum_probs=233.1

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc---c
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR---R  187 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~---~  187 (604)
                      ..++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+|+.++||||+++++++.....   .
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            4578999999999999999999999999999999986544433445567899999999999999999999865321   1


Q ss_pred             CcccEEEEEecccccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          188 EFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       188 ~~~~l~lV~E~~~g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      ....+|+|||||+++|...+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        95 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A           95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF  174 (351)
T ss_dssp             --CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccc
Confidence            13568999999999998888754 57999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCC-CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAP-SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~-~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ..... ........+||+.|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+...++..+....+.+..+.+
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  253 (351)
T 3mi9_A          175 SLAKNSQPNRYTNRVVTLWYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW  253 (351)
T ss_dssp             CCCSSSSCCCCCSSCSCGGGCCHHHHTTC-CSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             cccccccccccCCcccccCccCchhhcCC-CCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence            42221 12223556899999999988652 56899999999999999999999999999999999999999888776654


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCC--CCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKF--PNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                      ..+........+...... .......+  ...++.+.+||.+||++||.+|||++|+|+||||...
T Consensus       254 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          254 PNVDNYELYEKLELVKGQ-KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             TTGGGCGGGTSSCCCSSC-CCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             cccccchhhccccccccc-ccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            433211100000000000 00000000  0136789999999999999999999999999999864


No 51 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.1e-49  Score=421.48  Aligned_cols=259  Identities=29%  Similarity=0.482  Sum_probs=219.8

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++.+.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++||||+++++++..     ...+
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~~  103 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESFH  103 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCEE
Confidence            47999999999999999999999999999999997654455566788999999999999999999999843     4568


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC---cEEEeeccccccccC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFGLARVSFN  268 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~  268 (604)
                      |+|||||. ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++   .+||+|||++.....
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            99999998 58999998888899999999999999999999999999999999999998654   599999999976543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ..    .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|.+||.+.+....+..+....           
T Consensus       184 ~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~-----------  246 (362)
T 2bdw_A          184 SE----AWHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA-----------  246 (362)
T ss_dssp             CC----SCCCSCSCTTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------
T ss_pred             Cc----ccccCCCCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-----------
Confidence            22    1345789999999999977  689999999999999999999999998877654443332211           


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                      .......+..+++.+.+||.+||..||.+|||+.++|+||||...
T Consensus       247 ----------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          247 ----------------YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             ----------------CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             ----------------CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence                            001112234578999999999999999999999999999999753


No 52 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=7.6e-49  Score=426.52  Aligned_cols=280  Identities=33%  Similarity=0.567  Sum_probs=230.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc------CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL------RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l------~HpnIv~l~~~~~~~~  185 (604)
                      ..+|++++.||+|+||.||+|.+..+++.||||+++..   ......+.+|+.+|+.+      .|+||+.+++++..  
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~--  170 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--  170 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE--
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc--
Confidence            56899999999999999999999999999999999642   23445677899998887      56799999999843  


Q ss_pred             ccCcccEEEEEecccccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc--EEEeecc
Q 007428          186 RREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--LKICDFG  261 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~--vKL~DFG  261 (604)
                         ...+|+|||||.++|.+++....  .+++..++.|+.||+.||.|||++||+||||||+|||++.++.  +||+|||
T Consensus       171 ---~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG  247 (429)
T 3kvw_A          171 ---RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG  247 (429)
T ss_dssp             ---TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred             ---CCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecc
Confidence               35689999999999999998764  5999999999999999999999999999999999999999987  9999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPS  341 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~  341 (604)
                      ++......      ....+||+.|+|||++.+  ..|+.++||||||||||||++|.+||.+.+..+++..+...+|.|+
T Consensus       248 ~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~  319 (429)
T 3kvw_A          248 SSCYEHQR------VYTYIQSRFYRAPEVILG--ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS  319 (429)
T ss_dssp             TCEETTCC------CCSSCSCGGGCCHHHHHT--BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             cceecCCc------ccccCCCCCccChHHHhC--CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            99754322      234689999999999987  6799999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhHHHHHHhhhcccCC-------------------------CCC----CCCCC-CCCCHHHHHHHHhhcCCCC
Q 007428          342 TESISRIRNEKARRYLGSMRKKQ-------------------------PVP----FSHKF-PNADPLALHLLERLLAFDP  391 (604)
Q Consensus       342 ~~~i~~~~~~~~~~~l~~~~~~~-------------------------~~~----~~~~~-~~~s~~~~dLI~~~L~~DP  391 (604)
                      ...+.......  .++..-....                         ..+    +...+ ...++.+.+||.+||++||
T Consensus       320 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP  397 (429)
T 3kvw_A          320 QKLLDASKRAK--NFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDP  397 (429)
T ss_dssp             HHHHHTBTTHH--HHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSST
T ss_pred             HHHHHhhhhhh--hccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCCh
Confidence            88776543321  2221100000                         000    00001 1347889999999999999


Q ss_pred             CCCCCHHHHhcCcccccC
Q 007428          392 KDRPTAEEALADPYFHGL  409 (604)
Q Consensus       392 ~~Rpta~eiL~Hp~f~~~  409 (604)
                      .+|||++|+|+||||+..
T Consensus       398 ~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          398 AVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             TTSCCHHHHHTSTTTC--
T ss_pred             hhCCCHHHHhCChhhccC
Confidence            999999999999999864


No 53 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=4.5e-49  Score=406.74  Aligned_cols=257  Identities=28%  Similarity=0.462  Sum_probs=216.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+..+|+.||||++.....  .....+.+|+.+|+.++||||+++++++..     ...
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~   91 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE   91 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--cHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCE
Confidence            4689999999999999999999999999999999864322  235668899999999999999999999854     346


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+|||||. ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            899999996 6899888764 69999999999999999999999999999999999999999999999999997654333


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      ..   ....+||+.|+|||++.+  ..|+.++|||||||++|+|++|+.||.+.+....+..+....             
T Consensus       171 ~~---~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-------------  232 (297)
T 3fxz_A          171 SK---RSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG-------------  232 (297)
T ss_dssp             CC---BCCCCSCGGGCCHHHHHC--SCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC-------------
T ss_pred             cc---cCCccCCcCccChhhhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-------------
Confidence            22   345689999999999977  689999999999999999999999998877655444332110             


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                  ...   ......+++.+.+||.+||+.||.+|||++|+|+||||+..
T Consensus       233 ------------~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          233 ------------TPE---LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             ------------SCC---CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             ------------CCC---CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence                        000   01123467889999999999999999999999999999854


No 54 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=4e-49  Score=421.96  Aligned_cols=297  Identities=23%  Similarity=0.310  Sum_probs=218.4

Q ss_pred             CCCCeEEeeEeeec--CceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          111 EASRYQIQEVIGKG--SYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G--~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..++|++++.||+|  +||.||+|++..+|+.||||+++...........+.+|+.+|+.++|||||++++++..     
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----   97 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----   97 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE-----
Confidence            45789999999999  99999999999999999999997655455556778899999999999999999999853     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ...+|+|||||. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B           98 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            356999999998 6899999775  6799999999999999999999999999999999999999999999999999865


Q ss_pred             ccCCCCC----cccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc----
Q 007428          266 SFNDAPS----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLL----  337 (604)
Q Consensus       266 ~~~~~~~----~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~l----  337 (604)
                      .......    .......+||+.|+|||++.+....|+.++||||||||+|||++|++||.+.+....+..+....    
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  257 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL  257 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence            3222111    11112348999999999987643578999999999999999999999998876555443221100    


Q ss_pred             ----CCCChhHHHHHh----hHHHHHHhhh---cccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccc
Q 007428          338 ----GTPSTESISRIR----NEKARRYLGS---MRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYF  406 (604)
Q Consensus       338 ----g~p~~~~i~~~~----~~~~~~~l~~---~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f  406 (604)
                          ..+.........    .......+..   .......+.......+++.+.+||.+||++||.+|||++|+|+||||
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f  337 (389)
T 3gni_B          258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  337 (389)
T ss_dssp             ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred             ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHH
Confidence                000000000000    0000000000   00000011112335678999999999999999999999999999999


Q ss_pred             ccCcCC
Q 007428          407 HGLANV  412 (604)
Q Consensus       407 ~~~~~~  412 (604)
                      +.+...
T Consensus       338 ~~~~~~  343 (389)
T 3gni_B          338 KQIKRR  343 (389)
T ss_dssp             GGC---
T ss_pred             HHHhhc
Confidence            987543


No 55 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.4e-49  Score=410.28  Aligned_cols=258  Identities=29%  Similarity=0.468  Sum_probs=218.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh----hHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV----SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~----~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ++|++.+.||+|+||.||+|.+..+|..||||+++......    .....+.+|+.+|+.++||||+++++++..     
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----   85 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-----   85 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence            57999999999999999999999999999999986532211    235678899999999999999999999844     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC----cEEEeecccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFGLA  263 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~----~vKL~DFGla  263 (604)
                      ...+|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||++
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            356899999997 69999998888899999999999999999999999999999999999999887    8999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      +.......    ....+||+.|+|||++.+  ..|+.++|||||||++|+|++|..||.+.+....+..+......... 
T Consensus       166 ~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~-  238 (326)
T 2y0a_A          166 HKIDFGNE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED-  238 (326)
T ss_dssp             EECCTTSC----CCCCCSCTTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCH-
T ss_pred             eECCCCCc----cccccCCcCcCCceeecC--CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCc-
Confidence            86533221    245689999999999876  68999999999999999999999999988766555544332211111 


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                                ..++.+++.+.+||.+||..||.+|||+.|+|+||||+.
T Consensus       239 --------------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          239 --------------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             --------------------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             --------------------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence                                      112456888999999999999999999999999999975


No 56 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.5e-49  Score=411.19  Aligned_cols=257  Identities=25%  Similarity=0.431  Sum_probs=218.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ......+.+|+.+|+.++||||+++++++.     +...
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~   75 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFE-----SMEE   75 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEe-----cCCE
Confidence            46899999999999999999999999999999998632   244566889999999999999999999984     3456


Q ss_pred             EEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC--CCcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~--~~~vKL~DFGla~~~~  267 (604)
                      +|+|||||. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence            999999998 58999997653 7999999999999999999999999999999999999987  7899999999998754


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...    .....+||+.|+|||++.+  ..++.++|||||||++|+|++|.+||.+.+....+..+......+..     
T Consensus       156 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  224 (321)
T 1tki_A          156 PGD----NFRLLFTAPEYYAPEVHQH--DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE-----  224 (321)
T ss_dssp             TTC----EEEEEESCGGGSCHHHHTT--CEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCH-----
T ss_pred             CCC----ccccccCChhhcCcHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCCh-----
Confidence            322    1345689999999999877  56899999999999999999999999988776655554432222111     


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                            ..++.+++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       225 ----------------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          225 ----------------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             ----------------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             ----------------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence                                  1234578899999999999999999999999999999764


No 57 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=3.3e-49  Score=405.58  Aligned_cols=289  Identities=39%  Similarity=0.637  Sum_probs=229.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++...........+.+|+.+++.++||||+++++++..     ...
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~   76 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENK   76 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CCc
Confidence            368999999999999999999999999999999986533333334667899999999999999999999843     356


Q ss_pred             EEEEEecccccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||+.++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        77 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  156 (299)
T 2r3i_A           77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  156 (299)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             eEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence            8999999999999999765  46899999999999999999999999999999999999999999999999999765322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ..   ......||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+++..+...++.+....+....
T Consensus       157 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (299)
T 2r3i_A          157 VR---TYTHEVVTLWYRAPEILLGA-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT  232 (299)
T ss_dssp             SB---CTTSCBCCCTTCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             cc---ccCcccccccccCcHHhhcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhh
Confidence            21   12445789999999998762 347899999999999999999999999999988888888888877655433221


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                      ..  ..+...+.......+....+.+++.+.+||.+||..||.+|||+.++|+||||+++..
T Consensus       233 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          233 SM--PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  292 (299)
T ss_dssp             GS--TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cC--cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCC
Confidence            00  0000000000001111223457899999999999999999999999999999987643


No 58 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.9e-49  Score=416.64  Aligned_cols=288  Identities=37%  Similarity=0.615  Sum_probs=228.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh---hHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV---SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~---~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++......   .....+.+|+.+|+.++||||+++++++..     
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----   83 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-----   83 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC-----
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee-----
Confidence            468999999999999999999999999999999986422111   112457899999999999999999999854     


Q ss_pred             cccEEEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          189 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       189 ~~~l~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...+|+|||||+++|..++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           84 KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             CCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            34589999999999998887653 69999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....   ..+..+||+.|+|||++.+. ..|+.++|||||||++|+|++|.+||.+.+..+++..+...++.+..+.+..
T Consensus       164 ~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  239 (346)
T 1ua2_A          164 SPNR---AYTHQVVTRWYRAPELLFGA-RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD  239 (346)
T ss_dssp             SCCC---CCCCSCCCCTTCCHHHHTTC-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred             CCcc---cCCcccccccccCchHhhCC-CCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence            3221   13456899999999998652 4589999999999999999999999999999999999888888877654432


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                      ....  ..++ .+......++...+..+++.+.+||.+||..||.+|||+.|+|+||||.....
T Consensus       240 ~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          240 MCSL--PDYV-TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             TTSS--TTCC-CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             hccC--cccc-cccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence            2110  0000 00111112222334667899999999999999999999999999999987543


No 59 
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=4.1e-49  Score=407.57  Aligned_cols=298  Identities=42%  Similarity=0.646  Sum_probs=229.5

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-----
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-----  185 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-----  185 (604)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++..  ........+.+|+.+++.++||||+++++++....     
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   86 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVL--TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD   86 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEEC--CSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEec--CChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence            35789999999999999999999999999999999864  23445677899999999999999999999885432     


Q ss_pred             ----ccCcccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC-CCCcEEEeec
Q 007428          186 ----RREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-ADCKLKICDF  260 (604)
Q Consensus       186 ----~~~~~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~-~~~~vKL~DF  260 (604)
                          ......+|+||||++++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus        87 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           87 DVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             ----CCSCSEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             ccccccccCceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence                133467899999999999998864 5799999999999999999999999999999999999997 5679999999


Q ss_pred             cccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q 007428          261 GLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       261 Gla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      |+++................+|++|+|||++.+. ..++.++|||||||++|||++|+.||.+.+....+..+....+.+
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  244 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV  244 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCc-ccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9998654322222223445789999999987642 578999999999999999999999999999888888888777766


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCC
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVD  413 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~  413 (604)
                      ..+....+... ...++.........++....+.+++.+.+||.+||+.||.+|||++|+|+||||+.+..+.
T Consensus       245 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~  316 (320)
T 2i6l_A          245 HEEDRQELLSV-IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM  316 (320)
T ss_dssp             CHHHHHHHHTT-SCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred             chhhhhhhhhc-CcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence            65544332110 0011111111122223334467899999999999999999999999999999998765444


No 60 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=8.7e-49  Score=414.12  Aligned_cols=278  Identities=22%  Similarity=0.432  Sum_probs=227.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-----CCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-----HPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-----HpnIv~l~~~~~~~~~  186 (604)
                      .++|++++.||+|+||.||+|.+..+++.||||+++.   .......+.+|+.+|+.+.     ||||+++++++..   
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~---  107 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY---  107 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE---
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE---
Confidence            5789999999999999999999999999999999863   2334556778999999997     9999999999853   


Q ss_pred             cCcccEEEEEecccccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC-------------
Q 007428          187 REFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-------------  251 (604)
Q Consensus       187 ~~~~~l~lV~E~~~g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~-------------  251 (604)
                        ...+|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.             
T Consensus       108 --~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~  185 (360)
T 3llt_A          108 --YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRV  185 (360)
T ss_dssp             --TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred             --CCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcc
Confidence              34689999999989999998754  5999999999999999999999999999999999999975             


Q ss_pred             ------------CCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCC
Q 007428          252 ------------DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKP  319 (604)
Q Consensus       252 ------------~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~  319 (604)
                                  ++.+||+|||++......      ....+||+.|+|||++.+  ..|+.++|||||||++|+|++|+.
T Consensus       186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~  257 (360)
T 3llt_A          186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDY------HGSIINTRQYRAPEVILN--LGWDVSSDMWSFGCVLAELYTGSL  257 (360)
T ss_dssp             TTCCEEEEEEESCCCEEECCCTTCEETTSC------CCSCCSCGGGCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cccccccccccCCCCEEEEeccCceecCCC------CcCccCcccccCcHHHcC--CCCCCccchHHHHHHHHHHHHCCC
Confidence                        789999999999864322      134689999999999987  689999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCC-----------------CCCCHHHHHH
Q 007428          320 LFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKF-----------------PNADPLALHL  382 (604)
Q Consensus       320 PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------------~~~s~~~~dL  382 (604)
                      ||.+.+..+.+..+....+.++...+..........++....  ....+....                 ...++.+.+|
T Consensus       258 pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  335 (360)
T 3llt_A          258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDE--LKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDF  335 (360)
T ss_dssp             SCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTT--TEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCccc--ceecCcccccchhhhhhhhhcccccccchHHHHHHH
Confidence            999999999999999998888776554332111111110000  000010000                 1124678899


Q ss_pred             HHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          383 LERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       383 I~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                      |.+||++||.+|||+.|+|+||||+
T Consensus       336 i~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          336 LYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHhcCChhhCCCHHHHhcCcccC
Confidence            9999999999999999999999995


No 61 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=3.4e-49  Score=417.55  Aligned_cols=259  Identities=25%  Similarity=0.411  Sum_probs=218.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++.+.||+|+||.||+|+++.+|+.||||++++... .......+..|..+|+.+ +||||+++++++..     .
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~-----~   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT-----K   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC-----S
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe-----C
Confidence            4689999999999999999999999999999999964311 112345678899999877 89999999999854     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||. |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence            56999999997 69999999888999999999999999999999999999999999999999999999999999975432


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+....+..+...            
T Consensus       171 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------------  233 (345)
T 1xjd_A          171 GDA---KTNTFCGTPDYIAPEILLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------------  233 (345)
T ss_dssp             TTC---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------
T ss_pred             CCC---cccCCCCCcccCChhhhcC--CCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------------
Confidence            221   1345789999999999987  67999999999999999999999999987765444333210            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHH-HHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAE-EALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~-eiL~Hp~f~~~~~  411 (604)
                                     .+ .+   ...+++.+.+||.+||..||.+||++. ++++||||+++.+
T Consensus       234 ---------------~~-~~---p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          234 ---------------NP-FY---PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             ---------------CC-CC---CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             ---------------CC-CC---CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCH
Confidence                           00 01   124688999999999999999999998 9999999998653


No 62 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=6.2e-49  Score=410.68  Aligned_cols=256  Identities=25%  Similarity=0.447  Sum_probs=218.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|+++.+|+.||||++++... .......+.+|+.+|+.++||||+++++++..     ..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-----AQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----SS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----CC
Confidence            3579999999999999999999999999999999964321 12335667899999999999999999999843     45


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            6999999998 599999998889999999999999999999999999999999999999999999999999999864321


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                            ....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+....+..+...             
T Consensus       160 ------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-------------  218 (318)
T 1fot_A          160 ------TYTLCGTPDYIAPEVVST--KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA-------------  218 (318)
T ss_dssp             ------BCCCCSCTTTCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC-------------
T ss_pred             ------cccccCCccccCHhHhcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence                  234689999999999987  68999999999999999999999999887765444433210             


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-----CHHHHhcCcccccCcC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-----TAEEALADPYFHGLAN  411 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-----ta~eiL~Hp~f~~~~~  411 (604)
                                   ..  .+   .+.+++.+.+||.+||..||.+||     +++++++||||+++.+
T Consensus       219 -------------~~--~~---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          219 -------------EL--RF---PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             -------------CC--CC---CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             -------------CC--CC---CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCH
Confidence                         00  01   134688999999999999999999     9999999999987643


No 63 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.9e-49  Score=415.04  Aligned_cols=285  Identities=34%  Similarity=0.621  Sum_probs=227.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||+++++++.     ....
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~   98 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKKR   98 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCCE
Confidence            46899999999999999999999999999999998655444445667889999999999999999999984     3456


Q ss_pred             EEEEEeccccc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~g~-L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+||||++++ |..++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus        99 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A           99 WYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             EEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             EEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            89999999965 55555666789999999999999999999999999999999999999999999999999997643322


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .   .....+||++|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++............
T Consensus       179 ~---~~~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (331)
T 4aaa_A          179 E---VYDDEVATRWYRAPELLVGD-VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNK  254 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTC-TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             c---ccCCCcCCccccCcccccCC-CCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhh
Confidence            1   12456899999999998762 4789999999999999999999999999999999888888888776654332211


Q ss_pred             HHHHHHhhhcc---cCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          351 EKARRYLGSMR---KKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       351 ~~~~~~l~~~~---~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                      ..   ......   .....+....++.+++.+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       255 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          255 NP---VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             CG---GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             cc---ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            00   000000   00111222334577899999999999999999999999999999975


No 64 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.6e-49  Score=432.84  Aligned_cols=269  Identities=23%  Similarity=0.386  Sum_probs=221.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|+++++||+|+||.||+|+++.+++.||||++++... .......+.+|+.+|..++||||+++++++..     ..
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-----~~  147 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD-----DN  147 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-----SS
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CC
Confidence            4689999999999999999999999999999999964211 11122337789999999999999999999844     45


Q ss_pred             cEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+|||||||. |+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~  227 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  227 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence            6999999996 699999987 56899999999999999999999999999999999999999999999999999976543


Q ss_pred             CCCCcccccccccCcccccccccccc---CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~---~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ...  ...+..+||++|+|||++...   ...|+.++|||||||++|||++|++||.+.+..+.+..|....        
T Consensus       228 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~--------  297 (437)
T 4aw2_A          228 DGT--VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK--------  297 (437)
T ss_dssp             TSC--EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH--------
T ss_pred             CCC--cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc--------
Confidence            322  223456899999999998621   2568999999999999999999999999988766655543210        


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCC--CCCHHHHhcCcccccCcCCC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKD--RPTAEEALADPYFHGLANVD  413 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~--Rpta~eiL~Hp~f~~~~~~~  413 (604)
                                        ....+......+++.+++||++||..+|++  |++++|+++||||+++.+..
T Consensus       298 ------------------~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          298 ------------------ERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             ------------------HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             ------------------ccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence                              001122334568999999999999999988  99999999999999876543


No 65 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.3e-48  Score=410.96  Aligned_cols=268  Identities=22%  Similarity=0.391  Sum_probs=215.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++++.||+|+||.||+|+++.+++.||||++++... .......+.+|+.+|+.+ +||||+++++++..     .
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-----~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----C
Confidence            3579999999999999999999999999999999975432 334566788999999987 89999999999844     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            56999999997 59999998888999999999999999999999999999999999999999999999999999985332


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||..........          ......+
T Consensus       163 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----------~~~~~~~  227 (345)
T 3a8x_A          163 PGD---TTSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD----------QNTEDYL  227 (345)
T ss_dssp             TTC---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-----------------CHHHH
T ss_pred             CCC---cccccCCCccccCccccCC--CCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc----------cccHHHH
Confidence            221   1345789999999999987  689999999999999999999999996532110000          0000000


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCH------HHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTA------EEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta------~eiL~Hp~f~~~~~  411 (604)
                          ......   ..  ..+   ...+++.+.+||.+||..||.+||++      +|+++||||+++.+
T Consensus       228 ----~~~i~~---~~--~~~---p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          228 ----FQVILE---KQ--IRI---PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             ----HHHHHH---CC--CCC---CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             ----HHHHHc---CC--CCC---CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence                000010   11  111   13578999999999999999999995      89999999987653


No 66 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=1.2e-48  Score=420.78  Aligned_cols=268  Identities=22%  Similarity=0.389  Sum_probs=213.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ..+|+++++||+|+||.||+|+++.+++.||||++++... .......+.+|+.+|+.+ +||||+++++++..     .
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-----~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-----S
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-----C
Confidence            4589999999999999999999999999999999975432 222345578899999887 89999999999854     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||. |+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            56999999998 58999999888999999999999999999999999999999999999999999999999999985332


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.........       .....+   
T Consensus       206 ~~~---~~~~~~gt~~Y~aPE~l~~--~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~-------~~~~~~---  270 (396)
T 4dc2_A          206 PGD---TTSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ-------NTEDYL---  270 (396)
T ss_dssp             TTC---CBCCCCBCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-------------CCHHHH---
T ss_pred             CCC---ccccccCCcccCCchhhcC--CCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch-------hhHHHH---
Confidence            222   2356799999999999987  6899999999999999999999999975432111000       000000   


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCH------HHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTA------EEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta------~eiL~Hp~f~~~~~  411 (604)
                          ......   ..  ..   ....+++.+.+||.+||+.||.+||++      +|+++||||+++.+
T Consensus       271 ----~~~i~~---~~--~~---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          271 ----FQVILE---KQ--IR---IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             ----HHHHHH---CC--CC---CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             ----HHHHhc---cc--cC---CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence                000000   11  11   113478999999999999999999985      89999999998753


No 67 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.1e-48  Score=414.81  Aligned_cols=259  Identities=22%  Similarity=0.391  Sum_probs=218.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++++.||+|+||.||+|+++.+|+.||||++++... .......+.+|..+|..+ +||+|+++++++..     .
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-----~   93 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----M   93 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-----S
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-----C
Confidence            4689999999999999999999999999999999964321 123356678999999887 79999999999844     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||. |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            56999999997 59999999888999999999999999999999999999999999999999999999999999985332


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+....+..+...            
T Consensus       174 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------------  236 (353)
T 2i0e_A          174 DGV---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------------  236 (353)
T ss_dssp             TTC---CBCCCCSCGGGCCHHHHTT--CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------
T ss_pred             CCc---ccccccCCccccChhhhcC--CCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------------
Confidence            221   1345789999999999977  68999999999999999999999999987765544433220            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-----HHHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-----AEEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-----a~eiL~Hp~f~~~~~  411 (604)
                                    ..  .+   ...+++.+.+||.+||..||.+||+     ++++++||||+++.+
T Consensus       237 --------------~~--~~---p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          237 --------------NV--AY---PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             --------------CC--CC---CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             --------------CC--CC---CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence                          00  01   1357899999999999999999994     799999999987653


No 68 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=6.9e-48  Score=392.84  Aligned_cols=263  Identities=29%  Similarity=0.489  Sum_probs=222.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|..||+|++............+.+|+.+++.++||||+++++++..     ...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~   79 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE-----ESF   79 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----CCE
Confidence            468999999999999999999999999999999997655555566788999999999999999999999843     346


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc---EEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~---vKL~DFGla~~~~  267 (604)
                      .|+||||+. ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++.   +||+|||++....
T Consensus        80 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           80 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            899999998 589999988889999999999999999999999999999999999999987665   9999999997653


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....    .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+....          
T Consensus       160 ~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~----------  223 (284)
T 3kk8_A          160 DSEA----WHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA----------  223 (284)
T ss_dssp             SSCB----CCCSCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----------
T ss_pred             cCcc----ccCCCCCcCCcCchhhcC--CCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc----------
Confidence            3221    245689999999999977  678999999999999999999999998877554443332211          


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANV  412 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~  412 (604)
                                       .......+..+++.+.+||.+||+.||.+|||+.|+|+||||......
T Consensus       224 -----------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          224 -----------------YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             -----------------CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred             -----------------ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence                             111122345678999999999999999999999999999999875443


No 69 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=1.5e-48  Score=413.22  Aligned_cols=255  Identities=22%  Similarity=0.383  Sum_probs=218.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|++..+|+.||||++++.. ........+.+|+.+|+.++||||+++++++..     ..
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-----NS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----CC
Confidence            468999999999999999999999999999999986421 112335678899999999999999999999854     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence            6999999997 699999998889999999999999999999999999999999999999999999999999999865322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                            ....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+....+..+...             
T Consensus       195 ------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-------------  253 (350)
T 1rdq_E          195 ------TWTLCGTPEALAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-------------  253 (350)
T ss_dssp             ------BCCCEECGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------------
T ss_pred             ------cccccCCccccCHHHhcC--CCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC-------------
Confidence                  134689999999999987  68999999999999999999999999987765444433220             


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-----HHHHhcCcccccCc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-----AEEALADPYFHGLA  410 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-----a~eiL~Hp~f~~~~  410 (604)
                                   ..  .+   ...+++.+.+||.+||+.||.+||+     ++|+++||||+++.
T Consensus       254 -------------~~--~~---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          254 -------------KV--RF---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             -------------CC--CC---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             -------------CC--CC---CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence                         00  01   1346889999999999999999998     99999999998754


No 70 
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=1.3e-48  Score=412.11  Aligned_cols=292  Identities=35%  Similarity=0.615  Sum_probs=223.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc--cCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR--REF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~--~~~  189 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++....   .......+|+..++.++||||+++++++.....  ...
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP---RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCT---TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc---cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            468999999999999999999999999999999985422   222345678888999999999999999864322  223


Q ss_pred             ccEEEEEecccccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH--HCCCccccCCCCCeeeCC-CCcEEEeeccc
Q 007428          190 KDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIH--TANVFHRDLKPKNILANA-DCKLKICDFGL  262 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~----~~~~l~~~~~~~i~~qil~aL~yLH--~~gIiHrDLKp~NILl~~-~~~vKL~DFGl  262 (604)
                      ..+|+|||||.++|...+.    ....+++..++.++.||+.||.|||  +.||+||||||+|||++. ++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~  178 (360)
T 3e3p_A           99 IYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGS  178 (360)
T ss_dssp             EEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred             eeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence            4588999999998776554    4567899999999999999999999  999999999999999996 89999999999


Q ss_pred             cccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          263 ARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       263 a~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      ++.......    ....+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+...++..+...++.+..
T Consensus       179 a~~~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          179 AKKLSPSEP----NVAYICSRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CBCCCTTSC----CCSTTSCGGGCCHHHHTTC-SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             ceecCCCCC----cccccCCcceeCHHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence            986543322    2356899999999998652 45899999999999999999999999999999999999999999988


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCC----CCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCCC
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFS----HKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVDR  414 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~~  414 (604)
                      +.+..+.......   ........++.    ......++.+.+||.+||++||.+|||+.|+|+||||+++.....
T Consensus       254 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  326 (360)
T 3e3p_A          254 EVLRKLNPSHTDV---DLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPAT  326 (360)
T ss_dssp             HHHHHHCTTCCCG---GGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTC
T ss_pred             HHHHhcccchhhc---cccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCccc
Confidence            7766543211000   00011111111    222336788999999999999999999999999999998876543


No 71 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=3.9e-48  Score=405.40  Aligned_cols=258  Identities=28%  Similarity=0.469  Sum_probs=208.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC---CCCcEEEEEEeccccC--ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT---HTGERVAIKKINDVFE--HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~---~~g~~vAIK~i~~~~~--~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      .++|++.+.||+|+||.||+|++.   .+|+.||||++++...  .......+.+|+.+|+.++||||+++++++..   
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---   92 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT---   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC---
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc---
Confidence            357999999999999999999985   6899999999975321  22344567899999999999999999999854   


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                        ...+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        93 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A           93 --GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             --SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             --CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence              356999999997 68999999888999999999999999999999999999999999999999999999999999975


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......   .....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+....+..+...         
T Consensus       171 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~---------  236 (327)
T 3a62_A          171 SIHDGT---VTHTFCGTIEYMAPEILMR--SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---------  236 (327)
T ss_dssp             -----------CTTSSCCTTSCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT---------
T ss_pred             cccCCc---cccccCCCcCccCHhhCcC--CCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC---------
Confidence            432221   1245689999999999877  67899999999999999999999999987765544433221         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-----CHHHHhcCcccccCc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-----TAEEALADPYFHGLA  410 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-----ta~eiL~Hp~f~~~~  410 (604)
                                       ..     ...+.+++.+.+||.+||..||.+||     ++.|+++||||+++.
T Consensus       237 -----------------~~-----~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          237 -----------------KL-----NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             -----------------CC-----CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             -----------------CC-----CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence                             00     01134688999999999999999999     899999999998764


No 72 
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.2e-48  Score=404.32  Aligned_cols=290  Identities=35%  Similarity=0.595  Sum_probs=233.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc---CCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-HTGERVAIKKINDVFEHVSDATRILREIKLLRLL---RHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l---~HpnIv~l~~~~~~~~~~  187 (604)
                      .++|++.+.||+|+||.||+|.+. .+|+.||||+++...........+.+|+.+++.+   .||||+++++++......
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            368999999999999999999995 6789999999864332222223456777777766   899999999998633323


Q ss_pred             CcccEEEEEecccccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ....+|+||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        90 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~  169 (326)
T 1blx_A           90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  169 (326)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             CCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccccc
Confidence            456799999999999999998754  499999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      .....    ......||+.|+|||++.+  ..++.++|||||||++|+|++|++||.+.+....+..+...++.+....+
T Consensus       170 ~~~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          170 YSFQM----ALTSVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCGGG----GGCCCCCCCTTCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             ccCCC----CccccccccceeCHHHHhc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence            43211    2345689999999999877  67999999999999999999999999999998888888888888766544


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                      .......    ...+......+.....+.+++.+.+||.+||..||.+|||+.|+|+||||+++..
T Consensus       244 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          244 PRDVALP----RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             CTTCSSC----GGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             ccccccc----hhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence            3211000    0011112222334455678999999999999999999999999999999987754


No 73 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=8.1e-49  Score=424.05  Aligned_cols=265  Identities=25%  Similarity=0.346  Sum_probs=217.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|+++.+++.||||++++... .......+.+|+.+|+.++||||+++++++..     ..
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~~  142 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD-----DR  142 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CC
Confidence            5689999999999999999999999999999999864211 11122346789999999999999999999943     45


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|||||||. |+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+.....
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE  221 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence            6999999996 689998865 47999999999999999999999999999999999999999999999999999765332


Q ss_pred             CCCcccccccccCccccccccccccCC--CCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFS--KYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~--~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      .  .......+||+.|+|||++.+...  .|+.++|||||||++|||++|++||.+.+....+..|....          
T Consensus       222 ~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~----------  289 (410)
T 3v8s_A          222 G--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK----------  289 (410)
T ss_dssp             S--EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH----------
T ss_pred             C--cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc----------
Confidence            2  112345789999999999876211  17889999999999999999999999888766555443210          


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCC--CCCHHHHhcCcccccCcC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKD--RPTAEEALADPYFHGLAN  411 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~--Rpta~eiL~Hp~f~~~~~  411 (604)
                           .     .    ..  + .....+++.+++||.+||..+|.+  ||+++||++||||+++.+
T Consensus       290 -----~-----~----~~--~-p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w  338 (410)
T 3v8s_A          290 -----N-----S----LT--F-PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  338 (410)
T ss_dssp             -----H-----H----CC--C-CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred             -----c-----c----cc--C-CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence                 0     0    00  0 112457899999999999999988  999999999999998754


No 74 
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=6.8e-48  Score=401.52  Aligned_cols=259  Identities=27%  Similarity=0.454  Sum_probs=219.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh----hHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV----SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~----~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ++|++.+.||+|+||.||+|.+..+|+.||||+++......    .....+.+|+.+|+.++||||+++++++..     
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----   86 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN-----   86 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence            57999999999999999999999999999999986532221    135678899999999999999999999843     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC----cEEEeecccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFGLA  263 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~----~vKL~DFGla  263 (604)
                      ...+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~  166 (321)
T 2a2a_A           87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (321)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence            356899999996 69999999888899999999999999999999999999999999999999888    7999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ........    .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+....+..+......... 
T Consensus       167 ~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-  239 (321)
T 2a2a_A          167 HEIEDGVE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE-  239 (321)
T ss_dssp             EECCTTCC----CCCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCH-
T ss_pred             eecCcccc----ccccCCCCCccCcccccC--CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccCh-
Confidence            86543222    245679999999999876  68899999999999999999999999988766655544332221111 


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                                ..+..+++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus       240 --------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          240 --------------------------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             --------------------------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             --------------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence                                      1123567889999999999999999999999999999764


No 75 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=2e-48  Score=417.41  Aligned_cols=263  Identities=25%  Similarity=0.417  Sum_probs=216.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+.+|+.++|||||++++++..     ..
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~-----~~   88 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD-----EE   88 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CC
Confidence            468999999999999999999999999999999986422 122345678899999999999999999999854     34


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||. ++|..++.....+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            6999999997 689999998889999999999999999999999999999999999999999999999999999865432


Q ss_pred             CCCcccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      .    .....+||+.|+|||++... ...|+.++|||||||++|||++|+.||.+.........+..             
T Consensus       169 ~----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-------------  231 (384)
T 4fr4_A          169 T----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT-------------  231 (384)
T ss_dssp             C----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHH-------------
T ss_pred             C----ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHH-------------
Confidence            2    23567899999999998642 14589999999999999999999999986543211111100             


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-HHHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-AEEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-a~eiL~Hp~f~~~~~  411 (604)
                             ...    . ..   .....+++.+.+||.+||..||.+||+ ++++++||||.++.+
T Consensus       232 -------~~~----~-~~---~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          232 -------FET----T-VV---TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             -------HHH----C-CC---CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             -------Hhh----c-cc---CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence                   000    0 00   111346889999999999999999998 999999999987654


No 76 
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=8.3e-49  Score=422.17  Aligned_cols=291  Identities=34%  Similarity=0.586  Sum_probs=213.3

Q ss_pred             CCeEE-eeEeeecCceEEEEEEEC--CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          113 SRYQI-QEVIGKGSYGVVGSAVDT--HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       113 ~~Y~i-~~~LG~G~fG~Vy~a~~~--~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      +.|++ .++||+|+||.||+|+++  .++..||||++....    ....+.+|+.+|+.|+||||+++++++...   ..
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~   92 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSH---AD   92 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TT
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CC
Confidence            35776 458999999999999965  578999999996432    224578999999999999999999998542   23


Q ss_pred             ccEEEEEecccccHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee----CCCCcEE
Q 007428          190 KDIYVVFELMESDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLK  256 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~---------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl----~~~~~vK  256 (604)
                      ..+|+||||++++|.+++...         ..+++..++.|+.||+.||.|||++||+||||||+|||+    +.++.+|
T Consensus        93 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~k  172 (405)
T 3rgf_A           93 RKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVK  172 (405)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred             CeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence            468999999999999888632         149999999999999999999999999999999999999    6778999


Q ss_pred             EeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCCh---------H
Q 007428          257 ICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNV---------V  327 (604)
Q Consensus       257 L~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~---------~  327 (604)
                      |+|||+|+...............+||++|+|||++.+. ..|+.++||||||||||+|++|++||.+...         .
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             ECCTTCCC----------------CCCTTCCHHHHTTC-CSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred             EEECCCceecCCCCcccccCCCceecCcccCchhhcCC-CcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence            99999998754332222234557899999999998762 4589999999999999999999999987654         4


Q ss_pred             HHHHHHHhhcCCCChhHHHHHhhHH-HHHHhhhcccCCCCC------CCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHH
Q 007428          328 HQLDLMTDLLGTPSTESISRIRNEK-ARRYLGSMRKKQPVP------FSHKFPNADPLALHLLERLLAFDPKDRPTAEEA  400 (604)
Q Consensus       328 ~~l~~i~~~lg~p~~~~i~~~~~~~-~~~~l~~~~~~~~~~------~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~ei  400 (604)
                      +++..+...+|.|....+..+.... .......+.......      +.......++.+.+||.+||.+||.+|||++|+
T Consensus       252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~  331 (405)
T 3rgf_A          252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA  331 (405)
T ss_dssp             HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            7889999999999887665442110 011111111100000      011122346789999999999999999999999


Q ss_pred             hcCcccccCcC
Q 007428          401 LADPYFHGLAN  411 (604)
Q Consensus       401 L~Hp~f~~~~~  411 (604)
                      |+||||.....
T Consensus       332 L~hp~f~~~~~  342 (405)
T 3rgf_A          332 MQDPYFLEDPL  342 (405)
T ss_dssp             HTSGGGTSSSC
T ss_pred             hcChhhccCCC
Confidence            99999987543


No 77 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.1e-48  Score=395.55  Aligned_cols=256  Identities=30%  Similarity=0.480  Sum_probs=196.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++..     ..
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~   86 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KD   86 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEec-----CC
Confidence            4689999999999999999999999999999999965332 22335678899999999999999999999854     34


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|+||||++++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        87 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  166 (275)
T 2eue_A           87 EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             CEEEEEECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred             eEEEEehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence            68999999999999999988899999999999999999999999999999999999999999999999999997653322


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .    ....+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+.......+...              
T Consensus       167 ~----~~~~~~t~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--------------  227 (275)
T 2eue_A          167 F----LKTSCGSPNYAAPEVISGK-LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG--------------  227 (275)
T ss_dssp             ------------CTTCCHHHHCC------THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--------------
T ss_pred             c----ccCCCCCcCcCCceeeeCC-CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence            1    2445799999999998762 23478999999999999999999999887654433322211              


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                  ..     .....+++.+.+||.+||+.||.+|||++|+|+||||+.
T Consensus       228 ------------~~-----~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~  268 (275)
T 2eue_A          228 ------------VY-----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             ------------CC-----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             ------------CC-----CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence                        00     111346889999999999999999999999999999975


No 78 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3e-48  Score=414.52  Aligned_cols=259  Identities=27%  Similarity=0.444  Sum_probs=210.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHH-HHHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKL-LRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~i-L~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++++.||+|+||.||+|+++.+++.||||++++... .......+.+|..+ ++.++||||+++++++..     .
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-----~  111 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----A  111 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-----S
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-----C
Confidence            4689999999999999999999999999999999965322 22334566778777 577899999999999854     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus       112 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          112 DKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            56999999998 58999999888999999999999999999999999999999999999999999999999999986433


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++|||||||++|||++|.+||.+.+....+..+...            
T Consensus       192 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------------  254 (373)
T 2r5t_A          192 HNS---TTSTFCGTPEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------------  254 (373)
T ss_dssp             CCC---CCCSBSCCCCCCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------------
T ss_pred             CCC---ccccccCCccccCHHHhCC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------------
Confidence            222   1345789999999999987  68999999999999999999999999987765544433210            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCH----HHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTA----EEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta----~eiL~Hp~f~~~~~  411 (604)
                                      +.   ...+.+++.+.+||.+||+.||.+||++    .++++||||+++.+
T Consensus       255 ----------------~~---~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w  302 (373)
T 2r5t_A          255 ----------------PL---QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW  302 (373)
T ss_dssp             ----------------CC---CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCH
T ss_pred             ----------------cc---CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCH
Confidence                            00   1124578899999999999999999986    69999999997654


No 79 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1e-48  Score=423.49  Aligned_cols=269  Identities=22%  Similarity=0.339  Sum_probs=218.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|+++.+|+.||||++++... .......+.+|+.+|..++||||+++++++..     ..
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~-----~~  134 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD-----EN  134 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC-----SS
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----CC
Confidence            4689999999999999999999999999999999964211 11223447789999999999999999999844     45


Q ss_pred             cEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+|||||||. |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~  214 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA  214 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence            6999999996 6999999875 4799999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCcccccccccCcccccccccccc-----CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~-----~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ...  ......+||+.|+|||++...     ...|+.++|||||||++|||++|++||.+.+..+.+..|....      
T Consensus       215 ~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~------  286 (412)
T 2vd5_A          215 DGT--VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK------  286 (412)
T ss_dssp             TSC--EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH------
T ss_pred             CCc--cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc------
Confidence            222  112346899999999998631     1468999999999999999999999999888665555443210      


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCC---CCHHHHhcCcccccCcCCCC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDR---PTAEEALADPYFHGLANVDR  414 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~R---pta~eiL~Hp~f~~~~~~~~  414 (604)
                                    ..      ..+......+++.+++||++||. +|.+|   |+++|+++||||+++.+...
T Consensus       287 --------------~~------~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l  339 (412)
T 2vd5_A          287 --------------EH------LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGL  339 (412)
T ss_dssp             --------------HH------CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTS
T ss_pred             --------------cC------cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence                          00      00111124578999999999999 99998   59999999999998866544


No 80 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=3.3e-48  Score=411.94  Aligned_cols=259  Identities=31%  Similarity=0.468  Sum_probs=201.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|++..+++.||||++.....   ....+.+|+.+++.++||||+++++++...     ..
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~   90 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTP-----TH   90 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-----CE
Confidence            5689999999999999999999999999999999964322   235578999999999999999999999543     46


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc--EEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--LKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~--vKL~DFGla~~~~~  268 (604)
                      +|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++....
T Consensus        91 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           91 LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence            899999997 699999988889999999999999999999999999999999999999987765  99999999974322


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCcc-CchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPA-IDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k-~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...    ....+||++|+|||++.+  ..++.+ +|||||||++|+|++|+.||.+......+..+..            
T Consensus       171 ~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~------------  232 (361)
T 3uc3_A          171 HSQ----PKSTVGTPAYIAPEVLLR--QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQ------------  232 (361)
T ss_dssp             --------------CTTSCHHHHHC--SSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHH------------
T ss_pred             cCC----CCCCcCCCCcCChhhhcC--CCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHH------------
Confidence            211    244689999999999876  455544 8999999999999999999987543221111100            


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                             ....   .....   .....+++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus       233 -------~~~~---~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          233 -------RILS---VKYSI---PDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             -------HHHT---TCCCC---CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             -------HHhc---CCCCC---CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                   0000   00000   1123468999999999999999999999999999999654


No 81 
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=5.3e-48  Score=426.99  Aligned_cols=258  Identities=31%  Similarity=0.498  Sum_probs=214.0

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||.||+|+++.++..||||++............+.+|+.+|+.++||||+++++++..     ...+
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~  111 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED-----KRNY  111 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCEE
Confidence            47999999999999999999999999999999997544333445678899999999999999999999943     4568


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC---CcEEEeeccccccccC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVSFN  268 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~---~~vKL~DFGla~~~~~  268 (604)
                      |+|||||. ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||++.....
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            99999998 5899999888899999999999999999999999999999999999999764   4599999999987543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...    ....+||+.|+|||++.+   .|+.++|||||||++|+|++|.+||.+.+..+.+..+......         
T Consensus       192 ~~~----~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------  255 (494)
T 3lij_A          192 QKK----MKERLGTAYYIAPEVLRK---KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT---------  255 (494)
T ss_dssp             TBC----BCCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---------
T ss_pred             Ccc----ccccCCCcCeeCHHHHcc---cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------
Confidence            221    345689999999999854   6899999999999999999999999988765555444321111         


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                        .....+..+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       256 ------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          256 ------------------FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             ------------------CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             ------------------CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence                              1112345678999999999999999999999999999999864


No 82 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=3.2e-48  Score=410.15  Aligned_cols=259  Identities=27%  Similarity=0.436  Sum_probs=210.4

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc---CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF---EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~---~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ++|++.+.||+|+||.||+|.++.+|+.||||++....   ........+.+|+.+|+.++||||+++++++.     ..
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~   98 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-----SD   98 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence            47999999999999999999999999999999985321   11123567889999999999999999999984     34


Q ss_pred             ccEEEEEeccc-ccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc---EEEeecc
Q 007428          190 KDIYVVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFG  261 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~----~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~---vKL~DFG  261 (604)
                      ..+|+|||||. ++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||
T Consensus        99 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg  178 (351)
T 3c0i_A           99 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG  178 (351)
T ss_dssp             TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred             CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence            56999999998 6888777543    35899999999999999999999999999999999999987655   9999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPS  341 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~  341 (604)
                      ++........   .....+||+.|+|||++.+  ..|+.++||||||||+|+|++|..||.+... ..+..+......  
T Consensus       179 ~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~--  250 (351)
T 3c0i_A          179 VAIQLGESGL---VAGGRVGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYK--  250 (351)
T ss_dssp             TCEECCTTSC---BCCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCC--
T ss_pred             ceeEecCCCe---eecCCcCCcCccCHHHHcC--CCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCC--
Confidence            9986543221   2345689999999999977  6789999999999999999999999987532 222222111000  


Q ss_pred             hhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          342 TESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       342 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                               .....++.+++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       251 -------------------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          251 -------------------------MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             -------------------------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             -------------------------CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence                                     0011224578899999999999999999999999999999864


No 83 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=2e-48  Score=424.87  Aligned_cols=259  Identities=26%  Similarity=0.439  Sum_probs=209.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++... ........+.+|+.+|+.++||||+++++++.     ...
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~-----~~~  221 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ-----THD  221 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEE-----ETT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEe-----eCC
Confidence            468999999999999999999999999999999986432 22234466789999999999999999999984     335


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+|+|||||. ++|.+++.....+++..++.++.||+.||.|||+ .||+||||||+|||++.++.+||+|||+|+....
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  301 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  301 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred             EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence            6899999998 5899999888899999999999999999999998 9999999999999999999999999999975432


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   .....+||+.|+|||++.+  ..|+.++||||||||||||++|+.||.+.+.......+...            
T Consensus       302 ~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------------  364 (446)
T 4ejn_A          302 DGA---TMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------------  364 (446)
T ss_dssp             --------CCSSSCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------
T ss_pred             CCc---ccccccCCccccCHhhcCC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------------
Confidence            221   2355789999999999977  78999999999999999999999999887765544433210            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-----CHHHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-----TAEEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-----ta~eiL~Hp~f~~~~~  411 (604)
                                    ...     ....+++.+.+||.+||++||.+||     +++|+|+||||.++.+
T Consensus       365 --------------~~~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          365 --------------EIR-----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             --------------CCC-----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             --------------CCC-----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence                          000     1134688999999999999999999     9999999999998643


No 84 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=3.2e-48  Score=405.53  Aligned_cols=263  Identities=27%  Similarity=0.393  Sum_probs=212.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++..     ...
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~   79 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNI   79 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEec-----CCe
Confidence            4689999999999999999999999999999999853221 1223567899999999999999999999843     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+|||||. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  159 (323)
T 3tki_A           80 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (323)
T ss_dssp             EEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             EEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence            899999997 5899999887789999999999999999999999999999999999999999999999999997653222


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      . .......+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+........                 
T Consensus       160 ~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-----------------  220 (323)
T 3tki_A          160 R-ERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD-----------------  220 (323)
T ss_dssp             E-ECCBCSCCSCGGGSCHHHHHCS-SBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH-----------------
T ss_pred             c-ccccCCCccCcCccCcHHhccC-CCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH-----------------
Confidence            1 1123456899999999998762 23477899999999999999999999875532211100                 


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                           +...   .   .....+..+++.+.+||.+||..||.+|||+.|+|+||||+...
T Consensus       221 -----~~~~---~---~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          221 -----WKEK---K---TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             -----HHTT---C---TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             -----Hhcc---c---ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence                 0000   0   01112345788999999999999999999999999999998643


No 85 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.6e-48  Score=397.97  Aligned_cols=260  Identities=25%  Similarity=0.472  Sum_probs=206.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC------------------------hhHHHHHHHHHHHHH
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH------------------------VSDATRILREIKLLR  167 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~------------------------~~~~~~~~~Ei~iL~  167 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++......                        ......+.+|+.+|+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            36899999999999999999999999999999998643211                        112356789999999


Q ss_pred             HcCCCCeeEEeeeecCCCccCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCC
Q 007428          168 LLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN  246 (604)
Q Consensus       168 ~l~HpnIv~l~~~~~~~~~~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~N  246 (604)
                      .++||||+++++++....   ...+|+||||++ ++|.+++ ....+++..+..++.||+.||.|||++||+||||||+|
T Consensus        92 ~l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPN---EDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             TCCCTTBCCEEEEEECSS---SSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             hCCCCCCCeEEEEEEcCC---CCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            999999999999986432   356899999998 4666543 34579999999999999999999999999999999999


Q ss_pred             eeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCC-CCCccCchhhHHHHHHHHHhCCCCCCCCC
Q 007428          247 ILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFS-KYTPAIDIWSIGCIFAEMLTGKPLFPGKN  325 (604)
Q Consensus       247 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~-~~~~k~DIWSlGvil~eLltG~~PF~~~~  325 (604)
                      ||++.++.+||+|||+++.......   .....+||+.|+|||++.+... .++.++|||||||++|+|++|+.||.+.+
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSC---EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEECCCCCEEEecCCCccccccccc---cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            9999999999999999986543221   2345689999999999876211 14778999999999999999999998766


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcc
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPY  405 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~  405 (604)
                      .......+..                          ....  + ...+.+++.+.+||.+||..||.+|||+.|+|+|||
T Consensus       245 ~~~~~~~~~~--------------------------~~~~--~-~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          245 IMCLHSKIKS--------------------------QALE--F-PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHHHHHHH--------------------------CCCC--C-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             HHHHHHHHhc--------------------------ccCC--C-CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence            4332222111                          0000  0 112467899999999999999999999999999999


Q ss_pred             cc
Q 007428          406 FH  407 (604)
Q Consensus       406 f~  407 (604)
                      |+
T Consensus       296 ~~  297 (298)
T 2zv2_A          296 VT  297 (298)
T ss_dssp             HH
T ss_pred             cc
Confidence            95


No 86 
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=5.6e-48  Score=425.77  Aligned_cols=260  Identities=33%  Similarity=0.533  Sum_probs=218.8

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++++.||+|+||+||+|.+..+++.||||++............+.+|+.+|+.++||||+++++++..     ...+
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~   96 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SSSF   96 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc-----CCEE
Confidence            57999999999999999999999999999999996543333456778999999999999999999999843     4569


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC---CCCcEEEeeccccccccC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN---ADCKLKICDFGLARVSFN  268 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~---~~~~vKL~DFGla~~~~~  268 (604)
                      |+|||||. ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++....
T Consensus        97 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  176 (486)
T 3mwu_A           97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (486)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence            99999998 58999998888999999999999999999999999999999999999995   456799999999986543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...    ....+||+.|+|||++.+   .|+.++||||||||+|+|++|.+||.+.+..+.+..+......         
T Consensus       177 ~~~----~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------  240 (486)
T 3mwu_A          177 NTK----MKDRIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA---------  240 (486)
T ss_dssp             C--------CCTTGGGGCCGGGGGS---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---------
T ss_pred             CCc----cCCCcCCCCCCCHHHhCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------
Confidence            221    345689999999999865   5899999999999999999999999998876655544321111         


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                        .....+..+++.+.+||.+||..||.+|||+.++|+||||+....
T Consensus       241 ------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          241 ------------------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             ------------------SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             ------------------CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence                              011123457889999999999999999999999999999987643


No 87 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=5.8e-48  Score=400.82  Aligned_cols=252  Identities=27%  Similarity=0.303  Sum_probs=206.2

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ++|+++++||+|+||+||+|.+..+|+.||||++...............|+..+..+ .||||+++++++.     ....
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~~  131 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGGI  131 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCCE
Confidence            479999999999999999999999999999999876555555566667777776665 8999999999984     4456


Q ss_pred             EEEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+|||||+++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus       132 ~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          132 LYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             EEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred             EEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence            99999999999998887654 69999999999999999999999999999999999999999999999999997653322


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .    .....||+.|+|||++.+   .++.++|||||||++|||++|..||.+......   +..  +....        
T Consensus       212 ~----~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~--~~~~~--------  271 (311)
T 3p1a_A          212 A----GEVQEGDPRYMAPELLQG---SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ---LRQ--GYLPP--------  271 (311)
T ss_dssp             -------CCCCCGGGCCGGGGGT---CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH---HTT--TCCCH--------
T ss_pred             C----CcccCCCccccCHhHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---Hhc--cCCCc--------
Confidence            1    234579999999999865   689999999999999999999877755332111   110  00000        


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                         .....+++.+.+||.+||+.||.+|||++|+|+||||++
T Consensus       272 -------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          272 -------------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             -------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             -------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                               011346888999999999999999999999999999974


No 88 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-47  Score=411.84  Aligned_cols=258  Identities=27%  Similarity=0.437  Sum_probs=217.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++...  ...+...+.+|+.+|+.++||||+++++++..     ...
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~  122 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYE  122 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCE
Confidence            35799999999999999999999999999999998643  23345678899999999999999999999843     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC--CCcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~--~~~vKL~DFGla~~~~  267 (604)
                      +|+|||||. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.  ++.+||+|||+++...
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence            999999997 58999887554 7999999999999999999999999999999999999974  4779999999998654


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....    ....+||+.|+|||++.+  ..++.++|||||||++|||++|..||.+.+....+..+...           
T Consensus       203 ~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~-----------  265 (387)
T 1kob_A          203 PDEI----VKVTTATAEFAAPEIVDR--EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC-----------  265 (387)
T ss_dssp             TTSC----EEEECSSGGGCCHHHHTT--CCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC-----------
T ss_pred             CCcc----eeeeccCCCccCchhccC--CCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------
Confidence            3221    234589999999999977  67899999999999999999999999988765554433221           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                      ........+..+++.+.+||.+||..||.+|||+.|+|+||||++.
T Consensus       266 ----------------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          266 ----------------DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             ----------------CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             ----------------CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence                            0111123345789999999999999999999999999999999864


No 89 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.1e-47  Score=400.22  Aligned_cols=284  Identities=31%  Similarity=0.606  Sum_probs=221.1

Q ss_pred             ccCCCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCc
Q 007428          108 EYGEASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSR  186 (604)
Q Consensus       108 ~~~~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~  186 (604)
                      +++..++|++++.||+|+||.||+|.+..+++.||||+++.     .....+.+|+.+|+.++ ||||+++++++.... 
T Consensus        31 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-  104 (330)
T 3nsz_A           31 EWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPV-  104 (330)
T ss_dssp             CCEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT-
T ss_pred             cccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCC-
Confidence            34456789999999999999999999999999999999863     23466889999999997 999999999986432 


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC-cEEEeeccccc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLAR  264 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~-~vKL~DFGla~  264 (604)
                        ....++||||+. ++|.+++.   .+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus       105 --~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          105 --SRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE  179 (330)
T ss_dssp             --TCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             --CCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence              356899999998 57777764   489999999999999999999999999999999999999777 89999999998


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCC-CCCChHHHHHHHHhhcCCCChh
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLF-PGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF-~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      .......    ....+||+.|+|||++.+. ..++.++|||||||++|+|++|+.|| .+.+..+++..+...++.+...
T Consensus       180 ~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~  254 (330)
T 3nsz_A          180 FYHPGQE----YNVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY  254 (330)
T ss_dssp             ECCTTCC----CCSCCSCGGGCCHHHHTTC-CCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHH
T ss_pred             EcCCCCc----cccccccccccChhhhcCC-CcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhh
Confidence            6543322    2446899999999998652 56899999999999999999999998 4556667777777666643221


Q ss_pred             HH-HHHh---hHHHHHHhhhcccCCCCCCC-----CCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          344 SI-SRIR---NEKARRYLGSMRKKQPVPFS-----HKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       344 ~i-~~~~---~~~~~~~l~~~~~~~~~~~~-----~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      .. ....   .......+.   ......+.     .....+++.+.+||.+||++||.+|||++|+|+||||+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          255 DYIDKYNIELDPRFNDILG---RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             HHHHHTTCCCCTHHHHHHC---CCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             hHHHHhccccccchhhhhh---hccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            11 0000   000001111   11111111     11123689999999999999999999999999999999764


No 90 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=4.5e-48  Score=408.20  Aligned_cols=256  Identities=29%  Similarity=0.447  Sum_probs=209.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ++|++.+.||+|+||.||+|.++.+|+.||||++.+...      ...+|+.+|.++ +||||+++++++.     +...
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~   90 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYD-----DGKY   90 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEE-----CSSE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEE-----cCCE
Confidence            479999999999999999999999999999999965322      234688888887 7999999999984     3456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC----CcEEEeeccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD----CKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~----~~vKL~DFGla~~~  266 (604)
                      +|+|||||. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+..+    +.+||+|||+++..
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            999999997 5999999988899999999999999999999999999999999999998443    35999999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhhcCCCChh
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNV---VHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~---~~~l~~i~~~lg~p~~~  343 (604)
                      .....   .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|.+||.+...   .+.+..+.         
T Consensus       171 ~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~---------  236 (342)
T 2qr7_A          171 RAENG---LLMTPCYTANFVAPEVLER--QGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG---------  236 (342)
T ss_dssp             BCTTC---CBCCSSCCSSCCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH---------
T ss_pred             cCCCC---ceeccCCCccccCHHHhcC--CCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc---------
Confidence            43322   1245689999999999876  5688999999999999999999999986421   11111111         


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                        ..........++.+++.+.+||.+||..||.+|||+.++|+||||.++..
T Consensus       237 ------------------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~~  286 (342)
T 2qr7_A          237 ------------------SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ  286 (342)
T ss_dssp             ------------------HCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGGG
T ss_pred             ------------------cCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCccc
Confidence                              11111122345678999999999999999999999999999999976543


No 91 
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=7.2e-48  Score=410.61  Aligned_cols=283  Identities=27%  Similarity=0.417  Sum_probs=224.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC--------CCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR--------HPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~--------HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|++..+++.||||+++..   ......+.+|+.+|+.++        ||||+++++++..
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~  112 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI  112 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence            46899999999999999999999999999999999632   334567889999999986        7889999998853


Q ss_pred             CCccCcccEEEEEecccccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeCCCC-------
Q 007428          184 PSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADC-------  253 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~~~g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~~~~-------  253 (604)
                      .. .....+|+|||||+++|.+.+...  ..+++..++.++.||+.||.|||++ ||+||||||+|||++.++       
T Consensus       113 ~~-~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          113 SG-VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             EE-TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             cC-CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence            21 134568999999999988888665  4699999999999999999999998 999999999999999775       


Q ss_pred             ------------------------------------------cEEEeeccccccccCCCCCcccccccccCccccccccc
Q 007428          254 ------------------------------------------KLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELC  291 (604)
Q Consensus       254 ------------------------------------------~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l  291 (604)
                                                                .+||+|||++......      .+..+||+.|+|||++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~  265 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTRQYRSLEVL  265 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCGGGCCHHHH
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------CccCCCCCcccCChhh
Confidence                                                      7999999999865322      2445899999999999


Q ss_pred             cccCCCCCccCchhhHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCC
Q 007428          292 GSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN------VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQP  365 (604)
Q Consensus       292 ~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~------~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~  365 (604)
                      .+  ..|+.++||||||||||||++|+.||.+.+      ...++..+...+|.++...+......  ..++........
T Consensus       266 ~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~  341 (397)
T 1wak_A          266 IG--SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS--KEFFTKKGDLKH  341 (397)
T ss_dssp             HT--SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTG--GGTBCTTSSBSS
T ss_pred             cC--CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccc--ccccCCcccccc
Confidence            87  679999999999999999999999998765      56778888889998877655332110  000000000000


Q ss_pred             C----CC---------CCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          366 V----PF---------SHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       366 ~----~~---------~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                      .    ++         .......++.+.+||.+||+.||.+|||++|+|+||||++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            0    00         0001123456889999999999999999999999999963


No 92 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=3.3e-47  Score=386.82  Aligned_cols=256  Identities=32%  Similarity=0.474  Sum_probs=217.4

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++.+.||+|+||.||+|.+..++..||+|++.....  .....+.+|+.+|+.++||||+++++++..     ...+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~   81 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFED-----NTDI   81 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCeE
Confidence            579999999999999999999999999999999865332  345678899999999999999999999843     3568


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeeccccccccC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVSFN  268 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~  268 (604)
                      |+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           82 YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            99999997 5899999888899999999999999999999999999999999999999   7889999999999976543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...    .....||+.|+|||++.+   .++.++|||||||++|+|++|+.||.+.+.......+.......+.      
T Consensus       162 ~~~----~~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------  228 (277)
T 3f3z_A          162 GKM----MRTKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPE------  228 (277)
T ss_dssp             TSC----BCCCCSCTTTCCHHHHTT---CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCH------
T ss_pred             ccc----hhccCCCCCccChHHhcc---cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCc------
Confidence            221    245689999999999865   4899999999999999999999999987765555444332222111      


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                           ..+..+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus       229 ---------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          229 ---------------------KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             ---------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             ---------------------hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence                                 1123568889999999999999999999999999999754


No 93 
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.1e-47  Score=401.94  Aligned_cols=263  Identities=26%  Similarity=0.459  Sum_probs=192.0

Q ss_pred             CeEEe---eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCc
Q 007428          114 RYQIQ---EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       114 ~Y~i~---~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~  189 (604)
                      +|++.   +.||+|+||.||+|.+..+|+.||||++..     .....+.+|+.+|+.+. ||||+++++++..     .
T Consensus         9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~-----~   78 (325)
T 3kn6_A            9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK-----RMEANTQKEITALKLCEGHPNIVKLHEVFHD-----Q   78 (325)
T ss_dssp             HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG-----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred             ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh-----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-----C
Confidence            56665   789999999999999999999999999864     23456789999999997 9999999999843     4


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC---cEEEeecccccc
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFGLARV  265 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~vKL~DFGla~~  265 (604)
                      ..+|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++   .+||+|||+++.
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~  158 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL  158 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred             CEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence            56899999998 59999999988999999999999999999999999999999999999998766   899999999986


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......   .....+||+.|+|||++.+  ..|+.++|||||||++|+|++|+.||.+.+.....        ....+. 
T Consensus       159 ~~~~~~---~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--------~~~~~~-  224 (325)
T 3kn6_A          159 KPPDNQ---PLKTPCFTLHYAAPELLNQ--NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC--------TSAVEI-  224 (325)
T ss_dssp             CCC---------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C--------CCHHHH-
T ss_pred             cCCCCC---cccccCCCcCccCHHHhcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc--------ccHHHH-
Confidence            533221   2345689999999999977  68999999999999999999999999875431100        000000 


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                 +..+...........+..+++.+.+||.+||..||.+|||++|+|+||||++...
T Consensus       225 -----------~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~  279 (325)
T 3kn6_A          225 -----------MKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQ  279 (325)
T ss_dssp             -----------HHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred             -----------HHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCcc
Confidence                       0111111111111222457899999999999999999999999999999986543


No 94 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.3e-47  Score=405.30  Aligned_cols=257  Identities=28%  Similarity=0.443  Sum_probs=200.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++..    .....+.+|+.+|+.++||||+++++++..     ...
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~  122 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT----VDKKIVRTEIGVLLRLSHPNIIKLKEIFET-----PTE  122 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEEC-----SSE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc----hhHHHHHHHHHHHHhCCCCCCcceeeeEec-----CCe
Confidence            35799999999999999999999999999999998643    234567889999999999999999999854     346


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC---CCcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~vKL~DFGla~~~~  267 (604)
                      +|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++...
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            899999997 699999988888999999999999999999999999999999999999975   8899999999998653


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCChhHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVH-QLDLMTDLLGTPSTESIS  346 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~-~l~~i~~~lg~p~~~~i~  346 (604)
                      ...    .....+||+.|+|||++.+  ..++.++|||||||++|||++|..||.+..... .+..+..           
T Consensus       203 ~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~-----------  265 (349)
T 2w4o_A          203 HQV----LMKTVCGTPGYCAPEILRG--CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN-----------  265 (349)
T ss_dssp             --------------CGGGSCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT-----------
T ss_pred             ccc----ccccccCCCCccCHHHhcC--CCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh-----------
Confidence            221    1245689999999999987  679999999999999999999999997755432 1111111           


Q ss_pred             HHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          347 RIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       347 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                      .........++.+++.+.+||.+||..||.+|||+.|+|+||||.+..
T Consensus       266 ----------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          266 ----------------CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             ----------------TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             ----------------CCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                            111112233457889999999999999999999999999999998643


No 95 
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=2.4e-47  Score=397.02  Aligned_cols=282  Identities=31%  Similarity=0.534  Sum_probs=226.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEE-CCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC------eeEEeeeecCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVD-THTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD------IVEIKHIMLPP  184 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~-~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn------Iv~l~~~~~~~  184 (604)
                      .++|++.+.||+|+||.||+|.+ ..+++.||||+++..   ......+.+|+.+++.++|++      |+++++++.  
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~--   87 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE--   87 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE--
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc--
Confidence            46899999999999999999998 568999999999642   234567889999999987664      999999884  


Q ss_pred             CccCcccEEEEEecccccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC-----------
Q 007428          185 SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-----------  251 (604)
Q Consensus       185 ~~~~~~~l~lV~E~~~g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~-----------  251 (604)
                         ....+|+||||++++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++.           
T Consensus        88 ---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           88 ---HHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             ---ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred             ---cCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcc
Confidence               345699999999999999998765  6899999999999999999999999999999999999987           


Q ss_pred             --------CCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCC
Q 007428          252 --------DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPG  323 (604)
Q Consensus       252 --------~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~  323 (604)
                              ++.+||+|||++......      ....+||+.|+|||++.+  ..++.++|||||||++|||++|..||.+
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVILA--LGWSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHTT--SCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ccccccccCCCceEeeCcccccCccc------cccccCCccccChHHhhC--CCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                    678999999999764322      234589999999999987  6899999999999999999999999999


Q ss_pred             CChHHHHHHHHhhcCCCChhHHHHHhhHH--------------HHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCC
Q 007428          324 KNVVHQLDLMTDLLGTPSTESISRIRNEK--------------ARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAF  389 (604)
Q Consensus       324 ~~~~~~l~~i~~~lg~p~~~~i~~~~~~~--------------~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~  389 (604)
                      .+..+.+..+...++..+...+.......              ...+....... ...+.......++.+.+||.+||..
T Consensus       237 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~  315 (339)
T 1z57_A          237 HDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP-LKEFMLSQDVEHERLFDLIQKMLEY  315 (339)
T ss_dssp             SCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC-GGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred             CChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcc-hhhhcccchhhHHHHHHHHHHHhCc
Confidence            99999999999988887776554332110              00000000000 0001111123356789999999999


Q ss_pred             CCCCCCCHHHHhcCcccccCc
Q 007428          390 DPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       390 DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      ||.+|||+.|+|+||||+.+.
T Consensus       316 dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          316 DPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             STTTSCCHHHHTTSGGGGGGG
T ss_pred             CcccccCHHHHhcCHHHHHHh
Confidence            999999999999999998753


No 96 
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=2.1e-47  Score=420.62  Aligned_cols=260  Identities=30%  Similarity=0.483  Sum_probs=220.6

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ++|++.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+|+.++||||+++++++..     ...
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~  100 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED-----KGY  100 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----CCE
Confidence            57999999999999999999999999999999986432 223456778999999999999999999999843     456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla~~~~  267 (604)
                      +|+|||||. ++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus       101 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            999999997 6899999988899999999999999999999999999999999999999   567899999999998654


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...    .....+||+.|+|||++.+   .|+.++||||||||+|+|++|.+||.+.+..+.+..+.......       
T Consensus       181 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------  246 (484)
T 3nyv_A          181 ASK----KMKDKIGTAYYIAPEVLHG---TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF-------  246 (484)
T ss_dssp             CCC----SHHHHTTGGGTCCHHHHHT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-------
T ss_pred             ccc----ccccCCCCccccCceeecC---CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-------
Confidence            322    1345689999999999865   68999999999999999999999999988766555443311110       


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                          ....+..+++.+.+||.+||++||.+|||+.|+|+||||+....
T Consensus       247 --------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          247 --------------------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             --------------------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             --------------------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence                                11123457889999999999999999999999999999987644


No 97 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=3.9e-47  Score=421.09  Aligned_cols=260  Identities=30%  Similarity=0.445  Sum_probs=217.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh-----------hHHHHHHHHHHHHHHcCCCCeeEEeee
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV-----------SDATRILREIKLLRLLRHPDIVEIKHI  180 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~-----------~~~~~~~~Ei~iL~~l~HpnIv~l~~~  180 (604)
                      .++|++++.||+|+||.||+|.++.++..||||++.......           .....+.+|+.+|+.++||||++++++
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~  114 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV  114 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            468999999999999999999999999999999986532111           234678899999999999999999999


Q ss_pred             ecCCCccCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC---cEE
Q 007428          181 MLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLK  256 (604)
Q Consensus       181 ~~~~~~~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~vK  256 (604)
                      +.     ....+|+|||||. ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++.++   .+|
T Consensus       115 ~~-----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          115 FE-----DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             EE-----CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred             EE-----cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEE
Confidence            84     3456999999997 58999998888999999999999999999999999999999999999998776   699


Q ss_pred             EeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q 007428          257 ICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDL  336 (604)
Q Consensus       257 L~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~  336 (604)
                      |+|||++........    ....+||+.|+|||++.+   .|+.++||||||||+|+|++|.+||.+.+....+..+...
T Consensus       190 l~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  262 (504)
T 3q5i_A          190 IVDFGLSSFFSKDYK----LRDRLGTAYYIAPEVLKK---KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG  262 (504)
T ss_dssp             ECCCTTCEECCTTSC----BCCCCSCTTTCCHHHHTT---CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             EEECCCCEEcCCCCc----cccccCCcCCCCHHHhcc---CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            999999986543322    345689999999999864   6899999999999999999999999998876665555432


Q ss_pred             cCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          337 LGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       337 lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      ......                           ..++.+++.+++||.+||.+||.+|||++|+|+||||+...
T Consensus       263 ~~~~~~---------------------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          263 KYYFDF---------------------------NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             CCCCCH---------------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             CCCCCc---------------------------cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            111111                           11245788999999999999999999999999999998754


No 98 
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=3.2e-47  Score=406.66  Aligned_cols=281  Identities=31%  Similarity=0.519  Sum_probs=226.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CC-----CeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HP-----DIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-Hp-----nIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++..   ......+.+|+.+++.+. |+     +|+.+++++..  
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  127 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF--  127 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE--
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc--
Confidence            46899999999999999999999999999999999642   234566778999998885 55     48999988843  


Q ss_pred             ccCcccEEEEEecccccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HCCCccccCCCCCeeeC--CCCcEEEee
Q 007428          186 RREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIH--TANVFHRDLKPKNILAN--ADCKLKICD  259 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH--~~gIiHrDLKp~NILl~--~~~~vKL~D  259 (604)
                         ...+|+||||++++|.+++...  ..+++..++.++.||+.||.|||  ..||+||||||+|||++  .++.+||+|
T Consensus       128 ---~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          128 ---RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             ---TTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             ---CCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence               3568999999999999999865  46999999999999999999999  57999999999999994  478899999


Q ss_pred             ccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q 007428          260 FGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGT  339 (604)
Q Consensus       260 FGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~  339 (604)
                      ||+++.....      ....+||+.|+|||++.+  ..|+.++||||||||+|||++|++||.+.+..+++..+...++.
T Consensus       205 FG~a~~~~~~------~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~  276 (382)
T 2vx3_A          205 FGSSCQLGQR------IYQYIQSRFYRSPEVLLG--MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI  276 (382)
T ss_dssp             CTTCEETTCC------CCSSCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCS
T ss_pred             ccCceecccc------cccccCCccccChHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            9999865322      245689999999999987  67999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCC---------CCCC-CCC------------------C-------CCCHHHHHHHH
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQP---------VPFS-HKF------------------P-------NADPLALHLLE  384 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~---------~~~~-~~~------------------~-------~~s~~~~dLI~  384 (604)
                      |+...+.....  .+.++..++....         ..+. ...                  .       ..++.+++||.
T Consensus       277 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  354 (382)
T 2vx3_A          277 PPAHILDQAPK--ARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLIL  354 (382)
T ss_dssp             CCHHHHTTCTT--HHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHH
T ss_pred             CCHHHHHhhHH--HHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHH
Confidence            88776554321  2333332221100         0000 000                  0       00147899999


Q ss_pred             hhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          385 RLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       385 ~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      +||++||.+|||++|+|+||||+...
T Consensus       355 ~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          355 RMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             HHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             HhcCCChhhCCCHHHHhcCcccccCC
Confidence            99999999999999999999998653


No 99 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=4.8e-47  Score=388.49  Aligned_cols=256  Identities=30%  Similarity=0.480  Sum_probs=207.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|.+.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.+|+.++||||+++++++.     ....
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~   94 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-----DYHN   94 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHhee-----cCCe
Confidence            3579999999999999999999999999999999865432 234567889999999999999999999984     3456


Q ss_pred             EEEEEeccc-ccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeecccc
Q 007428          192 IYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLA  263 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla  263 (604)
                      +|+|||||. ++|.+.+..    ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            899999998 488888854    3679999999999999999999999999999999999999   45688999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ........    .....||+.|+|||++.+   .++.++|||||||++|+|++|+.||.+.+.......+...       
T Consensus       175 ~~~~~~~~----~~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~-------  240 (285)
T 3is5_A          175 ELFKSDEH----STNAAGTALYMAPEVFKR---DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK-------  240 (285)
T ss_dssp             CC--------------CTTGGGCCHHHHTT---CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-------
T ss_pred             eecCCccc----CcCcccccCcCChHHhcc---CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC-------
Confidence            76533221    244679999999999754   6889999999999999999999999887643332221110       


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                           ...+......+++.+.+||.+||+.||.+|||+.|+|+||||++
T Consensus       241 ---------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          241 ---------------------EPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             ---------------------CCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ---------------------CcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                                 01111222346889999999999999999999999999999974


No 100
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=2.4e-47  Score=420.03  Aligned_cols=256  Identities=30%  Similarity=0.516  Sum_probs=216.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|.+.+.||+|+||.||+|.+..+|+.||||+++.... .......+.+|+.+|+.++||||+++++++...     .
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-----~   89 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-----S   89 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----C
Confidence            4689999999999999999999999999999999964211 112346788999999999999999999998543     4


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        90 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           90 DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             EEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            6899999996 699999988889999999999999999999999999999999999999999999999999999875432


Q ss_pred             CCCcccccccccCccccccccccccCCC-CCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~-~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      .    .....+||+.|+|||++.+  .. ++.++|||||||++|+|++|+.||.+.+....+..+....           
T Consensus       170 ~----~~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-----------  232 (476)
T 2y94_A          170 E----FLRTSCGSPNYAAPEVISG--RLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI-----------  232 (476)
T ss_dssp             C----CBCCCCSCSTTCCHHHHTT--CCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC-----------
T ss_pred             c----cccccCCCcCeEChhhccC--CCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-----------
Confidence            2    2345689999999999876  34 4789999999999999999999998876544443332110           


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                     .     .....+++.+.+||.+||..||.+|||+.|+++||||+..
T Consensus       233 ---------------~-----~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          233 ---------------F-----YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             ---------------C-----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             ---------------c-----CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                           0     0112468899999999999999999999999999999864


No 101
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=8.9e-47  Score=386.51  Aligned_cols=260  Identities=25%  Similarity=0.343  Sum_probs=215.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ...|++.+.||+|+||.||+|.+..++..||+|++............+.+|+.+|+.++||||+++++++.... .....
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~  103 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKC  103 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCce
Confidence            34689999999999999999999999999999999765555566778899999999999999999999875432 23456


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCCeeeC-CCCcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILAN-ADCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKp~NILl~-~~~~vKL~DFGla~~~~  267 (604)
                      +|+||||+. ++|.+++.....+++..++.++.||+.||.|||+.|  |+||||||+|||++ .++.+||+|||++....
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            899999997 599999998889999999999999999999999999  99999999999998 78999999999997543


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...     .....||+.|+|||++.+   .++.++|||||||++|+|++|+.||.+......+......           
T Consensus       184 ~~~-----~~~~~~t~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-----------  244 (290)
T 1t4h_A          184 ASF-----AKAVIGTPEFMAPEMYEE---KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-----------  244 (290)
T ss_dssp             TTS-----BEESCSSCCCCCGGGGGT---CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-----------
T ss_pred             ccc-----cccccCCcCcCCHHHHhc---cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc-----------
Confidence            221     244679999999998864   5899999999999999999999999875543332211100           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                    ...+.   ......++.+.+||.+||..||.+|||++|+|+||||++
T Consensus       245 --------------~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          245 --------------GVKPA---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             --------------TCCCG---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             --------------cCCcc---ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence                          00011   111235688999999999999999999999999999975


No 102
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=2.7e-47  Score=388.21  Aligned_cols=257  Identities=25%  Similarity=0.412  Sum_probs=213.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..++..||||++..... .......+.+|+.+++.++||||+++++++..     ..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD-----AT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----CC
Confidence            4689999999999999999999999999999999854221 11224568899999999999999999999843     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            6899999998 589999988889999999999999999999999999999999999999999999999999998653222


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      .     .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+.......+....            
T Consensus       163 ~-----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------  223 (279)
T 3fdn_A          163 R-----RTDLCGTLDYLPPEMIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVE------------  223 (279)
T ss_dssp             ----------CCCCTTCCHHHHTT--CCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC------------
T ss_pred             c-----ccccCCCCCccCHhHhcc--CCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCC------------
Confidence            1     244689999999999877  678999999999999999999999998877544443332210            


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                  .       .....+++.+.+||.+||..||.+|||+.|+|+||||+....
T Consensus       224 ------------~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          224 ------------F-------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             ------------C-------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             ------------C-------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence                        0       011236788999999999999999999999999999987543


No 103
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.3e-47  Score=399.64  Aligned_cols=260  Identities=28%  Similarity=0.365  Sum_probs=206.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCC--CCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRH--PDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~H--pnIv~l~~~~~~~~~~~~  189 (604)
                      ..+|++++.||+|+||.||+|.+ .+++.||||++............+.+|+.+|+.++|  |||+++++++..     .
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~-----~   81 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT-----D   81 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee-----C
Confidence            45799999999999999999987 468999999997554455556778999999999986  999999999854     3


Q ss_pred             ccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          190 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      ..+|+|||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++.....
T Consensus        82 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           82 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             SEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred             CEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence            4699999988899999999988999999999999999999999999999999999999997 688999999999865433


Q ss_pred             CCCcccccccccCcccccccccccc---------CCCCCccCchhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCC
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVV-HQLDLMTDLLGT  339 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~---------~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~-~~l~~i~~~lg~  339 (604)
                      ... ......+||+.|+|||++.+.         ...|+.++|||||||++|||++|+.||.+.... ..+..+      
T Consensus       161 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~------  233 (343)
T 3dbq_A          161 TTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI------  233 (343)
T ss_dssp             ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHH------
T ss_pred             ccc-ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHH------
Confidence            221 123456899999999998531         146889999999999999999999999764321 111111      


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                       +   ......   ......++.+.+||.+||..||.+|||+.|+|+||||+.
T Consensus       234 -----------------~---~~~~~~---~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          234 -----------------I---DPNHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             -----------------H---CTTSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             -----------------h---cCCccc---CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence                             0   001111   111234678999999999999999999999999999974


No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=4e-47  Score=405.63  Aligned_cols=255  Identities=27%  Similarity=0.402  Sum_probs=209.0

Q ss_pred             eEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccEEE
Q 007428          115 YQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV  194 (604)
Q Consensus       115 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l~l  194 (604)
                      |...+.||+|+||.||+|.+..+|..||||+++..  .......+.+|+.+|+.++||||+++++++..     ...+||
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~-----~~~~~l  163 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFES-----KNDIVL  163 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSEEEE
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEEE
Confidence            33477899999999999999999999999998642  23456778999999999999999999999854     356899


Q ss_pred             EEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee--CCCCcEEEeeccccccccCCC
Q 007428          195 VFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA--NADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       195 V~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl--~~~~~vKL~DFGla~~~~~~~  270 (604)
                      |||||+ ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||+  +.++.+||+|||+++......
T Consensus       164 v~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~  243 (373)
T 2x4f_A          164 VMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE  243 (373)
T ss_dssp             EEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence            999997 5888888654 469999999999999999999999999999999999999  667899999999998754322


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRN  350 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~  350 (604)
                      .    ....+||+.|+|||++.+  ..++.++||||||||+|||++|..||.+.+....+..+......           
T Consensus       244 ~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~-----------  306 (373)
T 2x4f_A          244 K----LKVNFGTPEFLAPEVVNY--DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD-----------  306 (373)
T ss_dssp             B----CCCCCSSCTTCCHHHHTT--CBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC-----------
T ss_pred             c----cccccCCCcEeChhhccC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-----------
Confidence            2    234579999999999876  67899999999999999999999999998876665544332111           


Q ss_pred             HHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          351 EKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       351 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                      .....++.+++.+.+||.+||+.||.+|||+.|+|+||||.+.
T Consensus       307 ----------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          307 ----------------LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             ----------------SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             ----------------CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence                            1112345678999999999999999999999999999999753


No 105
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=3.6e-47  Score=395.01  Aligned_cols=262  Identities=25%  Similarity=0.400  Sum_probs=204.7

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc------
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR------  186 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~------  186 (604)
                      ++|++++.||+|+||.||+|++..+|+.||||+++... .......+.+|+.+|+.++||||+++++++.....      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            47999999999999999999999999999999996432 23456778999999999999999999998754321      


Q ss_pred             ----------------------------------------------cCcccEEEEEeccc-ccHHHHHHhcCC---CCHH
Q 007428          187 ----------------------------------------------REFKDIYVVFELME-SDLHQVIKANDD---LTPE  216 (604)
Q Consensus       187 ----------------------------------------------~~~~~l~lV~E~~~-g~L~~~i~~~~~---l~~~  216 (604)
                                                                    .....+|+|||||. ++|.+++.....   .++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                          11234899999998 489999987653   4556


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCCCc---------ccccccccCccccc
Q 007428          217 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSA---------IFWTDYVATRWYRA  287 (604)
Q Consensus       217 ~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~---------~~~~~~~gT~~Y~A  287 (604)
                      .+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........         ......+||+.|+|
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            789999999999999999999999999999999999999999999998764432111         11244689999999


Q ss_pred             cccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCC
Q 007428          288 PELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVP  367 (604)
Q Consensus       288 PE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~  367 (604)
                      ||++.+  ..++.++|||||||++|||++|..|+..     ....+........                          
T Consensus       245 PE~~~~--~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~~~~~--------------------------  291 (332)
T 3qd2_B          245 PEQIHG--NNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVRNLKF--------------------------  291 (332)
T ss_dssp             HHHHHC--CCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHHTTCC--------------------------
T ss_pred             hHHhcC--CCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhhccCC--------------------------
Confidence            999977  6899999999999999999998766521     1111111111000                          


Q ss_pred             CCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          368 FSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       368 ~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                       ...+...++.+.+||.+||+.||.+|||+.|+|+||||+++
T Consensus       292 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~~  332 (332)
T 3qd2_B          292 -PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL  332 (332)
T ss_dssp             -CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred             -CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhcC
Confidence             01112335678999999999999999999999999999864


No 106
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=3.8e-47  Score=397.46  Aligned_cols=262  Identities=25%  Similarity=0.423  Sum_probs=216.8

Q ss_pred             CCeEEe-eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCcc
Q 007428          113 SRYQIQ-EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       113 ~~Y~i~-~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ++|.+. +.||+|+||.||+|.+..+|+.||||+++...........+.+|+.+|+.+. ||||+++++++.     ...
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-----~~~  102 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE-----NTS  102 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE-----eCC
Confidence            468887 8999999999999999999999999999765444455678899999999995 699999999984     345


Q ss_pred             cEEEEEeccc-ccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC---CCcEEEeeccccc
Q 007428          191 DIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLAR  264 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~vKL~DFGla~  264 (604)
                      .+|+|||||. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++
T Consensus       103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~  182 (327)
T 3lm5_A          103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR  182 (327)
T ss_dssp             EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred             eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence            6899999998 4888887543  57999999999999999999999999999999999999998   7899999999998


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      .......    ....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+......     
T Consensus       183 ~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----  251 (327)
T 3lm5_A          183 KIGHACE----LREIMGTPEYLAPEILNY--DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD-----  251 (327)
T ss_dssp             EC-------------CCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-----
T ss_pred             ccCCccc----cccccCCcCccCCeeecC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc-----
Confidence            6533221    244689999999999976  68999999999999999999999999987765554433322111     


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCC
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANV  412 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~  412 (604)
                                            .....+..+++.+.+||.+||+.||.+|||++++|+||||+++...
T Consensus       252 ----------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~  297 (327)
T 3lm5_A          252 ----------------------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE  297 (327)
T ss_dssp             ----------------------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTT
T ss_pred             ----------------------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccc
Confidence                                  1123345678999999999999999999999999999999987543


No 107
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=4.7e-47  Score=392.99  Aligned_cols=281  Identities=26%  Similarity=0.391  Sum_probs=206.7

Q ss_pred             CCCeEEe-eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQ-EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~-~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++. +.||+|+||.||+|.+..+++.||||++....  ......+.+|+.+|+++ +||||+++++++..     .
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-----~   83 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-----E   83 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----T
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----C
Confidence            4579995 78999999999999999999999999996532  23456788999999885 79999999999843     3


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc---EEEeecccccc
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGLARV  265 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~---vKL~DFGla~~  265 (604)
                      ..+|+|||||. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++..
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~  163 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSG  163 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred             CEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence            56999999998 699999988889999999999999999999999999999999999999998776   99999999976


Q ss_pred             ccCCCC----CcccccccccCcccccccccccc---CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q 007428          266 SFNDAP----SAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLG  338 (604)
Q Consensus       266 ~~~~~~----~~~~~~~~~gT~~Y~APE~l~~~---~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg  338 (604)
                      ......    ........+||+.|+|||++.+.   ...|+.++|||||||++|+|++|+.||.+....+.....    +
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~----~  239 (316)
T 2ac3_A          164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR----G  239 (316)
T ss_dssp             ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------
T ss_pred             cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc----c
Confidence            432211    11112345799999999998641   134788999999999999999999999876432100000    0


Q ss_pred             CCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          339 TPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       339 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                      .......    .    .....+...........+..+++.+.+||.+||..||.+|||+.|+|+||||++...
T Consensus       240 ~~~~~~~----~----~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          240 EACPACQ----N----MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             -CCHHHH----H----HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             ccchhHH----H----HHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence            0000000    0    000111111111111122457889999999999999999999999999999987643


No 108
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.5e-47  Score=401.67  Aligned_cols=267  Identities=28%  Similarity=0.445  Sum_probs=212.3

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc---CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF---EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~---~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ++|++.+.||+|+||.||+|.+..++..||||++....   ........+.+|+.+|+.++||||+++++++..     .
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~  100 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED-----E  100 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----S
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc-----C
Confidence            57999999999999999999999999999999986421   123456778999999999999999999999843     4


Q ss_pred             ccEEEEEeccc-ccHHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHH
Q 007428          190 KDIYVVFELME-SDLHQVIKA----------------------------------------NDDLTPEHYQFFLYQLLRG  228 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~----------------------------------------~~~l~~~~~~~i~~qil~a  228 (604)
                      ..+|+|||||. ++|.+++..                                        ...+++..++.++.||+.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            56899999997 689888742                                        1123677888999999999


Q ss_pred             HHHHHHCCCccccCCCCCeeeCCCC--cEEEeeccccccccCCCC-CcccccccccCccccccccccccCCCCCccCchh
Q 007428          229 LKYIHTANVFHRDLKPKNILANADC--KLKICDFGLARVSFNDAP-SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIW  305 (604)
Q Consensus       229 L~yLH~~gIiHrDLKp~NILl~~~~--~vKL~DFGla~~~~~~~~-~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIW  305 (604)
                      |.|||++||+||||||+|||++.++  .+||+|||++........ .........||+.|+|||++.+....++.++|||
T Consensus       181 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  260 (345)
T 3hko_A          181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW  260 (345)
T ss_dssp             HHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred             HHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence            9999999999999999999998776  899999999986533221 1112345689999999999865446789999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHh
Q 007428          306 SIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLER  385 (604)
Q Consensus       306 SlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~  385 (604)
                      ||||++|||++|+.||.+.+..+.+..+......                           .....+..+++.+.+||.+
T Consensus       261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~li~~  313 (345)
T 3hko_A          261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC---------------------------FENPNYNVLSPLARDLLSN  313 (345)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC---------------------------TTSGGGGGSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccc---------------------------cCCcccccCCHHHHHHHHH
Confidence            9999999999999999988765554443321110                           0111223468899999999


Q ss_pred             hcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          386 LLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       386 ~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                      ||..||.+|||+.++|+||||+++.+
T Consensus       314 ~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          314 LLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HcCCChhHCCCHHHHhcChhhccChH
Confidence            99999999999999999999988654


No 109
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=9.3e-47  Score=393.90  Aligned_cols=255  Identities=29%  Similarity=0.516  Sum_probs=212.5

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccEE
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY  193 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l~  193 (604)
                      .|...+.||+|+||.||+|.+..+|+.||||++....  ......+.+|+.+|+.++||||+++++++..     ...+|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~  118 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-----GEELW  118 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEE
Confidence            4788899999999999999999999999999986432  2345668899999999999999999999854     34689


Q ss_pred             EEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCCC
Q 007428          194 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPS  272 (604)
Q Consensus       194 lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~  272 (604)
                      +||||+. ++|.+++. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus       119 lv~e~~~~~~L~~~l~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  197 (321)
T 2c30_A          119 VLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK  197 (321)
T ss_dssp             EEECCCCSCBHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             EEEecCCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc
Confidence            9999997 57888775 457999999999999999999999999999999999999999999999999999865433222


Q ss_pred             cccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHH
Q 007428          273 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEK  352 (604)
Q Consensus       273 ~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~  352 (604)
                         ....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+....+..+...                
T Consensus       198 ---~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~----------------  256 (321)
T 2c30_A          198 ---RKSLVGTPYWMAPEVISR--SLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS----------------  256 (321)
T ss_dssp             ---BCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----------------
T ss_pred             ---cccccCCccccCHhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC----------------
Confidence               245689999999999977  67899999999999999999999999887754443332211                


Q ss_pred             HHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          353 ARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       353 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                 .+ +.......+++.+.+||.+||+.||.+|||+.|+|+||||...
T Consensus       257 -----------~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          257 -----------PP-PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             -----------SC-CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             -----------CC-CCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence                       00 0011123467889999999999999999999999999999754


No 110
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.6e-47  Score=396.97  Aligned_cols=269  Identities=25%  Similarity=0.363  Sum_probs=213.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++.... .......+.+|+.+++.++||||+++++++.... ....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~   89 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP   89 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence            4689999999999999999999999999999999975432 2334567889999999999999999999885432 1123


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      ..|+|||||+ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  169 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADS  169 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred             ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence            4699999997 699999998889999999999999999999999999999999999999999999999999999865443


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ..........+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+....            
T Consensus       170 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~------------  235 (311)
T 3ork_A          170 GNSVTQTAAVIGTAQYLSPEQARG--DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED------------  235 (311)
T ss_dssp             ------------CCTTCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC------------
T ss_pred             ccccccccccCcCcccCCHHHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC------------
Confidence            322222345679999999999977  689999999999999999999999999877654433322211            


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                     +.+.......+++.+.+||.+||+.||.+||++.++|.|+|++...
T Consensus       236 ---------------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          236 ---------------PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             ---------------CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             ---------------CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence                           1111112345788999999999999999999999999999997543


No 111
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=6.8e-47  Score=386.29  Aligned_cols=260  Identities=23%  Similarity=0.374  Sum_probs=197.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++...........+..+...++.+.||||+++++++..     ...
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-----~~~   80 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-----EGD   80 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSS
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec-----cCC
Confidence            468999999999999999999999999999999997543333333344455556788899999999999854     345


Q ss_pred             EEEEEecccccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          192 IYVVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~----~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      +|+||||++++|.+++..    ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus        81 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             EEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            899999999988777653    56899999999999999999999998 9999999999999999999999999999765


Q ss_pred             cCCCCCcccccccccCccccccccccc--cCCCCCccCchhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCChh
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGS--FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN-VVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~--~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~-~~~~l~~i~~~lg~p~~~  343 (604)
                      .....    .....||+.|+|||++..  ....++.++|||||||++|+|++|+.||.... ....+..+..        
T Consensus       161 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--------  228 (290)
T 3fme_A          161 VDDVA----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE--------  228 (290)
T ss_dssp             -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH--------
T ss_pred             ccccc----ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc--------
Confidence            43322    233479999999999631  12578999999999999999999999997633 2222111110        


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                        ...+.   .....+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       229 ------------------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          229 ------------------EPSPQ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             ------------------SCCCC---CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ------------------cCCCC---cccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence                              01111   1123568899999999999999999999999999999753


No 112
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=3.6e-47  Score=435.66  Aligned_cols=260  Identities=22%  Similarity=0.390  Sum_probs=220.4

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccC
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..++|++++.||+|+||.||+|+++.+++.||||++++.. ........+..|..+|..+ +||+|+.+++++..     
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~-----  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC-----
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe-----
Confidence            3568999999999999999999999999999999996421 1223346678899999887 69999999999843     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...+|||||||. ++|.+++...+.+++..++.|+.||+.||.|||++||+||||||+||||+.++++||+|||+|+...
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            456999999998 6999999988899999999999999999999999999999999999999999999999999998643


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....   .....+||+.|+|||++.+  ..|+.++||||||||||||++|++||.+.+..+.+..|...           
T Consensus       494 ~~~~---~~~~~~GT~~Y~APE~l~~--~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~-----------  557 (674)
T 3pfq_A          494 WDGV---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-----------  557 (674)
T ss_dssp             CTTC---CBCCCCSCSSSCCHHHHTC--CCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS-----------
T ss_pred             cCCc---ccccccCCCcccCHhhhcC--CCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC-----------
Confidence            3222   1356789999999999977  78999999999999999999999999998766555444221           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCH-----HHHhcCcccccCcC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTA-----EEALADPYFHGLAN  411 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta-----~eiL~Hp~f~~~~~  411 (604)
                                     ..  .+   ...+++.+.+||.+||++||.+||++     +||++||||+++.+
T Consensus       558 ---------------~~--~~---p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w  606 (674)
T 3pfq_A          558 ---------------NV--AY---PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  606 (674)
T ss_dssp             ---------------CC--CC---CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCH
T ss_pred             ---------------CC--CC---CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCH
Confidence                           00  11   13578999999999999999999997     99999999998754


No 113
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=6.7e-47  Score=407.58  Aligned_cols=262  Identities=27%  Similarity=0.435  Sum_probs=203.3

Q ss_pred             CCCeEEe-eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHH-HHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQ-EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLL-RLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~-~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL-~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|.+. +.||+|+||+||+|.+..+|+.||||++..       ...+.+|+.++ +.++||||+++++++.... ...
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~~  131 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLY-AGR  131 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeecc-cCC
Confidence            4578887 799999999999999999999999999853       23467899887 4558999999999874311 224


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC---CCcEEEeecccc
Q 007428          190 KDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLA  263 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~vKL~DFGla  263 (604)
                      ..+|||||||. ++|.+++....  .+++..++.|+.||+.||.|||++||+||||||+|||++.   ++.+||+|||++
T Consensus       132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence            56899999997 59999998653  5999999999999999999999999999999999999998   789999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      +......    ..+..+||+.|+|||++.+  ..|+.++||||||||+|||++|+.||.+.+....           ...
T Consensus       212 ~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----------~~~  274 (400)
T 1nxk_A          212 KETTSHN----SLTTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPG  274 (400)
T ss_dssp             EECC---------------CTTCCGGGSCC--CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-----------CCS
T ss_pred             cccCCCC----ccccCCCCCCccCHhhcCC--CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-----------cHH
Confidence            8643222    1345689999999999976  6899999999999999999999999987653110           000


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      ....+.            ..........+..+++.+.+||.+||..||.+|||+.|+|+||||.+..
T Consensus       275 ~~~~i~------------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          275 MKTRIR------------MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             HHHHHH------------HTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             HHHHHH------------cCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            000000            0001111123456899999999999999999999999999999997643


No 114
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=8.5e-47  Score=395.86  Aligned_cols=282  Identities=31%  Similarity=0.522  Sum_probs=225.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCC-cEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC------eeEEeeeecCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTG-ERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD------IVEIKHIMLPP  184 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g-~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn------Iv~l~~~~~~~  184 (604)
                      .++|++.+.||+|+||.||+|.+..++ ..||||+++..   ......+.+|+.+|+.++|++      ++.+++++.  
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~--   92 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN--   92 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE--
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee--
Confidence            468999999999999999999998877 68999999642   234567788999999998766      888888773  


Q ss_pred             CccCcccEEEEEecccccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee-------------
Q 007428          185 SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA-------------  249 (604)
Q Consensus       185 ~~~~~~~l~lV~E~~~g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl-------------  249 (604)
                         ....+|+||||++++|.+.+....  .+++..++.++.||+.||.|||++||+||||||+|||+             
T Consensus        93 ---~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  169 (355)
T 2eu9_A           93 ---FHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK  169 (355)
T ss_dssp             ---ETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred             ---eCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccc
Confidence               345689999999999988887654  69999999999999999999999999999999999999             


Q ss_pred             ------CCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCC
Q 007428          250 ------NADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPG  323 (604)
Q Consensus       250 ------~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~  323 (604)
                            +.++.+||+|||+++.....      ....+||+.|+|||++.+  ..++.++|||||||++|||++|..||.+
T Consensus       170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          170 SCEEKSVKNTSIRVADFGSATFDHEH------HTTIVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             CCCEEEESCCCEEECCCTTCEETTSC------CCSSCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccCCCcEEEeecCcccccccc------ccCCcCCCcccCCeeeec--CCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence                  56789999999999864322      234689999999999977  6899999999999999999999999999


Q ss_pred             CChHHHHHHHHhhcCCCChhHHHHHhhHHH--------------HHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCC
Q 007428          324 KNVVHQLDLMTDLLGTPSTESISRIRNEKA--------------RRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAF  389 (604)
Q Consensus       324 ~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~--------------~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~  389 (604)
                      .+..+.+..+...++.++...+........              ..++...... ...........++.+.+||.+||..
T Consensus       242 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~  320 (355)
T 2eu9_A          242 HENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP-LKSYMLQDSLEHVQLFDLMRRMLEF  320 (355)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC-GGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCc-ccccccccchhHHHHHHHHHHHhcC
Confidence            999999999999998887766544321100              0000000000 0000011122346789999999999


Q ss_pred             CCCCCCCHHHHhcCcccccCc
Q 007428          390 DPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       390 DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      ||.+|||+.|+|+||||+++.
T Consensus       321 dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          321 DPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             STTTSCCHHHHTTSGGGGGCC
T ss_pred             ChhhCcCHHHHhcChhhcCCC
Confidence            999999999999999999764


No 115
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.8e-46  Score=387.11  Aligned_cols=256  Identities=29%  Similarity=0.450  Sum_probs=214.1

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|.+.+.||+|+||.||+|.+..+|+.||||+++...  ......+.+|+.+|+.++||||+++++++..     ...+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~   81 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYES-----TTHY   81 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEEC-----SSEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhccc-----CCEE
Confidence            57999999999999999999999999999999997432  2234567899999999999999999999843     3568


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeeccccccccC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVSFN  268 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~  268 (604)
                      |+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            99999997 5999999888899999999999999999999999999999999999999   7889999999999975422


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      .     .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+....+..+....           
T Consensus       162 ~-----~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-----------  223 (304)
T 2jam_A          162 G-----IMSTACGTPGYVAPEVLAQ--KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY-----------  223 (304)
T ss_dssp             B-----TTHHHHSCCCBCCTTTBSS--CSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCC-----------
T ss_pred             C-----ccccccCCCCccChHHhcc--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-----------
Confidence            1     1234579999999999977  679999999999999999999999998877544443332210           


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                      .......+..+++.+.+||.+||..||.+|||++|+|+||||.+.
T Consensus       224 ----------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          224 ----------------YEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             ----------------CCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             ----------------CCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence                            001112335678999999999999999999999999999999864


No 116
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1e-46  Score=383.94  Aligned_cols=261  Identities=28%  Similarity=0.476  Sum_probs=216.1

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC----hhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH----VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~----~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ++|++.+.||+|+||.||+|.+..+|+.||||+++.....    ......+.+|+.+|+.++||||+++++++..     
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN-----   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC-----
Confidence            4799999999999999999999999999999998643221    1235678999999999999999999999854     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC----cEEEeecccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFGLA  263 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~----~vKL~DFGla  263 (604)
                      ...+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++    .+||+|||++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           80 KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            346899999997 69999998888999999999999999999999999999999999999999877    8999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ........    .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+....+..+......... 
T Consensus       160 ~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-  232 (283)
T 3bhy_A          160 HKIEAGNE----FKNIFGTPEFVAPEIVNY--EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE-  232 (283)
T ss_dssp             EECC------------CCCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCH-
T ss_pred             eeccCCCc----ccccCCCcCccCcceecC--CCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcc-
Confidence            86533221    244579999999999876  67899999999999999999999999987765554443322111111 


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                                ..++.+++.+.+||.+||..||.+|||+.++|+||||+.+..
T Consensus       233 --------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          233 --------------------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             --------------------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             --------------------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence                                      112456788999999999999999999999999999987543


No 117
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.4e-46  Score=397.60  Aligned_cols=256  Identities=26%  Similarity=0.397  Sum_probs=213.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC-hhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..+|.+++.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+|+.++||||+++++++..     ..
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~  127 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EH  127 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CC
Confidence            35699999999999999999999999999999998643222 2334678899999999999999999999853     34


Q ss_pred             cEEEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||.|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus       128 ~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-  206 (348)
T 1u5q_A          128 TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-  206 (348)
T ss_dssp             EEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred             eEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence            6899999999999888854 56799999999999999999999999999999999999999999999999999976432 


Q ss_pred             CCCcccccccccCccccccccccc-cCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~-~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                            ....+||+.|+|||++.+ ....++.++||||||||+|||++|++||.+.+....+..+..             
T Consensus       207 ------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~-------------  267 (348)
T 1u5q_A          207 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-------------  267 (348)
T ss_dssp             ------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-------------
T ss_pred             ------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-------------
Confidence                  134689999999999853 125789999999999999999999999988775544332221             


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                   ...+.   .....+++.+.+||.+||+.||.+|||++++|+||||..
T Consensus       268 -------------~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          268 -------------NESPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             -------------SCCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             -------------cCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence                         01111   112346788999999999999999999999999999965


No 118
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=1.2e-46  Score=404.28  Aligned_cols=260  Identities=28%  Similarity=0.377  Sum_probs=207.1

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC--CCCeeEEeeeecCCCccCcc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR--HPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~--HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .+|++++.||+|+||.||+|.+.. ++.||||++............+.+|+.+|+.|.  ||||+++++++...     .
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-----~  129 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----Q  129 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----S
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-----C
Confidence            469999999999999999999865 999999999754444556678899999999997  59999999998543     4


Q ss_pred             cEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          191 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      .+|||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||+++......
T Consensus       130 ~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          130 YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             EEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred             EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence            599999988889999999888999999999999999999999999999999999999995 6899999999998654332


Q ss_pred             CCcccccccccCcccccccccccc---------CCCCCccCchhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhhcCCC
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNV-VHQLDLMTDLLGTP  340 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~---------~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~-~~~l~~i~~~lg~p  340 (604)
                      .. ......+||+.|+|||++.+.         ...|+.++||||||||||||++|++||.+... ...+..+.      
T Consensus       209 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~------  281 (390)
T 2zmd_A          209 TS-VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------  281 (390)
T ss_dssp             ------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH------
T ss_pred             cc-ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh------
Confidence            21 123456899999999998641         13689999999999999999999999976432 11111111      


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                          .......+   ....++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       282 --------------------~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          282 --------------------DPNHEIEF---PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             --------------------CTTSCCCC---CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             --------------------CccccCCC---CccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence                                00111111   12246789999999999999999999999999999753


No 119
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=4.3e-48  Score=412.68  Aligned_cols=254  Identities=17%  Similarity=0.197  Sum_probs=201.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccc-cCChhHHHHHHHHHH---HHHHcCCCCeeEEeeeec-----
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDV-FEHVSDATRILREIK---LLRLLRHPDIVEIKHIML-----  182 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~-~~~~~~~~~~~~Ei~---iL~~l~HpnIv~l~~~~~-----  182 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++... .........+.+|+.   +|+.++|||||++++.+.     
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46899999999999999999999999999999998643 223345677889995   555567999999984443     


Q ss_pred             --CCCc-------cCc-----ccEEEEEecccccHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHCCCcccc
Q 007428          183 --PPSR-------REF-----KDIYVVFELMESDLHQVIKANDDLTP-------EHYQFFLYQLLRGLKYIHTANVFHRD  241 (604)
Q Consensus       183 --~~~~-------~~~-----~~l~lV~E~~~g~L~~~i~~~~~l~~-------~~~~~i~~qil~aL~yLH~~gIiHrD  241 (604)
                        ....       .+.     ...|||||||+|+|.+++...+.+++       ..+..|+.||+.||.|||++||+|||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  231 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  231 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence              2210       000     13799999999999999987665666       77888999999999999999999999


Q ss_pred             CCCCCeeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCC-----------CCCccCchhhHHHH
Q 007428          242 LKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFS-----------KYTPAIDIWSIGCI  310 (604)
Q Consensus       242 LKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~-----------~~~~k~DIWSlGvi  310 (604)
                      |||+|||++.++.+||+|||+|+....      .....+| +.|+|||++.+  .           .|+.++|||||||+
T Consensus       232 ikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~--~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          232 LRPVDIVLDQRGGVFLTGFEHLVRDGA------RVVSSVS-RGFEPPELEAR--RATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTC------EEECCCC-TTCCCHHHHHH--HTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             CCHHHEEEcCCCCEEEEechhheecCC------cccCCCC-cCccChhhhcc--cccccccccccccCChhhhHHHHHHH
Confidence            999999999999999999999985321      2345678 99999999876  4           68999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCC
Q 007428          311 FAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFD  390 (604)
Q Consensus       311 l~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~D  390 (604)
                      ||||++|+.||.+.+....+.                           .        .....+.+++.+.+||.+||..|
T Consensus       303 l~elltg~~Pf~~~~~~~~~~---------------------------~--------~~~~~~~~~~~~~~li~~~L~~d  347 (377)
T 3byv_A          303 IYWIWCADLPITKDAALGGSE---------------------------W--------IFRSCKNIPQPVRALLEGFLRYP  347 (377)
T ss_dssp             HHHHHHSSCCC------CCSG---------------------------G--------GGSSCCCCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCcccccccchh---------------------------h--------hhhhccCCCHHHHHHHHHHcCCC
Confidence            999999999997654211100                           0        00122567899999999999999


Q ss_pred             CCCCCCHHHHhcCcccccC
Q 007428          391 PKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       391 P~~Rpta~eiL~Hp~f~~~  409 (604)
                      |.+|||+.|+|+||||+.+
T Consensus       348 p~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          348 KEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             GGGCCCHHHHHTSHHHHHH
T ss_pred             chhCCCHHHHhhChHHHHH
Confidence            9999999999999999764


No 120
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=3.1e-46  Score=391.80  Aligned_cols=263  Identities=29%  Similarity=0.430  Sum_probs=220.7

Q ss_pred             ccCCCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          108 EYGEASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       108 ~~~~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ......+|.+.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++..   
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---  112 (335)
T 2owb_A           36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED---  112 (335)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred             CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence            3345678999999999999999999999999999999986432 233456778899999999999999999999843   


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                        ...+|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       113 --~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  190 (335)
T 2owb_A          113 --NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK  190 (335)
T ss_dssp             --SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             --CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCcee
Confidence              356899999998 68999998888999999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      .......   .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+....+.+..+..          
T Consensus       191 ~~~~~~~---~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----------  255 (335)
T 2owb_A          191 VEYDGER---KKVLCGTPNYIAPEVLSK--KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK----------  255 (335)
T ss_dssp             CCSTTCC---BCCCCSCCSSCCHHHHHT--SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH----------
T ss_pred             cccCccc---ccccCCCccccCHHHhcc--CCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhc----------
Confidence            5432221   244679999999999877  6789999999999999999999999988765433322211          


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                      ...     .....+++.+.+||.+||..||.+|||++|+|+||||.....
T Consensus       256 ----------------~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          256 ----------------NEY-----SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             ----------------TCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             ----------------CCC-----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence                            000     011346788999999999999999999999999999986543


No 121
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.2e-47  Score=426.32  Aligned_cols=262  Identities=26%  Similarity=0.408  Sum_probs=215.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++.+.. ........+.+|+.+|+.++||||+++++++..     ..
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~  257 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KD  257 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----CC
Confidence            467999999999999999999999999999999986421 112234567899999999999999999999844     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          191 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      .+|+|||||. |+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++...
T Consensus       258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecc
Confidence            6999999997 69999998654  49999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....    ....+||+.|+|||++.+  ..|+.++|||||||++|||++|++||.+.+.......+              
T Consensus       338 ~~~~----~~~~~GT~~Y~APEvl~~--~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i--------------  397 (576)
T 2acx_A          338 EGQT----IKGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV--------------  397 (576)
T ss_dssp             TTCC----EECCCSCGGGCCHHHHTT--CEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH--------------
T ss_pred             cCcc----ccccCCCccccCHHHHcC--CCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH--------------
Confidence            3221    245689999999999987  67999999999999999999999999875421111101              


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-----CHHHHhcCcccccCcC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-----TAEEALADPYFHGLAN  411 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-----ta~eiL~Hp~f~~~~~  411 (604)
                            ...+...    +..+   ...+++.+.+||.+||+.||.+||     +++|+++||||+++.+
T Consensus       398 ------~~~i~~~----~~~~---p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          398 ------ERLVKEV----PEEY---SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             ------HHHHHHC----CCCC---CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             ------HHHhhcc----cccC---CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCH
Confidence                  0001111    1111   145789999999999999999999     8999999999997643


No 122
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2.1e-46  Score=380.73  Aligned_cols=251  Identities=22%  Similarity=0.286  Sum_probs=206.1

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ++|++.+.||+|+||.||+|.+..+++.||||+++...........+.+|+.++..+ +||||+++++++..     ...
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-----~~~   85 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-----DDH   85 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----TTE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----CCe
Confidence            579999999999999999999999999999999976555555677889999999999 89999999999843     346


Q ss_pred             EEEEEeccc-ccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC--------------
Q 007428          192 IYVVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD--------------  252 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~----~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~--------------  252 (604)
                      +|+||||++ ++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||++.+              
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred             EEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence            899999997 4999999765    679999999999999999999999999999999999999844              


Q ss_pred             -----CcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChH
Q 007428          253 -----CKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVV  327 (604)
Q Consensus       253 -----~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~  327 (604)
                           ..+||+|||++......       ....||+.|+|||++.+. ..++.++|||||||++|+|++|.+||......
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~  237 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQEN-YTHLPKADIFALALTVVCAAGAEPLPRNGDQW  237 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTC-CTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH
T ss_pred             ccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCC-CCCCchhhHHHHHHHHHHHhcCCCCCcchhHH
Confidence                 47999999999865322       224699999999998762 36678999999999999999999877543221


Q ss_pred             HHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          328 HQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       328 ~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                      ..   +.                       .   ..    .......+++.+.+||.+||..||.+|||+.|+|+||||.
T Consensus       238 ~~---~~-----------------------~---~~----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          238 HE---IR-----------------------Q---GR----LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             HH---HH-----------------------T---TC----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             HH---HH-----------------------c---CC----CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence            11   10                       0   00    0112235789999999999999999999999999999997


Q ss_pred             cC
Q 007428          408 GL  409 (604)
Q Consensus       408 ~~  409 (604)
                      +.
T Consensus       285 ~~  286 (289)
T 1x8b_A          285 SA  286 (289)
T ss_dssp             --
T ss_pred             hh
Confidence            53


No 123
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=1.8e-46  Score=383.18  Aligned_cols=257  Identities=23%  Similarity=0.390  Sum_probs=215.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..++..||||++..... .......+.+|+.+++.++||||+++++++..     ..
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD-----RK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc-----CC
Confidence            3589999999999999999999999999999999854211 11224568899999999999999999999853     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL  167 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred             EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence            6899999997 599999988889999999999999999999999999999999999999999999999999998754322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      .     .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+.......+...             
T Consensus       168 ~-----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-------------  227 (284)
T 2vgo_A          168 R-----RRTMCGTLDYLPPEMIEG--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------------  227 (284)
T ss_dssp             C-----BCCCCSCGGGCCHHHHTT--CCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-------------
T ss_pred             c-----cccccCCCCcCCHHHhcc--CCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc-------------
Confidence            1     234689999999999887  67899999999999999999999999877654433222110             


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                   ..     ...+.+++.+.+||.+||..||.+|||++++|+||||+....
T Consensus       228 -------------~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          228 -------------DL-----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             -------------CC-----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             -------------cc-----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence                         00     011346889999999999999999999999999999986543


No 124
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=5.2e-46  Score=395.49  Aligned_cols=259  Identities=28%  Similarity=0.492  Sum_probs=214.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh------hHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV------SDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~------~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      ++|++.+.||+|+||.||+|.+..+|+.||||++.......      .....+.+|+.+|+.+ .||||+++++++..  
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--  171 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES--  171 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB--
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee--
Confidence            57999999999999999999999999999999986432211      1245678999999999 79999999999843  


Q ss_pred             ccCcccEEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          186 RREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                         ...+|+|||||.+ +|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.
T Consensus       172 ---~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          172 ---SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSC  248 (365)
T ss_dssp             ---SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             ---CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence               4568999999985 899999888889999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCcccccccccCcccccccccccc----CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      .......    ....+||+.|+|||++.+.    ...|+.++|||||||++|+|++|..||.+.+....+..+......+
T Consensus       249 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~  324 (365)
T 2y7j_A          249 HLEPGEK----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF  324 (365)
T ss_dssp             ECCTTCC----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             ccCCCcc----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            6543221    2456899999999988642    1358889999999999999999999998877655444433211111


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                      ..                           ..+...++.+.+||.+||..||.+|||+.++|+||||+
T Consensus       325 ~~---------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          325 SS---------------------------PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             CH---------------------------HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             CC---------------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            10                           11235678899999999999999999999999999996


No 125
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=3.8e-47  Score=411.86  Aligned_cols=260  Identities=32%  Similarity=0.529  Sum_probs=202.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC------hhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH------VSDATRILREIKLLRLLRHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~------~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~  185 (604)
                      .++|.+.+.||+|+||.||+|.+..+++.||||++......      ......+.+|+.+|+.++||||+++++++..  
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--  211 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA--  211 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES--
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec--
Confidence            46899999999999999999999999999999998643211      1122347899999999999999999998732  


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC---cEEEeecc
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFG  261 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~vKL~DFG  261 (604)
                          ..+|+|||||. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||
T Consensus       212 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          212 ----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             ----SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             ----CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence                34799999997 58999888888999999999999999999999999999999999999997544   59999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccc-cCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQL-DLMTDLLGT  339 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l-~~i~~~lg~  339 (604)
                      +++......    .....+||+.|+|||++.+ ....|+.++|||||||++|+|++|++||.+......+ ..+...   
T Consensus       288 ~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~---  360 (419)
T 3i6u_A          288 HSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG---  360 (419)
T ss_dssp             TTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTT---
T ss_pred             cceecCCCc----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcC---
Confidence            998653222    2345689999999999853 1256888999999999999999999999875432111 111110   


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                              ........+..+++.+.+||.+||+.||.+|||++|+|+||||++
T Consensus       361 ------------------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          361 ------------------------KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             ------------------------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ------------------------CCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence                                    000111223457889999999999999999999999999999975


No 126
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=2.3e-46  Score=385.55  Aligned_cols=267  Identities=23%  Similarity=0.408  Sum_probs=215.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc--CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF--EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~--~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++.+.||+|+||.||+|.+..++..||||+++...  ........+.+|+.+|+.++||||+++++++...   ..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~   80 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---EK   80 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC---CC
Confidence            468999999999999999999999999999999996432  1123456789999999999999999999998542   23


Q ss_pred             ccEEEEEecccccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          190 KDIYVVFELMESDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ..+|+|||||.++|.+++..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        81 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           81 QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             -CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            46899999999888888875  3579999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ..... .......||+.|+|||++.+....++.++|||||||++|+|++|+.||.+.+.......+...           
T Consensus       161 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----------  228 (305)
T 2wtk_C          161 PFAAD-DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG-----------  228 (305)
T ss_dssp             TTCSS-CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC-----------
T ss_pred             ccccc-cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC-----------
Confidence            32222 122456799999999998763233477999999999999999999999887654433322110           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCCC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANVD  413 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~~  413 (604)
                                     ..     .....+++.+.+||.+||..||.+|||+.|+++||||+......
T Consensus       229 ---------------~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~  274 (305)
T 2wtk_C          229 ---------------SY-----AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA  274 (305)
T ss_dssp             ---------------CC-----CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-
T ss_pred             ---------------CC-----CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCc
Confidence                           00     11135688999999999999999999999999999998765443


No 127
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=5.3e-46  Score=381.49  Aligned_cols=262  Identities=29%  Similarity=0.430  Sum_probs=219.7

Q ss_pred             CCCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          110 GEASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       110 ~~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++..     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----   86 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED-----   86 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----
Confidence            34578999999999999999999999999999999986533 233456678899999999999999999999843     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...+|+||||++ ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        87 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A           87 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            356899999998 6899999888899999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      .....   .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+....+....+..            
T Consensus       167 ~~~~~---~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~------------  229 (294)
T 2rku_A          167 YDGER---KKVLCGTPNYIAPEVLSK--KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK------------  229 (294)
T ss_dssp             STTCC---BCCCCSCCSSCCHHHHTT--SCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT------------
T ss_pred             cCccc---cccccCCCCcCCcchhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh------------
Confidence            32221   244679999999999876  6789999999999999999999999988765433222211            


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcCC
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLANV  412 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~~  412 (604)
                                    ...     .....+++.+.+||.+||..||.+|||++|+|+||||.....+
T Consensus       230 --------------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  275 (294)
T 2rku_A          230 --------------NEY-----SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP  275 (294)
T ss_dssp             --------------TCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             --------------ccC-----CCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcC
Confidence                          000     0113467889999999999999999999999999999865443


No 128
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=4.4e-47  Score=403.81  Aligned_cols=269  Identities=17%  Similarity=0.135  Sum_probs=194.7

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHc--CCCCeeEEeeeec-------
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLL--RHPDIVEIKHIML-------  182 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l--~HpnIv~l~~~~~-------  182 (604)
                      ..|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.|  +||||++++..+.       
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            359999999999999999999999999999999976433 233456677886655555  5999888653332       


Q ss_pred             CCCc------------cCcccEEEEEecccccHHHHHHhc-CCCCHHHH------HHHHHHHHHHHHHHHHCCCccccCC
Q 007428          183 PPSR------------REFKDIYVVFELMESDLHQVIKAN-DDLTPEHY------QFFLYQLLRGLKYIHTANVFHRDLK  243 (604)
Q Consensus       183 ~~~~------------~~~~~l~lV~E~~~g~L~~~i~~~-~~l~~~~~------~~i~~qil~aL~yLH~~gIiHrDLK  243 (604)
                      ....            .....+|||||||+++|.+++... ..+.+...      ..++.||+.||.|||++||+|||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDik  221 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFT  221 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCC
Confidence            1110            011458999999999999999764 34555555      5777999999999999999999999


Q ss_pred             CCCeeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCC
Q 007428          244 PKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPG  323 (604)
Q Consensus       244 p~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~  323 (604)
                      |+|||++.++.+||+|||+|+.....      .....+|+.|+|||++.+....|+.++|||||||+||||++|+.||.+
T Consensus       222 p~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  295 (371)
T 3q60_A          222 PDNLFIMPDGRLMLGDVSALWKVGTR------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL  295 (371)
T ss_dssp             GGGEEECTTSCEEECCGGGEEETTCE------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred             HHHEEECCCCCEEEEecceeeecCCC------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999864211      124567799999999865334689999999999999999999999987


Q ss_pred             CChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          324 KNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       324 ~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ......             ..+..        . ..............++.+++.+.+||.+||+.||.+|||+.++|+|
T Consensus       296 ~~~~~~-------------~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  353 (371)
T 3q60_A          296 VTPGIK-------------GSWKR--------P-SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET  353 (371)
T ss_dssp             CCTTCT-------------TCCCB--------C-CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred             cCcccc-------------cchhh--------h-hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            642100             00000        0 0000000111112235789999999999999999999999999999


Q ss_pred             cccccC
Q 007428          404 PYFHGL  409 (604)
Q Consensus       404 p~f~~~  409 (604)
                      |||+.+
T Consensus       354 p~f~~~  359 (371)
T 3q60_A          354 PEFLQL  359 (371)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999864


No 129
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=3.1e-46  Score=384.75  Aligned_cols=265  Identities=28%  Similarity=0.350  Sum_probs=211.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..++..||||++.... ........+.+|+.+++.++||||+++++++.     ...
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~   84 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE-----EDD   84 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE-----CSS
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee-----eCC
Confidence            468999999999999999999999999999999985432 23344577899999999999999999999984     345


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        85 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A           85 CYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             eEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            6899999997 599999998889999999999999999999999999999999999999999999999999999865332


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ...  .....+||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+..........              
T Consensus       165 ~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~--------------  226 (294)
T 4eqm_A          165 SLT--QTNHVLGTVQYFSPEQAKG--EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ--------------  226 (294)
T ss_dssp             ------------CCSSCCHHHHHT--CCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHS--------------
T ss_pred             ccc--ccCccccCccccCHhHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhh--------------
Confidence            211  1234679999999999877  6789999999999999999999999998775443221111              


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                  ...+.......+.+++.+.+||.+||..||.+||+..+.+.+.|..-+..
T Consensus       227 ------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          227 ------------DSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             ------------SCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             ------------ccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence                        11111111223457889999999999999999997777777777665443


No 130
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=4.3e-47  Score=399.19  Aligned_cols=249  Identities=24%  Similarity=0.380  Sum_probs=209.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh------hHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV------SDATRILREIKLLRLLRHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~------~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++......      .....+.+|+.+|+.++||||+++++++.   
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~---   99 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE---   99 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE---
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe---
Confidence            358999999999999999999999999999999986532111      12335678999999999999999999984   


Q ss_pred             ccCcccEEEEEeccc-c-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccc
Q 007428          186 RREFKDIYVVFELME-S-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA  263 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla  263 (604)
                        ....+|+||||+. | +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       100 --~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a  177 (335)
T 3dls_A          100 --NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA  177 (335)
T ss_dssp             --CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred             --eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence              3456899999986 4 89999998889999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCC-CccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~-~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      ........    ....+||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+....               
T Consensus       178 ~~~~~~~~----~~~~~gt~~y~aPE~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------  236 (335)
T 3dls_A          178 AYLERGKL----FYTFCGTIEYCAPEVLMG--NPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------  236 (335)
T ss_dssp             EECCTTCC----BCEECSCGGGCCHHHHTT--CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------
T ss_pred             eECCCCCc----eeccCCCccccChhhhcC--CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------
Confidence            86543322    245689999999999876  444 88999999999999999999999652110               


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                       .....     .....+++.+.+||.+||..||.+|||++++|+||||++
T Consensus       237 -----------------~~~~~-----~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          237 -----------------VEAAI-----HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             -----------------TTTCC-----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             -----------------Hhhcc-----CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence                             00000     011236889999999999999999999999999999975


No 131
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=7.1e-46  Score=380.58  Aligned_cols=263  Identities=28%  Similarity=0.440  Sum_probs=217.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC---C----hhHHHHHHHHHHHHHHcC-CCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE---H----VSDATRILREIKLLRLLR-HPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~---~----~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++....   .    ......+.+|+.+|+.+. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            4689999999999999999999999999999999864321   0    122456789999999996 9999999999843


Q ss_pred             CCccCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccc
Q 007428          184 PSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL  262 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGl  262 (604)
                           ...+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        96 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A           96 -----NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             -----SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             -----CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence                 456899999998 69999998888999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccCcccccccccccc----CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q 007428          263 ARVSFNDAPSAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLG  338 (604)
Q Consensus       263 a~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg  338 (604)
                      +........    .....||+.|+|||++.+.    ...++.++|||||||++|+|++|..||.+.+.......+.... 
T Consensus       171 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-  245 (298)
T 1phk_A          171 SCQLDPGEK----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN-  245 (298)
T ss_dssp             CEECCTTCC----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-
T ss_pred             hhhcCCCcc----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCC-
Confidence            986543222    2456899999999987521    2468889999999999999999999998876544433332210 


Q ss_pred             CCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          339 TPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       339 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                                .......++.+++.+.+||.+||..||.+|||+.|+|+||||++..
T Consensus       246 --------------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          246 --------------------------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             --------------------------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             --------------------------cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence                                      0011122345788999999999999999999999999999998754


No 132
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=1.5e-46  Score=397.21  Aligned_cols=284  Identities=22%  Similarity=0.339  Sum_probs=217.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..++..||+|++.... .......+.+|+.+|+.++||||+++++++..     ...
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~  105 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGE  105 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TTE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CCE
Confidence            468999999999999999999999999999999987532 33445778999999999999999999999853     356


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+|||||. ++|.+++...+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence            899999997 59999999888999999999999999999999996 9999999999999999999999999999754322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc-CCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLL-GTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~l-g~p~~~~i~~~  348 (604)
                      .     .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+.... +.+........
T Consensus       186 ~-----~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3eqc_A          186 M-----ANSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR  258 (360)
T ss_dssp             C---------CCCCTTCCHHHHTT--CCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------
T ss_pred             c-----ccCCCCCCCeECHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcc
Confidence            1     234689999999999987  689999999999999999999999999877544332221111 11100000000


Q ss_pred             h--------------hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          349 R--------------NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       349 ~--------------~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      .              .......+.......+..  .....+++.+.+||.+||.+||.+|||++|+|+||||+...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             ---------------CCCHHHHHHHHHHSCCCC--CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             cCCCcccccccCCCCcccchhhhhHHhccCCCC--CCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence            0              000000111111111111  11234688999999999999999999999999999998653


No 133
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=3.6e-46  Score=394.90  Aligned_cols=286  Identities=24%  Similarity=0.363  Sum_probs=223.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-----------CCCeeEEeee
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-----------HPDIVEIKHI  180 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-----------HpnIv~l~~~  180 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++..   .......+.+|+.+++.+.           ||||++++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~   94 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   94 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence            4689999999999999999999999999999999863   2234566789999999886           8999999999


Q ss_pred             ecCCCccCcccEEEEEecccccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeC------C
Q 007428          181 MLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILAN------A  251 (604)
Q Consensus       181 ~~~~~~~~~~~l~lV~E~~~g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~------~  251 (604)
                      +.... .....+++||||++++|.+++...  ..+++..+..++.||+.||.|||++ ||+||||||+|||++      .
T Consensus        95 ~~~~~-~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~  173 (373)
T 1q8y_A           95 FNHKG-PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPEN  173 (373)
T ss_dssp             EEEEE-TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTT
T ss_pred             hhccC-CCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcC
Confidence            85432 123468999999998999999763  4599999999999999999999998 999999999999994      4


Q ss_pred             CCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCC------
Q 007428          252 DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN------  325 (604)
Q Consensus       252 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~------  325 (604)
                      .+.+||+|||++......      ....+||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.+      
T Consensus       174 ~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  245 (373)
T 1q8y_A          174 LIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLG--APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK  245 (373)
T ss_dssp             EEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHT--CCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred             cceEEEcccccccccCCC------CCCCCCCccccCcHHHhC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence            458999999999765322      234589999999999987  679999999999999999999999998765      


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCC-------------CCCCCCCHHHHHHHHhhcCCCCC
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFS-------------HKFPNADPLALHLLERLLAFDPK  392 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~~~s~~~~dLI~~~L~~DP~  392 (604)
                      ...++..+...+|.++...+......  ..++............             ......++.+.+||.+||+.||.
T Consensus       246 ~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  323 (373)
T 1q8y_A          246 DDDHIAQIIELLGELPSYLLRNGKYT--RTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPR  323 (373)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHCTTH--HHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTT
T ss_pred             hHHHHHHHHHhcCCCCHHHHhccchh--hhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcc
Confidence            45677788888898877655433221  1111110000000000             01123456789999999999999


Q ss_pred             CCCCHHHHhcCcccccCcC
Q 007428          393 DRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       393 ~Rpta~eiL~Hp~f~~~~~  411 (604)
                      +|||++|+|+||||++...
T Consensus       324 ~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          324 KRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             TCBCHHHHHTCGGGTTCTT
T ss_pred             ccCCHHHHhhChhhhcccC
Confidence            9999999999999987544


No 134
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=3e-46  Score=379.88  Aligned_cols=257  Identities=27%  Similarity=0.470  Sum_probs=190.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++..     ..
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~   84 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED-----SN   84 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC-----SS
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc-----CC
Confidence            4579999999999999999999999999999999864211 11224678899999999999999999999844     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+|+||||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            6899999997 5899988765 5799999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ....   .....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||........+..+               
T Consensus       165 ~~~~---~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---------------  224 (278)
T 3cok_A          165 PHEK---HYTLCGTPNYISPEIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV---------------  224 (278)
T ss_dssp             --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C---------------
T ss_pred             CCCc---ceeccCCCCcCCcchhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH---------------
Confidence            2211   234579999999999876  67899999999999999999999999875532211100               


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                 .....     .....+++.+.+||.+||..||.+|||++++|+||||...
T Consensus       225 -----------~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          225 -----------VLADY-----EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             -----------CSSCC-----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             -----------hhccc-----CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence                       00000     1113468899999999999999999999999999999753


No 135
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=3.2e-46  Score=416.55  Aligned_cols=263  Identities=24%  Similarity=0.346  Sum_probs=214.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|+++.+|+.||||++.+... .......+.+|+.+|+.++||||+++++++..     ..
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~  258 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-----KT  258 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----CC
Confidence            4689999999999999999999999999999999964321 11234668899999999999999999999844     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          191 DIYVVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~----~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      .+|+|||||. ++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++.
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~  338 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE  338 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence            6999999998 6899998763    3699999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      .......   ....+||+.|+|||++.+  ..|+.++||||||||+|||++|++||.+.+.......+.           
T Consensus       339 ~~~~~~~---~~~~~GT~~Y~APE~l~~--~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~-----------  402 (543)
T 3c4z_A          339 LKAGQTK---TKGYAGTPGFMAPELLLG--EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-----------  402 (543)
T ss_dssp             CCTTCCC---BCCCCSCTTTSCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHH-----------
T ss_pred             ccCCCcc---cccccCCccccChhhhcC--CCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHH-----------
Confidence            5433221   244689999999999987  689999999999999999999999998754211000000           


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-----HHHHhcCcccccCcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-----AEEALADPYFHGLAN  411 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-----a~eiL~Hp~f~~~~~  411 (604)
                              ...+.   ..  ..   ....+++.+.+||.+||+.||.+||+     ++++++||||+++.+
T Consensus       403 --------~~i~~---~~--~~---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          403 --------QRVLE---QA--VT---YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             --------HHHHH---CC--CC---CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             --------HHHhh---cc--cC---CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence                    00000   00  11   11357899999999999999999996     589999999998653


No 136
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=5.2e-46  Score=380.61  Aligned_cols=260  Identities=33%  Similarity=0.539  Sum_probs=216.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++..     ...
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~   95 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-----SSS   95 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SSE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC-----CCe
Confidence            358999999999999999999999999999999997554444556788999999999999999999999844     346


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC---CcEEEeecccccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~---~~vKL~DFGla~~~~  267 (604)
                      +|+||||+. ++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.+   +.+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            899999997 6899999888889999999999999999999999999999999999999764   469999999998654


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....    .....||+.|+|||++.+   .++.++|||||||++|+|++|..||.+.+....+..+....          
T Consensus       176 ~~~~----~~~~~~~~~y~aPE~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------  238 (287)
T 2wei_A          176 QNTK----MKDRIGTAYYIAPEVLRG---TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK----------  238 (287)
T ss_dssp             CCSS----CSCHHHHHTTCCHHHHTT---CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----------
T ss_pred             CCCc----cccccCcccccChHHhcC---CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Confidence            3221    234568999999999865   58999999999999999999999998877554443332210          


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                      ... ....+..+++.+.+||.+||..||.+|||+.|+|+||||+.+.
T Consensus       239 ----------------~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          239 ----------------YAF-DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             ----------------CCC-CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             ----------------CCC-CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence                            000 0112345788999999999999999999999999999998653


No 137
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.9e-46  Score=377.88  Aligned_cols=261  Identities=28%  Similarity=0.411  Sum_probs=212.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      ++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++.     .....
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~   80 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ   80 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCEE
Confidence            479999999999999999999999999999999864322 234567889999999999999999999984     34568


Q ss_pred             EEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCC
Q 007428          193 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAP  271 (604)
Q Consensus       193 ~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  271 (604)
                      |+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  160 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             EEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence            99999998 58999887777899999999999999999999999999999999999999999999999999976432221


Q ss_pred             CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhH
Q 007428          272 SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNE  351 (604)
Q Consensus       272 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~  351 (604)
                      . .......||+.|+|||++.+. ..++.++|||||||++|+|++|..||.+........              .     
T Consensus       161 ~-~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--------------~-----  219 (276)
T 2yex_A          161 E-RLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--------------S-----  219 (276)
T ss_dssp             E-CCBCCCCSCGGGCCGGGGTCS-SBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH--------------H-----
T ss_pred             h-hcccCCccccCccChHHHhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH--------------H-----
Confidence            1 113456899999999998762 234778999999999999999999998755321110              0     


Q ss_pred             HHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          352 KARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       352 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                         .+...   .   .....+..+++.+.+||.+||..||.+|||++|+++||||+..
T Consensus       220 ---~~~~~---~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          220 ---DWKEK---K---TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             ---HHHTT---C---TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ---Hhhhc---c---cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence               00000   0   0011234578899999999999999999999999999999864


No 138
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=4.6e-46  Score=390.16  Aligned_cols=261  Identities=24%  Similarity=0.413  Sum_probs=209.4

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHH-HHHcCCCCeeEEeeeecCCCccCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKL-LRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~i-L~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ..++|++++.||+|+||.||+|.+..+|+.||||+++..... .....+..|+.+ ++.++||||+++++++...     
T Consensus        49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~-----  122 (340)
T 3an0_A           49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----  122 (340)
T ss_dssp             CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC-HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-----
T ss_pred             ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc-HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-----
Confidence            356899999999999999999999999999999999754333 334556666666 7788999999999998543     


Q ss_pred             ccEEEEEecccccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          190 KDIYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~----~~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      ..+|+|||||+++|.+++.    ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus       123 ~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  202 (340)
T 3an0_A          123 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG  202 (340)
T ss_dssp             SCEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred             CcEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence            4689999999999888776    356899999999999999999999997 99999999999999999999999999997


Q ss_pred             cccCCCCCcccccccccCcccccccccccc--CCCCCccCchhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCC
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN-VVHQLDLMTDLLGTPS  341 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~--~~~~~~k~DIWSlGvil~eLltG~~PF~~~~-~~~~l~~i~~~lg~p~  341 (604)
                      .....    .......||+.|+|||++.+.  ...++.++||||||||+|||++|+.||.+.. ....+..+..      
T Consensus       203 ~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~------  272 (340)
T 3an0_A          203 YLVDS----VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE------  272 (340)
T ss_dssp             HHSCH----HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH------
T ss_pred             ecccc----cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhc------
Confidence            65321    112335899999999997431  2468999999999999999999999998643 2222211110      


Q ss_pred             hhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          342 TESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       342 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                       .   ..+.   .....+++.+.+||.+||..||.+|||+.|+|+||||....
T Consensus       273 -----------------~---~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  318 (340)
T 3an0_A          273 -----------------E---PSPQ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  318 (340)
T ss_dssp             -----------------S---CCCC---CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred             -----------------C---CCCC---CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence                             0   0000   01124678899999999999999999999999999997643


No 139
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-46  Score=398.85  Aligned_cols=265  Identities=23%  Similarity=0.379  Sum_probs=210.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC---CCCcEEEEEEeccccC--ChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT---HTGERVAIKKINDVFE--HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~---~~g~~vAIK~i~~~~~--~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      ..+|++++.||+|+||.||+|++.   .+|+.||||+++....  .......+.+|+.+|+.+ .||||+++++++..  
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--  130 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--  130 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence            358999999999999999999984   5899999999864221  112234567899999999 69999999998843  


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                         ...+|+|||||. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus       131 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          131 ---ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             ---TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             ---CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence               356899999998 5999999888899999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      .......  ......+||+.|+|||++.+....++.++||||||||||||++|+.||...........+.          
T Consensus       208 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~----------  275 (355)
T 1vzo_A          208 EFVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS----------  275 (355)
T ss_dssp             ECCGGGG--GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH----------
T ss_pred             ecccCCC--CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH----------
Confidence            6432221  1234568999999999987533468899999999999999999999997644211111110          


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-----CHHHHhcCcccccCc
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-----TAEEALADPYFHGLA  410 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-----ta~eiL~Hp~f~~~~  410 (604)
                               .....   ...     .....+++.+.+||.+||..||.+||     |++|+++||||..+.
T Consensus       276 ---------~~~~~---~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          276 ---------RRILK---SEP-----PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             ---------HHHHH---CCC-----CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             ---------HHHhc---cCC-----CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence                     00010   011     11245688999999999999999999     999999999998764


No 140
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=8.8e-46  Score=375.70  Aligned_cols=256  Identities=28%  Similarity=0.456  Sum_probs=205.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++..... .......+.+|+.+++.++||||+++++++..     ..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~   84 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST-----PT   84 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----SS
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec-----CC
Confidence            4689999999999999999999999999999999864211 12234578899999999999999999999854     34


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred             eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence            6899999997 599999988889999999999999999999999999999999999999999999999999999765332


Q ss_pred             CCCcccccccccCccccccccccccCCCC-CccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~-~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      .    ......||+.|+|||++.+  ..+ +.++|||||||++|+|++|..||.+.........+...            
T Consensus       165 ~----~~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------  226 (276)
T 2h6d_A          165 E----FLRTSCGSPNYAAPEVISG--RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------------  226 (276)
T ss_dssp             ----------------CCTGGGTT--SCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------------
T ss_pred             c----ceecccCCccccCHHHHcC--CCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------------
Confidence            2    1234579999999999876  343 68999999999999999999999876644333222110            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                    ...     ....+++.+.+||.+||+.||.+|||+.++++||||+..
T Consensus       227 --------------~~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          227 --------------VFY-----IPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             --------------CCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             --------------ccc-----CchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence                          000     112457889999999999999999999999999999753


No 141
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=1.1e-45  Score=375.48  Aligned_cols=259  Identities=29%  Similarity=0.449  Sum_probs=213.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++...   ....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence            4689999999999999999999999999999999975444455667889999999999999999999987532   2346


Q ss_pred             EEEEEeccc-ccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-----CccccCCCCCeeeCCCCcEEEeecc
Q 007428          192 IYVVFELME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTAN-----VFHRDLKPKNILANADCKLKICDFG  261 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~----~~l~~~~~~~i~~qil~aL~yLH~~g-----IiHrDLKp~NILl~~~~~vKL~DFG  261 (604)
                      +|+||||++ ++|.+++...    ..+++..+..++.||+.||.|||+.|     |+||||||+|||++.++.+||+|||
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            899999997 5899998653    34999999999999999999999999     9999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPS  341 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~  341 (604)
                      ++.......   .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+...     
T Consensus       162 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----  231 (279)
T 2w5a_A          162 LARILNHDT---SFAKTFVGTPYYMSPEQMNR--MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----  231 (279)
T ss_dssp             HHHHC---C---HHHHHHHSCCTTCCHHHHHC--C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----
T ss_pred             hheeecccc---ccccccCCCccccChHHhcc--CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----
Confidence            997653221   11234579999999999877  67899999999999999999999999887643332222110     


Q ss_pred             hhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          342 TESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       342 ~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                           . .   ......+++.+.+||.+||..||.+|||+.|+|+|+|+.+
T Consensus       232 ---------------------~-~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          232 ---------------------K-F---RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             ---------------------C-C---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ---------------------c-c---ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence                                 0 0   0111356889999999999999999999999999999975


No 142
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.8e-45  Score=381.29  Aligned_cols=264  Identities=24%  Similarity=0.413  Sum_probs=208.2

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCc-cC
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSR-RE  188 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~-~~  188 (604)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++....   .....+.+|+.+++.+ +||||+++++++..... ..
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   98 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   98 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence            3578999999999999999999999999999999986422   2345678999999999 79999999999865321 11


Q ss_pred             cccEEEEEecccc-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          189 FKDIYVVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       189 ~~~l~lV~E~~~g-~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ...+|+||||+++ +|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  178 (326)
T 2x7f_A           99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  178 (326)
T ss_dssp             CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred             cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence            3568999999985 999999764  4799999999999999999999999999999999999999999999999999976


Q ss_pred             ccCCCCCcccccccccCcccccccccccc---CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~---~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      ......   ......||+.|+|||++...   ...++.++|||||||++|+|++|..||.+.+....+..+..       
T Consensus       179 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------  248 (326)
T 2x7f_A          179 LDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-------  248 (326)
T ss_dssp             ---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-------
T ss_pred             cCcCcc---ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-------
Confidence            532221   12345799999999998621   15688999999999999999999999987765443332211       


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                         ...+   ......+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus       249 -------------------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          249 -------------------NPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             -------------------SCCC---CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             -------------------Cccc---cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence                               0001   01124568899999999999999999999999999999863


No 143
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.2e-45  Score=384.32  Aligned_cols=259  Identities=33%  Similarity=0.528  Sum_probs=206.4

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC------ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE------HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~------~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ++|++.+.||+|+||.||+|.+..+++.||||++.....      .......+.+|+.+|+.++||||+++++++...  
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--   87 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE--   87 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS--
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC--
Confidence            479999999999999999999999999999999864321      112234578999999999999999999998432  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc---EEEeeccc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGL  262 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~---vKL~DFGl  262 (604)
                          .+|+||||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||+
T Consensus        88 ----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           88 ----DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             ----SEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             ----ceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence                3799999997 589999988889999999999999999999999999999999999999987665   99999999


Q ss_pred             cccccCCCCCcccccccccCccccccccccc-cCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHH-HHHHhhcCCC
Q 007428          263 ARVSFNDAPSAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQL-DLMTDLLGTP  340 (604)
Q Consensus       263 a~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l-~~i~~~lg~p  340 (604)
                      +......    .......||+.|+|||++.+ ....++.++|||||||++|+|++|..||.+......+ ..+....   
T Consensus       164 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---  236 (322)
T 2ycf_A          164 SKILGET----SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK---  236 (322)
T ss_dssp             CEECCCC----HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC---
T ss_pred             ceecccc----cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc---
Confidence            9865321    12244679999999998742 1257889999999999999999999999765432111 1111100   


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                              .......+..+++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       237 ------------------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          237 ------------------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             ------------------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             ------------------------cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence                                    00011112456888999999999999999999999999999974


No 144
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=1.7e-45  Score=385.10  Aligned_cols=254  Identities=24%  Similarity=0.351  Sum_probs=207.4

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCc---EEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGE---RVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~---~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..++|++.+.||+|+||.||+|.+..++.   .||||+++... .......+.+|+.+|+.++||||+++++++.     
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----  120 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----  120 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----
Confidence            45789999999999999999999986655   49999997532 3345567899999999999999999999984     


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ....+|+|||||+ ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            3456899999997 5999999754 5799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      ...............+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.........+....       
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~-------  271 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAF--RTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY-------  271 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC-------
T ss_pred             cccCccceeeccCCCCcccccCHhHhcC--CCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-------
Confidence            6544333323334567889999999976  678999999999999999999 999998877654443332210       


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                        ..     .....+++.+.+||.+||..||.+|||+.++++
T Consensus       272 ------------------~~-----~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          272 ------------------RL-----PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ------------------CC-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CC-----CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                              00     112356889999999999999999999999987


No 145
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=1.5e-45  Score=378.91  Aligned_cols=262  Identities=23%  Similarity=0.388  Sum_probs=208.6

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++++.||+|+||.||+|.+..++..||+|++...  .......+.+|+.+|+.++||||+++++++...     .
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~   89 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-----G   89 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-----C
Confidence            346899999999999999999999999999999998643  223456788999999999999999999998543     4


Q ss_pred             cEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+|+|||||. ++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK  169 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence            6899999998 478887765 46799999999999999999999999999999999999999999999999999754211


Q ss_pred             CCCCcccccccccCccccccccccc---cCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~---~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ...   ......||+.|+|||++..   ....++.++|||||||++|+|++|..||.+.+....+..+...         
T Consensus       170 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---------  237 (302)
T 2j7t_A          170 TLQ---KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---------  237 (302)
T ss_dssp             HHH---C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS---------
T ss_pred             ccc---ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc---------
Confidence            110   1134579999999998741   1257889999999999999999999999887654433322110         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                       ..+.  ......+++.+.+||.+||..||.+|||+.++++||||..+.
T Consensus       238 -----------------~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          238 -----------------DPPT--LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             -----------------CCCC--CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             -----------------CCcc--cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence                             0000  011134578899999999999999999999999999998753


No 146
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=4.1e-45  Score=379.65  Aligned_cols=256  Identities=25%  Similarity=0.406  Sum_probs=202.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+  +|..||||++............+.+|+.+|+.++||||+++++++...     ..
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~  108 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-----PN  108 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-----TC
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----Cc
Confidence            45899999999999999999976  588999999976555555667889999999999999999999998543     45


Q ss_pred             EEEEEeccc-ccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          192 IYVVFELME-SDLHQVIKANDD---LTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~---l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      +|+|||||. ++|.+++.....   +++..+..++.||+.||.|||++|  |+||||||+|||++.++.+||+|||+++.
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence            899999998 589999987553   999999999999999999999999  99999999999999999999999999975


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......   ......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+...         
T Consensus       189 ~~~~~~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~---------  254 (309)
T 3p86_A          189 KASTFL---SSKSAAGTPEWMAPEVLRD--EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFK---------  254 (309)
T ss_dssp             ----------------CCTTSCHHHHTT--CCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHS---------
T ss_pred             cccccc---ccccCCCCccccChhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---------
Confidence            432221   1244689999999999987  67899999999999999999999999887654433322110         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc--Cccccc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA--DPYFHG  408 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~--Hp~f~~  408 (604)
                                     ....     .....+++.+.+||.+||..||.+|||+.++++  +++++.
T Consensus       255 ---------------~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          255 ---------------CKRL-----EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             ---------------CCCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             ---------------CCCC-----CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                           0000     112457889999999999999999999999998  455543


No 147
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=2.8e-45  Score=379.28  Aligned_cols=256  Identities=28%  Similarity=0.475  Sum_probs=208.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+..+|+.||||++...    .....+.+|+.+|+.++||||+++++++..     ...
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~   98 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NTD   98 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT----SCCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch----HHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCE
Confidence            46899999999999999999999999999999998642    234568899999999999999999999843     346


Q ss_pred             EEEEEecccc-cHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELMES-DLHQVIK-ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~g-~L~~~i~-~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||+++ +|.+++. ....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             EEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            8999999985 8999886 4568999999999999999999999999999999999999999999999999999765432


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ..   ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+.......+..              
T Consensus       179 ~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------------  239 (314)
T 3com_A          179 MA---KRNTVIGTPFWMAPEVIQE--IGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT--------------  239 (314)
T ss_dssp             BS---CBCCCCSCGGGCCHHHHSS--SCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--------------
T ss_pred             cc---ccCccCCCCCccChhhcCC--CCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc--------------
Confidence            21   1244679999999999877  6789999999999999999999999987665433222111              


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                   ..+..+ .....+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus       240 -------------~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          240 -------------NPPPTF-RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             -------------SCCCCC-SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             -------------CCCccc-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence                         000000 1112357889999999999999999999999999999864


No 148
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-45  Score=382.97  Aligned_cols=276  Identities=22%  Similarity=0.369  Sum_probs=209.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++.... ......+.+|+.+|+.++||||+++++++....   ...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~   83 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRH   83 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCC
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCC---Cce
Confidence            4689999999999999999999999999999999974322 233566789999999999999999999985432   246


Q ss_pred             EEEEEeccc-ccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee----CCCCcEEEeecccc
Q 007428          192 IYVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLKICDFGLA  263 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~---~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl----~~~~~vKL~DFGla  263 (604)
                      +|+|||||. ++|.+++....   .+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            899999997 68999997654   39999999999999999999999999999999999999    78888999999999


Q ss_pred             ccccCCCCCcccccccccCcccccccccccc------CCCCCccCchhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSF------FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVV-HQLDLMTDL  336 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~------~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~-~~l~~i~~~  336 (604)
                      +.......    ....+||+.|+|||++...      ...++.++|||||||++|||++|+.||...... .....+..+
T Consensus       164 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~  239 (319)
T 4euu_A          164 RELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI  239 (319)
T ss_dssp             EECCTTCC----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred             eecCCCCc----eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence            87543332    2446799999999987521      257899999999999999999999999754321 112222222


Q ss_pred             cCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCC-------CCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcc
Q 007428          337 LGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHK-------FPNADPLALHLLERLLAFDPKDRPTAEEALADPY  405 (604)
Q Consensus       337 lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~  405 (604)
                      +...+...+..+..          ....+..|...       ...+++.+.+||.+||+.||.+|||++|+|+||=
T Consensus       240 ~~~~p~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          240 ITGKPSGAISGVQK----------AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             HHHCCTTCCEEEEC----------STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             hcCCCcccchhhhc----------ccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            11111111100000          00001111111       1234567899999999999999999999999974


No 149
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=5.5e-46  Score=381.57  Aligned_cols=271  Identities=28%  Similarity=0.419  Sum_probs=192.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++...     ..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~   87 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-----DE   87 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESS-----SC
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeec-----CC
Confidence            4689999999999999999999998999999998864221 23355678999999999999999999998543     45


Q ss_pred             EEEEEeccc-ccHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccc
Q 007428          192 IYVVFELME-SDLHQVIKA--------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL  262 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~--------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGl  262 (604)
                      +|+||||+. ++|.+++..        ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            899999997 689888864        45699999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCC--CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q 007428          263 ARVSFNDAP--SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       263 a~~~~~~~~--~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      +........  .........||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+......+......  .+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~  244 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQV-RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN--DP  244 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHH-HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS--SC
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccc-cCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc--CC
Confidence            976533211  11112345799999999998642 46889999999999999999999999887654433222110  00


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      ..                   .............+++.+.+||.+||..||.+|||+.++++||||+...
T Consensus       245 ~~-------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          245 PS-------------------LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             CC-------------------TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             Cc-------------------cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            00                   0000111223456788999999999999999999999999999998754


No 150
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.5e-45  Score=384.15  Aligned_cols=263  Identities=25%  Similarity=0.423  Sum_probs=191.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHH-HHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIK-LLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~-iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||+++.... ......+.+|+. +++.++||||+++++++...     .
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-----~   94 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-----G   94 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-----S
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-----C
Confidence            4689999999999999999999999999999999975322 234455666776 67778999999999998543     4


Q ss_pred             cEEEEEecccccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          191 DIYVVFELMESDLHQVIKA-----NDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~-----~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      .+|+||||+.++|.+++..     ...+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++
T Consensus        95 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           95 DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            6899999999998888763     56799999999999999999999999 99999999999999999999999999997


Q ss_pred             cccCCCCCcccccccccCccccccccccc--cCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGS--FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      .......    .....||+.|+|||++..  ....++.++|||||||++|+|++|+.||.+.....  ..+         
T Consensus       175 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~---------  239 (327)
T 3aln_A          175 QLVDSIA----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF--DQL---------  239 (327)
T ss_dssp             C----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------
T ss_pred             ecccccc----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH--HHH---------
Confidence            6533221    233479999999999832  11568999999999999999999999997643210  000         


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                    ........+.........+++.+.+||.+||..||.+|||+.++++||||...
T Consensus       240 --------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          240 --------------TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             --------------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             --------------HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence                          00111111111122334678999999999999999999999999999999754


No 151
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=2.1e-45  Score=382.14  Aligned_cols=266  Identities=22%  Similarity=0.372  Sum_probs=193.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCc---EEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc-
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGE---RVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR-  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~---~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~-  187 (604)
                      .++|++.+.||+|+||.||+|.+..++.   .||||+++...........+.+|+.+++.++||||+++++++...... 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            4689999999999999999999877765   899999976544455677899999999999999999999998654321 


Q ss_pred             CcccEEEEEecccc-cHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeec
Q 007428          188 EFKDIYVVFELMES-DLHQVIKAND------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF  260 (604)
Q Consensus       188 ~~~~l~lV~E~~~g-~L~~~i~~~~------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DF  260 (604)
                      .....|+||||+.+ +|.+++....      .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Df  181 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADF  181 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeec
Confidence            12235999999984 8999886543      5999999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCC
Q 007428          261 GLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGT  339 (604)
Q Consensus       261 Gla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~  339 (604)
                      |+++......... ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+.......+...   
T Consensus       182 g~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~---  255 (323)
T 3qup_A          182 GLSRKIYSGDYYR-QGCASKLPVKWLALESLAD--NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG---  255 (323)
T ss_dssp             CC------------------CCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---
T ss_pred             ccccccccccccc-ccccccCcccccCchhhcC--CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC---
Confidence            9997653332211 1233467889999999877  679999999999999999999 99999887754443332210   


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCC-------HHHHhcCcccccCc
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPT-------AEEALADPYFHGLA  410 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpt-------a~eiL~Hp~f~~~~  410 (604)
                                              ..   ....+.+++.+.+||.+||..||.+|||       ++++++|||+....
T Consensus       256 ------------------------~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          256 ------------------------NR---LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             ------------------------CC---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             ------------------------CC---CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence                                    00   1112457889999999999999999999       78899999997643


No 152
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.2e-44  Score=372.95  Aligned_cols=254  Identities=27%  Similarity=0.412  Sum_probs=212.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      .+|++++.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.+.||||+++++++..     ...+
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~   95 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKL   95 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeE
Confidence            579999999999999999999999999999999864322 2345778999999999999999999999853     3468


Q ss_pred             EEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCC
Q 007428          193 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAP  271 (604)
Q Consensus       193 ~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~  271 (604)
                      |+||||+++ +|.+++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        96 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             EEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred             EEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence            999999985 88888754 5799999999999999999999999999999999999999999999999999976543221


Q ss_pred             CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhH
Q 007428          272 SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNE  351 (604)
Q Consensus       272 ~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~  351 (604)
                         ......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||...........+..                
T Consensus       175 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----------------  233 (303)
T 3a7i_A          175 ---KRNTFVGTPFWMAPEVIKQ--SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----------------  233 (303)
T ss_dssp             ---CBCCCCSCGGGCCHHHHTT--CCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH----------------
T ss_pred             ---ccCccCCCcCccCHHHHhc--CCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc----------------
Confidence               1245689999999999977  6789999999999999999999999987664333222211                


Q ss_pred             HHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          352 KARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       352 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                                 ..+   ......+++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       234 -----------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          234 -----------NNP---PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             -----------SCC---CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             -----------CCC---CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence                       011   1122356888999999999999999999999999999965


No 153
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.3e-44  Score=375.21  Aligned_cols=261  Identities=24%  Similarity=0.290  Sum_probs=208.7

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++.+.||+|+||.||+|.+.   ..+|+|+++...........+.+|+.+|+.++||||+++++++..      .
T Consensus        34 ~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~  104 (307)
T 3lb7_A           34 EASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------D  104 (307)
T ss_dssp             CTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred             cccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------C
Confidence            4578999999999999999999764   359999987655555667788999999999999999999998742      2


Q ss_pred             cEEEEEeccc-ccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIK-ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~-~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+|+|||||. ++|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       105 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~  184 (307)
T 3lb7_A          105 NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred             cEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence            4799999998 68999887 445799999999999999999999999999999999999999999999999999975432


Q ss_pred             CCCCcccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      .... .......||+.|+|||++... ...++.++|||||||++|||++|+.||.+.+..+++..+...           
T Consensus       185 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~-----------  252 (307)
T 3lb7_A          185 WSGS-QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-----------  252 (307)
T ss_dssp             ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH-----------
T ss_pred             cccc-ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc-----------
Confidence            2211 123456899999999988521 256889999999999999999999999886654443322110           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYF  406 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f  406 (604)
                                    ......+...+..+++.+.+||.+||+.||.+|||+.+++++.+.
T Consensus       253 --------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~  297 (307)
T 3lb7_A          253 --------------GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL  297 (307)
T ss_dssp             --------------TCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred             --------------CCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence                          111222334456788999999999999999999999999998765


No 154
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=1.1e-44  Score=386.17  Aligned_cols=253  Identities=26%  Similarity=0.411  Sum_probs=206.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-------CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-------HTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-------~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|.+.       .++..||||+++.. ........+.+|+.+|+.+ +||||+++++++..
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  158 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  158 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence            368999999999999999999864       35668999999753 2334567789999999999 89999999999854


Q ss_pred             CCccCcccEEEEEeccc-ccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCC
Q 007428          184 PSRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN  246 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~~~-g~L~~~i~~~~----------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~N  246 (604)
                           ...+|+||||+. ++|.+++....                .+++..+..++.||+.||.|||++||+||||||+|
T Consensus       159 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          159 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             -----SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             -----CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence                 345899999998 59999997653                47899999999999999999999999999999999


Q ss_pred             eeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCC
Q 007428          247 ILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKN  325 (604)
Q Consensus       247 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~  325 (604)
                      ||++.++.+||+|||+++........ .......+|+.|+|||++.+  ..|+.++|||||||++|||++ |..||.+..
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCHHHHHT--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEECCCCCEEEccccCCcccCcccce-ecccCCCcccceECHhHhcC--CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            99999999999999999865432221 11234567899999999877  689999999999999999999 999998866


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ....+..+...                       .+       ......+++.+.+||.+||..||.+|||+.|++++
T Consensus       311 ~~~~~~~~~~~-----------------------~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          311 VEELFKLLKEG-----------------------HR-------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             GGGHHHHHHTT-----------------------CC-------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcC-----------------------CC-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            54333222110                       00       01123568899999999999999999999999874


No 155
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=374.58  Aligned_cols=262  Identities=20%  Similarity=0.318  Sum_probs=192.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++++.||+|+||.||+|.+..+|+.||||++............+..+..+++.++||||+++++++...     ..
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-----~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-----TD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-----Cc
Confidence            4689999999999999999999999999999999975433222233344455568888999999999998543     46


Q ss_pred             EEEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||+++.+..+... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++......
T Consensus        99 ~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A           99 VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             EEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             EEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            899999997666666654 46799999999999999999999995 9999999999999999999999999999765332


Q ss_pred             CCCcccccccccCccccccccccc---cCCCCCccCchhhHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCChhHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN-VVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~---~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~-~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ..    .....||+.|+|||++..   ....++.++|||||||++|+|++|+.||.... ....+..+..          
T Consensus       179 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~----------  244 (318)
T 2dyl_A          179 KA----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ----------  244 (318)
T ss_dssp             ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH----------
T ss_pred             cc----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc----------
Confidence            21    234579999999999852   12568899999999999999999999997643 2222211111          


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                      ...+  .......+++.+.+||.+||..||.+|||+.++|+||||+.+.
T Consensus       245 ----------------~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (318)
T 2dyl_A          245 ----------------EEPP--LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYE  291 (318)
T ss_dssp             ----------------SCCC--CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHH
T ss_pred             ----------------cCCC--CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcc
Confidence                            0000  1111235789999999999999999999999999999998653


No 156
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=4.1e-45  Score=388.81  Aligned_cols=257  Identities=21%  Similarity=0.317  Sum_probs=208.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEE-----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAV-----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~-----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ..+|++++.||+|+||.||+|.     +..++..||||+++.. ........+.+|+.+|+.++||||+++++++...  
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--  146 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--  146 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC--
Confidence            4689999999999999999999     4567889999998643 2334556788999999999999999999998543  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC---cE
Q 007428          187 REFKDIYVVFELME-SDLHQVIKAND-------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KL  255 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~-------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~v  255 (604)
                         ...|+|||||. ++|.+++....       .+++..+..++.||+.||.|||++||+||||||+|||++.++   .+
T Consensus       147 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          147 ---LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             ---SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ---CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence               45799999996 59999997653       589999999999999999999999999999999999999655   49


Q ss_pred             EEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 007428          256 KICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMT  334 (604)
Q Consensus       256 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~  334 (604)
                      ||+|||+++......... ......||+.|+|||++.+  ..|+.++|||||||++|||++ |..||.+.+....+..+.
T Consensus       224 kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~  300 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYYR-KGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  300 (367)
T ss_dssp             EECCCHHHHHHHHHSSCT-TCCGGGSCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             EECCCccccccccccccc-cCCCcCCcccEECHHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            999999997543221111 1234578999999999877  689999999999999999998 999999877655444332


Q ss_pred             hhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          335 DLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       335 ~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                      ...                           ..   .....+++.+.+||.+||+.||.+|||+.++++|.++.
T Consensus       301 ~~~---------------------------~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          301 SGG---------------------------RM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             TTC---------------------------CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCC---------------------------CC---CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            210                           00   11235678899999999999999999999999998874


No 157
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=1.8e-44  Score=369.39  Aligned_cols=262  Identities=29%  Similarity=0.427  Sum_probs=200.6

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-------
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------  185 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-------  185 (604)
                      ++|++++.||+|+||.||+|.+..+|+.||||++..   .......+.+|+.+++.++||||+++++++....       
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            479999999999999999999999999999999853   2344567889999999999999999999875421       


Q ss_pred             -ccCcccEEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccc
Q 007428          186 -RREFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL  262 (604)
Q Consensus       186 -~~~~~~l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGl  262 (604)
                       ......+|+||||++ ++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcc
Confidence             123467899999997 59999997544 678899999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCC-----------CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCCh-HHHH
Q 007428          263 ARVSFNDAP-----------SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNV-VHQL  330 (604)
Q Consensus       263 a~~~~~~~~-----------~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~-~~~l  330 (604)
                      +........           .........||+.|+|||++.+. ..++.++|||||||++|+|++   ||..... ...+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~  238 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT-GHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNIL  238 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSC-SCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCC-CCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHH
Confidence            976432210           01122456799999999998752 468999999999999999998   5542111 1111


Q ss_pred             HHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCccccc
Q 007428          331 DLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHG  408 (604)
Q Consensus       331 ~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~  408 (604)
                      ..+                        .......+   .......++.+.+||.+||..||.+|||+.++|+||||..
T Consensus       239 ~~~------------------------~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          239 KKL------------------------RSVSIEFP---PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHH------------------------HSTTCCCC---TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             Hhc------------------------cccccccC---ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            111                        00001111   1222456788999999999999999999999999999974


No 158
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.1e-44  Score=381.93  Aligned_cols=255  Identities=25%  Similarity=0.433  Sum_probs=207.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEE-----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAV-----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~-----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.     +..+++.||||+++.. ........+.+|+.+|+.+ +||||+++++++....
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            4689999999999999999998     5667899999999753 2234456789999999999 7999999999986432


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhcCC----------------------------------------------------
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKANDD----------------------------------------------------  212 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~~~----------------------------------------------------  212 (604)
                          ..+|+|||||. ++|.+++.....                                                    
T Consensus       100 ----~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A          100 ----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             ----SCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             ----CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence                34899999998 599999976543                                                    


Q ss_pred             --------------CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCCCcccccc
Q 007428          213 --------------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTD  278 (604)
Q Consensus       213 --------------l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~  278 (604)
                                    +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ .....
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~  254 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGD  254 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC-EEC--
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc-hhccc
Confidence                          899999999999999999999999999999999999999999999999999865433221 22345


Q ss_pred             cccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHh
Q 007428          279 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYL  357 (604)
Q Consensus       279 ~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l  357 (604)
                      ..||+.|+|||++.+  ..|+.++||||||||+|||++ |..||.+......+.....                      
T Consensus       255 ~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----------------------  310 (359)
T 3vhe_A          255 ARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----------------------  310 (359)
T ss_dssp             CEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----------------------
T ss_pred             cCCCceeEChhhhcC--CCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----------------------
Confidence            678999999999877  689999999999999999998 9999988664332221111                      


Q ss_pred             hhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          358 GSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      .    ....   .....+++.+.+||.+||+.||.+|||+.|+++|
T Consensus       311 ~----~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          311 E----GTRM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             H----TCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             c----CCCC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            0    0000   1113468899999999999999999999999986


No 159
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=5.1e-45  Score=383.13  Aligned_cols=262  Identities=26%  Similarity=0.410  Sum_probs=184.1

Q ss_pred             CCCCeEEee-EeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHH-HHHHHcCCCCeeEEeeeecCCCccC
Q 007428          111 EASRYQIQE-VIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREI-KLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       111 ~~~~Y~i~~-~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei-~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..++|.+.+ +||+|+||.||+|.+..+|+.||||++...       ....+|+ ..++.+.||||+++++++.... ..
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~   97 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-------PKARQEVDHHWQASGGPHIVCILDVYENMH-HG   97 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TT
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-------HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CC
Confidence            356899965 699999999999999999999999998531       1122333 3467789999999999985321 22


Q ss_pred             cccEEEEEecccc-cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC---CCcEEEeeccc
Q 007428          189 FKDIYVVFELMES-DLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGL  262 (604)
Q Consensus       189 ~~~l~lV~E~~~g-~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~vKL~DFGl  262 (604)
                      ...+|+|||||.+ +|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus        98 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A           98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence            3458999999985 9999998754  6999999999999999999999999999999999999986   45599999999


Q ss_pred             cccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          263 ARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       263 a~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      +.......     ....+||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.........+.        
T Consensus       178 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--------  242 (336)
T 3fhr_A          178 AKETTQNA-----LQTPCYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK--------  242 (336)
T ss_dssp             CEEC-----------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------
T ss_pred             ceeccccc-----cccCCCCcCccChhhhCC--CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH--------
Confidence            97643222     234578999999999876  678899999999999999999999997654321110000        


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                     ..+...........+..+++.+.+||.+||..||.+|||+.|+|+||||++..
T Consensus       243 ---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          243 ---------------RRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             -----------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             ---------------HhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence                           00000011111223456889999999999999999999999999999998643


No 160
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=3e-44  Score=372.10  Aligned_cols=261  Identities=28%  Similarity=0.360  Sum_probs=205.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC--CCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR--HPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~--HpnIv~l~~~~~~~~~~~~  189 (604)
                      ..+|++++.||+|+||.||+|.+. +++.||||++............+.+|+.+|+.++  ||||+++++++...     
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~-----  100 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----  100 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS-----
T ss_pred             cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC-----
Confidence            457999999999999999999885 5899999999754444556678899999999997  59999999998543     


Q ss_pred             ccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          190 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       190 ~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      ..+|+|||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++......
T Consensus       101 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~  179 (313)
T 3cek_A          101 QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  179 (313)
T ss_dssp             SEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred             CEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence            4589999988899999999888999999999999999999999999999999999999996 589999999999865433


Q ss_pred             CCCcccccccccCcccccccccccc---------CCCCCccCchhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCC
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVV-HQLDLMTDLLGT  339 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~---------~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~-~~l~~i~~~lg~  339 (604)
                      ... ......+||+.|+|||++.+.         ...++.++|||||||++|+|++|+.||.+.... ..+..       
T Consensus       180 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~-------  251 (313)
T 3cek_A          180 TTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-------  251 (313)
T ss_dssp             -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-------
T ss_pred             ccc-ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH-------
Confidence            221 112345799999999998641         136888999999999999999999999764321 11110       


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                      .+   ......   ......++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       252 ----------------~~---~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          252 ----------------II---DPNHEI---EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             ----------------HH---CTTSCC---CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             ----------------HH---hccccc---CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence                            00   000111   1112347789999999999999999999999999999754


No 161
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.9e-44  Score=368.98  Aligned_cols=258  Identities=29%  Similarity=0.422  Sum_probs=203.3

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcccEE
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY  193 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~l~  193 (604)
                      +|....+||+|+||.||+|.+..++..||||++...  .......+.+|+.+++.++||||+++++++..     ...+|
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~   95 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIK   95 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEE
Confidence            344456899999999999999999999999998643  22345678899999999999999999999843     34689


Q ss_pred             EEEeccc-ccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC-CCcEEEeeccccccccC
Q 007428          194 VVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVSFN  268 (604)
Q Consensus       194 lV~E~~~-g~L~~~i~~~~---~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~  268 (604)
                      +||||+. ++|.+++....   .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A           96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred             EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence            9999996 68999987652   4678899999999999999999999999999999999987 89999999999986533


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ...   ......||+.|+|||++.+....++.++|||||||++|+|++|+.||.+..........               
T Consensus       176 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---------------  237 (295)
T 2clq_A          176 INP---CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---------------  237 (295)
T ss_dssp             --------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---------------
T ss_pred             CCC---cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---------------
Confidence            221   12346799999999998653234889999999999999999999999654322111000               


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                            .  ... ...+    .....+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus       238 ------~--~~~-~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          238 ------V--GMF-KVHP----EIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             ------H--HHH-CCCC----CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             ------h--ccc-cccc----cccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence                  0  000 0001    1224578899999999999999999999999999999754


No 162
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=4.5e-45  Score=383.25  Aligned_cols=273  Identities=19%  Similarity=0.320  Sum_probs=211.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh---------------hHHHHHHHHHHHHHHcCCCCeeE
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV---------------SDATRILREIKLLRLLRHPDIVE  176 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~---------------~~~~~~~~Ei~iL~~l~HpnIv~  176 (604)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++.......               .....+.+|+.+|+.++||||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            46899999999999999999998  89999999986422111               11267889999999999999999


Q ss_pred             EeeeecCCCccCcccEEEEEecccc-cHHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-CCCccccCCCCC
Q 007428          177 IKHIMLPPSRREFKDIYVVFELMES-DLHQV------IKA--NDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKN  246 (604)
Q Consensus       177 l~~~~~~~~~~~~~~l~lV~E~~~g-~L~~~------i~~--~~~l~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKp~N  246 (604)
                      +++++..     ...+|+||||+++ +|.++      +..  ...+++..++.++.||+.||.|||+ +||+||||||+|
T Consensus       108 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          108 CEGIITN-----YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             CSEEEES-----SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             EEEEEee-----CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            9999854     3568999999985 88887      655  5679999999999999999999999 999999999999


Q ss_pred             eeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCc-cCchhhHHHHHHHHHhCCCCCCCCC
Q 007428          247 ILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIGCIFAEMLTGKPLFPGKN  325 (604)
Q Consensus       247 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~-k~DIWSlGvil~eLltG~~PF~~~~  325 (604)
                      ||++.++.+||+|||++......     ......||+.|+|||++.+. ..++. ++|||||||++|+|++|..||.+..
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  256 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNE-SSYNGAKVDIWSLGICLYVMFYNVVPFSLKI  256 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSC-CCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEEcCCCcEEEeccccccccccc-----cccCCCCCcCccCchhhcCC-CCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999865332     23456899999999998762 25666 9999999999999999999998876


Q ss_pred             h-HHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCc
Q 007428          326 V-VHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADP  404 (604)
Q Consensus       326 ~-~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp  404 (604)
                      . ...+..+.......+... ..        +   ...............+++.+.+||.+||..||.+|||+.|+|+||
T Consensus       257 ~~~~~~~~i~~~~~~~~~~~-~~--------~---~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp  324 (348)
T 2pml_X          257 SLVELFNNIRTKNIEYPLDR-NH--------F---LYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE  324 (348)
T ss_dssp             CSHHHHHHHTSCCCCCCCSS-SS--------S---TTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred             cHHHHHHHHhccCcCCccch-hh--------h---hccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence            5 333333322110000000 00        0   000000001112256789999999999999999999999999999


Q ss_pred             ccccC
Q 007428          405 YFHGL  409 (604)
Q Consensus       405 ~f~~~  409 (604)
                      ||.+.
T Consensus       325 ~f~~~  329 (348)
T 2pml_X          325 WLADT  329 (348)
T ss_dssp             GGTTC
T ss_pred             cccCC
Confidence            99864


No 163
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=374.97  Aligned_cols=259  Identities=24%  Similarity=0.407  Sum_probs=207.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++..  ........+.+|+.+|+.++||||+++++++..     ...
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~   81 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKR   81 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCe
Confidence            4689999999999999999999999999999999854  234556778999999999999999999999853     356


Q ss_pred             EEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+|||||. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           82 LNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             EEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             eEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            899999997 599999987 567999999999999999999999999999999999999999999999999999865433


Q ss_pred             CCCc-----------ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q 007428          270 APSA-----------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLG  338 (604)
Q Consensus       270 ~~~~-----------~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg  338 (604)
                      ....           ......+||+.|+|||++.+  ..++.++|||||||++|||++|..||.........        
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~--------  231 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING--RSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--------  231 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTT--CCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT--------
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcC--CCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH--------
Confidence            2211           01124689999999999987  78999999999999999999999999764321000        


Q ss_pred             CCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          339 TPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       339 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                        .....        ...+..   .       ..+.+++.+.+||.+||+.||.+|||+.++++  |+..+
T Consensus       232 --~~~~~--------~~~~~~---~-------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~--~L~~l  280 (310)
T 3s95_A          232 --FGLNV--------RGFLDR---Y-------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH--WLETL  280 (310)
T ss_dssp             --SSBCH--------HHHHHH---T-------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH--HHHHH
T ss_pred             --Hhhhh--------hccccc---c-------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH--HHHHH
Confidence              00000        000000   0       11346778999999999999999999999988  66543


No 164
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=7.5e-45  Score=378.86  Aligned_cols=250  Identities=27%  Similarity=0.440  Sum_probs=207.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh----hHHHHHHHHHHHHHHcC--CCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV----SDATRILREIKLLRLLR--HPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~----~~~~~~~~Ei~iL~~l~--HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.......    .....+.+|+.+|+.+.  ||||+++++++..  
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~--  119 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER--  119 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC--
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec--
Confidence            568999999999999999999999999999999986432211    12244668999999996  5999999999854  


Q ss_pred             ccCcccEEEEEeccc--ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC-CCCcEEEeeccc
Q 007428          186 RREFKDIYVVFELME--SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-ADCKLKICDFGL  262 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~--g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~-~~~~vKL~DFGl  262 (604)
                         ...+|+|||++.  ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus       120 ---~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~  196 (320)
T 3a99_A          120 ---PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS  196 (320)
T ss_dssp             ---SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ---CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence               346899999997  68999999888999999999999999999999999999999999999999 789999999999


Q ss_pred             cccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          263 ARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       263 a~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      +.......     .....||+.|+|||++.+. ..++.++|||||||++|||++|+.||.+...      +.        
T Consensus       197 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~--------  256 (320)
T 3a99_A          197 GALLKDTV-----YTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------II--------  256 (320)
T ss_dssp             CEECCSSC-----BCCCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH--------
T ss_pred             cccccccc-----ccCCCCCccCCChHHhccC-CCCCccchHHhHHHHHHHHHHCCCCCCChhh------hh--------
Confidence            98654322     2456799999999998762 2347889999999999999999999965321      00        


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                     .   ..  .   .....+++.+.+||.+||..||.+|||++|+++||||++.
T Consensus       257 ---------------~---~~--~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          257 ---------------R---GQ--V---FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             ---------------H---CC--C---CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             ---------------c---cc--c---cccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence                           0   00  0   0113568899999999999999999999999999999865


No 165
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=3.6e-44  Score=363.13  Aligned_cols=249  Identities=24%  Similarity=0.397  Sum_probs=204.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+. ++..||||++.....   ....+.+|+.+|+.++||||+++++++..     ...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~   79 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAP   79 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSS
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCc
Confidence            368999999999999999999986 577899999975322   34568899999999999999999999854     345


Q ss_pred             EEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||++ ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           80 ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             EEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             eEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence            899999997 5899998654 46899999999999999999999999999999999999999999999999999764322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ..  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+.......+...            
T Consensus       160 ~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~------------  223 (269)
T 4hcu_A          160 QY--TSSTGTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG------------  223 (269)
T ss_dssp             HH--HSTTSTTCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT------------
T ss_pred             cc--ccccCcccccccCCHHHhcC--CCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC------------
Confidence            11  11234467889999999876  689999999999999999999 99999887755443332211            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                 ...       ......++.+.+||.+||+.||.+|||+.++++|
T Consensus       224 -----------~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          224 -----------FRL-------YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             -----------CCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------ccC-------CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                       000       0112357889999999999999999999999985


No 166
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=2.8e-44  Score=375.61  Aligned_cols=256  Identities=20%  Similarity=0.248  Sum_probs=203.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++.....    ...+.+|+.+|+.| +||||+++++++..     ..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~   78 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GK   78 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TT
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CC
Confidence            4689999999999999999999999999999999864321    23477899999999 89999999998843     45


Q ss_pred             cEEEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc-----EEEeeccccc
Q 007428          191 DIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK-----LKICDFGLAR  264 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-----vKL~DFGla~  264 (604)
                      ..|+||||++++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.     +||+|||+++
T Consensus        79 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           79 YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            6899999998899999986 468999999999999999999999999999999999999999887     9999999998


Q ss_pred             cccCCCCCcc----cccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q 007428          265 VSFNDAPSAI----FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       265 ~~~~~~~~~~----~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      ..........    .....+||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.+.......+..     
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~-----  231 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLG--KEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQK-----  231 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHH-----
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcC--CCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHH-----
Confidence            7543322111    1245689999999999987  6799999999999999999999999988543222221111     


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                             +......           .+....... .|.+.+||.+||..||.+||+++++++
T Consensus       232 -------i~~~~~~-----------~~~~~~~~~-~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          232 -------IGDTKRA-----------TPIEVLCEN-FPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -------HHHHHHH-----------SCHHHHTTT-CHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------HHhhhcc-----------CCHHHHhcc-ChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                   0000000           000000111 237999999999999999999998876


No 167
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=5.3e-44  Score=366.28  Aligned_cols=257  Identities=18%  Similarity=0.234  Sum_probs=206.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++....    ....+.+|+.+++.+ +|+||+++++++.     ...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~   79 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-----EGL   79 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT----TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-----ETT
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC----ccHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCc
Confidence            468999999999999999999999999999999986422    223467899999999 7999999999873     445


Q ss_pred             cEEEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc-----EEEeeccccc
Q 007428          191 DIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK-----LKICDFGLAR  264 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-----vKL~DFGla~  264 (604)
                      ..|+||||++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.     +||+|||+++
T Consensus        80 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~  159 (298)
T 1csn_A           80 HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  159 (298)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             eeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence            689999999889999998654 6999999999999999999999999999999999999988776     9999999998


Q ss_pred             cccCCCCCc----ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q 007428          265 VSFNDAPSA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       265 ~~~~~~~~~----~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      .........    .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.+.......+..     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~-----  232 (298)
T 1csn_A          160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER-----  232 (298)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH-----
T ss_pred             ccccccccccccccCccCCCCCcccCCchhhcC--CCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHH-----
Confidence            754432211    11245689999999999877  6789999999999999999999999988543221111111     


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                             +......           .+.....+.+++.+.+||.+||+.||.+|||++++++
T Consensus       233 -------~~~~~~~-----------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          233 -------IGEKKQS-----------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             -------HHHHHHH-----------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------HHhhccC-----------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence                   0000000           0011122356889999999999999999999999987


No 168
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=5e-44  Score=366.96  Aligned_cols=270  Identities=21%  Similarity=0.369  Sum_probs=204.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEE----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAV----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++++.||+|+||.||+|+    +..+++.||||++...  .......+.+|+.+|+.++||||+++++++...   
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---   83 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---   83 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence            4689999999999999999998    6678999999998642  334556789999999999999999999988542   


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ....+|+|||||. ++|.+++.... .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            2245899999996 69999997754 599999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ...............+|..|+|||++.+  ..++.++|||||||++|+|++|..||.....  .   .....+.......
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~--~---~~~~~~~~~~~~~  236 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYIEKSKSPPA--E---FMRMIGNDKQGQM  236 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH--H---HHHHHCTTCCTHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcC--CCCChHHHHHHHHHHHHHHHhcccccCCChH--H---HHhhhcCccccch
Confidence            5443322222234567888999999987  6899999999999999999999999865321  1   1112222211111


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      ..      ......+......+   ....+++.+.+||.+||..||.+|||+.|+++
T Consensus       237 ~~------~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          237 IV------FHLIELLKNNGRLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HH------HHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hH------HHHHHHHhccCcCC---CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            10      01111111111111   12457889999999999999999999999986


No 169
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=3.8e-44  Score=370.13  Aligned_cols=253  Identities=23%  Similarity=0.382  Sum_probs=207.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-----CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-----HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ..+|.+.+.||+|+||.||+|.+.     .++..||||+++.. ........+.+|+.+|+.++||||+++++++..   
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---   97 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ---   97 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence            468999999999999999999873     45689999998743 233456778999999999999999999999844   


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCCcccc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKANDD------------------------LTPEHYQFFLYQLLRGLKYIHTANVFHRD  241 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~~------------------------l~~~~~~~i~~qil~aL~yLH~~gIiHrD  241 (604)
                        ...+|+||||+. ++|.+++.....                        +++..+..++.||+.||.|||++||+|||
T Consensus        98 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           98 --DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             --SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             --CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence              345899999998 699999986543                        89999999999999999999999999999


Q ss_pred             CCCCCeeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCC
Q 007428          242 LKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPL  320 (604)
Q Consensus       242 LKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~P  320 (604)
                      |||+|||++.++.+||+|||++........ ........+|+.|+|||++.+  ..++.++|||||||++|+|++ |..|
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p  252 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDS-YVKRSQGRIPVKWMAIESLFD--HIYTTQSDVWSFGVLLWEIVTLGGNP  252 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSC-EECSSCCCSCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cchheEEEcCCCCEEEcccccccccccccc-ceeccCCCCcccccChhhhcC--CCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            999999999999999999999986543322 111234567899999999876  678999999999999999999 9999


Q ss_pred             CCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHH
Q 007428          321 FPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEA  400 (604)
Q Consensus       321 F~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~ei  400 (604)
                      |.+.........+..                           ...   ......+++.+.+||.+||..||.+|||+.++
T Consensus       253 ~~~~~~~~~~~~~~~---------------------------~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  302 (314)
T 2ivs_A          253 YPGIPPERLFNLLKT---------------------------GHR---MERPDNCSEEMYRLMLQCWKQEPDKRPVFADI  302 (314)
T ss_dssp             STTCCGGGHHHHHHT---------------------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCHHHHHHHhhc---------------------------CCc---CCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            988765433322211                           000   11224578899999999999999999999999


Q ss_pred             hcC
Q 007428          401 LAD  403 (604)
Q Consensus       401 L~H  403 (604)
                      +++
T Consensus       303 ~~~  305 (314)
T 2ivs_A          303 SKD  305 (314)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875


No 170
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=6.9e-44  Score=360.53  Aligned_cols=249  Identities=21%  Similarity=0.334  Sum_probs=204.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+. ++..||||+++...   .....+.+|+.+|+.++||||+++++++..     ...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~   77 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK-----EYP   77 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSS
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCc
Confidence            468999999999999999999775 57789999997432   234568899999999999999999999843     345


Q ss_pred             EEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||++ ++|.+++...+ .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             eEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            899999997 67999987654 5999999999999999999999999999999999999999999999999999865433


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ..  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+.......+...            
T Consensus       158 ~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------------  221 (268)
T 3sxs_A          158 QY--VSSVGTKFPVKWSAPEVFHY--FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG------------  221 (268)
T ss_dssp             CE--EECCSCCCCGGGCCHHHHHH--SEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT------------
T ss_pred             hh--hcccCCCcCcccCCHHHHhc--cCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC------------
Confidence            21  11234467788999999876  678999999999999999999 99999877654433322110            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                     ...   ......++.+.+||.+||+.||.+|||+.++++|
T Consensus       222 ---------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          222 ---------------HRL---YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             ---------------CCC---CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ---------------CCC---CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                           000   0112357889999999999999999999999985


No 171
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-44  Score=394.41  Aligned_cols=258  Identities=28%  Similarity=0.403  Sum_probs=193.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .+|.+.++||+|+||.|+. ....+|+.||||++.....     ..+.+|+.+|+.+ +|||||++++++.     +...
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~-----~~~~   92 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEK-----DRQF   92 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEE-----ETTE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEe-----cCCE
Confidence            4699999999999998664 3456899999999864221     1246899999999 7999999999884     4456


Q ss_pred             EEEEEecccccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC-----CCcEEEeecccccc
Q 007428          192 IYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-----DCKLKICDFGLARV  265 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~-----~~~vKL~DFGla~~  265 (604)
                      +|||||||+++|.+++.... .+.+..+..++.||+.||.|||++||+||||||+|||++.     ...+||+|||+|+.
T Consensus        93 ~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~  172 (432)
T 3p23_A           93 QYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK  172 (432)
T ss_dssp             EEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred             EEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence            89999999999999998654 4666678899999999999999999999999999999953     33588999999987


Q ss_pred             ccCCCCCcccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ..............+||++|+|||++.+. ...++.++||||||||+|||++ |..||...... +...+.   +..   
T Consensus       173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~-~~~~~~---~~~---  245 (432)
T 3p23_A          173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR-QANILL---GAC---  245 (432)
T ss_dssp             C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-HHHHHT---TCC---
T ss_pred             ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-HHHHHh---ccC---
Confidence            64433222233557899999999998642 2567889999999999999999 89999654321 111110   000   


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                           ...........++.+.+||.+||+.||.+|||+.++|+||||..+
T Consensus       246 ---------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          246 ---------------------SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             ---------------------CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             ---------------------CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence                                 000001112235568999999999999999999999999999764


No 172
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=7.3e-45  Score=379.29  Aligned_cols=273  Identities=22%  Similarity=0.248  Sum_probs=206.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+.  ++.||||++...   ........+|+.+|+.++||||+++++++.... .....
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~   96 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVD   96 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCce
Confidence            468999999999999999999875  899999998642   233445667999999999999999999986432 12345


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----------CCccccCCCCCeeeCCCCcEEEeec
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA----------NVFHRDLKPKNILANADCKLKICDF  260 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~----------gIiHrDLKp~NILl~~~~~vKL~DF  260 (604)
                      +|+|||||. ++|.+++... .+++..+..++.||+.||.|||+.          ||+||||||+|||++.++.+||+||
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF  175 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF  175 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence            899999997 5999999764 599999999999999999999999          9999999999999999999999999


Q ss_pred             cccccccCCCCCcccccccccCccccccccccccC---CCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q 007428          261 GLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLL  337 (604)
Q Consensus       261 Gla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~---~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~l  337 (604)
                      |+++......... .....+||+.|+|||++.+..   ..++.++|||||||++|||++|+.||.+......+.......
T Consensus       176 g~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~  254 (322)
T 3soc_A          176 GLALKFEAGKSAG-DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG  254 (322)
T ss_dssp             TTCEEECTTSCCC-CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred             CcccccccccCcc-ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence            9997654433221 124468999999999986521   245568899999999999999999998765433332233333


Q ss_pred             CCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCC--CCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          338 GTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFP--NADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       338 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      +.+....+...        ...  ......+...+.  ..++.+.+||.+||+.||.+|||+.|+++
T Consensus       255 ~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          255 QHPSLEDMQEV--------VVH--KKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             SSCCHHHHHHH--------HTT--SCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCchhhhhhh--------hhc--ccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            33433322211        100  111111111111  12355899999999999999999999987


No 173
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=5.9e-44  Score=363.92  Aligned_cols=249  Identities=21%  Similarity=0.315  Sum_probs=202.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++++.||+|+||.||+|.+. ++..||||+++....   ....+.+|+.+|+.++||||+++++++..     ...
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~   93 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRP   93 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSS
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEec-----CCC
Confidence            468999999999999999999876 677899999974322   34568899999999999999999999843     346


Q ss_pred             EEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A           94 IFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             EEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred             eEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence            899999997 689999976 457999999999999999999999999999999999999999999999999999765322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ..  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+.......+....           
T Consensus       174 ~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----------  238 (283)
T 3gen_A          174 EY--TSSVGSKFPVRWSPPEVLMY--SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-----------  238 (283)
T ss_dssp             HH--HSTTSTTSCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-----------
T ss_pred             cc--ccccCCccCcccCCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc-----------
Confidence            11  11233467889999999886  679999999999999999998 999998877554443332211           


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                  ..       ......++.+.+||.+||+.||.+|||+.++++|
T Consensus       239 ------------~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          239 ------------RL-------YRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             ------------CC-------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ------------CC-------CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                        00       0112357889999999999999999999999986


No 174
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.7e-43  Score=378.00  Aligned_cols=253  Identities=25%  Similarity=0.416  Sum_probs=207.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECC-------CCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTH-------TGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~-------~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|.+..       .+..||||+++.. ........+.+|+.+++.+ +||||+++++++..
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            4689999999999999999998754       3458999999753 2334567789999999999 89999999999854


Q ss_pred             CCccCcccEEEEEeccc-ccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCC
Q 007428          184 PSRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN  246 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~~~-g~L~~~i~~~~----------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~N  246 (604)
                      .     ..+|+|||||. ++|.+++....                .+++..++.++.||+.||.|||++||+||||||+|
T Consensus       147 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          147 D-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             S-----SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             C-----CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            3     45899999997 59999998654                49999999999999999999999999999999999


Q ss_pred             eeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCC
Q 007428          247 ILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKN  325 (604)
Q Consensus       247 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~  325 (604)
                      ||++.++.+||+|||+++........ .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~ellt~g~~p~~~~~  298 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  298 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTT-CCCTTCCCGGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEcCCCcEEEcccCccccccccccc-ccccCCCCCcceeCHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999865432211 11234568899999999877  689999999999999999999 999998877


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      .......+...                       ..       ......+++.+.+||.+||+.||.+|||+.|++++
T Consensus       299 ~~~~~~~~~~~-----------------------~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          299 VEELFKLLKEG-----------------------HR-------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHHHTT-----------------------CC-------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcC-----------------------CC-------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            54433322210                       00       01123568899999999999999999999999985


No 175
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=6e-44  Score=369.51  Aligned_cols=259  Identities=20%  Similarity=0.305  Sum_probs=199.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECC---CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTH---TGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~---~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|.+.+.||+|+||.||+|....   ++..||||+++...........+.+|+.+|+.++||||+++++++.......
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence            4689999999999999999998765   5668999999755445556677899999999999999999999987655443


Q ss_pred             cccEEEEEeccc-ccHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecc
Q 007428          189 FKDIYVVFELME-SDLHQVIKA------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG  261 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFG  261 (604)
                      ....|+||||+. ++|.+++..      ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg  192 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFG  192 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecC
Confidence            446799999998 589998843      3569999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCC
Q 007428          262 LARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       262 la~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      ++......... .......+++.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.........+...    
T Consensus       193 ~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----  265 (313)
T 3brb_A          193 LSKKIYSGDYY-RQGRIAKMPVKWIAIESLAD--RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG----  265 (313)
T ss_dssp             CC-----------------CCGGGSCHHHHHS--SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT----
T ss_pred             cceeccccccc-CcccccCCCccccCchhhcC--CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC----
Confidence            99765332211 11233467889999999977  689999999999999999999 89999887654433322110    


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                         .   .+    .....+++.+.+||.+||..||.+|||+.+++++
T Consensus       266 -------------------~---~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          266 -------------------H---RL----KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             -------------------C---CC----CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             -------------------C---CC----CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                               0   00    1124567899999999999999999999999874


No 176
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.9e-44  Score=371.70  Aligned_cols=250  Identities=27%  Similarity=0.437  Sum_probs=201.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh----hHHHHHHHHHHHHHHc----CCCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV----SDATRILREIKLLRLL----RHPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~----~~~~~~~~Ei~iL~~l----~HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++......    .....+.+|+.+++.+    +||||+++++++..
T Consensus        30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~  109 (312)
T 2iwi_A           30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET  109 (312)
T ss_dssp             ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred             hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence            468999999999999999999999999999999986432211    1233456799999998    89999999999844


Q ss_pred             CCccCcccEEEEEec-cc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC-CCCcEEEeec
Q 007428          184 PSRREFKDIYVVFEL-ME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-ADCKLKICDF  260 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~-~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~-~~~~vKL~DF  260 (604)
                      .     ...|+|||| +. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus       110 ~-----~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~df  184 (312)
T 2iwi_A          110 Q-----EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF  184 (312)
T ss_dssp             --------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             C-----CeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence            3     457999998 54 69999999888899999999999999999999999999999999999999 8899999999


Q ss_pred             cccccccCCCCCcccccccccCccccccccccccCCCC-CccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q 007428          261 GLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGT  339 (604)
Q Consensus       261 Gla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~-~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~  339 (604)
                      |++.......     .....||+.|+|||++.+  ..+ +.++|||||||++|+|++|+.||.+...      +.     
T Consensus       185 g~~~~~~~~~-----~~~~~~~~~y~aPE~~~~--~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~-----  246 (312)
T 2iwi_A          185 GSGALLHDEP-----YTDFDGTRVYSPPEWISR--HQYHALPATVWSLGILLYDMVCGDIPFERDQE------IL-----  246 (312)
T ss_dssp             SSCEECCSSC-----BCCCCSCTTTSCHHHHHH--SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HH-----
T ss_pred             chhhhcccCc-----ccccCCcccccCceeeec--CCCCCccchHHHHHHHHHHHHHCCCCCCChHH------Hh-----
Confidence            9998654322     245679999999999876  344 4589999999999999999999965211      00     


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                                        .   ...     .....+++.+.+||.+||..||.+|||++|+|+||||+...
T Consensus       247 ------------------~---~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          247 ------------------E---AEL-----HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             ------------------H---TCC-----CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             ------------------h---hcc-----CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence                              0   000     11235688999999999999999999999999999998643


No 177
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=5.7e-44  Score=373.32  Aligned_cols=252  Identities=21%  Similarity=0.357  Sum_probs=197.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEE----EEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERV----AIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~v----AIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++.+.||+|+||.||+|.+..++..|    |+|.+.... .......+.+|+.+|+.++||||+++++++...   
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---   89 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS---   89 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---
Confidence            457999999999999999999998887765    677664321 223456789999999999999999999998643   


Q ss_pred             CcccEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                         ..++||||+. ++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        90 ---~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           90 ---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             ---SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred             ---CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence               3688999987 689998876 45799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      ........ ......||+.|+|||++.+  ..|+.++|||||||++|||++ |+.||.+.+.......+...        
T Consensus       167 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~--------  235 (327)
T 3poz_A          167 LGAEEKEY-HAEGGKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--------  235 (327)
T ss_dssp             HTTTCC--------CCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT--------
T ss_pred             ccCCcccc-cccCCCccccccChHHhcc--CCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcC--------
Confidence            64333221 1234567889999999987  789999999999999999999 99999886654332222110        


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                         ...   ...+.+++.+.+||.+||+.||.+|||+.+++++
T Consensus       236 -------------------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          236 -------------------ERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             -------------------CCC---CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             -------------------CCC---CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                               000   1123467889999999999999999999999876


No 178
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=7.8e-44  Score=372.70  Aligned_cols=253  Identities=22%  Similarity=0.294  Sum_probs=206.5

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEEC-----CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDT-----HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS  185 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~  185 (604)
                      ..++|++.+.||+|+||.||+|.+.     .++..||||+++... .......+.+|+.+|+.++||||+++++++..  
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--  121 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAV--  121 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc--
Confidence            3468999999999999999999987     456899999997532 23445678999999999999999999999854  


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKAN------------------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHR  240 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~------------------------~~l~~~~~~~i~~qil~aL~yLH~~gIiHr  240 (604)
                         ...+|+||||+. ++|.+++...                        ..+++..+..++.||+.||.|||++||+||
T Consensus       122 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~  198 (343)
T 1luf_A          122 ---GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  198 (343)
T ss_dssp             ---SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             ---CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence               345899999998 5999999764                        569999999999999999999999999999


Q ss_pred             cCCCCCeeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCC
Q 007428          241 DLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKP  319 (604)
Q Consensus       241 DLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~  319 (604)
                      ||||+|||++.++.+||+|||+++........ .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCccc-cccCCCcccceecChhhhcc--CCcCcccccHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999765322211 11234578999999999877  679999999999999999999 999


Q ss_pred             CCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHH
Q 007428          320 LFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEE  399 (604)
Q Consensus       320 PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~e  399 (604)
                      ||.+.+.......+..                           ...   ......+++.+.+||.+||..||.+|||+.+
T Consensus       276 p~~~~~~~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~  325 (343)
T 1luf_A          276 PYYGMAHEEVIYYVRD---------------------------GNI---LACPENCPLELYNLMRLCWSKLPADRPSFCS  325 (343)
T ss_dssp             TTTTSCHHHHHHHHHT---------------------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCCCCChHHHHHHHhC---------------------------CCc---CCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence            9988765443332211                           000   0112356789999999999999999999999


Q ss_pred             Hhc
Q 007428          400 ALA  402 (604)
Q Consensus       400 iL~  402 (604)
                      +++
T Consensus       326 ~~~  328 (343)
T 1luf_A          326 IHR  328 (343)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            987


No 179
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=9.8e-44  Score=362.58  Aligned_cols=251  Identities=25%  Similarity=0.417  Sum_probs=195.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCC---CcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHT---GERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~---g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|++.+.||+|+||.||+|.+..+   +..||||+++.. ........+.+|+.+|+.++||||+++++++..     
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----   87 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-----   87 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-----
Confidence            46899999999999999999998654   557999998643 233445678999999999999999999999732     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                       ..+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        88 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  166 (281)
T 1mp8_A           88 -NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  166 (281)
T ss_dssp             -SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             -CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccccc
Confidence             34799999998 58999997654 6999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......  ......+|+.|+|||++.+  ..++.++|||||||++|||++ |.+||.+....+.+..+...         
T Consensus       167 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~---------  233 (281)
T 1mp8_A          167 EDSTYY--KASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---------  233 (281)
T ss_dssp             --------------CCGGGCCHHHHHH--CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---------
T ss_pred             Cccccc--ccccCCCcccccChhhccc--CCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC---------
Confidence            332211  1233467889999999876  689999999999999999997 99999887654443332210         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                        ...   ...+.+++.+.+||.+||..||.+|||+.+++++
T Consensus       234 ------------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          234 ------------------ERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------CCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                              000   1224578999999999999999999999999873


No 180
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2e-43  Score=366.10  Aligned_cols=254  Identities=28%  Similarity=0.375  Sum_probs=198.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++..     ..
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-----DG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----CC
Confidence            4689999999999999999999999999999999875432 22335678899999999999999999999843     45


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             eEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            6899999998 499999998889999999999999999999999999999999999999999999999999999765332


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ...  ......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+..              
T Consensus       188 ~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--------------  249 (309)
T 2h34_A          188 KLT--QLGNTVGTLYYMAPERFSE--SHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ--------------  249 (309)
T ss_dssp             -----------CCGGGCCGGGTCC------CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS--------------
T ss_pred             ccc--cccccCCCcCccCHHHHcC--CCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc--------------
Confidence            211  1245679999999999877  6789999999999999999999999987653211111100              


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCC-CHHHHhc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRP-TAEEALA  402 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rp-ta~eiL~  402 (604)
                                    .........+.+++.+.+||.+||..||.+|| +++++++
T Consensus       250 --------------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          250 --------------AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             --------------CCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             --------------CCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                          00111123356788999999999999999999 7777765


No 181
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.4e-43  Score=363.30  Aligned_cols=253  Identities=21%  Similarity=0.316  Sum_probs=204.9

Q ss_pred             CCCeEEee-EeeecCceEEEEEE--ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQE-VIGKGSYGVVGSAV--DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~-~LG~G~fG~Vy~a~--~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..+|.+.+ .||+|+||.||+|.  +..++..||||+++...........+.+|+.+++.++||||+++++++..     
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----   89 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-----   89 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-----
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-----
Confidence            35799998 99999999999994  46678999999997654444456778999999999999999999999822     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                       ..+|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        90 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           90 -ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR  168 (291)
T ss_dssp             -SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             -CCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence             34799999998 6899999988889999999999999999999999999999999999999999999999999998654


Q ss_pred             CCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHH
Q 007428          268 NDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESIS  346 (604)
Q Consensus       268 ~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~  346 (604)
                      .............+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+.......+..           
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----------  235 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----------  235 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----------
T ss_pred             cCCCcccccccCCCCceeeChHHhcc--CCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----------
Confidence            43322222233457789999999876  678899999999999999999 9999988765433322211           


Q ss_pred             HHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          347 RIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       347 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                      ...   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       236 ----------------~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          236 ----------------GER---MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             ----------------TCC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------------CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                            000   0112457889999999999999999999999986


No 182
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=9e-44  Score=370.18  Aligned_cols=258  Identities=22%  Similarity=0.353  Sum_probs=189.6

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCC---ccC
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPS---RRE  188 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~---~~~  188 (604)
                      .+|++.+.||+|+||.||+|.+..+++.||||++..  ........+.+|+.+|+.+. ||||+++++++....   ...
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLS--NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecC--CchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            489999999999999999999999999999999853  23345667889999999996 999999999884321   133


Q ss_pred             cccEEEEEecccccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCCeeeCCCCcEEEeecccc
Q 007428          189 FKDIYVVFELMESDLHQVIKA---NDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLA  263 (604)
Q Consensus       189 ~~~l~lV~E~~~g~L~~~i~~---~~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKp~NILl~~~~~vKL~DFGla  263 (604)
                      ...+|+||||++|+|.+++..   .+.+++..++.++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||++
T Consensus       106 ~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  185 (337)
T 3ll6_A          106 QAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA  185 (337)
T ss_dssp             SEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred             CceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccc
Confidence            456899999999999988865   457999999999999999999999999  999999999999999999999999999


Q ss_pred             ccccCCCCCc---------ccccccccCccccccccccc-cCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 007428          264 RVSFNDAPSA---------IFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLM  333 (604)
Q Consensus       264 ~~~~~~~~~~---------~~~~~~~gT~~Y~APE~l~~-~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i  333 (604)
                      ..........         .......||+.|+|||++.. ....++.++|||||||++|+|++|+.||.+......+.  
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--  263 (337)
T 3ll6_A          186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN--  263 (337)
T ss_dssp             BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc--
Confidence            8654322211         00124569999999999831 12568899999999999999999999997644211110  


Q ss_pred             HhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcc
Q 007428          334 TDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPY  405 (604)
Q Consensus       334 ~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~  405 (604)
                                                  .....   ......++.+.+||.+||+.||.+|||+.|+++|.+
T Consensus       264 ----------------------------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          264 ----------------------------GKYSI---PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ------------------------------CCC---CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ----------------------------CcccC---CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence                                        00000   111335667999999999999999999999999754


No 183
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2.3e-43  Score=361.59  Aligned_cols=257  Identities=24%  Similarity=0.309  Sum_probs=196.7

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++.+.||+|+||.||+|.+.   ..||||+++...........+.+|+.+|+.++||||+.++++...      .
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~   92 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------P   92 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred             CccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------C
Confidence            3578999999999999999999754   359999997655555667789999999999999999999997532      3


Q ss_pred             cEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          191 DIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      .+++|||||. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccc
Confidence            4799999998 689888854 35799999999999999999999999999999999999999999999999999975432


Q ss_pred             CCCCcccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      .... .......||+.|+|||++... ...++.++|||||||++|+|++|+.||.+......+..+...           
T Consensus       173 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-----------  240 (289)
T 3og7_A          173 WSGS-HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR-----------  240 (289)
T ss_dssp             ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH-----------
T ss_pred             cccc-ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc-----------
Confidence            2221 123456799999999998521 256888999999999999999999999876654433222110           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                    ......+......+++.+.+||.+||..||.+|||+.++++
T Consensus       241 --------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          241 --------------GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             --------------TSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------cccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                          11112223334567899999999999999999999999987


No 184
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=3.1e-43  Score=359.36  Aligned_cols=249  Identities=23%  Similarity=0.334  Sum_probs=201.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhH-----HHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSD-----ATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~-----~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.........     ...+.+|+.+++.++||||+++++++...  
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--   95 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--   95 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence            46899999999999999999999999999999998643222211     16788999999999999999999998543  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCCeeeCCCCc-----EEE
Q 007428          187 REFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCK-----LKI  257 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKp~NILl~~~~~-----vKL  257 (604)
                           .++||||+. ++|.+.+... ..+++..+..++.||+.||.|||++|  |+||||||+|||++.++.     +||
T Consensus        96 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl  170 (287)
T 4f0f_A           96 -----PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV  170 (287)
T ss_dssp             -----TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred             -----CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence                 279999998 6898887654 47999999999999999999999999  999999999999988876     999


Q ss_pred             eeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHH--HHHHHh
Q 007428          258 CDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQ--LDLMTD  335 (604)
Q Consensus       258 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~--l~~i~~  335 (604)
                      +|||+++....      ......||+.|+|||++......++.++|||||||++|+|++|+.||.+......  ...+. 
T Consensus       171 ~Dfg~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-  243 (287)
T 4f0f_A          171 ADFGLSQQSVH------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-  243 (287)
T ss_dssp             CCCTTCBCCSS------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH-
T ss_pred             CCCCccccccc------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh-
Confidence            99999974322      1245689999999999854335688999999999999999999999986543221  11110 


Q ss_pred             hcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          336 LLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       336 ~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                             .  ....   ......+++.+.+||.+||+.||.+|||++++++
T Consensus       244 -----------------------~--~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          244 -----------------------E--EGLR---PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             -----------------------H--SCCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------------c--cCCC---CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                   0  0000   1122457889999999999999999999999986


No 185
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.6e-43  Score=361.23  Aligned_cols=249  Identities=22%  Similarity=0.422  Sum_probs=208.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+..++..||||++..   .......+.+|+.+++.++||||+++++++..     ...
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~   83 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPP   83 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS---CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSS
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCC
Confidence            4689999999999999999999999999999999964   23456778899999999999999999999843     345


Q ss_pred             EEEEEeccc-ccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|+||||+. ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence            899999998 6999999864  3599999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+.......+...           
T Consensus       164 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~-----------  228 (288)
T 3kfa_A          164 DTY--TAHAGAKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-----------  228 (288)
T ss_dssp             SSS--EEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----------
T ss_pred             Ccc--ccccCCccccCcCChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc-----------
Confidence            322  12234567889999999877  689999999999999999999 99999887654333322110           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                  ..       ......+++.+.+||.+||..||.+|||+.++++
T Consensus       229 ------------~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          229 ------------YR-------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             ------------CC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CC-------CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                        00       0112456889999999999999999999999977


No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=2.1e-43  Score=364.36  Aligned_cols=254  Identities=27%  Similarity=0.407  Sum_probs=207.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEE-----CCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVD-----THTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~-----~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+     ..++..||||+++.. ........+.+|+.+|+.+ +||||+++++++... 
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-   99 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG-   99 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC-
Confidence            46899999999999999999984     467889999999743 2234567789999999999 899999999998543 


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCC
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKAND------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN  246 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~~------------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~N  246 (604)
                          ...|+||||+. ++|.+++....                  .+++..+..++.||+.||.|||++||+||||||+|
T Consensus       100 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A          100 ----GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             ----SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             ----CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence                45899999997 59999997654                  48999999999999999999999999999999999


Q ss_pred             eeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCC
Q 007428          247 ILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKN  325 (604)
Q Consensus       247 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~  325 (604)
                      ||++.++.+||+|||++......... .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+..
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~  252 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNY-VVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTS-EECSSSEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             EEEcCCCCEEEccccccccccccccc-eeccCCCCcceeeChHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            99999999999999999865443322 12234567889999999877  689999999999999999999 999998765


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ....+..+..                      .....       .....+++.+.+||.+||..||.+|||+.|++++
T Consensus       253 ~~~~~~~~~~----------------------~~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          253 VDSKFYKMIK----------------------EGFRM-------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             SSHHHHHHHH----------------------HTCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chhHHHHHhc----------------------cCCCC-------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            4332221111                      00000       1123567899999999999999999999999874


No 187
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=5.6e-44  Score=372.81  Aligned_cols=252  Identities=21%  Similarity=0.338  Sum_probs=200.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcE----EEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGER----VAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~----vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++++.||+|+||.||+|.+..++..    ||+|.+.... .......+.+|+.+++.++||||+++++++..    
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----   86 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG----   86 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB----
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----
Confidence            46899999999999999999999888876    6677664321 11223456789999999999999999998832    


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                        ..+|+||||+. ++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        87 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           87 --SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             --SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             --CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence              34899999998 6899988764 5799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      ....... .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.........+...        
T Consensus       165 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--------  233 (325)
T 3kex_A          165 LPPDDKQ-LLYSEAKTPIKWMALESIHF--GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG--------  233 (325)
T ss_dssp             SCCCTTC-CC-----CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT--------
T ss_pred             cCccccc-ccccCCCCcccccChHHhcc--CCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC--------
Confidence            6443322 22345678889999999977  679999999999999999999 99999886643333222110        


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                         ...   .....+++.+.+||.+||..||.+|||+.++++|
T Consensus       234 -------------------~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          234 -------------------ERL---AQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             -------------------CBC---CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             -------------------CCC---CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                               000   0112346678999999999999999999999986


No 188
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=8.4e-44  Score=379.80  Aligned_cols=253  Identities=25%  Similarity=0.391  Sum_probs=194.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC---CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT---HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~---~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..+|.+.+.||+|+||.||+|++.   .++..||||+++... .......+.+|+.+|+.++||||+++++++..     
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----  117 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK-----  117 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee-----
Confidence            468999999999999999999876   467789999986432 33456678999999999999999999999854     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      ...+|+|||||. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence            345899999996 69999997654 6999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ..............+|+.|+|||++.+  ..++.++|||||||++|||++ |+.||.+.+.......+...         
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~---------  266 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAY--RKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG---------  266 (373)
T ss_dssp             ----------------CTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT---------
T ss_pred             ccCCccceeccCCCcCCCccChhhhcc--CCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC---------
Confidence            433222211223356788999999977  689999999999999999998 99999877654433322110         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                    .+  .+     ....+++.+.+||.+||+.||.+||++.++++
T Consensus       267 --------------~~--~~-----~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          267 --------------YR--LP-----PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             --------------EE--CC-----CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------------CC--CC-----CCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                          00  01     11346788999999999999999999999886


No 189
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-43  Score=371.16  Aligned_cols=256  Identities=26%  Similarity=0.415  Sum_probs=204.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEE-----CCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVD-----THTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~-----~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+     ..++..||||+++... .......+.+|+.+|+.+ .||||+++++++... 
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-  121 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS-  121 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC-
Confidence            46899999999999999999997     3467789999997432 223456788999999999 899999999998543 


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccc
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKAND-----------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRD  241 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~~-----------------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrD  241 (604)
                          ..+|+|||||+ ++|.+++....                       .+++..+..++.||+.||.|||++||+|||
T Consensus       122 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          122 ----GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ----SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             ----CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence                45899999997 59999997653                       379999999999999999999999999999


Q ss_pred             CCCCCeeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCC
Q 007428          242 LKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPL  320 (604)
Q Consensus       242 LKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~P  320 (604)
                      |||+|||++.++.+||+|||++......... .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..|
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p  274 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEIFSLGVNP  274 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCccc-eeccCccCccCccCHHHhcc--CCCChhHhHHHHHHHHHHHHcCCCCC
Confidence            9999999999999999999999865443322 22344568899999999877  689999999999999999998 9999


Q ss_pred             CCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHH
Q 007428          321 FPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEA  400 (604)
Q Consensus       321 F~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~ei  400 (604)
                      |.+......+..+..                      ....    .   .....+++.+.+||.+||..||.+|||+.++
T Consensus       275 ~~~~~~~~~~~~~~~----------------------~~~~----~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l  325 (344)
T 1rjb_A          275 YPGIPVDANFYKLIQ----------------------NGFK----M---DQPFYATEEIYIIMQSCWAFDSRKRPSFPNL  325 (344)
T ss_dssp             STTCCCSHHHHHHHH----------------------TTCC----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             cccCCcHHHHHHHHh----------------------cCCC----C---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence            987654322221110                      0000    0   1123468899999999999999999999999


Q ss_pred             hcCcc
Q 007428          401 LADPY  405 (604)
Q Consensus       401 L~Hp~  405 (604)
                      ++|..
T Consensus       326 ~~~l~  330 (344)
T 1rjb_A          326 TSFLG  330 (344)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98643


No 190
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=6.5e-44  Score=380.77  Aligned_cols=252  Identities=23%  Similarity=0.389  Sum_probs=204.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..++..||||+++... .......+.+|+.+|+.++||||+++++++...     ..
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~  186 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QP  186 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-----SS
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-----CC
Confidence            458999999999999999999999999999999987432 223445688999999999999999999998543     45


Q ss_pred             EEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+|||||. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            899999997 68999987654 6999999999999999999999999999999999999999999999999999754321


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      ... .......+++.|+|||++.+  ..++.++|||||||++|||++ |..||.+.+.......+...            
T Consensus       267 ~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~------------  331 (377)
T 3cbl_A          267 VYA-ASGGLRQVPVKWTAPEALNY--GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG------------  331 (377)
T ss_dssp             EEE-CCSSCCEEEGGGSCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTT------------
T ss_pred             cee-ecCCCCCCCcCcCCHhHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC------------
Confidence            110 00111235778999999876  678999999999999999998 99999887654333222110            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                   ...+     ....+++.+.+||.+||+.||.+|||+.++++
T Consensus       332 -------------~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          332 -------------GRLP-----CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             -------------CCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------CCCC-----CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                         0011     11346788999999999999999999999976


No 191
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=3.9e-43  Score=355.29  Aligned_cols=248  Identities=27%  Similarity=0.448  Sum_probs=192.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC--hhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH--VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~--~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++.+.||+|+||.||+|.+.  |..||||+++.....  ......+.+|+.+++.++||||+++++++...     
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----   78 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-----   78 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-----
Confidence            468999999999999999999874  889999998643221  22346788999999999999999999998543     


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCCCCCeeeCC--------CCcEEE
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN---VFHRDLKPKNILANA--------DCKLKI  257 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKp~NILl~~--------~~~vKL  257 (604)
                      ..+|+||||+. ++|.+++. ...+++..+..++.||+.||.|||++|   |+||||||+|||++.        ++.+||
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl  157 (271)
T 3dtc_A           79 PNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI  157 (271)
T ss_dssp             --CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred             CceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence            45899999997 57777764 568999999999999999999999999   999999999999986        778999


Q ss_pred             eeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q 007428          258 CDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLL  337 (604)
Q Consensus       258 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~l  337 (604)
                      +|||++........     ....||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+.......+..  
T Consensus       158 ~Dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--  228 (271)
T 3dtc_A          158 TDFGLAREWHRTTK-----MSAAGAYAWMAPEVIRA--SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM--  228 (271)
T ss_dssp             CCCCC------------------CCGGGSCHHHHHH--CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT--
T ss_pred             ccCCcccccccccc-----cCCCCccceeCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc--
Confidence            99999976433221     24579999999999877  6799999999999999999999999988765433222111  


Q ss_pred             CCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          338 GTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       338 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                              .....   .....+++.+.+||.+||..||.+|||+.|+++|
T Consensus       229 ------------------------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          229 ------------------------NKLAL---PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             ------------------------SCCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------------------------CCCCC---CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                                    01111   1123567899999999999999999999999875


No 192
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=4.5e-43  Score=360.40  Aligned_cols=270  Identities=23%  Similarity=0.383  Sum_probs=207.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEE----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAV----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++++.||+|+||.||+|.    +..+++.||||+++... .......+.+|+.+|+.++||||+++++++....  
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--   96 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--
Confidence            3569999999999999999998    67789999999997432 2234567889999999999999999999986532  


Q ss_pred             CcccEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                       ...+|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        97 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A           97 -GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             --CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             -CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence             245899999997 599999954 45799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ...............||..|+|||++.+  ..++.++|||||||++|+|++|..||...     ...+....+.......
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~  248 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQ--SKFYIASDVWSFGVTLHELLTYCDSDSSP-----MALFLKMIGPTHGQMT  248 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSH-----HHHHHHHHCSCCGGGH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecC--CCCCcchhHHHHHHHHHHHHHccCCCcch-----hhHHhhccCCcccccC
Confidence            6544332222345678999999999877  67889999999999999999999987432     1222222222222111


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .       ......+......   ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus       249 ~-------~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          249 V-------TRLVNTLKEGKRL---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             H-------HHHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             H-------HHHHHHHhccCCC---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            1       1111111111111   122467899999999999999999999999986


No 193
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2e-43  Score=366.63  Aligned_cols=253  Identities=21%  Similarity=0.367  Sum_probs=206.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-----CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-----HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      .++|++.+.||+|+||.||+|.+.     .++..||||++... ........+.+|+.+|+.++||||+++++++..   
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---   99 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ---   99 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS---
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc---
Confidence            368999999999999999999876     46789999998743 233445678899999999999999999999844   


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcE
Q 007428          187 REFKDIYVVFELME-SDLHQVIKAN----------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL  255 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~----------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~v  255 (604)
                        ....|+||||+. ++|.+++...          ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       100 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~  177 (322)
T 1p4o_A          100 --GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV  177 (322)
T ss_dssp             --SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred             --CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence              345899999998 5999988653          357899999999999999999999999999999999999999999


Q ss_pred             EEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 007428          256 KICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMT  334 (604)
Q Consensus       256 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~  334 (604)
                      ||+|||++......... .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+.......+.
T Consensus       178 kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  254 (322)
T 1p4o_A          178 KIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM  254 (322)
T ss_dssp             EECCTTCCCGGGGGGCE-EGGGSSEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH
T ss_pred             EECcCcccccccccccc-ccccCCCCCCCccChhhhcc--CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH
Confidence            99999999764332211 11233467899999999877  679999999999999999999 899998876544333221


Q ss_pred             hhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          335 DLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       335 ~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..                          .    .......+++.+.+||.+||..||.+|||+.|+++|
T Consensus       255 ~~--------------------------~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          255 EG--------------------------G----LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TT--------------------------C----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cC--------------------------C----cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            10                          0    011224578899999999999999999999999986


No 194
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.5e-43  Score=366.48  Aligned_cols=255  Identities=24%  Similarity=0.379  Sum_probs=199.6

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCC----cEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTG----ERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g----~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ...+|.+.+.||+|+||.||+|.+..++    ..||||+++... .......+.+|+.+|+.++||||+++++++..   
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---  117 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK---  117 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec---
Confidence            4578999999999999999999876553    469999997432 23445678899999999999999999999843   


Q ss_pred             cCcccEEEEEecccc-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          187 REFKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       187 ~~~~~l~lV~E~~~g-~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                        ...+|+||||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       118 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          118 --YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR  195 (333)
T ss_dssp             --SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             --CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence              3568999999985 899998764 579999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ................+|+.|+|||++.+  ..++.++|||||||++|||++ |+.||.+.+....+..+...       
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~-------  266 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAISY--RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-------  266 (333)
T ss_dssp             ---------------CCCGGGSCHHHHHS--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-------
T ss_pred             hhccccccccccCCCCccccccCchhccc--CCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCC-------
Confidence            75433322222233457889999999876  689999999999999999999 99999877654333322110       


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                      .  ..+     ....+++.+.+||.+||..||.+||++.+++++
T Consensus       267 ----------------~--~~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          267 ----------------F--RLP-----TPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             ----------------C--CCC-----CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ----------------C--cCC-----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            0  011     123567889999999999999999999999874


No 195
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=9.6e-44  Score=377.09  Aligned_cols=268  Identities=16%  Similarity=0.145  Sum_probs=200.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCC-----CcEEEEEEeccccCChhH---------HHHHHHHHHHHHHcCCCCeeEE
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHT-----GERVAIKKINDVFEHVSD---------ATRILREIKLLRLLRHPDIVEI  177 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~-----g~~vAIK~i~~~~~~~~~---------~~~~~~Ei~iL~~l~HpnIv~l  177 (604)
                      .++|++.+.||+|+||.||+|.+..+     ++.||||++.........         ...+..|+..++.++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            46899999999999999999998764     588999998642211000         1123456666777889999999


Q ss_pred             eeeecCCCccCcccEEEEEecccccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC--CCCc
Q 007428          178 KHIMLPPSRREFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN--ADCK  254 (604)
Q Consensus       178 ~~~~~~~~~~~~~~l~lV~E~~~g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~--~~~~  254 (604)
                      ++++.... .....+|||||||+++|.+++... ..+++..+..|+.||+.||.|||++||+||||||+|||++  .++.
T Consensus       114 ~~~~~~~~-~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~  192 (364)
T 3op5_A          114 WGSGLHDK-NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ  192 (364)
T ss_dssp             EEEEEEEE-TTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred             Eeeeeecc-CCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence            99986432 223568999999988999999876 6799999999999999999999999999999999999999  8899


Q ss_pred             EEEeeccccccccCCCCCc----ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHH
Q 007428          255 LKICDFGLARVSFNDAPSA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQL  330 (604)
Q Consensus       255 vKL~DFGla~~~~~~~~~~----~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l  330 (604)
                      +||+|||+++.........    ......+||+.|+|||++.+  ..++.++|||||||+||||++|+.||.+.......
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~  270 (364)
T 3op5_A          193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG--VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY  270 (364)
T ss_dssp             EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC--CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence            9999999997653322111    11234569999999999987  67999999999999999999999999864322211


Q ss_pred             HHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          331 DLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       331 ~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .......           ........+....         ....+++.+.+||.+||..||.+||++.++++
T Consensus       271 ~~~~~~~-----------~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          271 VRDSKIR-----------YRENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHH-----------HHHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHH-----------hhhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            1111000           0000111111110         01356788999999999999999999999887


No 196
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4e-43  Score=353.99  Aligned_cols=249  Identities=14%  Similarity=0.187  Sum_probs=204.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+.  +..||||+++...........+.+|+.+|+.++||||+++++++....   ...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~   83 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP---APH   83 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT---SSS
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC---CCC
Confidence            468999999999999999999884  889999999765445556678999999999999999999999986542   246


Q ss_pred             EEEEEeccc-ccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--CccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          192 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~g--IiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      +|+||||+. ++|.+++....  .+++..+..++.||+.||.|||++|  |+||||||+|||++.++.++|+|||++...
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            899999998 59999998765  4899999999999999999999999  999999999999999999999999987542


Q ss_pred             cCCCCCcccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      .        .....||+.|+|||++.+. ...++.++|||||||++|||++|+.||.+.+.......+...         
T Consensus       164 ~--------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---------  226 (271)
T 3kmu_A          164 Q--------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE---------  226 (271)
T ss_dssp             S--------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS---------
T ss_pred             c--------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc---------
Confidence            1        1335789999999998752 123344799999999999999999999887654433222110         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                       ...   ......+++.+.+||.+||+.||.+|||++++++
T Consensus       227 -----------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          227 -----------------GLR---PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             -----------------CCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                             000   0112457889999999999999999999999987


No 197
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.9e-43  Score=368.53  Aligned_cols=257  Identities=21%  Similarity=0.320  Sum_probs=203.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEE-----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAV-----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~-----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      .++|++.+.||+|+||.||+|.     +..++..||||++... ........+.+|+.+|+.++||||+++++++...  
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--  105 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--  105 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC--
Confidence            4689999999999999999998     5668889999998643 2334566788999999999999999999998543  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC---CcE
Q 007428          187 REFKDIYVVFELME-SDLHQVIKAND-------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKL  255 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~~~-------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~---~~v  255 (604)
                         ..+|+||||+. ++|.+++....       .+++..+..++.||+.||.|||++||+||||||+|||++.+   ..+
T Consensus       106 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          106 ---LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             ---SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred             ---CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence               45799999996 69999998653       48999999999999999999999999999999999999844   469


Q ss_pred             EEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 007428          256 KICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMT  334 (604)
Q Consensus       256 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~  334 (604)
                      ||+|||++.......... ......||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+.+....+..+.
T Consensus       183 kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  259 (327)
T 2yfx_A          183 KIGDFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFME--GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT  259 (327)
T ss_dssp             EECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             EECccccccccccccccc-cCCCcCCCcceeCHhHhcC--CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence            999999997543322111 1234578999999999877  679999999999999999998 999998876544333222


Q ss_pred             hhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          335 DLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       335 ~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                      ..                          ..+    .....+++.+.+||.+||..||.+|||+.++++|.|+-
T Consensus       260 ~~--------------------------~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          260 SG--------------------------GRM----DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             TT--------------------------CCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cC--------------------------CCC----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            10                          000    11235688999999999999999999999999999874


No 198
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=5.6e-43  Score=358.32  Aligned_cols=258  Identities=21%  Similarity=0.247  Sum_probs=202.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|++..+|+.||||++.....    ...+.+|+.+++.++|++++..+..+.    .....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~   79 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDY   79 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCcccccc----CCCCc
Confidence            5689999999999999999999999999999999864322    235789999999999988776665553    23356


Q ss_pred             EEEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeecccccccc
Q 007428          192 IYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVSF  267 (604)
Q Consensus       192 l~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla~~~~  267 (604)
                      .|+||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           80 NVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             eEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            899999998899999974 4579999999999999999999999999999999999999   478999999999998754


Q ss_pred             CCCCCc----ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          268 NDAPSA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       268 ~~~~~~----~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ......    .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+......            .+
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~  225 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK------------RQ  225 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS------------SS
T ss_pred             ccccccccccccccccccccccCChhhhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh------------hh
Confidence            433211    11245689999999999987  6799999999999999999999999987432110            00


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .+..+.......           +.....+.+++.+.+||.+||+.||.+|||+.++++
T Consensus       226 ~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          226 KYERISEKKMST-----------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHHHS-----------CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhhcccccCC-----------chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            111111110000           000112356788999999999999999999999987


No 199
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=3.2e-43  Score=363.52  Aligned_cols=255  Identities=25%  Similarity=0.429  Sum_probs=206.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEE-----CCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVD-----THTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~-----~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++... .......+.+|+.+|+.+ +||||+++++++....
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  104 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG  104 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence            46899999999999999999984     4578899999997532 234456789999999999 6999999999985432


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCee
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKANDD----------------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL  248 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~~~----------------l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NIL  248 (604)
                          ..+|+|||||. ++|.+++.....                +++..+..++.||+.||.|||+.||+||||||+|||
T Consensus       105 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          105 ----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             ----SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ----CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence                35899999998 599999987653                899999999999999999999999999999999999


Q ss_pred             eCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChH
Q 007428          249 ANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVV  327 (604)
Q Consensus       249 l~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~  327 (604)
                      ++.++.+||+|||+++....... ........||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+....
T Consensus       181 ~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  257 (316)
T 2xir_A          181 LSEKNVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  257 (316)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTT-SEEETTEEECGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             ECCCCCEEECCCccccccccCcc-ceeccCCCcceeecCchhhcc--ccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence            99999999999999986543322 122344578999999999877  689999999999999999998 99999876532


Q ss_pred             HHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          328 HQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       328 ~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..+.....                      ...    ..   .....+++.+.+||.+||..||.+|||+.++++|
T Consensus       258 ~~~~~~~~----------------------~~~----~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          258 EEFCRRLK----------------------EGT----RM---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHHH----------------------HTC----CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhc----------------------cCc----cC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            22211100                      000    00   1123468899999999999999999999999986


No 200
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.3e-43  Score=385.74  Aligned_cols=260  Identities=27%  Similarity=0.384  Sum_probs=191.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .+.|.+.+.||+|+||+||.+ ...+|+.||||++...     ....+.+|+.+|+.+ +||||+++++++..     ..
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-----~~   82 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETT-----DR   82 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----SS
T ss_pred             hheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CC
Confidence            346888899999999999875 4568999999998532     234578999999876 89999999998843     45


Q ss_pred             cEEEEEecccccHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCC-----------
Q 007428          191 DIYVVFELMESDLHQVIKANDDL-------TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-----------  252 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~~~~l-------~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~-----------  252 (604)
                      .+|||||||+++|.+++......       ++..+..++.||+.||.|||++||+||||||+|||++.+           
T Consensus        83 ~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~  162 (434)
T 2rio_A           83 FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGA  162 (434)
T ss_dssp             EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred             eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCC
Confidence            69999999999999999865433       233457799999999999999999999999999999754           


Q ss_pred             --CcEEEeeccccccccCCCCC-cccccccccCcccccccccccc-----CCCCCccCchhhHHHHHHHHHh-CCCCCCC
Q 007428          253 --CKLKICDFGLARVSFNDAPS-AIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAEMLT-GKPLFPG  323 (604)
Q Consensus       253 --~~vKL~DFGla~~~~~~~~~-~~~~~~~~gT~~Y~APE~l~~~-----~~~~~~k~DIWSlGvil~eLlt-G~~PF~~  323 (604)
                        +.+||+|||+++........ .......+||+.|+|||++.+.     ...++.++|||||||++|||++ |..||.+
T Consensus       163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence              48999999999876433221 1112456899999999998641     2468999999999999999999 9999976


Q ss_pred             CChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          324 KNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       324 ~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..... ...+....                        . .+.........+++.+.+||.+||+.||.+|||+.++|+|
T Consensus       243 ~~~~~-~~i~~~~~------------------------~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  296 (434)
T 2rio_A          243 KYSRE-SNIIRGIF------------------------S-LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH  296 (434)
T ss_dssp             TTTHH-HHHHHTCC------------------------C-CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             chhhH-HHHhcCCC------------------------C-cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence            54321 11111000                        0 0000000111245779999999999999999999999999


Q ss_pred             ccccc
Q 007428          404 PYFHG  408 (604)
Q Consensus       404 p~f~~  408 (604)
                      |||..
T Consensus       297 p~f~~  301 (434)
T 2rio_A          297 PLFWP  301 (434)
T ss_dssp             GGGSC
T ss_pred             CccCC
Confidence            99964


No 201
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.3e-43  Score=362.64  Aligned_cols=259  Identities=20%  Similarity=0.241  Sum_probs=200.8

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++.....    ...+.+|+.+++.++|++++..+..+.    ....
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~   78 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGD   78 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETT
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeec----CCCC
Confidence            35689999999999999999999999999999998754222    234678999999999888777666653    2335


Q ss_pred             cEEEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeeccccccc
Q 007428          191 DIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVS  266 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla~~~  266 (604)
                      ..|+||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+++..
T Consensus        79 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           79 YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            6899999998899999974 4579999999999999999999999999999999999999   78899999999999875


Q ss_pred             cCCCCCc----ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          267 FNDAPSA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       267 ~~~~~~~----~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      .......    .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||.+.+......           
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----------  225 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLG--IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-----------  225 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-----------
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcC--CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-----------
Confidence            4433211    11235689999999999987  679999999999999999999999998754321111           


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                       .+..+......           .+.......+++.+.+||.+||+.||.+|||+.++++
T Consensus       226 -~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          226 -KYERISEKKMS-----------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -HHHHHHHHHHH-----------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -hhhhhhccccc-----------chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence             11111111000           0011112346788999999999999999999999987


No 202
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=8.1e-44  Score=365.41  Aligned_cols=263  Identities=25%  Similarity=0.329  Sum_probs=196.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHH--cCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRL--LRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++..     .....+.+|.+++..  ++||||+++++++.... ...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~   78 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSS-----RDEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSS   78 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecc-----ccchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCC
Confidence            46899999999999999999987  689999999863     234556678888777  78999999999875432 234


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCccccCCCCCeeeCCCCcEEEeec
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH--------TANVFHRDLKPKNILANADCKLKICDF  260 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH--------~~gIiHrDLKp~NILl~~~~~vKL~DF  260 (604)
                      ..+|+||||+. ++|.+++. ...+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||+||
T Consensus        79 ~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df  157 (301)
T 3q4u_A           79 TQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL  157 (301)
T ss_dssp             EEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred             ceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence            56899999998 58999985 457999999999999999999999        999999999999999999999999999


Q ss_pred             cccccccCCCCCc-ccccccccCccccccccccccCC----CCCccCchhhHHHHHHHHHhC----------CCCCCCCC
Q 007428          261 GLARVSFNDAPSA-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEMLTG----------KPLFPGKN  325 (604)
Q Consensus       261 Gla~~~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~----~~~~k~DIWSlGvil~eLltG----------~~PF~~~~  325 (604)
                      |+++......... ......+||+.|+|||++.+...    .++.++|||||||++|||++|          ..||.+..
T Consensus       158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~  237 (301)
T 3q4u_A          158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV  237 (301)
T ss_dssp             TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence            9997654332211 11234589999999999876211    345789999999999999999          88886532


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      ...           .....        ..............+........++.+.+||.+||+.||.+|||+.++++
T Consensus       238 ~~~-----------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          238 PND-----------PSFED--------MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             CSS-----------CCHHH--------HHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCC-----------cchhh--------hhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            100           00000        00000000011111100011124567999999999999999999999986


No 203
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.3e-43  Score=369.75  Aligned_cols=270  Identities=23%  Similarity=0.377  Sum_probs=210.1

Q ss_pred             CCCCeEEeeEeeecCceEEEEEE----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAV----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSR  186 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~  186 (604)
                      ...+|++++.||+|+||.||+|.    +..++..||||++...  .......+.+|+.+|+.++||||+++++++...  
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--   96 (327)
T 3lxl_A           21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP--   96 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--
Confidence            34689999999999999999998    5678999999999642  334556789999999999999999999988643  


Q ss_pred             cCcccEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          187 REFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       187 ~~~~~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                       ....+|+||||++ ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        97 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A           97 -GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             -SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             -CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccce
Confidence             3356899999996 689999976 3569999999999999999999999999999999999999999999999999998


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC-Chh
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP-STE  343 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p-~~~  343 (604)
                      ................||+.|+|||++.+  ..++.++|||||||++|+|++|..||........ .    ..... ...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~----~~~~~~~~~  248 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPESLSD--NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL-R----MMGCERDVP  248 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-H----HCC----CC
T ss_pred             ecccCCccceeeccCCccccccCHHHhcc--CCCChHHhHHHHHHHHHHHHhCCCCCccccchhh-h----hcccccccc
Confidence            76443332223344578999999999877  6789999999999999999999999975332110 0    00000 000


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ...        .....+......   ...+.+++.+.+||.+||..||.+|||+.+++++
T Consensus       249 ~~~--------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          249 ALS--------RLLELLEEGQRL---PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHH--------HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cHH--------HHHHHhhcccCC---CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            000        111111111111   1234678999999999999999999999999764


No 204
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.8e-43  Score=372.21  Aligned_cols=266  Identities=15%  Similarity=0.149  Sum_probs=199.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECC---CCcEEEEEEeccccCChh---------HHHHHHHHHHHHHHcCCCCeeEEee
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTH---TGERVAIKKINDVFEHVS---------DATRILREIKLLRLLRHPDIVEIKH  179 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~---~g~~vAIK~i~~~~~~~~---------~~~~~~~Ei~iL~~l~HpnIv~l~~  179 (604)
                      .++|++.+.||+|+||.||+|.+..   ++..||||++........         ....+.+|+.+++.+.||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            4689999999999999999999987   888999999864321111         1123567889999999999999999


Q ss_pred             eecCCCccCcccEEEEEecccccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCC--cEEE
Q 007428          180 IMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC--KLKI  257 (604)
Q Consensus       180 ~~~~~~~~~~~~l~lV~E~~~g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~--~vKL  257 (604)
                      ++.... .....+|+|||||+++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++  .+||
T Consensus       116 ~~~~~~-~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL  194 (345)
T 2v62_A          116 SGLTEF-KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYL  194 (345)
T ss_dssp             EEEEES-SSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEE
T ss_pred             cccccc-CCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEE
Confidence            986522 2345799999999889999998777899999999999999999999999999999999999998887  9999


Q ss_pred             eeccccccccCCCC----CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCC--hHHHHH
Q 007428          258 CDFGLARVSFNDAP----SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN--VVHQLD  331 (604)
Q Consensus       258 ~DFGla~~~~~~~~----~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~--~~~~l~  331 (604)
                      +|||+++.......    .........||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+..  ......
T Consensus       195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  272 (345)
T 2v62_A          195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG--VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT  272 (345)
T ss_dssp             CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT--CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred             EeCCCceecccccccccchhccccccCCCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence            99999976532211    1111245689999999999887  679999999999999999999999996532  211111


Q ss_pred             HHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          332 LMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       332 ~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .........+...         ...       .      ....+++.+.+||.+||..||.+|||++++++
T Consensus       273 ~~~~~~~~~~~~~---------~~~-------~------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          273 AKTNLLDELPQSV---------LKW-------A------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHTTTHHH---------HHH-------S------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhhcccccHHH---------Hhh-------c------cccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            1111111100000         000       0      01256889999999999999999999999987


No 205
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=6.6e-43  Score=365.86  Aligned_cols=253  Identities=25%  Similarity=0.402  Sum_probs=205.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEEC-------CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDT-------HTGERVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~-------~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|.+.       .++..||||+++... .......+.+|+.+|+.+ +||||+++++++..
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            468999999999999999999875       467889999987432 334567789999999999 89999999999854


Q ss_pred             CCccCcccEEEEEeccc-ccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCC
Q 007428          184 PSRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN  246 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~~~-g~L~~~i~~~~----------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~N  246 (604)
                           ...+|+||||+. ++|.+++....                .+++..+..++.||+.||.|||++||+||||||+|
T Consensus       113 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  187 (334)
T 2pvf_A          113 -----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  187 (334)
T ss_dssp             -----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             -----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence                 345899999997 59999998654                38999999999999999999999999999999999


Q ss_pred             eeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCC
Q 007428          247 ILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKN  325 (604)
Q Consensus       247 ILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~  325 (604)
                      ||++.++.+||+|||++......... .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+..
T Consensus       188 Ill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~  264 (334)
T 2pvf_A          188 VLVTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  264 (334)
T ss_dssp             EEECTTCCEEECCCTTCEECTTTSSE-ECCSCCCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEcCCCCEEEccccccccccccccc-cccCCCCcccceeChHHhcC--CCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence            99999999999999999865432211 11233467889999999876  678999999999999999999 999998876


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      .......+...                       .    .   ......+++.+.+||.+||..||.+|||+.|++++
T Consensus       265 ~~~~~~~~~~~-----------------------~----~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          265 VEELFKLLKEG-----------------------H----R---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHHHHHHT-----------------------C----C---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcC-----------------------C----C---CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            54333222110                       0    0   01123568899999999999999999999999874


No 206
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=6.4e-43  Score=356.24  Aligned_cols=251  Identities=23%  Similarity=0.382  Sum_probs=201.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECC---CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTH---TGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~---~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|++.+.||+|+||.||+|.+..   ++..||||++.... .......+.+|+.+|+.++||||+++++++...    
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----   85 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE----   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS----
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC----
Confidence            3589999999999999999998653   34579999987532 334567789999999999999999999997432    


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                        ..|+||||+. ++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        86 --~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           86 --PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             --SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             --CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence              3599999998 68999997654 5999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......  ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||...........+...         
T Consensus       164 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~---------  230 (281)
T 3cc6_A          164 EDEDYY--KASVTRLPIKWMSPESINF--RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG---------  230 (281)
T ss_dssp             -----------CCCCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT---------
T ss_pred             cccccc--ccccCCCCcceeCchhhcc--CCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC---------
Confidence            332211  1233467889999999876  689999999999999999998 99999876544333222110         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                      ...+     ....+++.+.+||.+||..||.+|||+.|++++
T Consensus       231 ----------------~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          231 ----------------DRLP-----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             ----------------CCCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCC-----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                            0001     113467889999999999999999999999874


No 207
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.7e-43  Score=358.60  Aligned_cols=255  Identities=22%  Similarity=0.335  Sum_probs=206.6

Q ss_pred             CCCeEEee-EeeecCceEEEEEEEC--CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQE-VIGKGSYGVVGSAVDT--HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~-~LG~G~fG~Vy~a~~~--~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||||+++.. ........+.+|+.+|+.++||||+++++++..     
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-----   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-----
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-----
Confidence            35687877 9999999999999854  46889999999753 233456778999999999999999999999832     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                       ..+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus        82 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           82 -EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             -SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             -CCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence             24899999998 4899988644 46999999999999999999999999999999999999999999999999999875


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ..............||+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+.......+..          
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~----------  228 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ----------  228 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT----------
T ss_pred             ccCcceeeccccccccccccCHHHhcc--CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc----------
Confidence            433322222233467899999999876  678999999999999999998 9999987665433322211          


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPY  405 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~  405 (604)
                                       ...   ....+.+++.+.+||.+||..||.+||++.++++|.+
T Consensus       229 -----------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          229 -----------------GKR---MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             -----------------TCC---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             -----------------CCc---CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence                             000   0122467899999999999999999999999998754


No 208
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=2.3e-43  Score=360.34  Aligned_cols=245  Identities=18%  Similarity=0.283  Sum_probs=198.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCC-------cEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTG-------ERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPP  184 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g-------~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~  184 (604)
                      .++|++.+.||+|+||.||+|.+..++       ..||+|++...  .......+.+|+.+|+.++||||+++++++...
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            468999999999999999999998877       47999998643  234457789999999999999999999998543


Q ss_pred             CccCcccEEEEEeccc-ccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc--------
Q 007428          185 SRREFKDIYVVFELME-SDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--------  254 (604)
Q Consensus       185 ~~~~~~~l~lV~E~~~-g~L~~~i~~~~~-l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~--------  254 (604)
                           ...|+||||+. ++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||++.++.        
T Consensus        85 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  159 (289)
T 4fvq_A           85 -----DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF  159 (289)
T ss_dssp             -----TCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred             -----CCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence                 35799999998 699999987654 999999999999999999999999999999999999998887        


Q ss_pred             EEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhC-CCCCCCCChHHHHHHH
Q 007428          255 LKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTG-KPLFPGKNVVHQLDLM  333 (604)
Q Consensus       255 vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG-~~PF~~~~~~~~l~~i  333 (604)
                      +||+|||++.....       .....||+.|+|||++.+. ..++.++|||||||++|+|++| .+||............
T Consensus       160 ~kl~Dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~  231 (289)
T 4fvq_A          160 IKLSDPGISITVLP-------KDILQERIPWVPPECIENP-KNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY  231 (289)
T ss_dssp             EEECCCCSCTTTSC-------HHHHHHTTTTSCHHHHHCG-GGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             eeeccCcccccccC-------ccccCCcCcccCHHHhCCC-CCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence            99999999864321       1234689999999998752 4689999999999999999995 4566554432222111


Q ss_pred             HhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          334 TDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       334 ~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..                         ...       .....++.+.+||.+||+.||.+|||+.++++|
T Consensus       232 ~~-------------------------~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          232 ED-------------------------RHQ-------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HT-------------------------TCC-------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hc-------------------------cCC-------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            00                         001       112335678999999999999999999999985


No 209
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=4.1e-43  Score=367.29  Aligned_cols=251  Identities=22%  Similarity=0.363  Sum_probs=197.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEE----EEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERV----AIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~v----AIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++++.||+|+||.||+|.+..+++.|    |+|.+... ........+.+|+.+|+.++||||+++++++...   
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---   89 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---   89 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---
Confidence            468999999999999999999998888766    55655432 2233567789999999999999999999998643   


Q ss_pred             CcccEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                         ..++||||+. ++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        90 ---~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~  166 (327)
T 3lzb_A           90 ---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             ---SEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred             ---CceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence               3688999987 689998876 45799999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      ....... .......||+.|+|||++.+  ..|+.++|||||||++|||++ |..||.+.........+...        
T Consensus       167 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~--------  235 (327)
T 3lzb_A          167 LGAEEKE-YHAEGGKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--------  235 (327)
T ss_dssp             --------------CCCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT--------
T ss_pred             ccCcccc-ccccCCCccccccCHHHHcC--CCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC--------
Confidence            5433221 11234567889999999987  689999999999999999999 99999887654433222110        


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                         ...   ...+.+++.+.+||.+||..||.+|||+.|+++
T Consensus       236 -------------------~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          236 -------------------ERL---PQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             -------------------CCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------------------CCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                               000   112346788999999999999999999999987


No 210
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=6.8e-43  Score=352.35  Aligned_cols=249  Identities=24%  Similarity=0.389  Sum_probs=204.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+. ++..||||++.....   ....+.+|+.+++.++||||+++++++...     ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~   77 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----AP   77 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SS
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CC
Confidence            468999999999999999999986 678999999975322   235688999999999999999999998543     45


Q ss_pred             EEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||++ ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  157 (267)
T 3t9t_A           78 ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  157 (267)
T ss_dssp             CEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             eEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence            899999997 5899999765 46899999999999999999999999999999999999999999999999999764321


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHH
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRI  348 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~  348 (604)
                      .  ........+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+.......+...            
T Consensus       158 ~--~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~------------  221 (267)
T 3t9t_A          158 Q--YTSSTGTKFPVKWASPEVFSF--SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG------------  221 (267)
T ss_dssp             H--HHSTTSTTCCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT------------
T ss_pred             c--ccccccccccccccChhhhcC--CCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC------------
Confidence            1  111233467889999999876  678999999999999999999 89999887654433322110            


Q ss_pred             hhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          349 RNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       349 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                 ...       ......++.+.+||.+||..||.+|||+.+++++
T Consensus       222 -----------~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          222 -----------FRL-------YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             -----------CCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CcC-------CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                       000       0112457889999999999999999999999874


No 211
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=8.2e-43  Score=364.11  Aligned_cols=253  Identities=24%  Similarity=0.389  Sum_probs=205.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCc-----EEEEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGE-----RVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPS  185 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~-----~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~  185 (604)
                      .++|++.+.||+|+||.||+|.+..++.     .||||+++... .......+.+|+.+|+.+ +||||+++++++... 
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-  122 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHG-  122 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC-
Confidence            4689999999999999999999877664     79999986532 334567789999999999 899999999998543 


Q ss_pred             ccCcccEEEEEeccc-ccHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC
Q 007428          186 RREFKDIYVVFELME-SDLHQVIKAN--------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN  250 (604)
Q Consensus       186 ~~~~~~l~lV~E~~~-g~L~~~i~~~--------------~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~  250 (604)
                          ..+|+|||||. ++|.+++...              ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus       123 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          123 ----GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ----SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             ----CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence                45899999997 5999988653              3589999999999999999999999999999999999999


Q ss_pred             CCCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHH
Q 007428          251 ADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQ  329 (604)
Q Consensus       251 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~  329 (604)
                      .++.+||+|||++......... .......||+.|+|||++.+  ..++.++|||||||++|+|++ |..||.+......
T Consensus       199 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  275 (333)
T 2i1m_A          199 NGHVAKIGDFGLARDIMNDSNY-IVKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK  275 (333)
T ss_dssp             GGGEEEBCCCGGGCCGGGCTTS-EECSSCEECGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH
T ss_pred             CCCeEEECccccccccccccce-eecCCCCCCccccCHHHhcc--CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH
Confidence            9999999999999865433321 12234567889999999877  679999999999999999998 9999987654332


Q ss_pred             HHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          330 LDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       330 l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      +..+..                      .....       ......++.+.+||.+||..||.+|||+.++++
T Consensus       276 ~~~~~~----------------------~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          276 FYKLVK----------------------DGYQM-------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHHHHH----------------------HTCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHh----------------------cCCCC-------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            221111                      00000       011335788999999999999999999999987


No 212
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=6.1e-44  Score=371.37  Aligned_cols=268  Identities=23%  Similarity=0.320  Sum_probs=204.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+ .+|..||||++...  .......+.+|+.+|+.++||||+++++++..     ...
T Consensus        38 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~  109 (321)
T 2qkw_B           38 TNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNE  109 (321)
T ss_dssp             CCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC-----TTC
T ss_pred             HhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----CCe
Confidence            46899999999999999999986 47899999988643  23456778999999999999999999999843     346


Q ss_pred             EEEEEeccc-ccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          192 IYVVFELME-SDLHQVIKAND----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~----~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      +|+||||+. ++|.+++....    .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            899999998 58988886543    5899999999999999999999999999999999999999999999999999764


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESIS  346 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~  346 (604)
                      ...... .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.+.........+..           
T Consensus       190 ~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~-----------  255 (321)
T 2qkw_B          190 TELDQT-HLSTVVKGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW-----------  255 (321)
T ss_dssp             SSSSCC-CCBCCCEEETTTCCHHHHHH--CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHH-----------
T ss_pred             cccccc-ccccccCCCccccCHHHhcC--CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHH-----------
Confidence            322221 11244579999999999876  6799999999999999999999999987543221111000           


Q ss_pred             HHhhHHHHHHhhhcccC-CCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcc
Q 007428          347 RIRNEKARRYLGSMRKK-QPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPY  405 (604)
Q Consensus       347 ~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~  405 (604)
                        ....  .....+... .+.......+..+..+.+||.+||+.||.+|||+.|+++|..
T Consensus       256 --~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          256 --AVES--HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             --THHH--HTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             --hhhc--cccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence              0000  000000000 010111112234567899999999999999999999998643


No 213
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.9e-43  Score=367.17  Aligned_cols=250  Identities=25%  Similarity=0.386  Sum_probs=201.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEE--EEEEeccccCChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERV--AIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~v--AIK~i~~~~~~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~  188 (604)
                      .++|++.+.||+|+||.||+|.+..++..+  |||.++.. ........+.+|+.+|+.+ +||||+++++++.     .
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~   97 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----H   97 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEE-----E
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeee-----e
Confidence            358999999999999999999998888865  99988642 2223456688999999999 8999999999984     3


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC
Q 007428          189 FKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA  251 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~----------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~  251 (604)
                      ...+|+||||++ ++|.+++....                .+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~  177 (327)
T 1fvr_A           98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  177 (327)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcC
Confidence            456999999997 59999997654                6999999999999999999999999999999999999999


Q ss_pred             CCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHH
Q 007428          252 DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQL  330 (604)
Q Consensus       252 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l  330 (604)
                      ++.+||+|||+++.......    .....+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+.....
T Consensus       178 ~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~  251 (327)
T 1fvr_A          178 NYVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY  251 (327)
T ss_dssp             GGCEEECCTTCEESSCEECC----C----CCTTTCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             CCeEEEcccCcCcccccccc----ccCCCCCccccChhhhcc--ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH
Confidence            99999999999974322111    133467889999999876  678999999999999999998 99999887654332


Q ss_pred             HHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          331 DLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       331 ~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..+..                           ....   .....+++.+.+||.+||..||.+|||++++++|
T Consensus       252 ~~~~~---------------------------~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          252 EKLPQ---------------------------GYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHGGG---------------------------TCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhhc---------------------------CCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            22111                           0000   1123568899999999999999999999999985


No 214
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=1.9e-42  Score=355.34  Aligned_cols=253  Identities=23%  Similarity=0.365  Sum_probs=200.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCC---CcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHT---GERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~---g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .+|++.+.||+|+||.||+|.+..+   +..||+|.+... ........+.+|+.+|+.++||||+++++++...    .
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~   99 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----E   99 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----S
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC----C
Confidence            4799999999999999999986543   346899998752 3344567789999999999999999999987533    2


Q ss_pred             ccEEEEEecccc-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          190 KDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       190 ~~l~lV~E~~~g-~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...|+||||+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       100 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          100 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             CceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence            457999999985 999999763 468999999999999999999999999999999999999999999999999997653


Q ss_pred             CCCC-CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          268 NDAP-SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       268 ~~~~-~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      .... .........||+.|+|||++.+  ..++.++|||||||++|+|++ |.+||.+.+..+....+...         
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~---------  248 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG---------  248 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT---------
T ss_pred             ccchhccccccCCCCCccccChHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC---------
Confidence            3221 1112244578899999999977  689999999999999999999 66788776543333222110         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                       ..+    .....+++.+.+||.+||..||.+|||+.|+++
T Consensus       249 -----------------~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          249 -----------------RRL----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -----------------CCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------------CCC----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                             000    011346788999999999999999999999987


No 215
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.4e-43  Score=370.93  Aligned_cols=261  Identities=12%  Similarity=0.164  Sum_probs=199.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCC--------CcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHT--------GERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~--------g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~  183 (604)
                      .++|++.+.||+|+||.||+|.+..+        ++.||||++...       ..+.+|+.+|+.++||||+++++.+..
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            46899999999999999999999874        889999998642       357799999999999999984332211


Q ss_pred             C-----------CccCcccEEEEEecccccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC
Q 007428          184 P-----------SRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN  250 (604)
Q Consensus       184 ~-----------~~~~~~~l~lV~E~~~g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~  250 (604)
                      .           .......+|+|||||+++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred             CCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence            0           00124568999999988999999876  6899999999999999999999999999999999999999


Q ss_pred             CCC--cEEEeeccccccccCCCCC----cccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCC
Q 007428          251 ADC--KLKICDFGLARVSFNDAPS----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGK  324 (604)
Q Consensus       251 ~~~--~vKL~DFGla~~~~~~~~~----~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~  324 (604)
                      .++  .+||+|||+++........    ........||+.|+|||++.+  ..++.++|||||||+||||++|+.||.+.
T Consensus       194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG--CGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            998  8999999999765332211    111234589999999999987  68999999999999999999999999875


Q ss_pred             C-hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          325 N-VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       325 ~-~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      . ....+....                   ..+.....  ........+..+++.+.+||.+||..||.+|||++++++
T Consensus       272 ~~~~~~~~~~~-------------------~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          272 LPNTEDIMKQK-------------------QKFVDKPG--PFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             TTCHHHHHHHH-------------------HHHHHSCC--CEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CcCHHHHHHHH-------------------HhccCChh--hhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            3 211111110                   00000000  000011122356899999999999999999999999987


No 216
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=3.7e-42  Score=355.59  Aligned_cols=253  Identities=25%  Similarity=0.417  Sum_probs=193.6

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccc-cCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDV-FEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~-~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ..++|++.+.||+|+||.||+|.+..+|..||||++... .........+.+|+.+|+.++||||+++++++..     .
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~  104 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----D  104 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----T
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----C
Confidence            346899999999999999999999999999999999742 2234456778899999999999999999999853     3


Q ss_pred             ccEEEEEecccc-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          190 KDIYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       190 ~~l~lV~E~~~g-~L~~~i~~----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      ..+|+||||+.+ +|.+++..    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR  184 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence            468999999985 89888864    4569999999999999999999999999999999999999999999999999997


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCh
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVV--HQLDLMTDLLGTPST  342 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~--~~l~~i~~~lg~p~~  342 (604)
                      .......   ......||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+....  .....+         
T Consensus       185 ~~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---------  250 (310)
T 2wqm_A          185 FFSSKTT---AAHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI---------  250 (310)
T ss_dssp             -----------------CCSSCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH---------
T ss_pred             eecCCCc---cccccCCCeeEeChHHhCC--CCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh---------
Confidence            6533221   1234579999999999877  67899999999999999999999999764311  100000         


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                     ...  ..+   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       251 ---------------~~~--~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          251 ---------------EQC--DYP---PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             ---------------HTT--CSC---CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------hcc--cCC---CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                           000  000   0112356889999999999999999999999987


No 217
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=5.1e-43  Score=356.10  Aligned_cols=248  Identities=28%  Similarity=0.384  Sum_probs=203.7

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-------
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------  185 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-------  185 (604)
                      .+|++.+.||+|+||.||+|.+..+|+.||||+++...      ..+.+|+.+++.++||||+++++++....       
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            47999999999999999999999999999999986421      24568999999999999999999874311       


Q ss_pred             ----ccCcccEEEEEecccc-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEe
Q 007428          186 ----RREFKDIYVVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC  258 (604)
Q Consensus       186 ----~~~~~~l~lV~E~~~g-~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~  258 (604)
                          ......+|+||||+++ +|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence                1223568999999995 999999754  579999999999999999999999999999999999999999999999


Q ss_pred             eccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q 007428          259 DFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLG  338 (604)
Q Consensus       259 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg  338 (604)
                      |||++........    .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||....     ..      
T Consensus       165 Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~------  227 (284)
T 2a19_B          165 DFGLVTSLKNDGK----RTRSKGTLRYMSPEQISS--QDYGKEVDLYALGLILAELLHVCDTAFETS-----KF------  227 (284)
T ss_dssp             CCTTCEESSCCSC----CCCCCSCCTTSCHHHHHC--SCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----HH------
T ss_pred             cchhheecccccc----ccccCCcccccChhhhcc--CCCcchhhhHHHHHHHHHHHhcCCcchhHH-----HH------
Confidence            9999986543322    234579999999999877  678999999999999999999998873211     00      


Q ss_pred             CCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          339 TPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       339 ~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                            ..        .    ....      .....+++.+.+||.+||..||.+|||+.|+++|+|.-
T Consensus       228 ------~~--------~----~~~~------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          228 ------FT--------D----LRDG------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             ------HH--------H----HHTT------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ------HH--------H----hhcc------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                  00        0    0000      01134678899999999999999999999999998864


No 218
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.3e-42  Score=352.90  Aligned_cols=253  Identities=26%  Similarity=0.386  Sum_probs=201.1

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCc---EEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGE---RVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~---~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      -.|.+.+.||+|+||.||+|.+..++.   .||+|++... ........+.+|+.+|+.++||||+++++++....    
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----   95 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE----   95 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC----
Confidence            357888999999999999998765544   7999998752 33345677899999999999999999999986432    


Q ss_pred             ccEEEEEeccc-ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          190 KDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             CCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            23489999986 789999976 4578999999999999999999999999999999999999999999999999997543


Q ss_pred             CCCC-CcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          268 NDAP-SAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTG-KPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       268 ~~~~-~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG-~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      .... .........+|+.|+|||++.+  ..++.++|||||||++|+|++| .+||.+.+.......+...         
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~---------  244 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQT--YRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG---------  244 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTT--CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTT---------
T ss_pred             CCcccccccCcCCCCCccccChhhhcc--CCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcC---------
Confidence            2211 1111234578999999999977  6899999999999999999995 5666655543333222111         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                        ...   .....+++.+.+||.+||..||.+|||+.++++
T Consensus       245 ------------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          245 ------------------RRL---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCC---CCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                              000   112346788999999999999999999999987


No 219
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=6.7e-43  Score=386.59  Aligned_cols=249  Identities=21%  Similarity=0.422  Sum_probs=207.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+..++..||||+++...   .....+.+|+.+|+.++||||+++++++...     ..
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~  290 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PP  290 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SS
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecC-----Cc
Confidence            457999999999999999999999899999999997432   2356789999999999999999999998543     45


Q ss_pred             EEEEEeccc-ccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|||||||. ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            899999998 6999999864  4589999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...  .......+++.|+|||++..  ..|+.++|||||||+||||++ |..||.+.+.......+..            
T Consensus       371 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~------------  434 (495)
T 1opk_A          371 DTY--TAHAGAKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK------------  434 (495)
T ss_dssp             CCE--ECCTTCCCCGGGCCHHHHHH--CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT------------
T ss_pred             Cce--eecCCCcCCcceeCHhHHhc--CCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------------
Confidence            221  11233456789999999876  679999999999999999999 9999988765433322211            


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                 ..+.       .....+++.+.+||.+||+.||.+|||+.++++
T Consensus       435 -----------~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          435 -----------DYRM-------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             -----------TCCC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCC-------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                       0000       112356889999999999999999999999987


No 220
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=4.6e-43  Score=363.16  Aligned_cols=261  Identities=25%  Similarity=0.415  Sum_probs=202.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++..  ........+.+|+.+++.++||||+++++++.... .....
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~  104 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHE  104 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCce
Confidence            4689999999999999999999999999999999854  23455677899999999999999999999985321 23356


Q ss_pred             EEEEEecccc-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          192 IYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       192 l~lV~E~~~g-~L~~~i~~----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      +|+||||+.+ +|.+++..    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            8999999985 89988875    467999999999999999999999999999999999999999999999999998754


Q ss_pred             cCCCCCc------ccccccccCcccccccccccc-CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q 007428          267 FNDAPSA------IFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGT  339 (604)
Q Consensus       267 ~~~~~~~------~~~~~~~gT~~Y~APE~l~~~-~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~  339 (604)
                      .......      .......||+.|+|||++.+. ...++.++|||||||++|+|++|+.||......          + 
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----------~-  253 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK----------G-  253 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT----------T-
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc----------c-
Confidence            2111110      011234689999999998652 123688999999999999999999999431100          0 


Q ss_pred             CChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          340 PSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       340 p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                        . .+        .....   .....   ...+.+++.+.+||.+||+.||.+|||+.+++++
T Consensus       254 --~-~~--------~~~~~---~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          254 --D-SV--------ALAVQ---NQLSI---PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             --S-CH--------HHHHH---CC--C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --c-hh--------hHHhh---ccCCC---CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence              0 00        00000   00001   1124578899999999999999999999999995


No 221
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=2.2e-42  Score=393.47  Aligned_cols=250  Identities=21%  Similarity=0.314  Sum_probs=201.8

Q ss_pred             eEE-eeEeeecCceEEEEEEE--CCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          115 YQI-QEVIGKGSYGVVGSAVD--THTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       115 Y~i-~~~LG~G~fG~Vy~a~~--~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      +.+ .+.||+|+||.||+|..  ..+++.||||+++...........+.+|+.+|+.++|||||++++++..      ..
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~  443 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ES  443 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SS
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CC
Confidence            444 34899999999999954  5677899999997655555556789999999999999999999999842      24


Q ss_pred             EEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCC
Q 007428          192 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDA  270 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~  270 (604)
                      +|+|||||. ++|.+++.....+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             EEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            799999998 6899999988899999999999999999999999999999999999999999999999999998764433


Q ss_pred             CCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          271 PSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       271 ~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ......+...+|+.|+|||++.+  ..|+.++|||||||+||||++ |+.||.+.+.......+....            
T Consensus       524 ~~~~~~~~~~~t~~y~APE~~~~--~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~------------  589 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPECINY--YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE------------  589 (635)
T ss_dssp             -----------CGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC------------
T ss_pred             cccccccCCCCceeeeChhhhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC------------
Confidence            22222334567889999999976  689999999999999999998 999999877654443332210            


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                     ..   .....+++.+.+||.+||..||.+|||++++++
T Consensus       590 ---------------~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          590 ---------------RM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             ---------------CC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---------------CC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                           00   112356889999999999999999999999876


No 222
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=2.3e-43  Score=381.40  Aligned_cols=255  Identities=18%  Similarity=0.184  Sum_probs=193.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc-CChhHHHHHHHHHHHHHHcCC-CCeeEE-------------
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF-EHVSDATRILREIKLLRLLRH-PDIVEI-------------  177 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~H-pnIv~l-------------  177 (604)
                      ..|.+.++||+|+||+||+|.+..+|+.||||+++... ......+.+.+|+.+++.+.| +|+..+             
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            34899999999999999999999999999999987322 222335678899999999987 322111             


Q ss_pred             --------eeeecCCCccCcccEEEEEecccccHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccC
Q 007428          178 --------KHIMLPPSRREFKDIYVVFELMESDLHQVIKA-------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL  242 (604)
Q Consensus       178 --------~~~~~~~~~~~~~~l~lV~E~~~g~L~~~i~~-------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDL  242 (604)
                              ..++..........++++|+++.++|.+++..       ...+++..+..++.||+.||.|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence                    11111111111345799999999999988852       234778888999999999999999999999999


Q ss_pred             CCCCeeeCCCCcEEEeeccccccccCCCCCcccccccccCccccccccccc--------cCCCCCccCchhhHHHHHHHH
Q 007428          243 KPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGS--------FFSKYTPAIDIWSIGCIFAEM  314 (604)
Q Consensus       243 Kp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~~~~~k~DIWSlGvil~eL  314 (604)
                      ||+|||++.++.+||+|||+++.....      ....+| +.|+|||++..        ....|+.++|||||||++|||
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el  310 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI  310 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred             ccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence            999999999999999999998764322      345678 99999999831        114588899999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCC
Q 007428          315 LTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDR  394 (604)
Q Consensus       315 ltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~R  394 (604)
                      ++|+.||.+.+......                           .+        -.....+++.+.+||.+||..||.+|
T Consensus       311 ltg~~Pf~~~~~~~~~~---------------------------~~--------~~~~~~~~~~~~~li~~~l~~dP~~R  355 (413)
T 3dzo_A          311 WCADLPNTDDAALGGSE---------------------------WI--------FRSCKNIPQPVRALLEGFLRYPKEDR  355 (413)
T ss_dssp             HHSSCCCCTTGGGSCSG---------------------------GG--------GSSCCCCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHCCCCCCCcchhhhHH---------------------------HH--------HhhcccCCHHHHHHHHHHccCChhhC
Confidence            99999997754311100                           00        01123567899999999999999999


Q ss_pred             CCHHHHhcCcccccC
Q 007428          395 PTAEEALADPYFHGL  409 (604)
Q Consensus       395 pta~eiL~Hp~f~~~  409 (604)
                      ||+.++|+||||+.+
T Consensus       356 pt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          356 LLPLQAMETPEYEQL  370 (413)
T ss_dssp             CCHHHHTTSHHHHHH
T ss_pred             cCHHHHHhCHHHHHH
Confidence            999999999999753


No 223
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=3.2e-42  Score=376.58  Aligned_cols=243  Identities=23%  Similarity=0.401  Sum_probs=200.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|...  |..||||+++..    .....+.+|+.+|+.++||||+++++++...    ...
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~  261 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGG  261 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSC----TTSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCc----hHHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCc
Confidence            468999999999999999999874  789999999753    2346788999999999999999999997543    235


Q ss_pred             EEEEEeccc-ccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~~--l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|||||||. ++|.+++...+.  +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence            899999998 599999987653  79999999999999999999999999999999999999999999999999985422


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ..      ....+++.|+|||++.+  ..++.++|||||||+||||++ |+.||++.+..+....+..            
T Consensus       342 ~~------~~~~~~~~y~aPE~~~~--~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~------------  401 (450)
T 1k9a_A          342 TQ------DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK------------  401 (450)
T ss_dssp             -----------CCCTTTSCHHHHHS--SCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT------------
T ss_pred             cc------cCCCCCcceeCHHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc------------
Confidence            11      22367889999999977  689999999999999999998 9999987654333322211            


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                 ..+  .     .....+++.+.+||.+||..||.+|||+.++++
T Consensus       402 -----------~~~--~-----~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          402 -----------GYK--M-----DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             -----------TCC--C-----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCC--C-----CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                       000  0     112357889999999999999999999999876


No 224
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=1.7e-42  Score=379.08  Aligned_cols=247  Identities=25%  Similarity=0.406  Sum_probs=203.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+. .+..||||+++...   .....+.+|+.+|+.++||||+++++++..      ..
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~  256 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EP  256 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC------Cc
Confidence            468999999999999999999885 57789999997532   345678999999999999999999999842      34


Q ss_pred             EEEEEeccc-ccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|+|||||. |+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            799999997 6999999754  3689999999999999999999999999999999999999999999999999986532


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...  .......+|+.|+|||++..  ..++.++|||||||+||||++ |+.||.+.+..+.+..+....          
T Consensus       337 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------  402 (454)
T 1qcf_A          337 NEY--TAREGAKFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----------  402 (454)
T ss_dssp             HHH--HTTCSSSSCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC----------
T ss_pred             Cce--eccCCCcccccccCHHHhcc--CCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------
Confidence            111  11123456788999999976  689999999999999999999 999999877654443332110          


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                     ..+     ....+++.+.+||.+||..||.+|||++++++
T Consensus       403 ---------------~~~-----~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          403 ---------------RMP-----RPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             ---------------CCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCC-----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                           011     11356889999999999999999999999976


No 225
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=3.2e-42  Score=350.34  Aligned_cols=247  Identities=26%  Similarity=0.388  Sum_probs=202.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+. ++..||||+++...   .....+.+|+.+|+.++||||+++++++..      ..
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~   81 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EP   81 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SS
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC------CC
Confidence            368999999999999999999875 57789999986432   235678899999999999999999998742      24


Q ss_pred             EEEEEeccc-ccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|+||||+. ++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence            799999996 69999986543  699999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ...  .......+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+..+.+..+...           
T Consensus       162 ~~~--~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----------  226 (279)
T 1qpc_A          162 NEY--TAREGAKFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----------  226 (279)
T ss_dssp             SCE--ECCTTCCCCTTTSCHHHHHH--CEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----------
T ss_pred             ccc--ccccCCCCccCccChhhhcc--CCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----------
Confidence            221  11234467889999999876  678999999999999999999 99999887654433322110           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                  ..    .   .....+++.+.+||.+||..||.+|||+.++++
T Consensus       227 ------------~~----~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          227 ------------YR----M---VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             ------------CC----C---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------cC----C---CCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                        00    0   112356789999999999999999999999986


No 226
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=2.4e-43  Score=367.09  Aligned_cols=270  Identities=21%  Similarity=0.329  Sum_probs=203.3

Q ss_pred             CCCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          111 EASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       111 ~~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ..++|++.+.||+|+||.||+|.+ .+|..||||++...... .....+.+|+.+++.++||||+++++++...     .
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~  100 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----T  100 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCS-----S
T ss_pred             HhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEecC-----C
Confidence            356899999999999999999975 46899999998643221 1223578999999999999999999998543     4


Q ss_pred             cEEEEEeccc-ccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCCCCCeeeCCCCcEEEeeccc
Q 007428          191 DIYVVFELME-SDLHQVIKAND----DLTPEHYQFFLYQLLRGLKYIHTA---NVFHRDLKPKNILANADCKLKICDFGL  262 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~----~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKp~NILl~~~~~vKL~DFGl  262 (604)
                      ..|+|||||. ++|.+++....    .+++..+..++.||+.||.|||+.   ||+||||||+|||++.++.+||+|||+
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  180 (326)
T 3uim_A          101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL  180 (326)
T ss_dssp             CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSS
T ss_pred             ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcc
Confidence            5799999998 58999997643    499999999999999999999999   999999999999999999999999999


Q ss_pred             cccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhhc
Q 007428          263 ARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKN-----VVHQLDLMTDLL  337 (604)
Q Consensus       263 a~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~-----~~~~l~~i~~~l  337 (604)
                      +........  .......||+.|+|||++.+  ..++.++|||||||++|+|++|+.||....     .......+...+
T Consensus       181 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (326)
T 3uim_A          181 AKLMDYKDT--HVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL  256 (326)
T ss_dssp             CEECCSSSS--CEECCCCSCGGGCCHHHHHH--SEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred             ccccCcccc--cccccccCCcCccCHHHhcc--CCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence            986543222  12345679999999999876  678999999999999999999999995211     000111110000


Q ss_pred             CCCChhHHHHHhhHHHHHHhhhcccCCCCCC-CCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          338 GTPSTESISRIRNEKARRYLGSMRKKQPVPF-SHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       338 g~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                      ....                  ......... .......++.+.+||.+||+.||.+|||+.|+++|..-..+
T Consensus       257 ~~~~------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          257 KEKK------------------LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             SSCC------------------STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             hchh------------------hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            0000                  000000000 01112234678999999999999999999999998765443


No 227
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.8e-43  Score=378.33  Aligned_cols=274  Identities=22%  Similarity=0.370  Sum_probs=205.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++.... ......+.+|+.+|+.++||||+++++++....   ...
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---~~~   83 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT---TRH   83 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT---TCC
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC---CCe
Confidence            4689999999999999999999999999999999974322 233566789999999999999999999985432   246


Q ss_pred             EEEEEeccc-ccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee----CCCCcEEEeecccc
Q 007428          192 IYVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLKICDFGLA  263 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~---~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl----~~~~~vKL~DFGla  263 (604)
                      +|+|||||. ++|.+++....   .+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            899999997 68999987543   39999999999999999999999999999999999999    77888999999999


Q ss_pred             ccccCCCCCcccccccccCcccccccccccc------CCCCCccCchhhHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSF------FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNV-VHQLDLMTDL  336 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~------~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~-~~~l~~i~~~  336 (604)
                      +......    .....+||+.|+|||++.+.      ...|+.++|||||||++|||++|+.||.+... ......+..+
T Consensus       164 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~  239 (396)
T 4eut_A          164 RELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI  239 (396)
T ss_dssp             EECCCGG----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred             eEccCCC----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence            8653322    22456899999999987531      13577899999999999999999999975332 1111222222


Q ss_pred             cCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCC-------CCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          337 LGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHK-------FPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       337 lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ++..+...+..+..          ....+..|...       ...+++.+.+||.+||++||.+|||+.+++++
T Consensus       240 ~~~~p~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          240 ITGKPSGAISGVQK----------AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHSCCTTCCEEEEC----------STTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             hcCCCcccchhhee----------ccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            22111111110000          00001111111       12345678899999999999999999998653


No 228
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=4.7e-42  Score=353.84  Aligned_cols=242  Identities=26%  Similarity=0.419  Sum_probs=189.2

Q ss_pred             CCCeEEe-eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHH-HHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQ-EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLL-RLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~-~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL-~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|.+. +.||+|+||.||+|.+..+++.||||++..       ...+.+|+.++ +.+.||||+++++++.... ...
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~   87 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLY-AGR   87 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCC
Confidence            3568887 789999999999999999999999999853       23467899988 6668999999999884311 224


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC---CCcEEEeecccc
Q 007428          190 KDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLA  263 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~vKL~DFGla  263 (604)
                      ..+|+|||||. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||++
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             ceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            56899999997 59999998754  6999999999999999999999999999999999999998   788999999998


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ....                         +  ..|+.++|||||||++|+|++|+.||.+.+.......+          
T Consensus       168 ~~~~-------------------------~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~----------  210 (299)
T 3m2w_A          168 KETT-------------------------G--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----------  210 (299)
T ss_dssp             EECT-------------------------T--CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS----------
T ss_pred             cccc-------------------------c--ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH----------
Confidence            6421                         1  35677999999999999999999999775432111000          


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCcC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLAN  411 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~~  411 (604)
                                   ...............+..+++.+.+||.+||..||.+|||+.|+|+||||.+...
T Consensus       211 -------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          211 -------------KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             -------------CCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             -------------HHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence                         0000000000001112457899999999999999999999999999999987543


No 229
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=2.7e-42  Score=351.01  Aligned_cols=243  Identities=22%  Similarity=0.386  Sum_probs=194.6

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+  +|..||||+++..    ...+.+.+|+.+++.++||||+++++++...    ...
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~   89 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGG   89 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC------C
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CCc
Confidence            46899999999999999999987  4889999998642    2456788999999999999999999987543    235


Q ss_pred             EEEEEecccc-cHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~g-~L~~~i~~~~~--l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|+||||+.+ +|.+++.....  +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            8999999985 99999976543  89999999999999999999999999999999999999999999999999975432


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ..      ....+++.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+..+....+..            
T Consensus       170 ~~------~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~------------  229 (278)
T 1byg_A          170 TQ------DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK------------  229 (278)
T ss_dssp             ------------CCTTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT------------
T ss_pred             cc------cCCCccccccCHHHhCC--CCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc------------
Confidence            21      23467899999999876  689999999999999999998 9999987654333222111            


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                     ...   ......+++.+.+||.+||..||.+|||+.++++
T Consensus       230 ---------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          230 ---------------GYK---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             ---------------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------CCC---CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence                           000   1122457889999999999999999999999986


No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=1.7e-42  Score=353.85  Aligned_cols=254  Identities=22%  Similarity=0.358  Sum_probs=196.4

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECC-CCc--EEEEEEecccc-CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTH-TGE--RVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~-~g~--~vAIK~i~~~~-~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++.+.||+|+||.||+|.+.. ++.  .||||+++... ........+.+|+.+++.++||||+++++++...   
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---   93 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---   93 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence            4589999999999999999998643 333  68999986432 2234567789999999999999999999998643   


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                         .+++||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        94 ---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           94 ---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             ---SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             ---CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence               2799999998 6899988764 5799999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      ...............+|+.|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+....+..+...        
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--------  240 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE--------  240 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS--------
T ss_pred             ccccccchhhhccCCCCceeeCchhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc--------
Confidence            6443332222234568889999999876  678899999999999999999 99999887754433322110        


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                        ....   .....+++.+.+||.+||..||.+|||+.++++
T Consensus       241 ------------------~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          241 ------------------GERL---PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             ------------------CCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCCC---CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                              0000   112457889999999999999999999999998


No 231
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.6e-41  Score=351.67  Aligned_cols=243  Identities=30%  Similarity=0.431  Sum_probs=192.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++..    ......+.+|+.+|+.++||||+++++++..       .
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~   73 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACLN-------P   73 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------T
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------C
Confidence            357999999999999999999874  78999999853    2345678999999999999999999998752       2


Q ss_pred             EEEEEeccc-ccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCCccccCCCCCeeeCCCCc-EEEeecccc
Q 007428          192 IYVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHT---ANVFHRDLKPKNILANADCK-LKICDFGLA  263 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~---~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKp~NILl~~~~~-vKL~DFGla  263 (604)
                      +|+||||+. ++|.+++....   .+++..+..++.||++||.|||+   +||+||||||+|||++.++. +||+|||++
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~  153 (307)
T 2eva_A           74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA  153 (307)
T ss_dssp             TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-
T ss_pred             cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccc
Confidence            699999997 59999998655   47889999999999999999999   89999999999999998887 799999999


Q ss_pred             ccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChh
Q 007428          264 RVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTE  343 (604)
Q Consensus       264 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~  343 (604)
                      ......      .....||+.|+|||++.+  ..++.++|||||||++|||++|+.||......... .+.         
T Consensus       154 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~---------  215 (307)
T 2eva_A          154 CDIQTH------MTNNKGSAAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IMW---------  215 (307)
T ss_dssp             -----------------CCTTSSCHHHHTC--CCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HHH---------
T ss_pred             cccccc------cccCCCCCceEChhhhCC--CCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HHH---------
Confidence            754221      234579999999999977  68999999999999999999999999754321100 000         


Q ss_pred             HHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          344 SISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       344 ~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                 ..   .....    ......+++.+.+||.+||..||.+|||+++++++
T Consensus       216 -----------~~---~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          216 -----------AV---HNGTR----PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             -----------HH---HTTCC----CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------HH---hcCCC----CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                       00   00011    11234578899999999999999999999999883


No 232
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=1.6e-42  Score=367.68  Aligned_cols=246  Identities=15%  Similarity=0.188  Sum_probs=194.8

Q ss_pred             CCCeEEeeEeeecCceEEEEE-----EECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC---CCCeeEEeeeecC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSA-----VDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR---HPDIVEIKHIMLP  183 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a-----~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~---HpnIv~l~~~~~~  183 (604)
                      ..+|.+.+.||+|+||.||+|     .+..+++.||||+++..     ....+.+|+.+++.++   |+||+.+++++..
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            467999999999999999999     46778999999998642     3456778888888887   9999999999854


Q ss_pred             CCccCcccEEEEEeccc-ccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCC------
Q 007428          184 PSRREFKDIYVVFELME-SDLHQVIKA-----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA------  251 (604)
Q Consensus       184 ~~~~~~~~l~lV~E~~~-g~L~~~i~~-----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~------  251 (604)
                      .     ...|||||||. |+|.+++..     ...+++..++.|+.||+.||.|||++||+||||||+|||++.      
T Consensus       139 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~  213 (365)
T 3e7e_A          139 Q-----NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQD  213 (365)
T ss_dssp             S-----SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-
T ss_pred             C-----CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcc
Confidence            3     45899999998 699999974     457999999999999999999999999999999999999998      


Q ss_pred             -----CCcEEEeeccccccccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCCh
Q 007428          252 -----DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNV  326 (604)
Q Consensus       252 -----~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~  326 (604)
                           ++.+||+|||+|+....... ....+..+||+.|+|||++.+  ..|+.++||||||||+|||++|+.||.....
T Consensus       214 ~~~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~  290 (365)
T 3e7e_A          214 DEDDLSAGLALIDLGQSIDMKLFPK-GTIFTAKCETSGFQCVEMLSN--KPWNYQIDYFGVAATVYCMLFGTYMKVKNEG  290 (365)
T ss_dssp             -----CTTEEECCCTTCEEGGGSCT-TEEECCSSCTTSCCCHHHHTT--CCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred             ccccccCCEEEeeCchhhhhhccCC-CceeeeecCCCCCCChHHhcC--CCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence                 89999999999976432222 223456789999999999987  6799999999999999999999999964321


Q ss_pred             HHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcc
Q 007428          327 VHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPY  405 (604)
Q Consensus       327 ~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~  405 (604)
                      ..                               ....  ..+.. + ..++.+.+|+.+||..+|.+|++..+.|.+.+
T Consensus       291 ~~-------------------------------~~~~--~~~~~-~-~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l  334 (365)
T 3e7e_A          291 GE-------------------------------CKPE--GLFRR-L-PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKL  334 (365)
T ss_dssp             TE-------------------------------EEEC--SCCTT-C-SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHH
T ss_pred             Cc-------------------------------eeec--hhccc-c-CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHH
Confidence            00                               0000  00000 0 13567899999999999999976555555433


No 233
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2.1e-42  Score=359.83  Aligned_cols=266  Identities=23%  Similarity=0.343  Sum_probs=202.7

Q ss_pred             eEEeeEeeecCceEEEEEE----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          115 YQIQEVIGKGSYGVVGSAV----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       115 Y~i~~~LG~G~fG~Vy~a~----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      |++++.||+|+||.||+|.    +..+++.||||+++.. ........+.+|+.+|+.++||||+++++++....   ..
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~  108 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AA  108 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TT
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cc
Confidence            4999999999999998774    4458899999999753 23345677899999999999999999999985432   35


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+||||+. ++|.+++... .+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          109 SLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             EEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             eEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            6899999998 5899988654 5999999999999999999999999999999999999999999999999999876443


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                      ...........||+.|+|||++.+  ..++.++|||||||++|+|++|..||......     .....+...... .   
T Consensus       188 ~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~-~---  256 (318)
T 3lxp_A          188 HEYYRVREDGDSPVFWYAPECLKE--YKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-----FLELIGIAQGQM-T---  256 (318)
T ss_dssp             CSEEEC---CCCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-----HHHHHCSCCHHH-H---
T ss_pred             ccccccccCCCCCceeeChHHhcC--CCCCcHHHHHHHHHHHHHHHhCCCcccccchh-----hhhhhcccccch-h---
Confidence            322222344578999999999877  67889999999999999999999999653211     111111111110 0   


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .......+   ......   .....+++.+.+||.+||+.||.+|||+.|+++
T Consensus       257 ~~~~~~~~---~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          257 VLRLTELL---ERGERL---PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHH---HTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHH---hcccCC---CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            00111111   111111   122457889999999999999999999999986


No 234
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=2.7e-42  Score=355.79  Aligned_cols=265  Identities=23%  Similarity=0.312  Sum_probs=201.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc--CChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF--EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~--~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ...|...+.||+|+||.||+|.+  ++..||||++....  ........+.+|+.+|+.++||||+++++++...     
T Consensus        30 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----  102 (307)
T 2nru_A           30 RPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG-----  102 (307)
T ss_dssp             SBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----
T ss_pred             ccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecC-----
Confidence            34466678999999999999975  68899999986432  2234467789999999999999999999998543     


Q ss_pred             ccEEEEEeccc-ccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          190 KDIYVVFELME-SDLHQVIKA---NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~---~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ..+|+||||+. ++|.+++..   ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~  182 (307)
T 2nru_A          103 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA  182 (307)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccc
Confidence            45899999996 689998874   34699999999999999999999999999999999999999999999999999986


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ....... .......||+.|+|||++.+   .++.++|||||||++|+|++|.+||.+......+..+...+.....   
T Consensus       183 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---  255 (307)
T 2nru_A          183 SEKFAQT-VMTSRIVGTTAYMAPEALRG---EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEK---  255 (307)
T ss_dssp             CCSCSSC-EECSSCCSCGGGCCHHHHTT---EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSC---
T ss_pred             ccccccc-ccccccCCCcCcCChHHhcC---CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhh---
Confidence            5432221 12234679999999999865   5788999999999999999999999875532221111110000000   


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                            ....++.   .    .........+..+.+||.+||..||.+|||+.+++++
T Consensus       256 ------~~~~~~~---~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          256 ------TIEDYID---K----KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             ------CHHHHSC---S----SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ------hhhhhcc---c----cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                  0001110   0    0111112234668899999999999999999999874


No 235
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.6e-42  Score=368.53  Aligned_cols=254  Identities=22%  Similarity=0.362  Sum_probs=193.9

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCC---CcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHT---GERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~---g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .+|.+.+.||+|+||.||+|....+   +..||||.++.. ........+.+|+.+|+.++||||+++++++...    .
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~  163 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----E  163 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC----S
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----C
Confidence            4689999999999999999987543   346899998643 3335567889999999999999999999987533    2


Q ss_pred             ccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          190 KDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                      ...|+|||||. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccc
Confidence            35799999998 5999999765 358899999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCC-cccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          268 NDAPS-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       268 ~~~~~-~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ..... ........+|+.|+|||++.+  ..++.++|||||||++|||++ |.+||.+.+..+....+..          
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~----------  311 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ----------  311 (373)
T ss_dssp             --------------CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT----------
T ss_pred             ccccccccccCCCCCcccccChHHhcC--CCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc----------
Confidence            32211 111234567889999999877  689999999999999999999 7889987654332222111          


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                                      ...+    .....+++.+.+||.+||..||.+|||+.|++++
T Consensus       312 ----------------~~~~----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          312 ----------------GRRL----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             ----------------TCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------------CCCC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                            0000    0113467889999999999999999999999874


No 236
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.6e-42  Score=362.01  Aligned_cols=273  Identities=23%  Similarity=0.277  Sum_probs=193.9

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHH--HHHcCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKL--LRLLRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~i--L~~l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++++.||+|+||.||+|.+  +++.||||++...     ....+..|..+  +..++||||+++++.+........
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence            46899999999999999999976  6899999998632     22333444444  456899999999976543333444


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CCccccCCCCCeeeCCCCcEEEee
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA---------NVFHRDLKPKNILANADCKLKICD  259 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~---------gIiHrDLKp~NILl~~~~~vKL~D  259 (604)
                      ..+|+|||||+ ++|.+++... .+++..+..++.||+.||.|||+.         ||+||||||+|||++.++.+||+|
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D  163 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD  163 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred             ceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence            56899999996 6999999765 468999999999999999999999         999999999999999999999999


Q ss_pred             ccccccccCCCC-----CcccccccccCccccccccccccC-----CCCCccCchhhHHHHHHHHHhCCCC-CCCCChHH
Q 007428          260 FGLARVSFNDAP-----SAIFWTDYVATRWYRAPELCGSFF-----SKYTPAIDIWSIGCIFAEMLTGKPL-FPGKNVVH  328 (604)
Q Consensus       260 FGla~~~~~~~~-----~~~~~~~~~gT~~Y~APE~l~~~~-----~~~~~k~DIWSlGvil~eLltG~~P-F~~~~~~~  328 (604)
                      ||+++.......     ........+||+.|+|||++.+..     ..++.++|||||||++|||++|..| |++.....
T Consensus       164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~  243 (336)
T 3g2f_A          164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE  243 (336)
T ss_dssp             CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred             ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence            999986543211     111223567999999999986511     2456789999999999999999655 44433211


Q ss_pred             HHHH-HHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCC---CCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          329 QLDL-MTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFP---NADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       329 ~l~~-i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .... .......+..+.+..        .+...  .....+...++   .+++.+.+||.+||..||.+|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          244 YQMAFQTEVGNHPTFEDMQV--------LVSRE--KQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             CCCTTHHHHCSSCCHHHHHH--------HHTTS--CCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhhhcccCCCchHHHHHh--------hhccc--ccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            1111 111122222222111        11111  11111222222   24567999999999999999999999954


No 237
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=6.5e-42  Score=374.35  Aligned_cols=247  Identities=26%  Similarity=0.395  Sum_probs=198.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+.. +..||||+++...   .....+.+|+.+|+.++||||+++++++..      ..
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~  252 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EP  252 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SS
T ss_pred             hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cc
Confidence            4679999999999999999999864 4679999997532   234678999999999999999999999843      34


Q ss_pred             EEEEEeccc-ccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|+|||||. ++|.+++..  ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             eEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            799999997 599999964  35699999999999999999999999999999999999999999999999999986543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ....  ......+|..|+|||++..  ..++.++|||||||+||||++ |+.||.+....+.+..+...           
T Consensus       333 ~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----------  397 (452)
T 1fmk_A          333 NEYT--ARQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----------  397 (452)
T ss_dssp             ------------CCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----------
T ss_pred             Ccee--cccCCcccccccCHhHHhc--CCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----------
Confidence            2211  1233457889999999876  689999999999999999999 99999987754444332211           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                  .  ..+     ..+.+++.+.+||.+||..||.+|||++++++
T Consensus       398 ------------~--~~~-----~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          398 ------------Y--RMP-----CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             ------------C--CCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------C--CCC-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                        0  011     11356888999999999999999999999987


No 238
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=7.8e-42  Score=376.74  Aligned_cols=257  Identities=20%  Similarity=0.276  Sum_probs=201.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC-eeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD-IVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn-Iv~l~~~~~~~~~~~~~  190 (604)
                      .++|+++++||+|+||.||+|.+..+++.||||++......    ..+.+|+.+++.|.|++ |..+..++     ....
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~-----~~~~   76 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFG-----VEGD   76 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEE-----EETT
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEE-----eeCC
Confidence            46899999999999999999999999999999988643222    34678999999998754 44444443     2345


Q ss_pred             cEEEEEecccccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeee---CCCCcEEEeeccccccc
Q 007428          191 DIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVS  266 (604)
Q Consensus       191 ~l~lV~E~~~g~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl---~~~~~vKL~DFGla~~~  266 (604)
                      ..|||||||+++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+||||   +.++.+||+|||+++..
T Consensus        77 ~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           77 YNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            6899999999999999975 5679999999999999999999999999999999999999   58899999999999876


Q ss_pred             cCCCCCc----ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCh
Q 007428          267 FNDAPSA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPST  342 (604)
Q Consensus       267 ~~~~~~~----~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~  342 (604)
                      .......    ......+||+.|+|||++.+  ..++.++||||||||||||++|+.||.+.........+..       
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~-------  227 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLG--IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEK-------  227 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT--CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHH-------
T ss_pred             cCCccccccccccccccCCCccccCHHHhcC--CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHH-------
Confidence            4433211    11235689999999999987  6899999999999999999999999987554222222111       


Q ss_pred             hHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          343 ESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       343 ~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                           +........+..           ....+++.+.+||.+||..||.+||++.+|++
T Consensus       228 -----i~~~~~~~~~~~-----------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          228 -----ISEKKVATSIEA-----------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             -----HHHHHHHSCHHH-----------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -----HhhccccccHHH-----------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                 111111111111           11345788999999999999999999998876


No 239
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.3e-41  Score=383.72  Aligned_cols=252  Identities=22%  Similarity=0.339  Sum_probs=198.7

Q ss_pred             CCCeEEee-EeeecCceEEEEEEEC--CCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQE-VIGKGSYGVVGSAVDT--HTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~-~LG~G~fG~Vy~a~~~--~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..+|.+.+ .||+|+||.||+|...  .++..||||+++... .......+.+|+.+|+.++|||||++++++..     
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-----  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-----  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-----
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-----
Confidence            34566666 8999999999999775  356789999997542 23456778999999999999999999999843     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                       ..+|||||||. ++|.+++... ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       408 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          408 -EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             -SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence             24899999998 5899988654 46999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ..............+|+.|+|||++.+  ..|+.++|||||||+||||++ |+.||.+.+..+.+..+...         
T Consensus       487 ~~~~~~~~~~~~~~~~~~y~APE~~~~--~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~---------  555 (613)
T 2ozo_A          487 GADDSYYTARSAGKWPLKWYAPECINF--RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG---------  555 (613)
T ss_dssp             C--------------CCTTSCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTT---------
T ss_pred             cCCCceeeeccCCCCccceeCHhhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC---------
Confidence            433221111223356789999999976  689999999999999999998 99999987755443333210         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                        ...   ...+.+++.+.+||.+||..||.+||++.++++
T Consensus       556 ------------------~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          556 ------------------KRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             ------------------CCC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                              000   112357889999999999999999999999754


No 240
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2e-41  Score=353.46  Aligned_cols=270  Identities=22%  Similarity=0.365  Sum_probs=207.0

Q ss_pred             CCCeEEeeEeeecCceEEEEEE----ECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAV----DTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR  187 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~----~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~  187 (604)
                      ..+|++++.||+|+||.||+|.    +..+|+.||||++...  .......+.+|+.+|+.++||||+++++++....  
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--  115 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG--  115 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC--
Confidence            4579999999999999999998    4678999999999752  3345677899999999999999999999986532  


Q ss_pred             CcccEEEEEeccc-ccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          188 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       188 ~~~~l~lV~E~~~-g~L~~~i~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                       ...+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       116 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          116 -RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             ---CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             -CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence             235899999997 5999999875 4699999999999999999999999999999999999999999999999999987


Q ss_pred             ccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          266 SFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       266 ~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ...............+|..|+|||++.+  ..++.++|||||||++|+|++|..||....     ....+..+.......
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~tg~~~~~~~~-----~~~~~~~~~~~~~~~  267 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYIEKSKSPP-----AEFMRMIGNDKQGQM  267 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHH--CEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-----HHHHHHHCTTCCTHH
T ss_pred             ccccccccccccCCCCceeEECchhhcC--CCCCchhhHHHHHHHHHHHHhcCCCCCCCH-----HHHHHhhccccchhh
Confidence            6443322111233467888999999877  678899999999999999999999985421     111122222221111


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      ..   ......+   ......+   ....+++.+.+||.+||..||.+|||+.|+++
T Consensus       268 ~~---~~~~~~~---~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          268 IV---FHLIELL---KNNGRLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HH---HHHHHHH---HTTCCCC---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hH---HHHHHHh---hcCCCCC---CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            00   0111111   1111111   12457899999999999999999999999986


No 241
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7e-42  Score=356.67  Aligned_cols=262  Identities=26%  Similarity=0.338  Sum_probs=191.1

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHc--CCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLL--RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l--~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++..     .......+|..++..+  +||||+++++++.... ...
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~  107 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFT-----TEEASWFRETEIYQTVLMRHENILGFIAADIKGT-GSW  107 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEG-----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGG
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEec-----cccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCC
Confidence            357999999999999999999875  89999999853     2234455666666554  8999999999986542 223


Q ss_pred             ccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CCccccCCCCCeeeCCCCcEEEeec
Q 007428          190 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA--------NVFHRDLKPKNILANADCKLKICDF  260 (604)
Q Consensus       190 ~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~--------gIiHrDLKp~NILl~~~~~vKL~DF  260 (604)
                      ..+|+|||||. ++|.+++... .+++..+..++.||+.||.|||+.        ||+||||||+|||++.++.+||+||
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  186 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL  186 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred             CceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence            56899999998 5999999654 699999999999999999999999        9999999999999999999999999


Q ss_pred             cccccccCCCCC-cccccccccCccccccccccccCCCCCcc------CchhhHHHHHHHHHhC----------CCCCCC
Q 007428          261 GLARVSFNDAPS-AIFWTDYVATRWYRAPELCGSFFSKYTPA------IDIWSIGCIFAEMLTG----------KPLFPG  323 (604)
Q Consensus       261 Gla~~~~~~~~~-~~~~~~~~gT~~Y~APE~l~~~~~~~~~k------~DIWSlGvil~eLltG----------~~PF~~  323 (604)
                      |++......... .......+||+.|+|||++.+  ..++.+      +|||||||++|||++|          ..||..
T Consensus       187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE--SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             TTCEECC---------CCSSCSCGGGCCHHHHTT--CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             CCceeeccccccccCCCCCCccCcceeChhhccc--ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence            999765333221 111234589999999999876  444444      8999999999999999          666654


Q ss_pred             CChHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          324 KNVVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       324 ~~~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ....           .+....+        .............+.......+++.+.+||.+||+.||.+|||+.++++|
T Consensus       265 ~~~~-----------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          265 LVPS-----------DPSYEDM--------REIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TSCS-----------SCCHHHH--------HHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hcCC-----------CCchhhh--------HHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            2210           0010000        00000000001111000011345679999999999999999999999985


No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=6e-43  Score=396.29  Aligned_cols=283  Identities=26%  Similarity=0.354  Sum_probs=210.1

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCC-ccCccc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-RREFKD  191 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~-~~~~~~  191 (604)
                      ++|++.+.||+|+||.||+|.+..+|..||||+++.. ........+.+|+.+|+.++||||+++++++.... ......
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            6899999999999999999999999999999998653 23445677899999999999999999999875421 123456


Q ss_pred             EEEEEeccc-ccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCc---EEEeeccccc
Q 007428          192 IYVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGLAR  264 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~---~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~---vKL~DFGla~  264 (604)
                      .|+|||||. ++|.+++....   .+++..++.++.||+.||.|||+.||+||||||+|||++.++.   +||+|||++.
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence            899999996 69999998654   6999999999999999999999999999999999999997765   9999999998


Q ss_pred             cccCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhH
Q 007428          265 VSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTES  344 (604)
Q Consensus       265 ~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~  344 (604)
                      .......    .....||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.........   .........
T Consensus       173 ~~~~~~~----~~~~~gt~~Y~APE~l~~--~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~---~i~~~~~~~  243 (676)
T 3qa8_A          173 ELDQGEL----CTEFVGTLQYLAPELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHG---KVREKSNEH  243 (676)
T ss_dssp             BTTSCCC----CCCCCSCCTTCSSCSSCC--SCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSST---TCC------
T ss_pred             ccccccc----cccccCCcccCChHHhcc--CCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhh---hhhcccchh
Confidence            6543322    245689999999999977  7899999999999999999999999987543221100   000000000


Q ss_pred             HHHHhhHHHHHHhhhcccCCCCC-CCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccCc
Q 007428          345 ISRIRNEKARRYLGSMRKKQPVP-FSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGLA  410 (604)
Q Consensus       345 i~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~~  410 (604)
                      +....     ............+ .....+.+++.+.+||.+||.+||.+|||+.++|+||||+.+.
T Consensus       244 ~~~~~-----~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          244 IVVYD-----DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             CCSCC-----CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             hhhhh-----hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence            00000     0000000000001 1122234678899999999999999999999999999998654


No 243
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.9e-41  Score=378.49  Aligned_cols=247  Identities=26%  Similarity=0.393  Sum_probs=202.8

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      ..+|++.+.||+|+||.||+|.+.. +..||||+++...   .....+.+|+.+|+.|+||||+++++++..      ..
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~  335 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EP  335 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------SS
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------cc
Confidence            4579999999999999999999864 4679999997532   234678999999999999999999999843      34


Q ss_pred             EEEEEeccc-ccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          192 IYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      +|||||||. ++|.+++..  ...+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  415 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred             ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence            799999998 599999964  35699999999999999999999999999999999999999999999999999976432


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHHHH
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESISR  347 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~  347 (604)
                      ..  ........++..|+|||++..  ..++.++|||||||+||||++ |+.||.+....+.+..+...           
T Consensus       416 ~~--~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-----------  480 (535)
T 2h8h_A          416 NE--YTARQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----------  480 (535)
T ss_dssp             HH--HHTTCSTTSCGGGSCHHHHHH--CCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-----------
T ss_pred             Cc--eecccCCcCcccccCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----------
Confidence            11  011123457789999999876  689999999999999999999 99999987754444333211           


Q ss_pred             HhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          348 IRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                  .  ..+     ....+++.+.+||.+||..||.+|||++++++
T Consensus       481 ------------~--~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          481 ------------Y--RMP-----CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             ------------C--CCC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------C--CCC-----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                        0  001     11356788999999999999999999999987


No 244
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=1.3e-41  Score=352.30  Aligned_cols=258  Identities=22%  Similarity=0.283  Sum_probs=199.5

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCccc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~~  191 (604)
                      .++|++.+.||+|+||.||+|.+..   .||+|+++...........+.+|+.+++.++||||+++++++...     ..
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~  103 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-----PH  103 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS-----SC
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----Cc
Confidence            5789999999999999999998753   499999875433333345567899999999999999999998543     45


Q ss_pred             EEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          192 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       192 l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      +|+||||+. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++ ++.+||+|||++......
T Consensus       104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC-----
T ss_pred             eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccc
Confidence            899999997 68999987654 699999999999999999999999999999999999998 789999999998754221


Q ss_pred             CC--CcccccccccCcccccccccccc-------CCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q 007428          270 AP--SAIFWTDYVATRWYRAPELCGSF-------FSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTP  340 (604)
Q Consensus       270 ~~--~~~~~~~~~gT~~Y~APE~l~~~-------~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p  340 (604)
                      ..  .........||+.|+|||++.+.       ...++.++|||||||++|+|++|+.||.+.........+...    
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----  258 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG----  258 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT----
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC----
Confidence            11  11112345699999999998642       145788999999999999999999999877654333222110    


Q ss_pred             ChhHHHHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccccC
Q 007428          341 STESISRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFHGL  409 (604)
Q Consensus       341 ~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~~~  409 (604)
                                            ..+.   .....+++.+.+||.+||..||.+|||+.++++  .|..+
T Consensus       259 ----------------------~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~--~l~~l  300 (319)
T 2y4i_B          259 ----------------------MKPN---LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD--MLEKL  300 (319)
T ss_dssp             ----------------------CCCC---CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH--HHTTC
T ss_pred             ----------------------CCCC---CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH--HHHHH
Confidence                                  0010   111246778999999999999999999999998  45444


No 245
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=5.6e-43  Score=366.68  Aligned_cols=253  Identities=19%  Similarity=0.168  Sum_probs=189.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccC------ChhHHHHHHHHHHHHHHcC---------CCCeeE
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE------HVSDATRILREIKLLRLLR---------HPDIVE  176 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~------~~~~~~~~~~Ei~iL~~l~---------HpnIv~  176 (604)
                      .++|++++.||+|+||.||+|++  +|+.||||+++....      .......+.+|+.+|+.++         ||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            45799999999999999999988  789999999975321      2233467889999999886         777777


Q ss_pred             EeeeecCCC-------------------------ccCcccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 007428          177 IKHIMLPPS-------------------------RREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLK  230 (604)
Q Consensus       177 l~~~~~~~~-------------------------~~~~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~  230 (604)
                      +.+++....                         ......+|||||||. |++.+.+.. ..+++..++.|+.||+.||.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence            766543110                         012467999999997 445555533 57899999999999999999


Q ss_pred             HHH-HCCCccccCCCCCeeeCCCC--------------------cEEEeeccccccccCCCCCcccccccccCccccccc
Q 007428          231 YIH-TANVFHRDLKPKNILANADC--------------------KLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPE  289 (604)
Q Consensus       231 yLH-~~gIiHrDLKp~NILl~~~~--------------------~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE  289 (604)
                      ||| ++||+||||||+|||++.++                    .+||+|||+|+....        ...+||+.|+|||
T Consensus       176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~~~~gt~~y~aPE  247 (336)
T 2vuw_A          176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------GIVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------TEEECCCCTTCSG
T ss_pred             HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------CcEEEeecccChh
Confidence            999 99999999999999999887                    899999999986532        2348999999999


Q ss_pred             cccccCCCCCccCchhhHHHH-HHHHHhCCCCCCCCChHH-HHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCC
Q 007428          290 LCGSFFSKYTPAIDIWSIGCI-FAEMLTGKPLFPGKNVVH-QLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVP  367 (604)
Q Consensus       290 ~l~~~~~~~~~k~DIWSlGvi-l~eLltG~~PF~~~~~~~-~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~  367 (604)
                      ++.+  . .+.++||||||++ .+++++|..||.+..... ....+                       +.... .....
T Consensus       248 ~~~g--~-~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~-----------------------~~~~~-~~~~~  300 (336)
T 2vuw_A          248 LFTG--D-GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKM-----------------------LKQMT-FKTKC  300 (336)
T ss_dssp             GGCC--C-SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHH-----------------------HHTCC-CSSCC
T ss_pred             hhcC--C-CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhh-----------------------hhhhc-cCccc
Confidence            9976  2 3889999998777 788889999984321100 00111                       10000 00011


Q ss_pred             CCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHh-cCcccc
Q 007428          368 FSHKFPNADPLALHLLERLLAFDPKDRPTAEEAL-ADPYFH  407 (604)
Q Consensus       368 ~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL-~Hp~f~  407 (604)
                      ....++.+++.+.+||.+||++|     |++|+| +||||+
T Consensus       301 ~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          301 NTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             chhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            11112346788999999999987     999999 999995


No 246
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=3.9e-41  Score=352.08  Aligned_cols=262  Identities=24%  Similarity=0.304  Sum_probs=197.2

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHH--cCCCCeeEEeeeecCCCccCc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRL--LRHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~~~~~~~~~~~~  189 (604)
                      .++|++.+.||+|+||.||+|.+  +|+.||||++..     .....+.+|+.+++.  ++||||+++++++.... ...
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~~  112 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTW  112 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECG-----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SSC
T ss_pred             cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCc-----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Ccc
Confidence            35799999999999999999987  589999999863     234567889999988  78999999999986543 222


Q ss_pred             ccEEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCccccCCCCCeeeCCCCcEEEeec
Q 007428          190 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH--------TANVFHRDLKPKNILANADCKLKICDF  260 (604)
Q Consensus       190 ~~l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH--------~~gIiHrDLKp~NILl~~~~~vKL~DF  260 (604)
                      ..+|+||||+.+ +|.+++.. ..+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||+||
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df  191 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  191 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred             ceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence            368999999985 99999975 46999999999999999999999        899999999999999999999999999


Q ss_pred             cccccccCCCCCc-ccccccccCccccccccccccCC----CCCccCchhhHHHHHHHHHhC----------CCCCCCCC
Q 007428          261 GLARVSFNDAPSA-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEMLTG----------KPLFPGKN  325 (604)
Q Consensus       261 Gla~~~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~----~~~~k~DIWSlGvil~eLltG----------~~PF~~~~  325 (604)
                      |++.......... .......||+.|+|||++.+...    .++.++|||||||++|||++|          ..||....
T Consensus       192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            9997654333211 11244589999999999876211    233689999999999999999          67886542


Q ss_pred             hHHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCC--CCCCHHHHHHHHhhcCCCCCCCCCHHHHhcC
Q 007428          326 VVHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKF--PNADPLALHLLERLLAFDPKDRPTAEEALAD  403 (604)
Q Consensus       326 ~~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~H  403 (604)
                      ..           .+....+        ...+..  ......+...+  ..+.+.+.+||.+||..||.+|||+.++++|
T Consensus       272 ~~-----------~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          272 PS-----------DPSVEEM--------RKVVCE--QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CS-----------SCCHHHH--------HHHHTT--SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cC-----------cccHHHH--------HHHHHH--HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            10           0000000        000000  00000011111  1234578999999999999999999999985


No 247
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=3.5e-40  Score=376.60  Aligned_cols=250  Identities=25%  Similarity=0.418  Sum_probs=202.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCC---CcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHT---GERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~---g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      ..+|++.+.||+|+||.||+|.+..+   +..||||+++.. ........+.+|+.+|+.++||||+++++++..     
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-----  462 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-----  462 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence            46799999999999999999998654   467999988642 233445678999999999999999999999832     


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                       ..+|+|||||. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       463 -~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          463 -NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             -CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence             24799999998 69999997654 6999999999999999999999999999999999999999999999999999865


Q ss_pred             cCCCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCChhHH
Q 007428          267 FNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT-GKPLFPGKNVVHQLDLMTDLLGTPSTESI  345 (604)
Q Consensus       267 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt-G~~PF~~~~~~~~l~~i~~~lg~p~~~~i  345 (604)
                      ......  ......+|+.|+|||++.+  ..++.++|||||||++|||++ |.+||.+.+..+.+..+...         
T Consensus       542 ~~~~~~--~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~---------  608 (656)
T 2j0j_A          542 EDSTYY--KASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG---------  608 (656)
T ss_dssp             CC------------CCGGGCCHHHHHH--CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT---------
T ss_pred             CCCcce--eccCCCCCcceeCHHHhcC--CCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC---------
Confidence            332211  1233467889999999976  689999999999999999997 99999987765444333211         


Q ss_pred             HHHhhHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          346 SRIRNEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                        ...   ...+.+++.+.+||.+||..||.+|||+.++++
T Consensus       609 ------------------~~~---~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          609 ------------------ERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             ------------------CCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------------CCC---CCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                              000   112457889999999999999999999999986


No 248
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=6.1e-43  Score=358.87  Aligned_cols=260  Identities=24%  Similarity=0.304  Sum_probs=178.6

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHH--cCCCCeeEEeeeecCCCccCcc
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRL--LRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~--l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      ++|++.+.||+|+||.||+|.+  +|+.||||+++.     .....+.+|..++..  ++||||+++++++.... ....
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~-----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~   74 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSS-----REERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWT   74 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC------TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSE
T ss_pred             ceeeehhhccCCCCeEEEEEEE--cCcceEEEEecc-----cchhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccc
Confidence            5799999999999999999965  589999999863     234556788888877  78999999999985433 1223


Q ss_pred             cEEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCCccccCCCCCeeeCCCCcEEEeecc
Q 007428          191 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH--------TANVFHRDLKPKNILANADCKLKICDFG  261 (604)
Q Consensus       191 ~l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH--------~~gIiHrDLKp~NILl~~~~~vKL~DFG  261 (604)
                      .+|+|||||.+ +|.+++.. ..+++..+..++.|++.||.|||        +.||+||||||+|||++.++.+||+|||
T Consensus        75 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg  153 (303)
T 3gxj_A           75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  153 (303)
T ss_dssp             EEEEEEECCTTCCHHHHHHH-CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred             eeEEEEeccCCCCHHHHHhc-cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecC
Confidence            68999999985 99999865 46889999999999999999999        9999999999999999999999999999


Q ss_pred             ccccccCCCCCc-ccccccccCccccccccccccCC----CCCccCchhhHHHHHHHHHhC----------CCCCCCCCh
Q 007428          262 LARVSFNDAPSA-IFWTDYVATRWYRAPELCGSFFS----KYTPAIDIWSIGCIFAEMLTG----------KPLFPGKNV  326 (604)
Q Consensus       262 la~~~~~~~~~~-~~~~~~~gT~~Y~APE~l~~~~~----~~~~k~DIWSlGvil~eLltG----------~~PF~~~~~  326 (604)
                      ++.......... ......+||+.|+|||++.+...    .++.++|||||||++|||++|          ..||.....
T Consensus       154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~  233 (303)
T 3gxj_A          154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred             cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence            997654332211 11234579999999999876211    334689999999999999999          556543221


Q ss_pred             HHHHHHHHhhcCCCChhHHHHHhhHHHHHHhhhcccCCCCCCCCCC--CCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          327 VHQLDLMTDLLGTPSTESISRIRNEKARRYLGSMRKKQPVPFSHKF--PNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       327 ~~~l~~i~~~lg~p~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                      .           .+....+        ...+.  .......+...+  ..+++.+.+||.+||..||.+|||++++++
T Consensus       234 ~-----------~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  290 (303)
T 3gxj_A          234 S-----------DPSVEEM--------RKVVC--EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             ------------CCCCC-C--------HHHHT--TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             C-----------CccHHHH--------HHHHH--HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence            0           0000000        00000  000000111111  122346899999999999999999999987


No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.1e-39  Score=331.97  Aligned_cols=227  Identities=17%  Similarity=0.104  Sum_probs=182.7

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCC-hhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~-~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+++.++||||+++++++..     ..
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~  104 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----RA  104 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TT
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----CC
Confidence            46899999999999999999999999999999999754332 3445778999999999999999999999843     35


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|+|||||+ ++|.+++...  ..+.++..|+.||+.||.|||++||+||||||+|||++.+|.+||+++|        
T Consensus       105 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~--------  174 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA--------  174 (286)
T ss_dssp             EEEEEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred             cEEEEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence            6899999997 5899988543  4667788999999999999999999999999999999999999998554        


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                                     |++         .++.++|||||||++|||++|+.||.+.+....+.....              
T Consensus       175 ---------------~~~---------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~--------------  216 (286)
T 3uqc_A          175 ---------------TMP---------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER--------------  216 (286)
T ss_dssp             ---------------CCT---------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB--------------
T ss_pred             ---------------ccC---------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH--------------
Confidence                           332         367899999999999999999999988653211100000              


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALA  402 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~  402 (604)
                                .....+.+.....+.+++.+.+||.+||+.||.+| |+.|+++
T Consensus       217 ----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          217 ----------DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             ----------CTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             ----------HhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence                      00001111112235678999999999999999999 9999988


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.6e-40  Score=381.21  Aligned_cols=245  Identities=25%  Similarity=0.365  Sum_probs=197.3

Q ss_pred             CCCeEEeeEeeecCceEEEEEEECC-CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccCcc
Q 007428          112 ASRYQIQEVIGKGSYGVVGSAVDTH-TGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       112 ~~~Y~i~~~LG~G~fG~Vy~a~~~~-~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~~~  190 (604)
                      .++|++.+.||+|+||.||+|.+.. +|+.||||++... ........+.+|+.+|+.++||||+++++++.........
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            4689999999999999999999976 7999999998642 2234456788999999999999999999998654332223


Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccCC
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFND  269 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~  269 (604)
                      .+|||||||+ ++|.+++..  .+++..+..|+.||+.||.|||++||+||||||+|||++.+ .+||+|||+++.....
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             EEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred             eeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence            3799999998 578777654  79999999999999999999999999999999999999875 9999999999865322


Q ss_pred             CCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCChhHHHHHh
Q 007428          270 APSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPSTESISRIR  349 (604)
Q Consensus       270 ~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF~~~~~~~~l~~i~~~lg~p~~~~i~~~~  349 (604)
                             ...+||+.|+|||++.+   .++.++||||||||||+|++|.+||.+....          +.+....     
T Consensus       235 -------~~~~gt~~y~aPE~~~~---~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------~~~~~~~-----  289 (681)
T 2pzi_A          235 -------GYLYGTPGFQAPEIVRT---GPTVATDIYTVGRTLAALTLDLPTRNGRYVD----------GLPEDDP-----  289 (681)
T ss_dssp             -------SCCCCCTTTSCTTHHHH---CSCHHHHHHHHHHHHHHHHSCCCEETTEECS----------SCCTTCH-----
T ss_pred             -------CccCCCccccCHHHHcC---CCCCceehhhhHHHHHHHHhCCCCCcccccc----------ccccccc-----
Confidence                   34579999999999865   3588999999999999999999998753210          0000000     


Q ss_pred             hHHHHHHhhhcccCCCCCCCCCCCCCCHHHHHHHHhhcCCCCCCCCCHHHHhcCcccc
Q 007428          350 NEKARRYLGSMRKKQPVPFSHKFPNADPLALHLLERLLAFDPKDRPTAEEALADPYFH  407 (604)
Q Consensus       350 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~~L~~DP~~Rpta~eiL~Hp~f~  407 (604)
                                            ....++.+.+||.+||..||.+||++.+++.|+|+.
T Consensus       290 ----------------------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          290 ----------------------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             ----------------------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ----------------------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence                                  001246789999999999999999999999999875


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.98  E-value=3.1e-34  Score=322.18  Aligned_cols=188  Identities=18%  Similarity=0.124  Sum_probs=134.2

Q ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeccccC--------ChhHHHHHHHHHHHHHHc-CCCCeeEEeeeecCCCccCc
Q 007428          119 EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE--------HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       119 ~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~--------~~~~~~~~~~Ei~iL~~l-~HpnIv~l~~~~~~~~~~~~  189 (604)
                      ..++.|++|.+..++....|+.||+|++.+...        .....+.+.+|+.+|+++ .|+||+++++++     ++.
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----ed~  314 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-----ENA  314 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-----ECS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----EEC
Confidence            456788888888888888999999999864321        122345689999999999 699999999998     555


Q ss_pred             ccEEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeeccccccccC
Q 007428          190 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFN  268 (604)
Q Consensus       190 ~~l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~  268 (604)
                      ..+|||||||+| +|.++|...+++++.   .|+.||+.||.|||++|||||||||+|||++.+|++||+|||+|+....
T Consensus       315 ~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          315 QSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             SEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             CEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            679999999995 899999998888765   4889999999999999999999999999999999999999999986543


Q ss_pred             CCCCcccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCC
Q 007428          269 DAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPL  320 (604)
Q Consensus       269 ~~~~~~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~P  320 (604)
                      ...   ..+..+||+.|||||++.+   .+..++|+||+|+++++|++|..+
T Consensus       392 ~~~---~~~t~vGTp~YmAPE~l~g---~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          392 DCS---WPTNLVQSFFVFVNELFAE---NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             --C---CSHHHHHHHHHHHHHHC--------------------CCCCTTHHH
T ss_pred             CCc---cccCceechhhccHHHhCC---CCCCcccccccccchhhhccccch
Confidence            322   2355789999999999875   567789999999999988766533


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94  E-value=2.1e-28  Score=273.23  Aligned_cols=190  Identities=21%  Similarity=0.256  Sum_probs=142.1

Q ss_pred             eEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh------hHHHHHHHHHHHHHHcCCCCeeEEeeeecCCCccC
Q 007428          115 YQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV------SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE  188 (604)
Q Consensus       115 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~------~~~~~~~~Ei~iL~~l~HpnIv~l~~~~~~~~~~~  188 (604)
                      +...+.||+|+||.||+|  ...+..+|+|++.......      ...+++.+|+.+|+.++||||+.+..++...    
T Consensus       338 ~~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~----  411 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL----  411 (540)
T ss_dssp             ----------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET----
T ss_pred             CCCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC----
Confidence            345679999999999999  4568899999864322111      1234578999999999999999443333221    


Q ss_pred             cccEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcEEEeecccccccc
Q 007428          189 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSF  267 (604)
Q Consensus       189 ~~~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~  267 (604)
                       ...|||||||+ ++|.+++..        +..++.||++||.|||++||+||||||+|||++.  .+||+|||+|+...
T Consensus       412 -~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          412 -DNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             -TTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             -CccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence             23599999997 799998865        5689999999999999999999999999999998  99999999998753


Q ss_pred             CCCCCc----ccccccccCccccccccccccCCCCCccCchhhHHHHHHHHHhCCCCC
Q 007428          268 NDAPSA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLF  321 (604)
Q Consensus       268 ~~~~~~----~~~~~~~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLltG~~PF  321 (604)
                      ......    ......+||+.|||||++......|+..+|+||..+-..+.+.++.+|
T Consensus       481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            321111    012357899999999998765456888899999999999998888766


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.91  E-value=9.1e-25  Score=224.08  Aligned_cols=160  Identities=18%  Similarity=0.166  Sum_probs=122.5

Q ss_pred             CCeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCCh----------------hHHHHHHHHHHHHHHcCCCCeeE
Q 007428          113 SRYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHV----------------SDATRILREIKLLRLLRHPDIVE  176 (604)
Q Consensus       113 ~~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~----------------~~~~~~~~Ei~iL~~l~HpnIv~  176 (604)
                      ..|.+.+.||+|+||.||+|.+ .+|+.||||+++......                .....+.+|+.+|+.++|   +.
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~  165 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LA  165 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SS
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CC
Confidence            4567779999999999999999 889999999986321110                134568899999999994   55


Q ss_pred             EeeeecCCCccCcccEEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeCCCCcE
Q 007428          177 IKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL  255 (604)
Q Consensus       177 l~~~~~~~~~~~~~~l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~~~~~v  255 (604)
                      +.+++.      ....|+|||||+| +|.+ +      .......++.||+.||.|||++||+||||||+|||++ ++.+
T Consensus       166 v~~~~~------~~~~~lvmE~~~g~~L~~-l------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~v  231 (282)
T 1zar_A          166 VPKVYA------WEGNAVLMELIDAKELYR-V------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGI  231 (282)
T ss_dssp             SCCEEE------EETTEEEEECCCCEEGGG-C------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEE
T ss_pred             cCeEEe------ccceEEEEEecCCCcHHH-c------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcE
Confidence            555442      1346999999975 7876 3      2234567999999999999999999999999999999 9999


Q ss_pred             EEeeccccccccCCCCCcccccccccCcccccccccccc--------CCCCCccCchhh
Q 007428          256 KICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSF--------FSKYTPAIDIWS  306 (604)
Q Consensus       256 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~--------~~~~~~k~DIWS  306 (604)
                      ||+|||+|+.                +..|+|||++...        ...|+..+|+|.
T Consensus       232 kl~DFG~a~~----------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          232 WIIDFPQSVE----------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             EECCCTTCEE----------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             EEEECCCCeE----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence            9999999852                4458899987431        134555666664


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.85  E-value=1.7e-21  Score=196.87  Aligned_cols=139  Identities=17%  Similarity=0.149  Sum_probs=108.8

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcE--EEEEEeccccCCh----------------------hHHHHHHHHHHHHHHc
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGER--VAIKKINDVFEHV----------------------SDATRILREIKLLRLL  169 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~--vAIK~i~~~~~~~----------------------~~~~~~~~Ei~iL~~l  169 (604)
                      -|.+.+.||+|+||.||+|.+..+|+.  ||||+++......                      .....+.+|+.+|+.|
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            488999999999999999998778999  9999875321110                      1123578999999999


Q ss_pred             CCCCe--eEEeeeecCCCccCcccEEEEEecccc------cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCCccc
Q 007428          170 RHPDI--VEIKHIMLPPSRREFKDIYVVFELMES------DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH-TANVFHR  240 (604)
Q Consensus       170 ~HpnI--v~l~~~~~~~~~~~~~~l~lV~E~~~g------~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH-~~gIiHr  240 (604)
                      .|++|  ..++.+         ...||||||+++      .|.++...   +++..+..++.||+.||.||| +.||+||
T Consensus       128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHr  195 (258)
T 1zth_A          128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHA  195 (258)
T ss_dssp             HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECS
T ss_pred             HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence            88764  333322         235899999953      56665432   346678899999999999999 9999999


Q ss_pred             cCCCCCeeeCCCCcEEEeeccccccc
Q 007428          241 DLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       241 DLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                      ||||+|||++.  .++|+|||+|...
T Consensus       196 Dlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          196 DLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCHHHEEEcC--cEEEEECcccccC
Confidence            99999999988  9999999999753


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.71  E-value=6.4e-18  Score=179.66  Aligned_cols=135  Identities=16%  Similarity=0.171  Sum_probs=96.1

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEecccc---CC---------hhHHHH--------HHHHHHHHHHcCCCC
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVF---EH---------VSDATR--------ILREIKLLRLLRHPD  173 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~---~~---------~~~~~~--------~~~Ei~iL~~l~Hpn  173 (604)
                      -|.+.+.||.|+||.||+|.+. +|+.||||+++...   ..         ......        ..+|...|.+|.+.+
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4899999999999999999874 79999999875211   00         000111        234666666665444


Q ss_pred             ee--EEeeeecCCCccCcccEEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC
Q 007428          174 IV--EIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN  250 (604)
Q Consensus       174 Iv--~l~~~~~~~~~~~~~~l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~  250 (604)
                      +.  ..+++         ...+|||||++| .|.++      ...+.+..++.||+.+|.|||.+|||||||||.|||++
T Consensus       175 v~vp~p~~~---------~~~~LVME~i~G~~L~~l------~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          175 FPVPEPIAQ---------SRHTIVMSLVDALPMRQV------SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIR  239 (397)
T ss_dssp             CSCCCEEEE---------ETTEEEEECCSCEEGGGC------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             CCCCeeeec---------cCceEEEEecCCccHhhh------cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEe
Confidence            32  11111         123799999986 45432      22345567899999999999999999999999999998


Q ss_pred             CCC----------cEEEeeccccc
Q 007428          251 ADC----------KLKICDFGLAR  264 (604)
Q Consensus       251 ~~~----------~vKL~DFGla~  264 (604)
                      .++          .+.|+||+-+.
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCE
T ss_pred             CCCCcccccccccceEEEEeCCcc
Confidence            877          38999999653


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25  E-value=2.1e-11  Score=122.04  Aligned_cols=137  Identities=13%  Similarity=0.100  Sum_probs=104.6

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCcccE
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      .|++...+|.|+++.||++..  .+..|++|.......  .....+.+|+.+|+.|. +..+.++++++..     ....
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~-----~~~~   85 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERH-----DGWS   85 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEE
T ss_pred             cceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----CCce
Confidence            588999999999999999964  368899999864221  12235788999999985 6677788877632     3457


Q ss_pred             EEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 007428          193 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-------------------------------------  234 (604)
Q Consensus       193 ~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~-------------------------------------  234 (604)
                      |+||||++| +|.+.+     .+......++.+++++|..||+                                     
T Consensus        86 ~lv~e~i~G~~l~~~~-----~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEY-----EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEEECCSSEEHHHHC-----CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEEEEecCCeehhhcc-----CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            999999997 565542     1223345788999999999998                                     


Q ss_pred             ----------------------CCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          235 ----------------------ANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       235 ----------------------~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                                            ..++|+|++|.|||++.+..+.|+||+.+.
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                  448999999999999865556799999774


No 257
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.10  E-value=9.3e-11  Score=120.45  Aligned_cols=183  Identities=19%  Similarity=0.277  Sum_probs=118.4

Q ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCC--eeEEeeeecCCCccCcccEEEE
Q 007428          119 EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPD--IVEIKHIMLPPSRREFKDIYVV  195 (604)
Q Consensus       119 ~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-Hpn--Iv~l~~~~~~~~~~~~~~l~lV  195 (604)
                      +.++.|.+..||++.     ..+++|+...    ......+.+|+.+|+.+. +..  +.+++......  ......|+|
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~--~~~~~~~~v   94 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS--ETYQMSFAG   94 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC--SSCSCSCEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--CCCCcceEE
Confidence            559999999999872     4688998642    234567889999999884 332  33343332211  122335899


Q ss_pred             Eecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 007428          196 FELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT----------------------------------------  234 (604)
Q Consensus       196 ~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~----------------------------------------  234 (604)
                      |++++| .|.....  ..++.++...++.|++..|..||+                                        
T Consensus        95 m~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           95 FTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             EECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             EcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            999997 3433222  347778888888888888888886                                        


Q ss_pred             ------------------CCCccccCCCCCeeeCC--CCcEEEeeccccccccCCCCCcccccccccCccc---cccccc
Q 007428          235 ------------------ANVFHRDLKPKNILANA--DCKLKICDFGLARVSFNDAPSAIFWTDYVATRWY---RAPELC  291 (604)
Q Consensus       235 ------------------~gIiHrDLKp~NILl~~--~~~vKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y---~APE~l  291 (604)
                                        ..++|+|++|.|||++.  ...+.|+||+.+.......       +......+   ..|+.+
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~~  245 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-------DFISLMEDDEEYGMEFV  245 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-------HHHTTCCTTTSCCHHHH
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-------HHHHHHhhccccCHHHH
Confidence                              13699999999999998  4567899999987532110       11111111   233321


Q ss_pred             cccCCCCC------------ccCchhhHHHHHHHHHhCCCCC
Q 007428          292 GSFFSKYT------------PAIDIWSIGCIFAEMLTGKPLF  321 (604)
Q Consensus       292 ~~~~~~~~------------~k~DIWSlGvil~eLltG~~PF  321 (604)
                      ......|.            ...+.|++|.++|.+.+|.++|
T Consensus       246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            11101111            1258999999999999998776


No 258
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.10  E-value=1.1e-10  Score=115.80  Aligned_cols=132  Identities=14%  Similarity=0.073  Sum_probs=93.1

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC--eeEEeeeecCCCccCccc
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD--IVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~~~~~~~~~~~~~~  191 (604)
                      .|.+..+.+.|..+.||++.. .+|..|++|.....     ....+.+|+.+|+.+.+.+  +.+++.+....     ..
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~-----~~   89 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEA-----GR   89 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS-----SC
T ss_pred             CCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC-----CC
Confidence            455555445666799999954 56788999987542     1234678999999986544  45577765332     34


Q ss_pred             EEEEEecccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------
Q 007428          192 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN----------------------------------  236 (604)
Q Consensus       192 l~lV~E~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~g----------------------------------  236 (604)
                      .|+||||++| .| . .   ....   ...++.++++.|..||+..                                  
T Consensus        90 ~~~v~e~i~G~~l-~-~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (264)
T 1nd4_A           90 DWLLLGEVPGQDL-L-S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE  161 (264)
T ss_dssp             EEEEEECCSSEET-T-T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred             CEEEEEecCCccc-C-c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence            7999999997 44 2 1   1122   2356777778888888643                                  


Q ss_pred             ------------------------CccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          237 ------------------------VFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       237 ------------------------IiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                                              ++|+|++|.|||++.++.+.|+|||.+.
T Consensus       162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                    9999999999999876656799999875


No 259
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.98  E-value=1.1e-09  Score=115.03  Aligned_cols=142  Identities=15%  Similarity=0.234  Sum_probs=102.3

Q ss_pred             EeeEeeecCceEEEEEEECCCCcEEEEEEec--cccCChhHHHHHHHHHHHHHHcC--CCCeeEEeeeecCCCccCcccE
Q 007428          117 IQEVIGKGSYGVVGSAVDTHTGERVAIKKIN--DVFEHVSDATRILREIKLLRLLR--HPDIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       117 i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~--~~~~~~~~~~~~~~Ei~iL~~l~--HpnIv~l~~~~~~~~~~~~~~l  192 (604)
                      .++.|+.|.++.||++...  +..+++|+..  ... .......+.+|+.+|+.|.  +..+.+++.++....  .....
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCe
Confidence            4677999999999998653  4678888764  211 1122346788999999997  455777877764431  12447


Q ss_pred             EEEEeccccc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 007428          193 YVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-------------------------------------  234 (604)
Q Consensus       193 ~lV~E~~~g~-L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~-------------------------------------  234 (604)
                      |+||||++|. +.+.  ....+++.....++.+++++|..||.                                     
T Consensus       117 ~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             EEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            9999999974 3221  12347788888999999999999997                                     


Q ss_pred             ---------------------CCCccccCCCCCeeeCCCCc--EEEeecccccc
Q 007428          235 ---------------------ANVFHRDLKPKNILANADCK--LKICDFGLARV  265 (604)
Q Consensus       235 ---------------------~gIiHrDLKp~NILl~~~~~--vKL~DFGla~~  265 (604)
                                           ..+||+|++|.|||++.++.  +.|+||+.+..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                 35899999999999997753  68999999875


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.75  E-value=3e-08  Score=102.59  Aligned_cols=131  Identities=18%  Similarity=0.234  Sum_probs=95.6

Q ss_pred             EEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCC--C--CeeEEeeeecCCCccCccc
Q 007428          116 QIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRH--P--DIVEIKHIMLPPSRREFKD  191 (604)
Q Consensus       116 ~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~H--p--nIv~l~~~~~~~~~~~~~~  191 (604)
                      .-.+.|+.|....||++     |..+++|+...    ......+.+|..+|+.|.+  .  .+.+++++         ..
T Consensus        40 ~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~  101 (320)
T 3r70_A           40 NELRYLSSGDDSDTFLC-----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD  101 (320)
T ss_dssp             SCEEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred             EEEEeCCCCCCceEEEE-----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence            34678999999999998     66788997642    2224568899999999976  1  23344333         12


Q ss_pred             EEEEEeccccc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------
Q 007428          192 IYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN----------------------------------  236 (604)
Q Consensus       192 l~lV~E~~~g~-L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~g----------------------------------  236 (604)
                      .|+||||++|. +....  ...++..+...++.+++..|..||+..                                  
T Consensus       102 ~~lvme~i~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (320)
T 3r70_A          102 RFNIMKYIKGERITYEQ--YHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ  179 (320)
T ss_dssp             SCEEEECCCCBCCCHHH--HTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEeecCCccccccc--cccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence            48999999973 43222  234677777788888888888888532                                  


Q ss_pred             -----------------------------CccccCCCCCeeeCCCCcEEEeeccccccc
Q 007428          237 -----------------------------VFHRDLKPKNILANADCKLKICDFGLARVS  266 (604)
Q Consensus       237 -----------------------------IiHrDLKp~NILl~~~~~vKL~DFGla~~~  266 (604)
                                                   ++|+|++|.|||++.++.+.|+||+.+...
T Consensus       180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                         399999999999998656799999998653


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.39  E-value=2.7e-06  Score=87.40  Aligned_cols=133  Identities=22%  Similarity=0.218  Sum_probs=89.3

Q ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCC---CeeEEeeeecCCCccCcccEEE
Q 007428          118 QEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDIYV  194 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hp---nIv~l~~~~~~~~~~~~~~l~l  194 (604)
                      ++.++.|....||+.     |..+++|+...    ......+.+|+.+|+.|.+.   .+.+++.+...    .....|+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~   90 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFV   90 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEE
Confidence            456889999999998     56788887532    23456788999999999753   24444444421    1234689


Q ss_pred             EEeccccc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------------------------------------
Q 007428          195 VFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA--------------------------------------  235 (604)
Q Consensus       195 V~E~~~g~-L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~--------------------------------------  235 (604)
                      |||+++|. |.....  ..++......++.++.+.|..||+.                                      
T Consensus        91 v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~  168 (306)
T 3tdw_A           91 GYRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL  168 (306)
T ss_dssp             EEECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred             EEeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence            99999973 433211  2244555555555555555555532                                      


Q ss_pred             ----------------------CCccccCCCCCeeeCC---CCcE-EEeecccccc
Q 007428          236 ----------------------NVFHRDLKPKNILANA---DCKL-KICDFGLARV  265 (604)
Q Consensus       236 ----------------------gIiHrDLKp~NILl~~---~~~v-KL~DFGla~~  265 (604)
                                            .++|+|++|.|||++.   ++.+ .|+||+.+..
T Consensus       169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                                  3599999999999987   4665 8999998865


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.27  E-value=1e-05  Score=80.71  Aligned_cols=131  Identities=18%  Similarity=0.203  Sum_probs=87.1

Q ss_pred             EeeecCce-EEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCcccEEEEEe
Q 007428          120 VIGKGSYG-VVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKDIYVVFE  197 (604)
Q Consensus       120 ~LG~G~fG-~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~~~l~lV~E  197 (604)
                      .+..|..| .||+......+..+.+|.-..     .....+.+|..+|+.|. +--+.+++.++..     ...-|+|||
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme  100 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTT  100 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEE
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEE
Confidence            45556555 699987777778899997642     34566789999999885 3235566666532     245799999


Q ss_pred             cccc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-----------------------------------------
Q 007428          198 LMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-----------------------------------------  235 (604)
Q Consensus       198 ~~~g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~-----------------------------------------  235 (604)
                      +++| .+.+.....    ......+..++...|.-||..                                         
T Consensus       101 ~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (272)
T 4gkh_A          101 AIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV  176 (272)
T ss_dssp             CCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred             eeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence            9987 444433221    122233444555555555521                                         


Q ss_pred             -----------------CCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          236 -----------------NVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       236 -----------------gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                                       .++|+|+.|.|||++.++.+-|+||+.+.
T Consensus       177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                             16899999999999877667799999875


No 263
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.16  E-value=7.9e-06  Score=86.71  Aligned_cols=77  Identities=17%  Similarity=0.071  Sum_probs=48.2

Q ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeccccC--C---hhHHHHHHHHHHHHHHcCC--CC-eeEEeeeecCCCccCc
Q 007428          118 QEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFE--H---VSDATRILREIKLLRLLRH--PD-IVEIKHIMLPPSRREF  189 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~--~---~~~~~~~~~Ei~iL~~l~H--pn-Iv~l~~~~~~~~~~~~  189 (604)
                      .+.||.|.++.||++....++..|+||.......  .   .....++..|+.+|+.+..  |. +.+++.+..       
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~-------  107 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT-------  107 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET-------
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC-------
Confidence            5679999999999997665678899998643211  0   0123456789999988742  33 345554321       


Q ss_pred             ccEEEEEecccc
Q 007428          190 KDIYVVFELMES  201 (604)
Q Consensus       190 ~~l~lV~E~~~g  201 (604)
                      ...++|||++++
T Consensus       108 ~~~~lvmE~l~g  119 (397)
T 2olc_A          108 EMAVTVMEDLSH  119 (397)
T ss_dssp             TTTEEEECCCTT
T ss_pred             CccEEEEEeCCC
Confidence            124899999975


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.15  E-value=8.4e-06  Score=85.84  Aligned_cols=74  Identities=11%  Similarity=0.004  Sum_probs=52.7

Q ss_pred             eEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC--eeEEeeeecCCCccCcccE
Q 007428          115 YQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD--IVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       115 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~~~~~~~~~~~~~~l  192 (604)
                      ..-.+.|+.|....||+...  .+..+++|.....       ..+.+|+.+|+.|....  +.+++.+.....    ...
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~  109 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLT  109 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCE
T ss_pred             CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCe
Confidence            44567799999999999864  5788999977421       24788999999987533  345555443221    357


Q ss_pred             EEEEecccc
Q 007428          193 YVVFELMES  201 (604)
Q Consensus       193 ~lV~E~~~g  201 (604)
                      |+||||++|
T Consensus       110 ~lv~e~l~G  118 (362)
T 3ovc_A          110 YCISRRAQG  118 (362)
T ss_dssp             EEEEECCCS
T ss_pred             EEEEEecCC
Confidence            999999985


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.03  E-value=2.1e-05  Score=80.77  Aligned_cols=30  Identities=20%  Similarity=0.324  Sum_probs=27.2

Q ss_pred             CCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          235 ANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       235 ~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      ..+||+|+++.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999888899999999774


No 266
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.85  E-value=5.3e-05  Score=77.12  Aligned_cols=74  Identities=12%  Similarity=0.000  Sum_probs=54.7

Q ss_pred             EEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCC---CeeEEeeeecCCCccCcccE
Q 007428          116 QIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFKDI  192 (604)
Q Consensus       116 ~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hp---nIv~l~~~~~~~~~~~~~~l  192 (604)
                      .-.+.||.|.++.||++.. .+|..|+||+.....  ......+.+|+..|+.|.+.   .+.+++.+.         .-
T Consensus        18 ~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~   85 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR   85 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred             cceeeeCCcchhheEEEEe-CCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------Cc
Confidence            4467899999999999975 468899999864311  11234578999999999865   466776653         14


Q ss_pred             EEEEecccc
Q 007428          193 YVVFELMES  201 (604)
Q Consensus       193 ~lV~E~~~g  201 (604)
                      |+||||++|
T Consensus        86 ~lvme~l~g   94 (288)
T 3d1u_A           86 TLAMEWVDE   94 (288)
T ss_dssp             EEEEECCCC
T ss_pred             EEEEEeccc
Confidence            899999975


No 267
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.59  E-value=3.4e-05  Score=80.28  Aligned_cols=84  Identities=8%  Similarity=0.141  Sum_probs=51.3

Q ss_pred             EEeeEe-eecCceEEEEEEECC------CCcEEEEEEeccccC-ChhHHHHHHHHHHHHHHcC-C--CCeeEEeeeecCC
Q 007428          116 QIQEVI-GKGSYGVVGSAVDTH------TGERVAIKKINDVFE-HVSDATRILREIKLLRLLR-H--PDIVEIKHIMLPP  184 (604)
Q Consensus       116 ~i~~~L-G~G~fG~Vy~a~~~~------~g~~vAIK~i~~~~~-~~~~~~~~~~Ei~iL~~l~-H--pnIv~l~~~~~~~  184 (604)
                      ...+.| +.|....+|++....      ++..+++|....... .......+.+|+.+|+.|. +  -.+.+++.+....
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            345778 889999999886420      156788887643210 0001134678888888875 2  3466666665332


Q ss_pred             CccCcccEEEEEecccc
Q 007428          185 SRREFKDIYVVFELMES  201 (604)
Q Consensus       185 ~~~~~~~l~lV~E~~~g  201 (604)
                      .  .....|+|||+++|
T Consensus       103 ~--~~g~~~~v~e~l~G  117 (357)
T 3ats_A          103 D--VLGTPFFLMDYVEG  117 (357)
T ss_dssp             T--TTSSCEEEEECCCC
T ss_pred             C--ccCCceEEEEecCC
Confidence            1  11345899999986


No 268
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.43  E-value=0.00075  Score=72.05  Aligned_cols=31  Identities=16%  Similarity=0.316  Sum_probs=27.4

Q ss_pred             HCCCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          234 TANVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       234 ~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      ...++|+|++|.|||++.++ ++|+||+.+..
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            45699999999999998776 99999998864


No 269
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.30  E-value=0.0015  Score=66.26  Aligned_cols=68  Identities=13%  Similarity=-0.001  Sum_probs=41.1

Q ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCe-eEEeeeecCCCccCcccEEEEE
Q 007428          118 QEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI-VEIKHIMLPPSRREFKDIYVVF  196 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~~~~~~~~~~~~~~l~lV~  196 (604)
                      ++.|+.|....+|++      ..|++|+........   ....+|+.+++.+....+ .+++.+...       .-++|+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~~~-------~~~~v~   86 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHVDPA-------TGVMVT   86 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEECTT-------TCCEEE
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEEECC-------CCEEEE
Confidence            578999999999999      458888775321111   112468888777652222 344443311       137899


Q ss_pred             ecc-cc
Q 007428          197 ELM-ES  201 (604)
Q Consensus       197 E~~-~g  201 (604)
                      ||+ +|
T Consensus        87 e~i~~g   92 (301)
T 3dxq_A           87 RYIAGA   92 (301)
T ss_dssp             ECCTTC
T ss_pred             eecCCC
Confidence            999 64


No 270
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.98  E-value=0.0053  Score=59.52  Aligned_cols=96  Identities=19%  Similarity=0.130  Sum_probs=64.4

Q ss_pred             cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH-HHCCCccccCCCCCeeeCCCCcEEEeeccccccccCCCCCccccccc
Q 007428          202 DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDY  279 (604)
Q Consensus       202 ~L~~~i~~-~~~l~~~~~~~i~~qil~aL~yL-H~~gIiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~  279 (604)
                      +|.+++.. +.+++++++|.+++|.+.+|.-+ +.+.-..+=+-|..|++..+|.|-+.+ +.+.               
T Consensus        34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------------   97 (229)
T 2yle_A           34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------------   97 (229)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred             cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------------
Confidence            68888865 56899999999999999998776 222222344556889999999988774 2211               


Q ss_pred             ccCccccccccccccCCCCCccCchhhHHHHHHHHHh
Q 007428          280 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLT  316 (604)
Q Consensus       280 ~gT~~Y~APE~l~~~~~~~~~k~DIWSlGvil~eLlt  316 (604)
                      .....+.|||...   ...+.+.=|||||+++|.-+-
T Consensus        98 ~~~~~~~~pe~~~---~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A           98 AGEPPPVAGKLGY---SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---------CCSS---SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ccccCCCChhhcc---ccchHHHHHHHHHHHHHHHhh
Confidence            1122466888753   345667889999999999985


No 271
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.94  E-value=0.0058  Score=62.78  Aligned_cols=73  Identities=16%  Similarity=0.101  Sum_probs=53.1

Q ss_pred             EeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC---CCCeeEEeeeecCCCccCcccEE
Q 007428          117 IQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLR---HPDIVEIKHIMLPPSRREFKDIY  193 (604)
Q Consensus       117 i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~---HpnIv~l~~~~~~~~~~~~~~l~  193 (604)
                      -.+.|+.|....||+...  .+..|++|....     .....+.+|...|+.|.   ...+.+++.+...     ....|
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~-----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~  107 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINER-----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSF  107 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEG-----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEE
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCc-----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceE
Confidence            357799999999999864  467888997643     23556788999998884   2456677666532     23579


Q ss_pred             EEEecccc
Q 007428          194 VVFELMES  201 (604)
Q Consensus       194 lV~E~~~g  201 (604)
                      +||||++|
T Consensus       108 lvme~l~G  115 (312)
T 3jr1_A          108 LLLEALNK  115 (312)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeccC
Confidence            99999985


No 272
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.77  E-value=0.0059  Score=62.29  Aligned_cols=76  Identities=14%  Similarity=0.065  Sum_probs=46.0

Q ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC--eeEEeeeecCCCc--cCcccEEE
Q 007428          119 EVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD--IVEIKHIMLPPSR--REFKDIYV  194 (604)
Q Consensus       119 ~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn--Iv~l~~~~~~~~~--~~~~~l~l  194 (604)
                      ..|+ |....||++.. .+|..|++|......   .....+..|+.+++.|....  +++++..  ....  ...+..++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~---~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~  104 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFA  104 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCC---CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEE
Confidence            4566 88889998743 356679999885221   12345677888888875322  3444332  1110  11235688


Q ss_pred             EEecccc
Q 007428          195 VFELMES  201 (604)
Q Consensus       195 V~E~~~g  201 (604)
                      ||++++|
T Consensus       105 l~~~i~G  111 (328)
T 1zyl_A          105 VFPSVGG  111 (328)
T ss_dssp             EEECCCC
T ss_pred             EEEecCC
Confidence            9999986


No 273
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.69  E-value=0.0044  Score=63.08  Aligned_cols=144  Identities=13%  Similarity=0.082  Sum_probs=76.8

Q ss_pred             eEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCe--eEEeeeecCCC-ccCccc
Q 007428          115 YQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI--VEIKHIMLPPS-RREFKD  191 (604)
Q Consensus       115 Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnI--v~l~~~~~~~~-~~~~~~  191 (604)
                      ..-.+.|+.|....||++... .| .+++|.....    .....+..|+.+++.|....+  .+++....... ......
T Consensus        24 ~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~----~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~   97 (322)
T 2ppq_A           24 LTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR----VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGR   97 (322)
T ss_dssp             EEEEEEECC---EEEEEEEES-SC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTE
T ss_pred             ceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC----CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCE
Confidence            344567888988999998653 34 6889987642    112345578888887753222  33322110000 001134


Q ss_pred             EEEEEeccccc-H-----------HHH---HHh-cCCC--------CHHHHHHH---------------HHHHHHHHHHH
Q 007428          192 IYVVFELMESD-L-----------HQV---IKA-NDDL--------TPEHYQFF---------------LYQLLRGLKYI  232 (604)
Q Consensus       192 l~lV~E~~~g~-L-----------~~~---i~~-~~~l--------~~~~~~~i---------------~~qil~aL~yL  232 (604)
                      .+++|++++|. +           -..   +.. ...+        ........               -..+...+.+|
T Consensus        98 ~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l  177 (322)
T 2ppq_A           98 PAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYL  177 (322)
T ss_dssp             EEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence            68999999762 1           011   111 1111        10100000               01134455666


Q ss_pred             HH-------CCCccccCCCCCeeeCCCCcEEEeeccccc
Q 007428          233 HT-------ANVFHRDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       233 H~-------~gIiHrDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      +.       .++||+|+.+.|||++.++.+.|+||+.+.
T Consensus       178 ~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          178 AAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            53       369999999999999876556899999774


No 274
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.69  E-value=0.01  Score=59.64  Aligned_cols=75  Identities=12%  Similarity=0.002  Sum_probs=51.0

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCC---CeeEEeeeecCCCccCcc
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHP---DIVEIKHIMLPPSRREFK  190 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hp---nIv~l~~~~~~~~~~~~~  190 (604)
                      +..-++.+|.|..+.||++.. .+|+.|.+|+-.....  .....+.+|+..|+.|.--   -+.+++.+.         
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------   83 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------   83 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------
T ss_pred             CeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc---------
Confidence            355678899999999999975 5789999998643211  1123467899999988521   234444432         


Q ss_pred             cEEEEEeccc
Q 007428          191 DIYVVFELME  200 (604)
Q Consensus       191 ~l~lV~E~~~  200 (604)
                      .-++||||+.
T Consensus        84 ~~~lv~e~l~   93 (288)
T 3f7w_A           84 DRTLAMEWVD   93 (288)
T ss_dssp             TTEEEEECCC
T ss_pred             CceEEEEeec
Confidence            1378999986


No 275
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.65  E-value=0.012  Score=62.99  Aligned_cols=72  Identities=13%  Similarity=0.091  Sum_probs=47.6

Q ss_pred             EeeEeeecCceEEEEEEECC-------CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCe-eEEeeeecCCCccC
Q 007428          117 IQEVIGKGSYGVVGSAVDTH-------TGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI-VEIKHIMLPPSRRE  188 (604)
Q Consensus       117 i~~~LG~G~fG~Vy~a~~~~-------~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~~~~~~~~~~~  188 (604)
                      -++.|+.|....||++....       .+..|++|+....  .  ....+.+|+.+++.|...++ .++++.+.     +
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~-----~  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E--TESHLVAESVIFTLLSERHLGPKLYGIFS-----G  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C--CHHHHHHHHHHHHHHHHTTSSSCEEEEET-----T
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC-----C
Confidence            35678889999999997542       2578999987421  1  11345579999988853333 45665541     1


Q ss_pred             cccEEEEEecccc
Q 007428          189 FKDIYVVFELMES  201 (604)
Q Consensus       189 ~~~l~lV~E~~~g  201 (604)
                          .+||||++|
T Consensus       148 ----g~v~e~l~G  156 (429)
T 1nw1_A          148 ----GRLEEYIPS  156 (429)
T ss_dssp             ----EEEECCCCE
T ss_pred             ----CEEEEEeCC
Confidence                378999875


No 276
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.58  E-value=0.0044  Score=63.57  Aligned_cols=31  Identities=26%  Similarity=0.470  Sum_probs=26.9

Q ss_pred             CCCccccCCCCCeeeCCC----CcEEEeecccccc
Q 007428          235 ANVFHRDLKPKNILANAD----CKLKICDFGLARV  265 (604)
Q Consensus       235 ~gIiHrDLKp~NILl~~~----~~vKL~DFGla~~  265 (604)
                      ..++|+|+.+.|||++.+    +.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            369999999999999875    6799999998864


No 277
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.42  E-value=0.0054  Score=64.02  Aligned_cols=72  Identities=8%  Similarity=0.012  Sum_probs=41.0

Q ss_pred             eeEeeecCceEEEEEEECC--------CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCC-eeEEeeeecCCCccC
Q 007428          118 QEVIGKGSYGVVGSAVDTH--------TGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPD-IVEIKHIMLPPSRRE  188 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~--------~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~Hpn-Iv~l~~~~~~~~~~~  188 (604)
                      .+.|+.|....||++....        .+..|++|+......   .......|..+|+.|...+ ..++++..  .    
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~----  108 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTF--N----  108 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T----
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEec--C----
Confidence            4568888888999997542        136788887643211   1112357888888875333 33555443  1    


Q ss_pred             cccEEEEEecccc
Q 007428          189 FKDIYVVFELMES  201 (604)
Q Consensus       189 ~~~l~lV~E~~~g  201 (604)
                         -++||||++|
T Consensus       109 ---~~~v~e~i~G  118 (369)
T 3c5i_A          109 ---GGRIEEWLYG  118 (369)
T ss_dssp             ---TEEEEECCCS
T ss_pred             ---CcEEEEEecC
Confidence               1689999875


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.33  E-value=0.041  Score=59.51  Aligned_cols=72  Identities=17%  Similarity=0.186  Sum_probs=45.8

Q ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCe-eEEeeeecCCCccCcccEEEEE
Q 007428          118 QEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI-VEIKHIMLPPSRREFKDIYVVF  196 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnI-v~l~~~~~~~~~~~~~~l~lV~  196 (604)
                      ++.|+.|-...+|++.....+..|++|+.........+   ..+|..+|+.|...++ .++++++.  .       .+||
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~id---R~~E~~vl~~L~~~gl~P~ll~~~~--~-------G~v~  180 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIIN---REREKKISCILYNKNIAKKIYVFFT--N-------GRIE  180 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSC---HHHHHHHHHHHTTSSSBCCEEEEET--T-------EEEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcC---HHHHHHHHHHHHhcCCCCCEEEEeC--C-------eEEE
Confidence            56788899999999976544578889976432111111   1479999999875444 45666551  1       2499


Q ss_pred             ecccc
Q 007428          197 ELMES  201 (604)
Q Consensus       197 E~~~g  201 (604)
                      ||++|
T Consensus       181 e~I~G  185 (458)
T 2qg7_A          181 EFMDG  185 (458)
T ss_dssp             ECCCS
T ss_pred             EeeCC
Confidence            99875


No 279
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.27  E-value=0.014  Score=61.62  Aligned_cols=135  Identities=13%  Similarity=0.153  Sum_probs=78.6

Q ss_pred             eeEeeecCceEEEEEEECC-------CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCc
Q 007428          118 QEVIGKGSYGVVGSAVDTH-------TGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~-------~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~  189 (604)
                      ++.|..|-...+|++....       .+..|.+|+.....   .....+.+|..+++.|. +.-..++++++.     . 
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-----~-  125 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFP-----E-  125 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-----T-
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcC-----C-
Confidence            3567778888999987532       35789998753211   22445568999998885 322345555542     1 


Q ss_pred             ccEEEEEeccccc------H------H---HHHH---hcC-----CCC--HHHHHHHHHHHHH-----------------
Q 007428          190 KDIYVVFELMESD------L------H---QVIK---AND-----DLT--PEHYQFFLYQLLR-----------------  227 (604)
Q Consensus       190 ~~l~lV~E~~~g~------L------~---~~i~---~~~-----~l~--~~~~~~i~~qil~-----------------  227 (604)
                         .+||||++|.      +      .   ..+.   ...     ...  +..+..++.++..                 
T Consensus       126 ---g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l  202 (379)
T 3feg_A          126 ---GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL  202 (379)
T ss_dssp             ---EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred             ---ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence               2899999751      1      1   1111   111     111  3455556554422                 


Q ss_pred             --HHHHHH----HC----CCccccCCCCCeeeCCC----CcEEEeeccccc
Q 007428          228 --GLKYIH----TA----NVFHRDLKPKNILANAD----CKLKICDFGLAR  264 (604)
Q Consensus       228 --aL~yLH----~~----gIiHrDLKp~NILl~~~----~~vKL~DFGla~  264 (604)
                        .+..|.    ..    .++|+|+.+.|||++.+    +.+.|+||..|.
T Consensus       203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence              234443    22    48999999999999876    789999999775


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.86  E-value=0.017  Score=59.64  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=27.1

Q ss_pred             CCccccCCCCCeeeCCCCcEEEeecccccc
Q 007428          236 NVFHRDLKPKNILANADCKLKICDFGLARV  265 (604)
Q Consensus       236 gIiHrDLKp~NILl~~~~~vKL~DFGla~~  265 (604)
                      .++|+|+.+.|||++.++.+.|+||+.+..
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            589999999999999888899999987764


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.45  E-value=0.053  Score=57.51  Aligned_cols=29  Identities=31%  Similarity=0.359  Sum_probs=25.8

Q ss_pred             CCccccCCCCCeeeCCC------CcEEEeeccccc
Q 007428          236 NVFHRDLKPKNILANAD------CKLKICDFGLAR  264 (604)
Q Consensus       236 gIiHrDLKp~NILl~~~------~~vKL~DFGla~  264 (604)
                      .++|+|+.+.|||++.+      +.+.|+||..|.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            48999999999999877      789999998774


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.01  E-value=0.082  Score=56.50  Aligned_cols=72  Identities=13%  Similarity=0.008  Sum_probs=44.2

Q ss_pred             eeEeeecCceEEEEEEECC-------CCcEEEEEEeccccCChhHHHHHHHHHHHHHHcC-CCCeeEEeeeecCCCccCc
Q 007428          118 QEVIGKGSYGVVGSAVDTH-------TGERVAIKKINDVFEHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREF  189 (604)
Q Consensus       118 ~~~LG~G~fG~Vy~a~~~~-------~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~-HpnIv~l~~~~~~~~~~~~  189 (604)
                      ++.|..|-...+|++....       .+..|++++.........+   ..+|..+++.|. +.-..++++.+.       
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~id---R~~E~~~l~~L~~~gi~P~l~~~~~-------  144 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYD---SKVELDVFRYLSNINIAPNIIADFP-------  144 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCC---HHHHHHHHHHHHHTTSSCCEEEEET-------
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcC---HHHHHHHHHHHHhcCCCCCEEEEcC-------
Confidence            4567778888999997642       1578999886432111111   247888888875 222344444331       


Q ss_pred             ccEEEEEecccc
Q 007428          190 KDIYVVFELMES  201 (604)
Q Consensus       190 ~~l~lV~E~~~g  201 (604)
                        -++||||++|
T Consensus       145 --~~~I~efI~G  154 (424)
T 3mes_A          145 --EGRIEEFIDG  154 (424)
T ss_dssp             --TEEEEECCCS
T ss_pred             --CCEEEEEeCC
Confidence              1789999975


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.39  E-value=0.76  Score=48.32  Aligned_cols=29  Identities=31%  Similarity=0.421  Sum_probs=24.7

Q ss_pred             CccccCCCCCeee------CCCCcEEEeecccccc
Q 007428          237 VFHRDLKPKNILA------NADCKLKICDFGLARV  265 (604)
Q Consensus       237 IiHrDLKp~NILl------~~~~~vKL~DFGla~~  265 (604)
                      ++|.|+.+.|||+      +.+..+.|+||-+|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6899999999998      4567799999998753


No 284
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.46  E-value=0.065  Score=57.97  Aligned_cols=62  Identities=16%  Similarity=0.119  Sum_probs=16.9

Q ss_pred             EeeEeeecCceEEEEEEECCCCcEEEE------EEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeeee
Q 007428          117 IQEVIGKGSYGVVGSAVDTHTGERVAI------KKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIM  181 (604)
Q Consensus       117 i~~~LG~G~fG~Vy~a~~~~~g~~vAI------K~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~~  181 (604)
                      +.+.||   ||.||++........|||      |..+...........+.+|..+++.++|||+++.+.+.
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~  213 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK  213 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence            345676   999999987655568898      76653222333345678899999999999999987765


No 285
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=38.28  E-value=14  Score=35.43  Aligned_cols=68  Identities=16%  Similarity=0.061  Sum_probs=47.3

Q ss_pred             cEEEEEeccc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHHCCCccccCCCCCeeeCCCCcEEEeecccc
Q 007428          191 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLK-YIHTANVFHRDLKPKNILANADCKLKICDFGLA  263 (604)
Q Consensus       191 ~l~lV~E~~~-g~L~~~i~~~~~l~~~~~~~i~~qil~aL~-yLH~~gIiHrDLKp~NILl~~~~~vKL~DFGla  263 (604)
                      .+.+.++.-. ..-+..++   .++....+.++.+|+.... ++  ..-+|-=|.|+||+++.++.++|.-.|+-
T Consensus        62 ~~~i~y~~~~~~~~f~~i~---~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A           62 EVKVVIKPPSSFLTFAAIR---KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             EEEEEEECCTTCEEHHHHH---TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTTCCEEESCCEET
T ss_pred             EEEEEEEcCcccCcHHHHH---hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence            3555555543 22233332   4778888888888877555 44  34577789999999999999999988864


No 286
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=32.84  E-value=1.3e+02  Score=32.68  Aligned_cols=139  Identities=16%  Similarity=0.195  Sum_probs=87.1

Q ss_pred             EeeecCceEEEEEEECCCCcEEEEEEeccccCChhH--HHHHHHHHHHHHHcCCCCeeEEeeee------cCC-------
Q 007428          120 VIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSD--ATRILREIKLLRLLRHPDIVEIKHIM------LPP-------  184 (604)
Q Consensus       120 ~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~--~~~~~~Ei~iL~~l~HpnIv~l~~~~------~~~-------  184 (604)
                      +|.-|--|-|-.+... -+-.++.|+|++.+...++  .+.+..-..+.+  +|.-+=++.+..      ++.       
T Consensus       313 i~APGikGmVM~VFTL-PSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eL  389 (578)
T 3eps_A          313 IEAPGIRGMVMLVFTL-PGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPAL  389 (578)
T ss_dssp             EECSSCCCSSEEEEEC-TTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHH
T ss_pred             EECCCCCceEEEEEcC-CCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHH
Confidence            4778999999888764 4667899999987664443  233333333333  244443332221      000       


Q ss_pred             ----------CccC-cccEEEEEeccc---ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCeeeC
Q 007428          185 ----------SRRE-FKDIYVVFELME---SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN  250 (604)
Q Consensus       185 ----------~~~~-~~~l~lV~E~~~---g~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NILl~  250 (604)
                                .-+. ...+.|=-=|++   .-|.-+|..   -+++++...+.+--.|++-|-..+|+-+|+=..|.=|+
T Consensus       390 L~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~---a~~~~~~~av~eYG~AIKqLAaANIFPGDML~KNFGVT  466 (578)
T 3eps_A          390 MELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQ---VEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVT  466 (578)
T ss_dssp             HHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHH---CCTHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred             HHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhh---CCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCCcc
Confidence                      0000 111111111122   234334433   36778888999999999999999999999999999999


Q ss_pred             CCCcEEEeeccccc
Q 007428          251 ADCKLKICDFGLAR  264 (604)
Q Consensus       251 ~~~~vKL~DFGla~  264 (604)
                      ..|+|..-|+.-..
T Consensus       467 RhgRVVFYDYDEI~  480 (578)
T 3eps_A          467 RHGRVVFYDYDEIC  480 (578)
T ss_dssp             TTCCEEECCGGGCE
T ss_pred             ccceEEEeccccee
Confidence            99999999997543


No 287
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=29.04  E-value=15  Score=21.37  Aligned_cols=11  Identities=45%  Similarity=1.011  Sum_probs=8.5

Q ss_pred             cchhhhhhhhc
Q 007428            6 TLVDGVRRWFQ   16 (604)
Q Consensus         6 ~~~~~~~~~~~   16 (604)
                      +-||+|+||+.
T Consensus         5 ~qvDSV~rWme   15 (22)
T 3ro3_B            5 MQVDSVQRWME   15 (26)
T ss_pred             hhhHHHHHHHH
Confidence            45899999964


No 288
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=28.04  E-value=2.9e+02  Score=28.03  Aligned_cols=140  Identities=15%  Similarity=0.150  Sum_probs=72.6

Q ss_pred             CeEEeeEeeecCceEEEEEEECCCCcEEEEEEeccccCChhHHHHHHHHHHHHHHcCCCCeeEEeee------------e
Q 007428          114 RYQIQEVIGKGSYGVVGSAVDTHTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHI------------M  181 (604)
Q Consensus       114 ~Y~i~~~LG~G~fG~Vy~a~~~~~g~~vAIK~i~~~~~~~~~~~~~~~Ei~iL~~l~HpnIv~l~~~------------~  181 (604)
                      ..+.++..-.|..|.++.+.   ++..|.||-..     ....+.+-.++...-.+.-|+..-+.-.            .
T Consensus        70 ~v~~I~~s~~Gstgvff~~t---d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~  141 (342)
T 1cja_A           70 QFKGIERSEKGTEGLFFVET---ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAA  141 (342)
T ss_dssp             GEEEEEECCSTTSCEEEEEE---SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHH
T ss_pred             CeeEEEeccCCCCCeEEEEe---CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHH
Confidence            37777878788777665554   47788899442     1122233334444444566664332211            0


Q ss_pred             cCCCc-----cCcccEEEEEecccc-cHHHHHHh--cCCCCHHHHHHHHHHH--HHHHHHHHHCC----C-ccccCCCCC
Q 007428          182 LPPSR-----REFKDIYVVFELMES-DLHQVIKA--NDDLTPEHYQFFLYQL--LRGLKYIHTAN----V-FHRDLKPKN  246 (604)
Q Consensus       182 ~~~~~-----~~~~~l~lV~E~~~g-~L~~~i~~--~~~l~~~~~~~i~~qi--l~aL~yLH~~g----I-iHrDLKp~N  246 (604)
                      .....     ...+...++|+|..| .|...-..  ...+.+    ..+.++  +-+++++..+.    . .+.--.|+|
T Consensus       142 ~~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~N  217 (342)
T 1cja_A          142 IDKSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDN  217 (342)
T ss_dssp             HCSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGG
T ss_pred             hhhhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhh
Confidence            00100     112246799999985 22211000  001222    223333  34566666553    1 111257889


Q ss_pred             eeeCCCCc-EEEeecccccc
Q 007428          247 ILANADCK-LKICDFGLARV  265 (604)
Q Consensus       247 ILl~~~~~-vKL~DFGla~~  265 (604)
                      ||+..++. +.++|-+++..
T Consensus       218 IL~~~~n~~~~~IDhn~af~  237 (342)
T 1cja_A          218 IMLSERGATVVPIDSKIIPL  237 (342)
T ss_dssp             EEEESBTTCEEECSCCCCCC
T ss_pred             eEEeCCCCeEEEEcCCcccc
Confidence            99887555 88999998853


No 289
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=25.00  E-value=34  Score=38.46  Aligned_cols=25  Identities=32%  Similarity=0.360  Sum_probs=23.0

Q ss_pred             ccCCCCCeeeCCCCcEEEeeccccc
Q 007428          240 RDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       240 rDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      +|=.++||||+.+|++.=+|||.+-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            5889999999999999999999873


No 290
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=20.61  E-value=98  Score=36.18  Aligned_cols=25  Identities=28%  Similarity=0.295  Sum_probs=22.7

Q ss_pred             ccCCCCCeeeCCCCcEEEeeccccc
Q 007428          240 RDLKPKNILANADCKLKICDFGLAR  264 (604)
Q Consensus       240 rDLKp~NILl~~~~~vKL~DFGla~  264 (604)
                      +|=.++||||+.+|++.=+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            6889999999999999999999874


No 291
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=20.18  E-value=48  Score=31.58  Aligned_cols=83  Identities=11%  Similarity=0.163  Sum_probs=55.1

Q ss_pred             CCCCeeEEeeeecCCCccCcccEEEEEeccc-c-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCe
Q 007428          170 RHPDIVEIKHIMLPPSRREFKDIYVVFELME-S-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI  247 (604)
Q Consensus       170 ~HpnIv~l~~~~~~~~~~~~~~l~lV~E~~~-g-~L~~~i~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKp~NI  247 (604)
                      .||+++.. .+-     .....+.+.++.-+ + ++.. +   ..++....+.++.+|+....+++  .-+|-=|.|+||
T Consensus        43 ~~~~Fl~~-~I~-----e~eD~v~~~y~~~~~~~~f~~-i---k~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL  110 (215)
T 4ann_A           43 HSPYFIDA-ELT-----ELRDSFQIHYDINDNHTPFDN-I---KSFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDEL  110 (215)
T ss_dssp             CCTTBCCE-EEE-----ECSSEEEEEECCCTTSEEGGG-G---GGSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGE
T ss_pred             cCCcccce-EEE-----EcccEEEEEEEcCcccCCHHH-H---HhcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceE
Confidence            57887754 232     12223555555443 2 2222 2   24677888889999888774443  347778999999


Q ss_pred             eeCCCCcEEEeeccccc
Q 007428          248 LANADCKLKICDFGLAR  264 (604)
Q Consensus       248 Ll~~~~~vKL~DFGla~  264 (604)
                      +++.++.++|.-.|+-.
T Consensus       111 ~f~~~~~p~i~~RGik~  127 (215)
T 4ann_A          111 FFTRDGLPIAKTRGLQN  127 (215)
T ss_dssp             EECTTSCEEESCCEETT
T ss_pred             EEcCCCCEEEEEccCcc
Confidence            99999999999888643


Done!